HEADER VIRUS 04-NOV-09 3KK5 TITLE Crystal structure of PBCV-1 VP54 fitted into a cryo-EM reconstruction TITLE 2 of the virophage Sputnik COMPND MOL_ID: 1; COMPND 2 MOLECULE: Major capsid protein; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L, M; EXPDTA ELECTRON MICROSCOPY DBREF 3KK5 A 1 437 UNP P30328 MCP_PBCV1 1 437 SEQRES 1 A 197 THR PHE PHE LYS THR VAL TYR ARG ARG TYR THR ASN PHE SEQRES 2 A 197 ALA ILE GLU SER ILE GLN GLN THR ILE ASN GLY SER VAL SEQRES 3 A 197 GLY PHE GLY ASN LYS VAL SER THR GLN ILE SER ARG ASN SEQRES 4 A 197 GLY ASP LEU ILE THR ASP ILE VAL VAL GLU PHE VAL LEU SEQRES 5 A 197 THR LYS GLY GLY ASN GLY GLY THR THR TYR TYR PRO ALA SEQRES 6 A 197 GLU GLU LEU LEU GLN ASP VAL GLU LEU GLU ILE GLY GLY SEQRES 7 A 197 GLN ARG ILE ASP LYS HIS TYR ASN ASP TRP PHE ARG THR SEQRES 8 A 197 TYR ASP ALA LEU PHE ARG MET ASN ASP ASP ARG TYR ASN SEQRES 9 A 197 TYR ARG ARG MET THR ASP TRP VAL ASN ASN GLU LEU VAL SEQRES 10 A 197 GLY ALA GLN LYS ARG PHE TYR VAL PRO LEU ILE PHE PHE SEQRES 11 A 197 PHE ASN GLN THR PRO GLY LEU ALA LEU PRO LEU ILE ALA SEQRES 12 A 197 LEU GLN TYR HIS GLU VAL LYS LEU TYR PHE THR LEU ALA SEQRES 13 A 197 SER GLN VAL GLN GLY VAL ASN TYR ASN GLY SER SER ALA SEQRES 14 A 197 ILE ALA GLY ALA ALA GLN PRO THR MET SER VAL TRP VAL SEQRES 15 A 197 ASP TYR ILE PHE LEU ASP THR GLN GLU ARG THR ARG PHE SEQRES 16 A 197 ALA GLN ATOM 1 CA THR A 25 -10.168-115.685 274.811 1.00 60.37 ATOM 2 CA PHE A 26 -9.233-117.375 278.093 1.00 62.85 ATOM 3 CA PHE A 27 -8.999-120.821 276.547 1.00 72.57 ATOM 4 CA LYS A 28 -6.112-120.616 274.094 1.00 80.51 ATOM 5 CA THR A 29 -3.104-118.955 275.665 1.00101.58 ATOM 6 CA VAL A 30 -0.157-118.366 273.332 1.00 82.65 ATOM 7 CA TYR A 31 2.942-118.399 275.550 1.00 81.27 ATOM 8 CA ARG A 32 5.932-116.335 274.504 1.00 76.58 ATOM 9 CA ARG A 33 9.303-117.542 273.272 1.00 62.14 ATOM 10 CA TYR A 34 12.338-116.288 275.161 1.00 68.39 ATOM 11 CA THR A 35 16.103-115.983 274.886 1.00 76.01 ATOM 12 CA ASN A 36 18.027-119.199 275.600 1.00 79.58 ATOM 13 CA PHE A 37 19.984-119.056 278.851 1.00 63.58 ATOM 14 CA ALA A 38 21.392-121.007 281.792 1.00 67.96 ATOM 15 CA ILE A 39 21.887-120.199 285.460 1.00 87.77 ATOM 16 CA GLU A 40 24.541-121.199 287.955 1.00 83.18 ATOM 17 CA SER A 41 25.338-120.166 291.520 1.00 65.80 ATOM 18 CA ILE A 42 29.086-119.789 291.955 1.00 24.85 ATOM 19 CA GLN A 43 30.895-119.140 295.229 1.00 28.50 ATOM 20 CA GLN A 44 32.780-115.889 295.682 1.00 28.30 ATOM 21 CA THR A 45 36.230-115.316 297.138 1.00 47.42 ATOM 22 CA ILE A 46 35.822-113.480 300.415 1.00 35.66 ATOM 23 CA ASN A 47 38.619-110.967 301.050 1.00 38.26 ATOM 24 CA GLY A 48 39.812-110.278 304.584 1.00 36.66 ATOM 25 CA SER A 49 39.399-112.100 307.872 1.00 36.66 ATOM 26 CA VAL A 50 35.837-113.149 308.718 1.00 47.95 ATOM 27 CA GLY A 51 34.818-112.386 312.287 1.00 65.43 ATOM 28 CA PHE A 52 32.630-110.238 314.531 1.00 95.81 ATOM 29 CA GLY A 53 33.471-106.583 313.971 1.00 69.79 ATOM 30 CA ASN A 54 35.497-107.180 310.842 1.00 50.53 ATOM 31 CA LYS A 55 35.107-105.544 307.444 1.00 30.20 ATOM 32 CA VAL A 56 35.335-107.916 304.505 1.00 26.94 ATOM 33 CA SER A 57 34.896-107.493 300.752 1.00 37.83 ATOM 34 CA THR A 58 34.521-109.366 297.476 1.00 59.03 ATOM 35 CA GLN A 59 35.135-108.568 293.823 1.00 75.27 ATOM 36 CA ILE A 60 32.563-110.488 291.789 1.00 95.08 ATOM 37 CA SER A 61 34.389-112.882 289.476 1.00 81.54 ATOM 38 CA ARG A 62 33.573-112.821 285.772 1.00 68.46 ATOM 39 CA ASN A 63 32.259-116.355 285.370 1.00 60.66 ATOM 40 CA GLY A 64 28.900-115.583 283.852 1.00 51.47 ATOM 41 CA ASP A 65 27.487-112.944 281.553 1.00 60.14 ATOM 42 CA LEU A 66 24.926-111.482 283.963 1.00 65.02 ATOM 43 CA ILE A 67 24.414-111.655 287.713 1.00 65.66 ATOM 44 CA THR A 68 21.173-111.680 289.650 1.00 70.60 ATOM 45 CA ASP A 69 20.776-113.246 293.097 1.00 83.80 ATOM 46 CA ILE A 70 23.496-113.046 295.753 1.00 89.02 ATOM 47 CA VAL A 71 23.248-115.024 298.994 1.00 73.15 ATOM 48 CA VAL A 72 25.484-114.677 302.016 1.00 49.95 ATOM 49 CA GLU A 73 25.843-117.909 303.997 1.00 46.63 ATOM 50 CA PHE A 74 26.618-117.914 307.702 1.00 51.49 ATOM 51 CA VAL A 75 27.099-120.728 310.195 1.00 65.38 ATOM 52 CA LEU A 76 26.473-119.751 313.806 1.00 70.90 ATOM 53 CA THR A 77 25.981-121.531 317.137 1.00 61.19 ATOM 54 CA LYS A 78 23.367-120.544 319.755 1.00 71.36 ATOM 55 CA GLY A 79 24.612-119.333 323.128 1.00 78.70 ATOM 56 CA GLY A 80 21.212-119.505 324.788 1.00 81.26 ATOM 57 CA ASN A 81 17.994-121.507 324.806 1.00 68.39 ATOM 58 CA GLY A 82 14.573-120.813 323.290 1.00 61.93 ATOM 59 CA GLY A 83 13.477-117.323 322.314 1.00 51.55 ATOM 60 CA THR A 84 16.971-115.985 322.909 1.00 55.33 ATOM 61 CA THR A 85 17.642-115.118 319.281 1.00 53.50 ATOM 62 CA TYR A 86 16.097-112.640 316.823 1.00 57.27 ATOM 63 CA TYR A 87 17.220-112.630 313.190 1.00 61.09 ATOM 64 CA PRO A 88 20.930-113.174 314.085 1.00 65.62 ATOM 65 CA ALA A 89 22.073-113.737 310.489 1.00 73.77 ATOM 66 CA GLU A 90 20.277-110.578 309.438 1.00 78.01 ATOM 67 CA GLU A 91 21.877-108.538 312.234 1.00 67.49 ATOM 68 CA LEU A 92 25.351-109.979 311.534 1.00 84.53 ATOM 69 CA LEU A 93 25.223-108.255 308.134 1.00 88.24 ATOM 70 CA GLN A 94 25.453-104.750 309.599 1.00 69.75 ATOM 71 CA ASP A 95 25.749-103.258 306.089 1.00 77.26 ATOM 72 CA VAL A 96 26.490-104.127 302.462 1.00 83.94 ATOM 73 CA GLU A 97 27.828-101.721 299.841 1.00 69.25 ATOM 74 CA LEU A 98 27.628-102.299 296.086 1.00 81.35 ATOM 75 CA GLU A 99 30.412-100.613 294.137 1.00 69.43 ATOM 76 CA ILE A 100 30.963-100.560 290.360 1.00 74.20 ATOM 77 CA GLY A 101 34.153 -99.160 288.831 1.00 58.97 ATOM 78 CA GLY A 102 35.063 -97.663 292.189 1.00 63.10 ATOM 79 CA GLN A 103 31.732 -95.820 292.291 1.00 65.50 ATOM 80 CA ARG A 104 29.154 -96.675 294.925 1.00 68.26 ATOM 81 CA ILE A 105 25.754 -97.686 293.513 1.00 72.31 ATOM 82 CA ASP A 106 23.889 -98.530 296.719 1.00 64.09 ATOM 83 CA LYS A 107 24.385 -99.523 300.360 1.00 78.46 ATOM 84 CA HIS A 108 22.089-101.389 302.756 1.00 91.52 ATOM 85 CA TYR A 109 22.007-101.708 306.527 1.00 77.98 ATOM 86 CA ASN A 110 20.893-103.976 309.340 1.00 63.31 ATOM 87 CA ASP A 111 17.827-101.980 310.203 1.00 57.71 ATOM 88 CA TRP A 112 16.886-101.667 306.517 1.00 76.85 ATOM 89 CA PHE A 113 16.654-105.428 306.045 1.00 81.11 ATOM 90 CA ARG A 114 14.541-105.513 309.222 1.00 66.38 ATOM 91 CA THR A 115 12.331-102.647 308.002 1.00 53.51 ATOM 92 CA TYR A 116 12.103-104.171 304.538 1.00 56.91 ATOM 93 CA ASP A 117 10.978-107.495 305.968 1.00 60.50 ATOM 94 CA ALA A 118 8.389-105.815 308.206 1.00 54.77 ATOM 95 CA LEU A 119 6.986-103.844 305.290 1.00 32.60 ATOM 96 CA PHE A 120 7.531-105.766 302.030 1.00 49.16 ATOM 97 CA ARG A 121 7.801-109.453 302.867 1.00 50.48 ATOM 98 CA MET A 122 4.692-111.401 303.880 1.00 62.02 ATOM 99 CA ASN A 123 2.997-114.685 304.611 1.00 82.45 ATOM 100 CA ASP A 124 4.978-117.940 304.117 1.00 73.55 ATOM 101 CA ASP A 125 7.704-116.082 302.234 1.00 51.88 ATOM 102 CA ARG A 126 8.326-113.964 305.319 1.00 58.22 ATOM 103 CA TYR A 127 8.348-117.068 307.498 1.00 75.09 ATOM 104 CA ASN A 128 10.763-118.813 305.135 1.00 61.81 ATOM 105 CA TYR A 129 12.980-115.728 305.397 1.00 60.81 ATOM 106 CA ARG A 130 13.117-116.106 309.177 1.00 70.21 ATOM 107 CA ARG A 131 14.035-119.783 308.804 1.00 70.19 ATOM 108 CA MET A 132 16.936-118.591 306.642 1.00 52.77 ATOM 109 CA THR A 133 17.798-115.852 309.123 1.00 62.65 ATOM 110 CA ASP A 134 17.572-117.609 312.505 1.00 66.19 ATOM 111 CA TRP A 135 16.572-120.445 314.784 1.00 67.90 ATOM 112 CA VAL A 136 12.830-121.051 314.609 1.00 74.05 ATOM 113 CA ASN A 137 12.468-124.464 316.292 1.00 79.63 ATOM 114 CA ASN A 138 13.209-123.673 319.951 1.00 72.79 ATOM 115 CA GLU A 139 16.848-124.691 319.708 1.00 68.76 ATOM 116 CA LEU A 140 18.980-124.770 322.853 1.00 66.30 ATOM 117 CA VAL A 141 22.542-123.746 323.662 1.00 81.14 ATOM 118 CA GLY A 142 25.115-125.213 321.296 1.00 54.62 ATOM 119 CA ALA A 143 22.756-125.613 318.331 1.00 56.87 ATOM 120 CA GLN A 144 24.617-124.861 315.061 1.00 70.28 ATOM 121 CA LYS A 145 22.715-123.683 311.977 1.00 72.26 ATOM 122 CA ARG A 146 23.298-122.678 308.347 1.00 74.98 ATOM 123 CA PHE A 147 21.964-119.198 307.570 1.00 63.45 ATOM 124 CA TYR A 148 21.234-117.639 304.187 1.00 48.46 ATOM 125 CA VAL A 149 20.827-113.885 303.938 1.00 56.52 ATOM 126 CA PRO A 150 19.545-112.805 300.485 1.00 70.58 ATOM 127 CA LEU A 151 20.650-109.347 299.308 1.00 66.11 ATOM 128 CA ILE A 152 18.066-106.903 297.956 1.00 51.29 ATOM 129 CA PHE A 153 19.895-104.655 295.463 1.00 46.19 ATOM 130 CA PHE A 154 18.181-103.698 292.192 1.00 70.11 ATOM 131 CA PHE A 155 19.663-106.605 290.242 1.00 63.77 ATOM 132 CA ASN A 156 18.843-109.039 293.090 1.00 56.32 ATOM 133 CA GLN A 157 15.118-108.244 292.947 1.00 72.88 ATOM 134 CA THR A 158 14.407-108.728 289.228 1.00 95.65 ATOM 135 CA PRO A 159 16.042-110.765 286.490 1.00 85.38 ATOM 136 CA GLY A 160 14.976-107.870 284.251 1.00 90.50 ATOM 137 CA LEU A 161 17.582-105.673 285.920 1.00 87.96 ATOM 138 CA ALA A 162 20.306-108.330 285.800 1.00 68.37 ATOM 139 CA LEU A 163 23.688-106.567 286.029 1.00 78.10 ATOM 140 CA PRO A 164 25.543-107.253 282.714 1.00 82.45 ATOM 141 CA LEU A 165 29.116-108.222 283.605 1.00 69.41 ATOM 142 CA ILE A 166 30.008-108.682 279.946 1.00 67.64 ATOM 143 CA ALA A 167 29.119-105.029 279.442 1.00 59.88 ATOM 144 CA LEU A 168 31.337-103.919 282.337 1.00 69.02 ATOM 145 CA GLN A 169 34.603-105.287 280.973 1.00 84.30 ATOM 146 CA TYR A 170 36.504-102.374 282.553 1.00 81.56 ATOM 147 CA HIS A 171 34.481-101.799 285.716 1.00 70.86 ATOM 148 CA GLU A 172 35.022-104.020 288.750 1.00 66.57 ATOM 149 CA VAL A 173 31.925-104.966 290.725 1.00 84.86 ATOM 150 CA LYS A 174 32.593-105.193 294.457 1.00 80.28 ATOM 151 CA LEU A 175 30.708-105.752 297.696 1.00 84.94 ATOM 152 CA TYR A 176 31.763-104.437 301.100 1.00 45.45 ATOM 153 CA PHE A 177 30.388-106.119 304.227 1.00 64.89 ATOM 154 CA THR A 178 30.716-105.005 307.834 1.00 58.34 ATOM 155 CA LEU A 179 29.877-107.712 310.350 1.00 87.19 ATOM 156 CA ALA A 180 28.151-106.779 313.604 1.00 71.31 ATOM 157 CA SER A 181 30.387-107.069 316.651 1.00 72.61 ATOM 158 CA GLN A 182 27.702-108.198 319.114 1.00 65.47 ATOM 159 CA VAL A 183 24.810-110.431 318.115 1.00 52.03 ATOM 160 CA GLN A 184 22.298-111.341 320.832 1.00 28.39 ATOM 161 CA GLY A 185 21.934-115.034 321.606 1.00 49.59 ATOM 162 CA VAL A 186 25.093-115.866 319.681 1.00 69.88 ATOM 163 CA ASN A 187 27.935-113.519 320.594 1.00 67.60 ATOM 164 CA TYR A 188 26.563-111.905 323.754 1.00 52.16 ATOM 165 CA ASN A 189 23.566-112.131 326.072 1.00 44.11 ATOM 166 CA GLY A 190 22.663-108.523 326.678 1.00 33.17 ATOM 167 CA SER A 191 25.858-106.625 327.457 1.00 35.97 ATOM 168 CA SER A 192 27.573-109.798 328.736 1.00 54.86 ATOM 169 CA ALA A 193 29.786-111.702 326.325 1.00 59.14 ATOM 170 CA ILE A 194 29.108-115.445 326.023 1.00 55.96 ATOM 171 CA ALA A 195 32.265-117.430 326.741 1.00 42.77 ATOM 172 CA GLY A 196 33.408-119.954 324.150 1.00 37.18 ATOM 173 CA ALA A 197 31.249-118.158 321.576 1.00 38.27 ATOM 174 CA ALA A 198 32.437-119.357 318.180 1.00 32.82 ATOM 175 CA GLN A 199 33.304-116.886 315.435 1.00 39.34 ATOM 176 CA PRO A 200 31.077-116.745 312.349 1.00 42.82 ATOM 177 CA THR A 201 31.800-118.669 309.137 1.00 38.02 ATOM 178 CA MET A 202 30.909-116.750 305.992 1.00 43.04 ATOM 179 CA SER A 203 30.368-117.642 302.338 1.00 48.88 ATOM 180 CA VAL A 204 29.234-115.476 299.398 1.00 45.24 ATOM 181 CA TRP A 205 27.330-116.962 296.455 1.00 52.10 ATOM 182 CA VAL A 206 26.363-115.262 293.191 1.00 74.52 ATOM 183 CA ASP A 207 23.912-116.452 290.524 1.00 80.20 ATOM 184 CA TYR A 208 25.171-116.078 286.946 1.00 60.39 ATOM 185 CA ILE A 209 23.186-116.093 283.740 1.00 69.55 ATOM 186 CA PHE A 210 24.934-117.549 280.704 1.00 63.71 ATOM 187 CA LEU A 211 23.480-116.089 277.533 1.00 67.09 ATOM 188 CA ASP A 212 23.364-117.333 273.976 1.00 64.45 ATOM 189 CA THR A 213 25.645-115.935 271.240 1.00 59.04 ATOM 190 CA GLN A 214 22.928-113.744 269.761 1.00 65.45 ATOM 191 CA GLU A 215 22.112-111.811 272.928 1.00 69.07 ATOM 192 CA ARG A 216 25.714-111.925 274.191 1.00 64.78 ATOM 193 CA THR A 217 26.858-109.885 271.209 1.00 66.58 ATOM 194 CA ARG A 218 24.162-107.318 271.852 1.00 65.48 ATOM 195 CA PHE A 219 24.915-107.019 275.570 1.00 71.78 ATOM 196 CA ALA A 220 28.540-106.453 274.634 1.00 76.56 ATOM 197 CA GLN A 221 27.927-104.167 271.680 1.00 77.84 TER