HEADER VIRUS 04-NOV-09 3KK5 TITLE Crystal structure of PBCV-1 VP54 fitted into a cryo-EM reconstruction TITLE 2 of the virophage Sputnik COMPND MOL_ID: 1; COMPND 2 MOLECULE: Major capsid protein; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L, M; EXPDTA ELECTRON MICROSCOPY DBREF 3KK5 E 1 437 UNP P30328 MCP_PBCV1 1 437 SEQRES 1 E 197 THR PHE PHE LYS THR VAL TYR ARG ARG TYR THR ASN PHE SEQRES 2 E 197 ALA ILE GLU SER ILE GLN GLN THR ILE ASN GLY SER VAL SEQRES 3 E 197 GLY PHE GLY ASN LYS VAL SER THR GLN ILE SER ARG ASN SEQRES 4 E 197 GLY ASP LEU ILE THR ASP ILE VAL VAL GLU PHE VAL LEU SEQRES 5 E 197 THR LYS GLY GLY ASN GLY GLY THR THR TYR TYR PRO ALA SEQRES 6 E 197 GLU GLU LEU LEU GLN ASP VAL GLU LEU GLU ILE GLY GLY SEQRES 7 E 197 GLN ARG ILE ASP LYS HIS TYR ASN ASP TRP PHE ARG THR SEQRES 8 E 197 TYR ASP ALA LEU PHE ARG MET ASN ASP ASP ARG TYR ASN SEQRES 9 E 197 TYR ARG ARG MET THR ASP TRP VAL ASN ASN GLU LEU VAL SEQRES 10 E 197 GLY ALA GLN LYS ARG PHE TYR VAL PRO LEU ILE PHE PHE SEQRES 11 E 197 PHE ASN GLN THR PRO GLY LEU ALA LEU PRO LEU ILE ALA SEQRES 12 E 197 LEU GLN TYR HIS GLU VAL LYS LEU TYR PHE THR LEU ALA SEQRES 13 E 197 SER GLN VAL GLN GLY VAL ASN TYR ASN GLY SER SER ALA SEQRES 14 E 197 ILE ALA GLY ALA ALA GLN PRO THR MET SER VAL TRP VAL SEQRES 15 E 197 ASP TYR ILE PHE LEU ASP THR GLN GLU ARG THR ARG PHE SEQRES 16 E 197 ALA GLN ATOM 1 CA THR E 25 51.041 3.490 289.116 1.00 61.81 ATOM 2 CA PHE E 26 51.183 2.657 292.830 1.00 70.04 ATOM 3 CA PHE E 27 47.997 0.619 292.756 1.00 77.44 ATOM 4 CA LYS E 28 48.768 -2.352 290.524 1.00 80.89 ATOM 5 CA THR E 29 52.085 -3.915 291.435 1.00 99.83 ATOM 6 CA VAL E 30 53.235 -6.746 289.169 1.00 83.92 ATOM 7 CA TYR E 31 55.428 -8.982 291.335 1.00 81.35 ATOM 8 CA ARG E 32 58.217 -10.928 289.682 1.00 90.36 ATOM 9 CA ARG E 33 58.470 -14.669 289.143 1.00 72.50 ATOM 10 CA TYR E 34 61.572 -16.363 290.503 1.00 67.94 ATOM 11 CA THR E 35 63.555 -19.581 290.272 1.00 70.43 ATOM 12 CA ASN E 36 62.105 -22.502 292.252 1.00 84.61 ATOM 13 CA PHE E 37 64.224 -23.440 295.260 1.00 74.39 ATOM 14 CA ALA E 38 64.274 -24.875 298.776 1.00 73.74 ATOM 15 CA ILE E 39 66.360 -24.156 301.858 1.00 81.95 ATOM 16 CA GLU E 40 67.641 -26.364 304.643 1.00 80.62 ATOM 17 CA SER E 41 70.020 -25.834 307.551 1.00 75.88 ATOM 18 CA ILE E 42 72.285 -28.850 307.943 1.00 55.43 ATOM 19 CA GLN E 43 74.749 -29.433 310.770 1.00 46.54 ATOM 20 CA GLN E 44 78.452 -29.570 309.993 1.00 61.69 ATOM 21 CA THR E 45 81.061 -32.018 311.238 1.00 66.17 ATOM 22 CA ILE E 46 83.417 -30.146 313.527 1.00 58.98 ATOM 23 CA ASN E 47 87.021 -31.362 313.237 1.00 63.92 ATOM 24 CA GLY E 48 89.301 -31.333 316.266 1.00 67.47 ATOM 25 CA SER E 49 88.687 -31.046 319.984 1.00 55.98 ATOM 26 CA VAL E 50 86.382 -28.203 321.040 1.00 42.43 ATOM 27 CA GLY E 51 87.665 -26.201 323.990 1.00 48.42 ATOM 28 CA PHE E 52 89.075 -22.867 325.140 1.00 76.30 ATOM 29 CA GLY E 53 92.270 -22.136 323.234 1.00 57.69 ATOM 30 CA ASN E 54 91.754 -24.850 320.662 1.00 38.48 ATOM 31 CA LYS E 55 91.795 -24.541 316.882 1.00 41.09 ATOM 32 CA VAL E 56 89.026 -26.415 315.109 1.00 42.07 ATOM 33 CA SER E 57 87.941 -26.665 311.472 1.00 49.68 ATOM 34 CA THR E 58 85.177 -27.867 309.172 1.00 79.46 ATOM 35 CA GLN E 59 84.938 -28.856 305.521 1.00 79.39 ATOM 36 CA ILE E 60 81.473 -27.886 304.300 1.00 91.68 ATOM 37 CA SER E 61 79.664 -31.027 303.170 1.00 67.42 ATOM 38 CA ARG E 62 78.119 -31.097 299.706 1.00 59.06 ATOM 39 CA ASN E 63 74.480 -31.571 300.664 1.00 51.54 ATOM 40 CA GLY E 64 72.989 -28.630 298.842 1.00 55.02 ATOM 41 CA ASP E 65 73.703 -26.752 295.646 1.00 75.62 ATOM 42 CA LEU E 66 74.431 -23.353 297.201 1.00 72.58 ATOM 43 CA ILE E 67 75.255 -22.162 300.701 1.00 60.00 ATOM 44 CA THR E 68 74.292 -18.917 302.375 1.00 67.21 ATOM 45 CA ASP E 69 73.944 -18.498 306.143 1.00 83.40 ATOM 46 CA ILE E 70 76.285 -20.206 308.610 1.00 82.20 ATOM 47 CA VAL E 71 75.607 -20.141 312.354 1.00 82.65 ATOM 48 CA VAL E 72 77.952 -21.285 315.083 1.00 59.60 ATOM 49 CA GLU E 73 76.140 -22.567 318.177 1.00 45.62 ATOM 50 CA PHE E 74 77.713 -22.437 321.618 1.00 37.95 ATOM 51 CA VAL E 75 76.466 -23.535 325.025 1.00 50.80 ATOM 52 CA LEU E 76 78.126 -21.775 327.946 1.00 52.30 ATOM 53 CA THR E 77 77.522 -21.391 331.688 1.00 50.25 ATOM 54 CA LYS E 78 77.905 -18.105 333.617 1.00 73.37 ATOM 55 CA GLY E 79 80.584 -17.930 336.295 1.00 78.91 ATOM 56 CA GLY E 80 79.336 -14.672 337.764 1.00 75.61 ATOM 57 CA ASN E 81 76.154 -12.724 338.440 1.00 70.51 ATOM 58 CA GLY E 82 74.568 -9.765 336.652 1.00 55.31 ATOM 59 CA GLY E 83 76.556 -7.503 334.355 1.00 49.03 ATOM 60 CA THR E 84 79.531 -9.847 334.509 1.00 42.75 ATOM 61 CA THR E 85 79.384 -10.850 330.857 1.00 49.97 ATOM 62 CA TYR E 86 79.853 -8.960 327.575 1.00 56.03 ATOM 63 CA TYR E 87 79.227 -10.732 324.268 1.00 64.89 ATOM 64 CA PRO E 88 80.874 -14.014 325.440 1.00 66.57 ATOM 65 CA ALA E 89 79.807 -16.045 322.391 1.00 72.69 ATOM 66 CA GLU E 90 81.162 -13.332 320.128 1.00 79.63 ATOM 67 CA GLU E 91 84.499 -13.234 321.969 1.00 72.90 ATOM 68 CA LEU E 92 84.788 -17.047 322.013 1.00 98.63 ATOM 69 CA LEU E 93 85.024 -16.930 318.207 1.00 90.25 ATOM 70 CA GLN E 94 88.458 -15.289 318.199 1.00 67.65 ATOM 71 CA ASP E 95 88.677 -15.667 314.401 1.00 75.79 ATOM 72 CA VAL E 96 87.155 -17.485 311.427 1.00 81.62 ATOM 73 CA GLU E 97 88.910 -18.182 308.129 1.00 67.79 ATOM 74 CA LEU E 98 87.127 -19.078 304.889 1.00 91.60 ATOM 75 CA GLU E 99 89.216 -21.206 302.542 1.00 75.61 ATOM 76 CA ILE E 100 88.304 -22.490 299.064 1.00 86.83 ATOM 77 CA GLY E 101 90.491 -25.003 297.230 1.00 71.95 ATOM 78 CA GLY E 102 93.236 -24.414 299.771 1.00 70.90 ATOM 79 CA GLN E 103 93.151 -20.680 299.026 1.00 76.25 ATOM 80 CA ARG E 104 92.060 -18.224 301.687 1.00 73.16 ATOM 81 CA ILE E 105 89.134 -16.000 300.657 1.00 72.60 ATOM 82 CA ASP E 106 88.581 -14.036 303.867 1.00 69.04 ATOM 83 CA LYS E 107 89.195 -14.107 307.624 1.00 76.86 ATOM 84 CA HIS E 108 87.343 -12.385 310.470 1.00 94.58 ATOM 85 CA TYR E 109 88.265 -11.627 314.063 1.00 94.08 ATOM 86 CA ASN E 110 86.794 -11.025 317.494 1.00 72.52 ATOM 87 CA ASP E 111 87.208 -7.291 317.399 1.00 72.21 ATOM 88 CA TRP E 112 85.814 -7.138 313.848 1.00 97.42 ATOM 89 CA PHE E 113 82.490 -8.671 314.868 1.00 86.87 ATOM 90 CA ARG E 114 82.429 -6.167 317.747 1.00 70.38 ATOM 91 CA THR E 115 83.289 -3.257 315.428 1.00 66.44 ATOM 92 CA TYR E 116 80.820 -4.478 312.824 1.00 65.21 ATOM 93 CA ASP E 117 78.035 -4.625 315.391 1.00 71.41 ATOM 94 CA ALA E 118 78.871 -1.145 316.703 1.00 57.88 ATOM 95 CA LEU E 119 78.849 0.301 313.200 1.00 28.99 ATOM 96 CA PHE E 120 76.495 -1.722 310.968 1.00 41.81 ATOM 97 CA ARG E 121 73.902 -3.375 313.183 1.00 59.98 ATOM 98 CA MET E 122 71.139 -1.285 314.756 1.00 72.03 ATOM 99 CA ASN E 123 67.888 -1.068 316.645 1.00 84.69 ATOM 100 CA ASP E 124 66.041 -4.323 317.528 1.00 81.28 ATOM 101 CA ASP E 125 68.263 -6.308 315.176 1.00 57.67 ATOM 102 CA ARG E 126 71.284 -5.257 317.214 1.00 61.87 ATOM 103 CA TYR E 127 69.478 -6.149 320.428 1.00 75.73 ATOM 104 CA ASN E 128 68.466 -9.534 319.019 1.00 55.85 ATOM 105 CA TYR E 129 72.132 -10.075 318.142 1.00 45.93 ATOM 106 CA ARG E 130 73.114 -9.532 321.774 1.00 60.43 ATOM 107 CA ARG E 131 70.452 -12.012 322.894 1.00 56.43 ATOM 108 CA MET E 132 72.127 -14.502 320.549 1.00 53.20 ATOM 109 CA THR E 133 75.573 -13.525 321.798 1.00 59.47 ATOM 110 CA ASP E 134 75.132 -13.350 325.586 1.00 59.72 ATOM 111 CA TRP E 135 73.081 -13.211 328.749 1.00 64.53 ATOM 112 CA VAL E 136 70.718 -10.242 328.686 1.00 68.50 ATOM 113 CA ASN E 137 68.314 -11.040 331.549 1.00 67.93 ATOM 114 CA ASN E 138 70.502 -10.543 334.638 1.00 58.55 ATOM 115 CA GLU E 139 71.359 -14.220 334.945 1.00 67.43 ATOM 116 CA LEU E 140 73.346 -15.429 337.948 1.00 78.79 ATOM 117 CA VAL E 141 76.169 -17.921 338.427 1.00 72.77 ATOM 118 CA GLY E 142 75.457 -21.323 336.915 1.00 52.32 ATOM 119 CA ALA E 143 73.029 -20.083 334.255 1.00 66.58 ATOM 120 CA GLN E 144 73.482 -22.097 331.019 1.00 70.71 ATOM 121 CA LYS E 145 72.519 -20.599 327.653 1.00 75.34 ATOM 122 CA ARG E 146 72.441 -21.464 323.940 1.00 66.12 ATOM 123 CA PHE E 147 74.371 -18.956 321.823 1.00 57.42 ATOM 124 CA TYR E 148 74.188 -18.381 318.076 1.00 66.93 ATOM 125 CA VAL E 149 76.960 -16.450 316.372 1.00 69.98 ATOM 126 CA PRO E 150 76.098 -15.614 312.725 1.00 77.90 ATOM 127 CA LEU E 151 79.062 -15.337 310.339 1.00 67.97 ATOM 128 CA ILE E 152 79.357 -12.313 308.047 1.00 63.02 ATOM 129 CA PHE E 153 81.262 -13.480 304.946 1.00 66.76 ATOM 130 CA PHE E 154 80.150 -12.281 301.500 1.00 81.88 ATOM 131 CA PHE E 155 77.874 -15.264 300.891 1.00 73.82 ATOM 132 CA ASN E 156 76.423 -14.983 304.428 1.00 68.56 ATOM 133 CA GLN E 157 75.215 -11.412 303.849 1.00 80.74 ATOM 134 CA THR E 158 73.273 -11.815 300.588 1.00 93.69 ATOM 135 CA PRO E 159 71.526 -14.726 298.920 1.00 75.64 ATOM 136 CA GLY E 160 72.634 -13.027 295.694 1.00 91.64 ATOM 137 CA LEU E 161 76.223 -13.984 296.474 1.00 93.55 ATOM 138 CA ALA E 162 75.345 -17.546 297.497 1.00 74.23 ATOM 139 CA LEU E 163 78.492 -19.685 297.145 1.00 78.43 ATOM 140 CA PRO E 164 77.759 -22.329 294.429 1.00 92.92 ATOM 141 CA LEU E 165 78.992 -25.677 295.760 1.00 83.57 ATOM 142 CA ILE E 166 77.866 -27.457 292.601 1.00 82.78 ATOM 143 CA ALA E 167 80.240 -25.204 290.684 1.00 64.54 ATOM 144 CA LEU E 168 83.156 -26.027 292.999 1.00 58.31 ATOM 145 CA GLN E 169 83.186 -29.774 292.395 1.00 73.10 ATOM 146 CA TYR E 170 86.985 -29.825 292.789 1.00 84.35 ATOM 147 CA HIS E 171 87.496 -27.116 295.399 1.00 72.12 ATOM 148 CA GLU E 172 86.936 -27.889 299.078 1.00 70.78 ATOM 149 CA VAL E 173 85.307 -25.163 301.151 1.00 90.42 ATOM 150 CA LYS E 174 86.654 -25.030 304.696 1.00 77.69 ATOM 151 CA LEU E 175 86.336 -22.918 307.828 1.00 84.30 ATOM 152 CA TYR E 176 89.017 -22.523 310.489 1.00 52.50 ATOM 153 CA PHE E 177 87.998 -21.370 313.970 1.00 52.84 ATOM 154 CA THR E 178 90.230 -20.385 316.871 1.00 34.54 ATOM 155 CA LEU E 179 88.439 -20.276 320.210 1.00 62.92 ATOM 156 CA ALA E 180 89.413 -17.653 322.775 1.00 70.59 ATOM 157 CA SER E 181 91.249 -19.068 325.775 1.00 71.21 ATOM 158 CA GLN E 182 89.829 -16.673 328.383 1.00 65.15 ATOM 159 CA VAL E 183 86.290 -15.333 328.226 1.00 70.78 ATOM 160 CA GLN E 184 85.213 -12.940 330.989 1.00 44.66 ATOM 161 CA GLY E 185 82.285 -14.056 333.123 1.00 66.38 ATOM 162 CA VAL E 186 82.519 -17.598 331.791 1.00 88.80 ATOM 163 CA ASN E 187 86.098 -18.864 331.825 1.00 85.93 ATOM 164 CA TYR E 188 87.768 -16.274 334.054 1.00 65.50 ATOM 165 CA ASN E 189 86.881 -13.246 336.165 1.00 56.27 ATOM 166 CA GLY E 190 89.573 -10.758 335.286 1.00 49.01 ATOM 167 CA SER E 191 92.914 -12.555 335.384 1.00 66.14 ATOM 168 CA SER E 192 91.582 -15.153 337.859 1.00 69.95 ATOM 169 CA ALA E 193 90.327 -18.439 336.461 1.00 65.10 ATOM 170 CA ILE E 194 86.860 -19.539 337.614 1.00 65.74 ATOM 171 CA ALA E 195 87.009 -23.002 339.164 1.00 59.23 ATOM 172 CA GLY E 196 84.673 -25.663 337.803 1.00 60.58 ATOM 173 CA ALA E 197 84.254 -23.559 334.656 1.00 52.17 ATOM 174 CA ALA E 198 82.754 -25.860 332.039 1.00 31.60 ATOM 175 CA GLN E 199 84.293 -26.145 328.582 1.00 38.57 ATOM 176 CA PRO E 200 82.328 -24.812 325.605 1.00 52.15 ATOM 177 CA THR E 201 80.075 -26.981 323.424 1.00 48.74 ATOM 178 CA MET E 202 80.184 -26.056 319.748 1.00 53.09 ATOM 179 CA SER E 203 78.014 -26.769 316.713 1.00 41.90 ATOM 180 CA VAL E 204 78.272 -25.480 313.122 1.00 56.70 ATOM 181 CA TRP E 205 75.190 -25.104 310.921 1.00 62.33 ATOM 182 CA VAL E 206 75.045 -24.235 307.219 1.00 72.21 ATOM 183 CA ASP E 207 72.024 -23.191 305.137 1.00 80.07 ATOM 184 CA TYR E 208 71.781 -24.909 301.745 1.00 60.92 ATOM 185 CA ILE E 209 69.767 -23.884 298.726 1.00 69.55 ATOM 186 CA PHE E 210 68.448 -26.708 296.563 1.00 68.32 ATOM 187 CA LEU E 211 67.902 -25.495 293.022 1.00 74.50 ATOM 188 CA ASP E 212 65.683 -26.712 290.228 1.00 69.61 ATOM 189 CA THR E 213 67.039 -28.694 287.248 1.00 71.51 ATOM 190 CA GLN E 214 67.024 -25.693 284.935 1.00 93.93 ATOM 191 CA GLU E 215 69.222 -23.447 287.069 1.00 90.00 ATOM 192 CA ARG E 216 71.288 -26.370 288.407 1.00 68.65 ATOM 193 CA THR E 217 72.532 -27.136 284.911 1.00 84.74 ATOM 194 CA ARG E 218 73.519 -23.526 284.406 1.00 88.59 ATOM 195 CA PHE E 219 75.331 -23.238 287.739 1.00 69.63 ATOM 196 CA ALA E 220 77.245 -26.367 286.791 1.00 78.35 ATOM 197 CA GLN E 221 77.849 -25.485 283.160 1.00 96.18 TER