HEADER TRANSLATION 31-DEC-69 3JAQ TITLE Structure of a partial yeast 48S preinitiation complex in open TITLE 2 conformation COMPND MOL_ID: 40; COMPND 2 MOLECULE: eIF2 gamma; COMPND 3 CHAIN: k; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO k 153 REMARK 465 THR k 154 REMARK 465 CYS k 155 REMARK 465 PRO k 156 REMARK 465 GLU k 157 REMARK 465 PRO k 158 REMARK 465 ASP k 159 REMARK 465 CYS k 160 REMARK 465 TYR k 161 REMARK 465 ARG k 162 REMARK 465 SER k 163 REMARK 465 PHE k 164 REMARK 465 LYS k 165 REMARK 465 SER k 166 REMARK 465 ASP k 167 REMARK 465 LYS k 168 DBREF 3JAQ k 1 527 UNP P32481 IF2G_YEAST 1 527 MODRES 3JAQ 1MG 9 G 1N-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 3JAQ 2MG 10 G 2N-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 3JAQ H2U 16 U 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE MODRES 3JAQ M2G 25 G N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 3JAQ T6A 36 A MODRES 3JAQ 7MG 45 G MODRES 3JAQ H2U 46 U 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE MODRES 3JAQ 5MC 47 C 5-METHYLCYTIDINE-5'-MONOPHOSPHATE MODRES 3JAQ 5MC 48 C 5-METHYLCYTIDINE-5'-MONOPHOSPHATE MODRES 3JAQ 1MA 57 A MODRES 3JAQ RIA 63 A SEQRES 1 k 42 LYS ILE TYR LYS CYS GLN GLU PRO THR CYS PRO GLU PRO SEQRES 2 k 42 ASP CYS TYR ARG SER PHE LYS SER ASP LYS GLU ILE SER SEQRES 3 k 42 PRO LYS CYS GLN ARG PRO GLY CYS PRO GLY ARG TYR LYS SEQRES 4 k 42 LEU VAL ARG ATOM 1 N LYS k 146 237.506 106.893 161.961 1.00 50.00 ATOM 2 CA LYS k 146 238.249 105.991 161.076 1.00 50.00 ATOM 3 C LYS k 146 238.445 106.617 159.697 1.00 50.00 ATOM 4 O LYS k 146 237.498 107.160 159.115 1.00 50.00 ATOM 5 CB LYS k 146 237.530 104.645 160.941 1.00 50.00 ATOM 6 CG LYS k 146 237.894 103.622 162.004 1.00 50.00 ATOM 7 CD LYS k 146 237.282 102.265 161.695 1.00 50.00 ATOM 8 CE LYS k 146 237.860 101.176 162.585 1.00 50.00 ATOM 9 NZ LYS k 146 237.324 99.832 162.235 1.00 50.00 ATOM 10 N ILE k 147 239.675 106.543 159.187 1.00 50.00 ATOM 11 CA ILE k 147 239.994 107.051 157.849 1.00 50.00 ATOM 12 C ILE k 147 239.714 105.968 156.801 1.00 50.00 ATOM 13 O ILE k 147 240.530 105.063 156.579 1.00 50.00 ATOM 14 CB ILE k 147 241.447 107.600 157.727 1.00 50.00 ATOM 15 CG1 ILE k 147 241.770 108.580 158.865 1.00 50.00 ATOM 16 CG2 ILE k 147 241.652 108.276 156.371 1.00 50.00 ATOM 17 CD1 ILE k 147 243.251 108.771 159.130 1.00 50.00 ATOM 18 N TYR k 148 238.534 106.062 156.190 1.00 50.00 ATOM 19 CA TYR k 148 238.159 105.232 155.049 1.00 50.00 ATOM 20 C TYR k 148 238.367 106.038 153.767 1.00 50.00 ATOM 21 O TYR k 148 237.866 107.160 153.643 1.00 50.00 ATOM 22 CB TYR k 148 236.706 104.757 155.172 1.00 50.00 ATOM 23 CG TYR k 148 236.498 103.590 156.119 1.00 50.00 ATOM 24 CD1 TYR k 148 236.711 102.270 155.696 1.00 50.00 ATOM 25 CD2 TYR k 148 236.074 103.801 157.438 1.00 50.00 ATOM 26 CE1 TYR k 148 236.515 101.197 156.562 1.00 50.00 ATOM 27 CE2 TYR k 148 235.874 102.733 158.309 1.00 50.00 ATOM 28 CZ TYR k 148 236.099 101.436 157.868 1.00 50.00 ATOM 29 OH TYR k 148 235.903 100.379 158.728 1.00 50.00 ATOM 30 N LYS k 149 239.116 105.464 152.827 1.00 50.00 ATOM 31 CA LYS k 149 239.525 106.172 151.609 1.00 50.00 ATOM 32 C LYS k 149 238.584 105.962 150.424 1.00 50.00 ATOM 33 O LYS k 149 238.015 104.878 150.255 1.00 50.00 ATOM 34 CB LYS k 149 240.958 105.794 151.218 1.00 50.00 ATOM 35 CG LYS k 149 242.032 106.511 152.021 1.00 50.00 ATOM 36 CD LYS k 149 243.416 106.246 151.451 1.00 50.00 ATOM 37 CE LYS k 149 244.476 107.049 152.186 1.00 50.00 ATOM 38 NZ LYS k 149 245.834 106.822 151.620 1.00 50.00 ATOM 39 N CYS k 150 238.431 107.014 149.618 1.00 50.00 ATOM 40 CA CYS k 150 237.691 106.951 148.358 1.00 50.00 ATOM 41 C CYS k 150 238.607 106.393 147.269 1.00 50.00 ATOM 42 O CYS k 150 239.628 107.003 146.930 1.00 50.00 ATOM 43 CB CYS k 150 237.152 108.334 147.976 1.00 50.00 ATOM 44 SG CYS k 150 236.125 108.363 146.487 1.00 50.00 ATOM 45 N GLN k 151 238.233 105.228 146.738 1.00 50.00 ATOM 46 CA GLN k 151 239.068 104.482 145.789 1.00 50.00 ATOM 47 C GLN k 151 238.574 104.582 144.342 1.00 50.00 ATOM 48 O GLN k 151 239.277 105.119 143.480 1.00 50.00 ATOM 49 CB GLN k 151 239.199 103.011 146.219 1.00 50.00 ATOM 50 CG GLN k 151 240.128 102.765 147.403 1.00 50.00 ATOM 51 CD GLN k 151 241.601 102.748 147.021 1.00 50.00 ATOM 52 OE1 GLN k 151 242.021 102.004 146.133 1.00 50.00 ATOM 53 NE2 GLN k 151 242.395 103.563 147.706 1.00 50.00 ATOM 54 N GLU k 152 237.369 104.067 144.092 1.00 50.00 ATOM 55 CA GLU k 152 236.805 103.978 142.743 1.00 50.00 ATOM 56 C GLU k 152 235.891 105.161 142.439 1.00 50.00 ATOM 57 O GLU k 152 235.876 105.675 141.320 1.00 50.00 ATOM 58 CB GLU k 152 236.047 102.658 142.561 1.00 50.00 ATOM 59 CG GLU k 152 236.933 101.418 142.514 1.00 50.00 ATOM 60 CD GLU k 152 236.145 100.120 142.568 1.00 50.00 ATOM 61 OE1 GLU k 152 235.326 99.869 141.656 1.00 50.00 ATOM 62 OE2 GLU k 152 236.356 99.338 143.520 1.00 50.00 ATOM 63 N GLU k 169 236.316 110.415 154.763 1.00 50.00 ATOM 64 CA GLU k 169 235.062 109.713 155.036 1.00 50.00 ATOM 65 C GLU k 169 234.986 109.221 156.481 1.00 50.00 ATOM 66 O GLU k 169 236.007 108.866 157.083 1.00 50.00 ATOM 67 CB GLU k 169 234.878 108.531 154.078 1.00 50.00 ATOM 68 CG GLU k 169 234.592 108.909 152.631 1.00 50.00 ATOM 69 CD GLU k 169 234.576 107.708 151.701 1.00 50.00 ATOM 70 OE1 GLU k 169 235.623 107.039 151.559 1.00 50.00 ATOM 71 OE2 GLU k 169 233.515 107.439 151.101 1.00 50.00 ATOM 72 N ILE k 170 233.767 109.206 157.020 1.00 50.00 ATOM 73 CA ILE k 170 233.490 108.697 158.369 1.00 50.00 ATOM 74 C ILE k 170 232.902 107.282 158.277 1.00 50.00 ATOM 75 O ILE k 170 233.284 106.394 159.046 1.00 50.00 ATOM 76 CB ILE k 170 232.536 109.629 159.166 1.00 50.00 ATOM 77 CG1 ILE k 170 232.883 111.110 158.933 1.00 50.00 ATOM 78 CG2 ILE k 170 232.578 109.298 160.656 1.00 50.00 ATOM 79 CD1 ILE k 170 231.703 112.058 159.018 1.00 50.00 ATOM 80 N SER k 171 231.982 107.092 157.329 1.00 50.00 ATOM 81 CA SER k 171 231.320 105.808 157.081 1.00 50.00 ATOM 82 C SER k 171 232.181 104.869 156.216 1.00 50.00 ATOM 83 O SER k 171 232.928 105.348 155.355 1.00 50.00 ATOM 84 CB SER k 171 229.953 106.038 156.422 1.00 50.00 ATOM 85 OG SER k 171 230.083 106.742 155.197 1.00 50.00 ATOM 86 N PRO k 172 232.078 103.532 156.437 1.00 50.00 ATOM 87 CA PRO k 172 232.851 102.559 155.639 1.00 50.00 ATOM 88 C PRO k 172 232.330 102.304 154.207 1.00 50.00 ATOM 89 O PRO k 172 232.700 101.297 153.589 1.00 50.00 ATOM 90 CB PRO k 172 232.768 101.279 156.484 1.00 50.00 ATOM 91 CG PRO k 172 231.489 101.407 157.232 1.00 50.00 ATOM 92 CD PRO k 172 231.357 102.869 157.546 1.00 50.00 ATOM 93 N LYS k 173 231.503 103.213 153.688 1.00 50.00 ATOM 94 CA LYS k 173 230.907 103.085 152.352 1.00 50.00 ATOM 95 C LYS k 173 231.247 104.283 151.463 1.00 50.00 ATOM 96 O LYS k 173 231.229 105.431 151.922 1.00 50.00 ATOM 97 CB LYS k 173 229.385 102.914 152.457 1.00 50.00 ATOM 98 CG LYS k 173 228.940 101.600 153.085 1.00 50.00 ATOM 99 CD LYS k 173 227.527 101.697 153.637 1.00 50.00 ATOM 100 CE LYS k 173 227.186 100.482 154.484 1.00 50.00 ATOM 101 NZ LYS k 173 225.855 100.614 155.139 1.00 50.00 ATOM 102 N CYS k 174 231.552 104.003 150.193 1.00 50.00 ATOM 103 CA CYS k 174 231.906 105.037 149.210 1.00 50.00 ATOM 104 C CYS k 174 230.737 105.438 148.296 1.00 50.00 ATOM 105 O CYS k 174 230.928 105.735 147.110 1.00 50.00 ATOM 106 CB CYS k 174 233.122 104.602 148.384 1.00 50.00 ATOM 107 SG CYS k 174 234.714 104.803 149.212 1.00 50.00 ATOM 108 N GLN k 175 229.532 105.467 148.867 1.00 50.00 ATOM 109 CA GLN k 175 228.308 105.816 148.133 1.00 50.00 ATOM 110 C GLN k 175 228.134 107.329 147.917 1.00 50.00 ATOM 111 O GLN k 175 227.208 107.759 147.218 1.00 50.00 ATOM 112 CB GLN k 175 227.078 105.224 148.836 1.00 50.00 ATOM 113 CG GLN k 175 226.991 103.701 148.781 1.00 50.00 ATOM 114 CD GLN k 175 225.829 103.136 149.580 1.00 50.00 ATOM 115 OE1 GLN k 175 225.661 103.436 150.765 1.00 50.00 ATOM 116 NE2 GLN k 175 225.026 102.296 148.936 1.00 50.00 ATOM 117 N ARG k 176 229.036 108.120 148.504 1.00 50.00 ATOM 118 CA ARG k 176 228.972 109.589 148.465 1.00 50.00 ATOM 119 C ARG k 176 229.960 110.276 147.487 1.00 50.00 ATOM 120 O ARG k 176 229.504 111.020 146.611 1.00 50.00 ATOM 121 CB ARG k 176 229.080 110.182 149.882 1.00 50.00 ATOM 122 CG ARG k 176 227.864 109.943 150.770 1.00 50.00 ATOM 123 CD ARG k 176 228.250 109.773 152.234 1.00 50.00 ATOM 124 NE ARG k 176 228.745 111.010 152.846 1.00 50.00 ATOM 125 CZ ARG k 176 229.228 111.111 154.084 1.00 50.00 ATOM 126 NH1 ARG k 176 229.297 110.049 154.883 1.00 50.00 ATOM 127 NH2 ARG k 176 229.649 112.287 154.530 1.00 50.00 ATOM 128 N PRO k 177 231.296 110.037 147.618 1.00 50.00 ATOM 129 CA PRO k 177 232.206 110.824 146.774 1.00 50.00 ATOM 130 C PRO k 177 232.528 110.226 145.392 1.00 50.00 ATOM 131 O PRO k 177 233.272 110.842 144.619 1.00 50.00 ATOM 132 CB PRO k 177 233.479 110.923 147.631 1.00 50.00 ATOM 133 CG PRO k 177 233.385 109.815 148.637 1.00 50.00 ATOM 134 CD PRO k 177 232.064 109.115 148.480 1.00 50.00 ATOM 135 N GLY k 178 231.967 109.054 145.087 1.00 50.00 ATOM 136 CA GLY k 178 232.197 108.380 143.806 1.00 50.00 ATOM 137 C GLY k 178 231.444 107.071 143.660 1.00 50.00 ATOM 138 O GLY k 178 230.251 106.995 143.974 1.00 50.00 ATOM 139 N CYS k 179 232.150 106.048 143.177 1.00 50.00 ATOM 140 CA CYS k 179 231.589 104.709 142.964 1.00 50.00 ATOM 141 C CYS k 179 231.347 103.980 144.295 1.00 50.00 ATOM 142 O CYS k 179 232.232 103.977 145.158 1.00 50.00 ATOM 143 CB CYS k 179 232.502 103.881 142.053 1.00 50.00 ATOM 144 SG CYS k 179 232.705 104.549 140.385 1.00 50.00 ATOM 145 N PRO k 180 230.158 103.347 144.457 1.00 50.00 ATOM 146 CA PRO k 180 229.717 102.752 145.738 1.00 50.00 ATOM 147 C PRO k 180 230.526 101.548 146.261 1.00 50.00 ATOM 148 O PRO k 180 230.146 100.962 147.283 1.00 50.00 ATOM 149 CB PRO k 180 228.266 102.338 145.449 1.00 50.00 ATOM 150 CG PRO k 180 228.223 102.125 143.976 1.00 50.00 ATOM 151 CD PRO k 180 229.124 103.182 143.412 1.00 50.00 ATOM 152 N GLY k 181 231.615 101.195 145.574 1.00 50.00 ATOM 153 CA GLY k 181 232.511 100.105 145.984 1.00 50.00 ATOM 154 C GLY k 181 233.158 100.359 147.334 1.00 50.00 ATOM 155 O GLY k 181 233.678 101.451 147.577 1.00 50.00 ATOM 156 N ARG k 182 233.122 99.337 148.194 1.00 50.00 ATOM 157 CA ARG k 182 233.516 99.419 149.613 1.00 50.00 ATOM 158 C ARG k 182 234.837 100.137 149.888 1.00 50.00 ATOM 159 O ARG k 182 235.835 99.921 149.191 1.00 50.00 ATOM 160 CB ARG k 182 233.549 98.021 150.244 1.00 50.00 ATOM 161 CG ARG k 182 232.181 97.416 150.521 1.00 50.00 ATOM 162 CD ARG k 182 232.313 96.047 151.167 1.00 50.00 ATOM 163 NE ARG k 182 231.011 95.419 151.398 1.00 50.00 ATOM 164 CZ ARG k 182 230.827 94.214 151.936 1.00 50.00 ATOM 165 NH1 ARG k 182 231.859 93.467 152.317 1.00 50.00 ATOM 166 NH2 ARG k 182 229.595 93.748 152.096 1.00 50.00 ATOM 167 N TYR k 183 234.813 100.991 150.912 1.00 50.00 ATOM 168 CA TYR k 183 235.961 101.802 151.320 1.00 50.00 ATOM 169 C TYR k 183 237.039 100.970 152.009 1.00 50.00 ATOM 170 O TYR k 183 236.732 100.041 152.764 1.00 50.00 ATOM 171 CB TYR k 183 235.504 102.930 152.244 1.00 50.00 ATOM 172 N LYS k 184 238.297 101.321 151.744 1.00 50.00 ATOM 173 CA LYS k 184 239.456 100.607 152.287 1.00 50.00 ATOM 174 C LYS k 184 240.075 101.350 153.470 1.00 50.00 ATOM 175 O LYS k 184 240.285 102.567 153.410 1.00 50.00 ATOM 176 CB LYS k 184 240.498 100.354 151.190 1.00 50.00 ATOM 177 CG LYS k 184 240.066 99.327 150.151 1.00 50.00 ATOM 178 CD LYS k 184 240.966 99.348 148.928 1.00 50.00 ATOM 179 CE LYS k 184 240.429 98.433 147.839 1.00 50.00 ATOM 180 NZ LYS k 184 241.254 98.493 146.601 1.00 50.00 ATOM 181 N LEU k 185 240.361 100.602 154.536 1.00 50.00 ATOM 182 CA LEU k 185 240.851 101.157 155.802 1.00 50.00 ATOM 183 C LEU k 185 242.367 101.014 155.961 1.00 50.00 ATOM 184 O LEU k 185 242.937 99.959 155.663 1.00 50.00 ATOM 185 CB LEU k 185 240.121 100.503 156.988 1.00 50.00 ATOM 186 CG LEU k 185 240.291 101.035 158.420 1.00 50.00 ATOM 187 CD1 LEU k 185 239.579 102.365 158.631 1.00 50.00 ATOM 188 CD2 LEU k 185 239.794 100.007 159.426 1.00 50.00 ATOM 189 N VAL k 186 242.999 102.090 156.432 1.00 50.00 ATOM 190 CA VAL k 186 244.441 102.122 156.712 1.00 50.00 ATOM 191 C VAL k 186 244.695 102.511 158.178 1.00 50.00 ATOM 192 O VAL k 186 245.408 101.799 158.895 1.00 50.00 ATOM 193 CB VAL k 186 245.217 103.063 155.739 1.00 50.00 ATOM 194 CG1 VAL k 186 246.712 103.071 156.045 1.00 50.00 ATOM 195 CG2 VAL k 186 244.998 102.662 154.285 1.00 50.00 ATOM 196 N ARG k 187 244.098 103.625 158.614 1.00 50.00 ATOM 197 CA ARG k 187 244.372 104.207 159.935 1.00 50.00 ATOM 198 C ARG k 187 243.125 104.556 160.751 1.00 50.00 ATOM 199 O ARG k 187 242.127 105.044 160.211 1.00 50.00 ATOM 200 CB ARG k 187 245.255 105.454 159.796 1.00 50.00 ATOM 201 CG ARG k 187 246.734 105.165 159.575 1.00 50.00 ATOM 202 CD ARG k 187 247.526 106.439 159.318 1.00 50.00 ATOM 203 NE ARG k 187 247.379 106.922 157.943 1.00 50.00 ATOM 204 CZ ARG k 187 248.203 106.631 156.936 1.00 50.00 ATOM 205 NH1 ARG k 187 249.263 105.849 157.121 1.00 50.00 ATOM 206 NH2 ARG k 187 247.966 107.128 155.729 1.00 50.00 TER