HEADER VIRUS 04-NOV-09 3KK5 TITLE Crystal structure of PBCV-1 VP54 fitted into a cryo-EM reconstruction TITLE 2 of the virophage Sputnik COMPND MOL_ID: 1; COMPND 2 MOLECULE: Major capsid protein; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L, M; EXPDTA ELECTRON MICROSCOPY DBREF 3KK5 I 1 437 UNP P30328 MCP_PBCV1 1 437 SEQRES 1 I 197 THR PHE PHE LYS THR VAL TYR ARG ARG TYR THR ASN PHE SEQRES 2 I 197 ALA ILE GLU SER ILE GLN GLN THR ILE ASN GLY SER VAL SEQRES 3 I 197 GLY PHE GLY ASN LYS VAL SER THR GLN ILE SER ARG ASN SEQRES 4 I 197 GLY ASP LEU ILE THR ASP ILE VAL VAL GLU PHE VAL LEU SEQRES 5 I 197 THR LYS GLY GLY ASN GLY GLY THR THR TYR TYR PRO ALA SEQRES 6 I 197 GLU GLU LEU LEU GLN ASP VAL GLU LEU GLU ILE GLY GLY SEQRES 7 I 197 GLN ARG ILE ASP LYS HIS TYR ASN ASP TRP PHE ARG THR SEQRES 8 I 197 TYR ASP ALA LEU PHE ARG MET ASN ASP ASP ARG TYR ASN SEQRES 9 I 197 TYR ARG ARG MET THR ASP TRP VAL ASN ASN GLU LEU VAL SEQRES 10 I 197 GLY ALA GLN LYS ARG PHE TYR VAL PRO LEU ILE PHE PHE SEQRES 11 I 197 PHE ASN GLN THR PRO GLY LEU ALA LEU PRO LEU ILE ALA SEQRES 12 I 197 LEU GLN TYR HIS GLU VAL LYS LEU TYR PHE THR LEU ALA SEQRES 13 I 197 SER GLN VAL GLN GLY VAL ASN TYR ASN GLY SER SER ALA SEQRES 14 I 197 ILE ALA GLY ALA ALA GLN PRO THR MET SER VAL TRP VAL SEQRES 15 I 197 ASP TYR ILE PHE LEU ASP THR GLN GLU ARG THR ARG PHE SEQRES 16 I 197 ALA GLN ATOM 1 CA THR I 25 76.108 -71.700 277.949 1.00 63.25 ATOM 2 CA PHE I 26 76.174 -71.845 281.753 1.00 63.63 ATOM 3 CA PHE I 27 79.305 -69.736 282.034 1.00 78.23 ATOM 4 CA LYS I 28 78.330 -66.325 280.683 1.00 81.84 ATOM 5 CA THR I 29 75.040 -65.173 282.141 1.00103.04 ATOM 6 CA VAL I 30 73.688 -61.904 280.738 1.00 90.03 ATOM 7 CA TYR I 31 71.579 -60.377 283.522 1.00 89.12 ATOM 8 CA ARG I 32 68.653 -58.181 282.570 1.00 89.61 ATOM 9 CA ARG I 33 68.281 -54.442 283.024 1.00 71.00 ATOM 10 CA TYR I 34 65.230 -53.267 284.937 1.00 59.16 ATOM 11 CA THR I 35 63.163 -50.173 285.643 1.00 59.25 ATOM 12 CA ASN I 36 64.661 -47.801 288.226 1.00 61.79 ATOM 13 CA PHE I 37 62.712 -47.743 291.484 1.00 65.24 ATOM 14 CA ALA I 38 62.843 -47.251 295.248 1.00 73.33 ATOM 15 CA ILE I 39 60.967 -48.809 298.149 1.00 92.18 ATOM 16 CA GLU I 40 59.806 -47.434 301.468 1.00 83.50 ATOM 17 CA SER I 41 57.623 -48.778 304.267 1.00 71.81 ATOM 18 CA ILE I 42 55.316 -46.047 305.538 1.00 36.73 ATOM 19 CA GLN I 43 53.018 -46.296 308.549 1.00 37.40 ATOM 20 CA GLN I 44 49.272 -46.105 308.030 1.00 73.98 ATOM 21 CA THR I 45 46.689 -44.157 309.998 1.00 72.08 ATOM 22 CA ILE I 46 44.521 -46.635 311.850 1.00 60.61 ATOM 23 CA ASN I 47 40.881 -45.524 312.073 1.00 59.63 ATOM 24 CA GLY I 48 38.789 -46.408 315.114 1.00 53.88 ATOM 25 CA SER I 49 39.633 -47.611 318.594 1.00 41.50 ATOM 26 CA VAL I 50 42.064 -50.539 318.761 1.00 46.54 ATOM 27 CA GLY I 51 41.010 -53.273 321.165 1.00 64.23 ATOM 28 CA PHE I 52 39.751 -56.842 321.495 1.00 81.33 ATOM 29 CA GLY I 53 36.461 -57.185 319.637 1.00 59.42 ATOM 30 CA ASN I 54 36.757 -53.886 317.823 1.00 36.73 ATOM 31 CA LYS I 55 36.492 -53.222 314.101 1.00 31.12 ATOM 32 CA VAL I 56 39.107 -50.858 312.719 1.00 26.96 ATOM 33 CA SER I 57 39.960 -49.649 309.218 1.00 52.34 ATOM 34 CA THR I 58 42.551 -47.795 307.158 1.00 68.41 ATOM 35 CA GLN I 59 42.542 -45.904 303.875 1.00 65.98 ATOM 36 CA ILE I 60 45.947 -46.397 302.265 1.00 89.31 ATOM 37 CA SER I 61 47.614 -43.006 301.884 1.00 68.60 ATOM 38 CA ARG I 62 48.939 -41.999 298.475 1.00 60.44 ATOM 39 CA ASN I 63 52.620 -41.646 299.326 1.00 57.33 ATOM 40 CA GLY I 64 54.066 -43.967 296.735 1.00 51.16 ATOM 41 CA ASP I 65 53.199 -44.996 293.211 1.00 65.17 ATOM 42 CA LEU I 66 52.648 -48.707 293.876 1.00 71.08 ATOM 43 CA ILE I 67 52.067 -50.777 296.994 1.00 62.44 ATOM 44 CA THR I 68 53.202 -54.304 297.727 1.00 62.06 ATOM 45 CA ASP I 69 53.790 -55.655 301.235 1.00 79.90 ATOM 46 CA ILE I 70 51.567 -54.721 304.178 1.00 80.94 ATOM 47 CA VAL I 71 52.471 -55.713 307.739 1.00 73.22 ATOM 48 CA VAL I 72 50.271 -55.390 310.790 1.00 60.30 ATOM 49 CA GLU I 73 52.240 -54.869 314.008 1.00 34.71 ATOM 50 CA PHE I 74 50.882 -55.929 317.383 1.00 30.00 ATOM 51 CA VAL I 75 52.309 -55.690 320.885 1.00 30.02 ATOM 52 CA LEU I 76 50.870 -58.199 323.339 1.00 51.74 ATOM 53 CA THR I 77 51.715 -59.496 326.820 1.00 53.37 ATOM 54 CA LYS I 78 51.523 -63.180 327.859 1.00 72.72 ATOM 55 CA GLY I 79 49.019 -64.132 330.542 1.00 69.37 ATOM 56 CA GLY I 80 50.430 -67.607 331.060 1.00 77.19 ATOM 57 CA ASN I 81 53.690 -69.540 331.045 1.00 78.55 ATOM 58 CA GLY I 82 55.230 -71.885 328.475 1.00 69.67 ATOM 59 CA GLY I 83 53.160 -73.558 325.780 1.00 55.50 ATOM 60 CA THR I 84 50.146 -71.447 326.692 1.00 35.98 ATOM 61 CA THR I 85 50.044 -69.544 323.416 1.00 49.95 ATOM 62 CA TYR I 86 49.421 -70.553 319.789 1.00 64.60 ATOM 63 CA TYR I 87 49.801 -67.975 317.019 1.00 63.44 ATOM 64 CA PRO I 88 48.157 -65.161 319.078 1.00 70.70 ATOM 65 CA ALA I 89 48.988 -62.382 316.600 1.00 67.77 ATOM 66 CA GLU I 90 47.558 -64.480 313.791 1.00 70.15 ATOM 67 CA GLU I 91 44.343 -65.172 315.721 1.00 61.87 ATOM 68 CA LEU I 92 43.973 -61.506 316.756 1.00 91.36 ATOM 69 CA LEU I 93 43.506 -60.659 313.066 1.00 91.55 ATOM 70 CA GLN I 94 40.116 -62.373 312.822 1.00 62.52 ATOM 71 CA ASP I 95 39.656 -61.048 309.264 1.00 78.31 ATOM 72 CA VAL I 96 40.952 -58.478 306.779 1.00 86.86 ATOM 73 CA GLU I 97 38.986 -57.032 303.868 1.00 71.09 ATOM 74 CA LEU I 98 40.547 -55.273 300.875 1.00 75.72 ATOM 75 CA GLU I 99 38.268 -52.698 299.268 1.00 62.38 ATOM 76 CA ILE I 100 38.938 -50.537 296.190 1.00 69.63 ATOM 77 CA GLY I 101 36.585 -47.725 295.183 1.00 68.43 ATOM 78 CA GLY I 102 34.014 -49.043 297.628 1.00 65.59 ATOM 79 CA GLN I 103 34.140 -52.460 295.948 1.00 76.05 ATOM 80 CA ARG I 104 35.446 -55.470 297.829 1.00 78.15 ATOM 81 CA ILE I 105 38.356 -57.247 296.108 1.00 66.65 ATOM 82 CA ASP I 106 39.146 -59.941 298.675 1.00 62.22 ATOM 83 CA LYS I 107 38.764 -60.854 302.348 1.00 79.18 ATOM 84 CA HIS I 108 40.825 -63.169 304.559 1.00101.71 ATOM 85 CA TYR I 109 40.141 -64.852 307.879 1.00 88.35 ATOM 86 CA ASN I 110 41.831 -66.254 310.956 1.00 67.25 ATOM 87 CA ASP I 111 41.500 -69.852 309.929 1.00 74.29 ATOM 88 CA TRP I 112 42.679 -69.042 306.392 1.00101.60 ATOM 89 CA PHE I 113 46.017 -67.696 307.591 1.00 88.09 ATOM 90 CA ARG I 114 46.316 -70.844 309.724 1.00 70.52 ATOM 91 CA THR I 115 45.380 -73.100 306.786 1.00 71.97 ATOM 92 CA TYR I 116 47.660 -71.164 304.452 1.00 69.59 ATOM 93 CA ASP I 117 50.590 -71.569 306.823 1.00 70.00 ATOM 94 CA ALA I 118 49.915 -75.298 307.239 1.00 55.30 ATOM 95 CA LEU I 119 49.757 -75.800 303.489 1.00 35.49 ATOM 96 CA PHE I 120 51.925 -73.188 301.726 1.00 44.47 ATOM 97 CA ARG I 121 54.609 -72.056 304.149 1.00 52.96 ATOM 98 CA MET I 122 57.507 -74.377 304.987 1.00 61.07 ATOM 99 CA ASN I 123 60.874 -74.940 306.582 1.00 82.33 ATOM 100 CA ASP I 124 62.697 -71.954 308.170 1.00 78.98 ATOM 101 CA ASP I 125 60.290 -69.519 306.525 1.00 58.27 ATOM 102 CA ARG I 126 57.423 -71.167 308.384 1.00 59.31 ATOM 103 CA TYR I 127 59.400 -71.055 311.616 1.00 67.79 ATOM 104 CA ASN I 128 60.249 -67.389 311.075 1.00 54.45 ATOM 105 CA TYR I 129 56.523 -66.781 310.561 1.00 54.82 ATOM 106 CA ARG I 130 55.777 -68.265 313.979 1.00 53.94 ATOM 107 CA ARG I 131 58.445 -66.055 315.554 1.00 44.24 ATOM 108 CA MET I 132 56.576 -63.116 314.018 1.00 53.80 ATOM 109 CA THR I 133 53.235 -64.507 315.156 1.00 61.66 ATOM 110 CA ASP I 134 53.909 -65.624 318.746 1.00 66.19 ATOM 111 CA TRP I 135 56.155 -66.485 321.652 1.00 68.82 ATOM 112 CA VAL I 136 58.575 -69.251 320.704 1.00 62.90 ATOM 113 CA ASN I 137 61.128 -69.119 323.546 1.00 73.21 ATOM 114 CA ASN I 138 59.148 -70.466 326.513 1.00 69.94 ATOM 115 CA GLU I 139 58.227 -67.025 327.798 1.00 66.79 ATOM 116 CA LEU I 140 56.400 -66.696 331.113 1.00 68.71 ATOM 117 CA VAL I 141 53.555 -64.517 332.364 1.00 65.54 ATOM 118 CA GLY I 142 54.094 -60.816 331.739 1.00 41.25 ATOM 119 CA ALA I 143 56.382 -61.246 328.725 1.00 56.43 ATOM 120 CA GLN I 144 55.686 -58.493 326.143 1.00 67.04 ATOM 121 CA LYS I 145 56.476 -59.048 322.459 1.00 77.20 ATOM 122 CA ARG I 146 56.308 -57.264 319.091 1.00 72.47 ATOM 123 CA PHE I 147 54.310 -59.219 316.508 1.00 58.93 ATOM 124 CA TYR I 148 54.278 -58.815 312.737 1.00 64.32 ATOM 125 CA VAL I 149 51.449 -60.351 310.744 1.00 65.25 ATOM 126 CA PRO I 150 52.108 -60.198 306.967 1.00 62.96 ATOM 127 CA LEU I 151 49.011 -59.971 304.747 1.00 45.24 ATOM 128 CA ILE I 152 48.646 -62.320 301.775 1.00 42.29 ATOM 129 CA PHE I 153 46.531 -60.475 299.183 1.00 59.47 ATOM 130 CA PHE I 154 47.458 -60.712 295.490 1.00 81.98 ATOM 131 CA PHE I 155 49.620 -57.588 295.545 1.00 77.58 ATOM 132 CA ASN I 156 51.292 -58.708 298.811 1.00 58.35 ATOM 133 CA GLN I 157 52.543 -61.965 297.274 1.00 71.92 ATOM 134 CA THR I 158 54.273 -60.672 294.125 1.00 91.43 ATOM 135 CA PRO I 159 55.849 -57.368 293.171 1.00 82.71 ATOM 136 CA GLY I 160 54.583 -58.231 289.680 1.00101.51 ATOM 137 CA LEU I 161 51.030 -57.637 290.868 1.00 92.19 ATOM 138 CA ALA I 162 51.883 -54.426 292.721 1.00 78.56 ATOM 139 CA LEU I 163 48.672 -52.387 293.099 1.00 92.35 ATOM 140 CA PRO I 164 49.178 -49.115 291.117 1.00 87.77 ATOM 141 CA LEU I 165 47.952 -46.262 293.324 1.00 81.26 ATOM 142 CA ILE I 166 48.843 -43.698 290.673 1.00 77.60 ATOM 143 CA ALA I 167 46.410 -45.476 288.371 1.00 52.50 ATOM 144 CA LEU I 168 43.623 -45.379 290.972 1.00 55.14 ATOM 145 CA GLN I 169 43.471 -41.606 291.351 1.00 75.44 ATOM 146 CA TYR I 170 39.702 -41.802 291.945 1.00 86.04 ATOM 147 CA HIS I 171 39.413 -45.106 293.797 1.00 67.08 ATOM 148 CA GLU I 172 40.178 -45.271 297.515 1.00 62.38 ATOM 149 CA VAL I 173 41.990 -48.371 298.731 1.00 73.93 ATOM 150 CA LYS I 174 40.868 -49.456 302.192 1.00 62.96 ATOM 151 CA LEU I 175 41.426 -52.281 304.655 1.00 70.32 ATOM 152 CA TYR I 176 38.920 -53.442 307.264 1.00 48.14 ATOM 153 CA PHE I 177 40.179 -55.405 310.274 1.00 44.40 ATOM 154 CA THR I 178 38.148 -57.178 312.938 1.00 28.44 ATOM 155 CA LEU I 179 40.144 -58.064 316.038 1.00 54.64 ATOM 156 CA ALA I 180 39.388 -61.290 317.894 1.00 60.18 ATOM 157 CA SER I 181 37.708 -60.759 321.250 1.00 74.92 ATOM 158 CA GLN I 182 39.337 -63.683 323.075 1.00 74.05 ATOM 159 CA VAL I 183 42.892 -64.801 322.395 1.00 76.09 ATOM 160 CA GLN I 184 44.192 -67.779 324.388 1.00 40.18 ATOM 161 CA GLY I 185 47.215 -67.133 326.580 1.00 52.41 ATOM 162 CA VAL I 186 46.821 -63.379 326.216 1.00 84.53 ATOM 163 CA ASN I 187 43.222 -62.299 326.759 1.00 79.16 ATOM 164 CA TYR I 188 41.750 -65.431 328.338 1.00 62.33 ATOM 165 CA ASN I 189 42.832 -68.864 329.552 1.00 52.41 ATOM 166 CA GLY I 190 40.152 -71.146 328.209 1.00 43.32 ATOM 167 CA SER I 191 36.781 -69.559 328.940 1.00 62.96 ATOM 168 CA SER I 192 38.203 -67.631 331.924 1.00 79.89 ATOM 169 CA ALA I 193 39.294 -64.049 331.352 1.00 67.79 ATOM 170 CA ILE I 194 42.800 -63.151 332.562 1.00 45.33 ATOM 171 CA ALA I 195 42.667 -60.205 334.954 1.00 51.66 ATOM 172 CA GLY I 196 44.850 -57.197 334.198 1.00 60.26 ATOM 173 CA ALA I 197 45.128 -58.415 330.597 1.00 36.62 ATOM 174 CA ALA I 198 46.409 -55.466 328.583 1.00 34.54 ATOM 175 CA GLN I 199 44.657 -54.369 325.404 1.00 50.60 ATOM 176 CA PRO I 200 46.467 -54.826 322.083 1.00 61.82 ATOM 177 CA THR I 201 48.533 -52.090 320.414 1.00 39.03 ATOM 178 CA MET I 202 48.217 -52.049 316.638 1.00 46.27 ATOM 179 CA SER I 203 50.184 -50.505 313.772 1.00 37.39 ATOM 180 CA VAL I 204 49.737 -50.849 309.992 1.00 69.01 ATOM 181 CA TRP I 205 52.687 -50.534 307.607 1.00 61.64 ATOM 182 CA VAL I 206 52.626 -50.426 303.804 1.00 77.81 ATOM 183 CA ASP I 207 55.537 -50.789 301.367 1.00 75.94 ATOM 184 CA TYR I 208 55.532 -48.256 298.520 1.00 54.29 ATOM 185 CA ILE I 209 57.381 -48.403 295.236 1.00 70.98 ATOM 186 CA PHE I 210 58.499 -45.074 293.802 1.00 63.82 ATOM 187 CA LEU I 211 58.856 -45.323 290.046 1.00 66.28 ATOM 188 CA ASP I 212 60.871 -43.352 287.540 1.00 63.18 ATOM 189 CA THR I 213 59.291 -40.728 285.247 1.00 63.16 ATOM 190 CA GLN I 214 59.235 -43.041 282.245 1.00 82.39 ATOM 191 CA GLU I 215 57.223 -45.835 283.846 1.00 73.46 ATOM 192 CA ARG I 216 55.178 -43.433 285.996 1.00 64.36 ATOM 193 CA THR I 217 53.705 -41.849 282.884 1.00 82.36 ATOM 194 CA ARG I 218 52.769 -45.247 281.522 1.00 78.75 ATOM 195 CA PHE I 219 51.171 -46.440 284.763 1.00 61.56 ATOM 196 CA ALA I 220 49.134 -43.249 284.752 1.00 76.64 ATOM 197 CA GLN I 221 48.329 -43.199 281.052 1.00 88.34 TER