HEADER VIRUS 04-NOV-09 3KK5 TITLE Crystal structure of PBCV-1 VP54 fitted into a cryo-EM reconstruction TITLE 2 of the virophage Sputnik COMPND MOL_ID: 1; COMPND 2 MOLECULE: Major capsid protein; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L, M; EXPDTA ELECTRON MICROSCOPY DBREF 3KK5 J 1 437 UNP P30328 MCP_PBCV1 1 437 SEQRES 1 J 197 THR PHE PHE LYS THR VAL TYR ARG ARG TYR THR ASN PHE SEQRES 2 J 197 ALA ILE GLU SER ILE GLN GLN THR ILE ASN GLY SER VAL SEQRES 3 J 197 GLY PHE GLY ASN LYS VAL SER THR GLN ILE SER ARG ASN SEQRES 4 J 197 GLY ASP LEU ILE THR ASP ILE VAL VAL GLU PHE VAL LEU SEQRES 5 J 197 THR LYS GLY GLY ASN GLY GLY THR THR TYR TYR PRO ALA SEQRES 6 J 197 GLU GLU LEU LEU GLN ASP VAL GLU LEU GLU ILE GLY GLY SEQRES 7 J 197 GLN ARG ILE ASP LYS HIS TYR ASN ASP TRP PHE ARG THR SEQRES 8 J 197 TYR ASP ALA LEU PHE ARG MET ASN ASP ASP ARG TYR ASN SEQRES 9 J 197 TYR ARG ARG MET THR ASP TRP VAL ASN ASN GLU LEU VAL SEQRES 10 J 197 GLY ALA GLN LYS ARG PHE TYR VAL PRO LEU ILE PHE PHE SEQRES 11 J 197 PHE ASN GLN THR PRO GLY LEU ALA LEU PRO LEU ILE ALA SEQRES 12 J 197 LEU GLN TYR HIS GLU VAL LYS LEU TYR PHE THR LEU ALA SEQRES 13 J 197 SER GLN VAL GLN GLY VAL ASN TYR ASN GLY SER SER ALA SEQRES 14 J 197 ILE ALA GLY ALA ALA GLN PRO THR MET SER VAL TRP VAL SEQRES 15 J 197 ASP TYR ILE PHE LEU ASP THR GLN GLU ARG THR ARG PHE SEQRES 16 J 197 ALA GLN ATOM 1 CA THR J 25 60.253 -54.401 285.129 1.00 69.17 ATOM 2 CA PHE J 26 59.448 -56.311 288.325 1.00 70.14 ATOM 3 CA PHE J 27 56.066 -54.669 288.753 1.00 78.27 ATOM 4 CA LYS J 28 54.018 -55.814 285.770 1.00 75.63 ATOM 5 CA THR J 29 54.346 -59.541 285.244 1.00 92.09 ATOM 6 CA VAL J 30 52.620 -60.913 282.144 1.00 80.25 ATOM 7 CA TYR J 31 51.736 -64.528 282.967 1.00 86.05 ATOM 8 CA ARG J 32 51.577 -67.030 280.140 1.00 87.27 ATOM 9 CA ARG J 33 48.532 -68.763 278.701 1.00 65.83 ATOM 10 CA TYR J 34 48.615 -72.548 278.624 1.00 57.27 ATOM 11 CA THR J 35 46.894 -75.538 277.063 1.00 60.48 ATOM 12 CA ASN J 36 43.558 -76.478 278.660 1.00 70.05 ATOM 13 CA PHE J 37 43.712 -79.747 280.583 1.00 73.52 ATOM 14 CA ALA J 38 42.352 -81.786 283.486 1.00 75.52 ATOM 15 CA ILE J 39 43.904 -84.293 285.868 1.00 93.99 ATOM 16 CA GLU J 40 42.550 -87.397 287.541 1.00 88.53 ATOM 17 CA SER J 41 44.098 -90.161 289.627 1.00 75.33 ATOM 18 CA ILE J 42 42.666 -93.518 288.605 1.00 44.02 ATOM 19 CA GLN J 43 43.308 -96.836 290.333 1.00 37.97 ATOM 20 CA GLN J 44 45.131 -99.574 288.459 1.00 48.70 ATOM 21 CA THR J 45 44.323-103.267 288.253 1.00 48.20 ATOM 22 CA ILE J 46 47.035-105.158 290.082 1.00 50.44 ATOM 23 CA ASN J 47 47.864-108.498 288.441 1.00 43.06 ATOM 24 CA GLY J 48 48.927-111.463 290.554 1.00 42.16 ATOM 25 CA SER J 49 48.693-112.245 294.241 1.00 44.60 ATOM 26 CA VAL J 50 49.893-109.486 296.575 1.00 55.11 ATOM 27 CA GLY J 51 52.131-110.707 299.375 1.00 66.75 ATOM 28 CA PHE J 52 55.662-110.733 300.778 1.00 93.06 ATOM 29 CA GLY J 53 58.020-112.232 298.215 1.00 67.36 ATOM 30 CA ASN J 54 55.547-112.100 295.366 1.00 56.78 ATOM 31 CA LYS J 55 56.000-110.557 291.933 1.00 33.74 ATOM 32 CA VAL J 56 53.049-108.527 290.703 1.00 31.48 ATOM 33 CA SER J 57 52.437-106.398 287.615 1.00 25.71 ATOM 34 CA THR J 58 50.086-103.864 286.051 1.00 49.07 ATOM 35 CA GLN J 59 49.280-102.747 282.517 1.00 66.62 ATOM 36 CA ILE J 60 48.382 -99.058 282.669 1.00 99.08 ATOM 37 CA SER J 61 44.811 -98.633 281.448 1.00 77.12 ATOM 38 CA ARG J 62 44.111 -96.113 278.699 1.00 60.71 ATOM 39 CA ASN J 63 41.789 -93.778 280.581 1.00 53.18 ATOM 40 CA GLY J 64 43.620 -90.531 280.030 1.00 47.97 ATOM 41 CA ASP J 65 45.738 -89.024 277.294 1.00 65.39 ATOM 42 CA LEU J 66 48.954 -88.625 279.295 1.00 72.06 ATOM 43 CA ILE J 67 50.240 -90.065 282.554 1.00 66.65 ATOM 44 CA THR J 68 52.450 -88.425 285.143 1.00 67.09 ATOM 45 CA ASP J 69 52.462 -89.380 288.828 1.00 82.38 ATOM 46 CA ILE J 70 52.093 -92.981 290.002 1.00 84.09 ATOM 47 CA VAL J 71 51.636 -93.829 293.682 1.00 75.10 ATOM 48 CA VAL J 72 51.741 -97.271 295.229 1.00 55.72 ATOM 49 CA GLU J 73 49.571 -97.583 298.342 1.00 52.93 ATOM 50 CA PHE J 74 50.338-100.090 301.075 1.00 46.34 ATOM 51 CA VAL J 75 48.606-100.890 304.350 1.00 48.96 ATOM 52 CA LEU J 76 50.838-102.512 306.953 1.00 57.00 ATOM 53 CA THR J 77 50.686-103.269 310.684 1.00 67.86 ATOM 54 CA LYS J 78 53.613-102.789 313.107 1.00 85.53 ATOM 55 CA GLY J 79 55.021-105.867 314.811 1.00 85.19 ATOM 56 CA GLY J 80 57.101-103.919 317.301 1.00 80.57 ATOM 57 CA ASN J 81 57.100-100.727 319.342 1.00 65.58 ATOM 58 CA GLY J 82 58.898 -97.408 318.854 1.00 66.86 ATOM 59 CA GLY J 83 61.960 -97.084 316.647 1.00 58.51 ATOM 60 CA THR J 84 61.479-100.613 315.346 1.00 57.45 ATOM 61 CA THR J 85 60.707 -99.575 311.783 1.00 53.69 ATOM 62 CA TYR J 86 62.714 -97.832 309.042 1.00 46.96 ATOM 63 CA TYR J 87 61.024 -96.897 305.768 1.00 52.63 ATOM 64 CA PRO J 88 59.007-100.177 305.594 1.00 67.04 ATOM 65 CA ALA J 89 56.854 -99.103 302.631 1.00 68.27 ATOM 66 CA GLU J 90 59.977 -98.079 300.752 1.00 75.80 ATOM 67 CA GLU J 91 61.698-101.408 301.462 1.00 70.54 ATOM 68 CA LEU J 92 58.577-103.417 300.536 1.00 97.75 ATOM 69 CA LEU J 93 58.968-102.111 296.972 1.00 90.37 ATOM 70 CA GLN J 94 62.142-104.103 296.301 1.00 59.37 ATOM 71 CA ASP J 95 62.100-103.014 292.638 1.00 72.25 ATOM 72 CA VAL J 96 59.896-101.505 289.930 1.00 82.33 ATOM 73 CA GLU J 97 60.347-101.982 286.188 1.00 67.11 ATOM 74 CA LEU J 98 58.807 -99.740 283.528 1.00 78.95 ATOM 75 CA GLU J 99 58.165-101.509 280.232 1.00 67.32 ATOM 76 CA ILE J 100 56.751-100.052 276.999 1.00 71.69 ATOM 77 CA GLY J 101 55.810-102.274 274.058 1.00 62.63 ATOM 78 CA GLY J 102 57.610-105.165 275.708 1.00 65.77 ATOM 79 CA GLN J 103 60.798-103.089 275.909 1.00 61.90 ATOM 80 CA ARG J 104 62.223-102.086 279.267 1.00 68.20 ATOM 81 CA ILE J 105 62.665 -98.321 279.717 1.00 71.72 ATOM 82 CA ASP J 106 63.919 -98.190 283.306 1.00 69.17 ATOM 83 CA LYS J 107 64.007-100.137 286.574 1.00 82.24 ATOM 84 CA HIS J 108 64.400 -98.936 290.166 1.00 93.98 ATOM 85 CA TYR J 109 65.362-100.688 293.382 1.00 68.31 ATOM 86 CA ASN J 110 64.971-100.528 297.140 1.00 55.64 ATOM 87 CA ASP J 111 68.383 -99.098 297.788 1.00 47.82 ATOM 88 CA TRP J 112 67.954 -96.564 294.966 1.00 57.35 ATOM 89 CA PHE J 113 64.887 -94.997 296.563 1.00 77.45 ATOM 90 CA ARG J 114 66.869 -94.880 299.822 1.00 64.01 ATOM 91 CA THR J 115 69.906 -93.347 298.089 1.00 51.79 ATOM 92 CA TYR J 116 67.708 -90.941 296.151 1.00 62.81 ATOM 93 CA ASP J 117 66.035 -89.755 299.337 1.00 75.09 ATOM 94 CA ALA J 118 69.383 -89.311 301.097 1.00 64.26 ATOM 95 CA LEU J 119 70.766 -87.299 298.202 1.00 35.28 ATOM 96 CA PHE J 120 67.921 -85.500 296.383 1.00 49.42 ATOM 97 CA ARG J 121 65.072 -85.024 298.839 1.00 69.17 ATOM 98 CA MET J 122 65.372 -82.441 301.616 1.00 84.56 ATOM 99 CA ASN J 123 63.797 -80.449 304.398 1.00 95.65 ATOM 100 CA ASP J 124 60.021 -80.808 305.027 1.00 83.92 ATOM 101 CA ASP J 125 59.572 -82.615 301.718 1.00 61.08 ATOM 102 CA ARG J 126 61.934 -85.323 302.925 1.00 75.19 ATOM 103 CA TYR J 127 60.100 -85.507 306.238 1.00 80.36 ATOM 104 CA ASN J 128 56.740 -85.725 304.465 1.00 58.83 ATOM 105 CA TYR J 129 58.205 -88.585 302.414 1.00 54.91 ATOM 106 CA ARG J 130 59.012 -90.497 305.598 1.00 70.80 ATOM 107 CA ARG J 131 55.470 -89.933 306.871 1.00 62.07 ATOM 108 CA MET J 132 54.303 -91.536 303.616 1.00 50.79 ATOM 109 CA THR J 133 56.860 -94.321 303.952 1.00 62.66 ATOM 110 CA ASP J 134 56.613 -95.324 307.630 1.00 70.55 ATOM 111 CA TRP J 135 55.534 -94.814 311.205 1.00 80.33 ATOM 112 CA VAL J 136 56.863 -91.524 312.552 1.00 77.30 ATOM 113 CA ASN J 137 54.817 -91.051 315.745 1.00 82.65 ATOM 114 CA ASN J 138 56.226 -93.745 318.047 1.00 71.88 ATOM 115 CA GLU J 139 53.509 -96.247 317.224 1.00 67.38 ATOM 116 CA LEU J 140 53.364 -99.540 319.115 1.00 65.37 ATOM 117 CA VAL J 141 52.660-103.134 318.125 1.00 73.13 ATOM 118 CA GLY J 142 49.449-103.564 316.158 1.00 69.82 ATOM 119 CA ALA J 143 49.378-100.035 314.723 1.00 78.50 ATOM 120 CA GLN J 144 48.032-100.105 311.132 1.00 87.39 ATOM 121 CA LYS J 145 48.971 -97.363 308.658 1.00 87.41 ATOM 122 CA ARG J 146 48.355 -96.293 305.049 1.00 83.51 ATOM 123 CA PHE J 147 51.588 -95.878 303.085 1.00 64.53 ATOM 124 CA TYR J 148 52.154 -94.046 299.812 1.00 65.59 ATOM 125 CA VAL J 149 55.311 -94.730 297.838 1.00 54.93 ATOM 126 CA PRO J 150 55.745 -92.271 294.925 1.00 64.80 ATOM 127 CA LEU J 151 57.615 -93.613 291.880 1.00 58.38 ATOM 128 CA ILE J 152 60.457 -91.583 290.372 1.00 56.89 ATOM 129 CA PHE J 153 60.578 -92.475 286.656 1.00 58.92 ATOM 130 CA PHE J 154 61.185 -89.720 284.085 1.00 71.61 ATOM 131 CA PHE J 155 57.486 -89.049 283.524 1.00 74.44 ATOM 132 CA ASN J 156 56.824 -89.094 287.300 1.00 62.61 ATOM 133 CA GLN J 157 59.283 -86.257 287.959 1.00 73.50 ATOM 134 CA THR J 158 58.085 -83.649 285.439 1.00 96.66 ATOM 135 CA PRO J 159 54.768 -82.960 283.760 1.00 88.33 ATOM 136 CA GLY J 160 56.936 -81.841 280.830 1.00 97.62 ATOM 137 CA LEU J 161 57.926 -85.457 280.238 1.00 89.79 ATOM 138 CA ALA J 162 54.384 -86.786 280.631 1.00 74.87 ATOM 139 CA LEU J 163 54.186 -90.166 278.854 1.00 85.11 ATOM 140 CA PRO J 164 51.670 -89.770 275.956 1.00 83.45 ATOM 141 CA LEU J 165 49.377 -92.811 276.040 1.00 80.66 ATOM 142 CA ILE J 166 47.413 -91.534 273.051 1.00 64.35 ATOM 143 CA ALA J 167 50.651 -91.668 271.079 1.00 51.51 ATOM 144 CA LEU J 168 51.342 -95.263 272.139 1.00 51.71 ATOM 145 CA GLN J 169 48.177 -96.791 270.710 1.00 46.09 ATOM 146 CA TYR J 170 50.074-100.008 269.906 1.00 54.26 ATOM 147 CA HIS J 171 52.541-100.156 272.790 1.00 51.84 ATOM 148 CA GLU J 172 51.424-101.460 276.181 1.00 55.53 ATOM 149 CA VAL J 173 52.825 -99.681 279.220 1.00 82.58 ATOM 150 CA LYS J 174 53.479-102.042 282.120 1.00 69.88 ATOM 151 CA LEU J 175 54.982-101.997 285.599 1.00 65.47 ATOM 152 CA TYR J 176 56.581-104.973 287.334 1.00 35.63 ATOM 153 CA PHE J 177 56.889-104.940 291.129 1.00 51.85 ATOM 154 CA THR J 178 58.752-107.376 293.355 1.00 45.68 ATOM 155 CA LEU J 179 57.772-107.153 297.012 1.00 80.26 ATOM 156 CA ALA J 180 60.406-107.697 299.696 1.00 66.16 ATOM 157 CA SER J 181 60.010-110.957 301.585 1.00 73.29 ATOM 158 CA GLN J 182 61.210-109.701 304.978 1.00 67.35 ATOM 159 CA VAL J 183 60.541-106.184 306.217 1.00 64.43 ATOM 160 CA GLN J 184 61.912-105.262 309.650 1.00 41.93 ATOM 161 CA GLY J 185 59.355-104.241 312.255 1.00 70.61 ATOM 162 CA VAL J 186 56.502-105.560 310.136 1.00 84.81 ATOM 163 CA ASN J 187 57.261-109.028 308.785 1.00 73.84 ATOM 164 CA TYR J 188 60.237-110.014 310.936 1.00 61.96 ATOM 165 CA ASN J 189 62.280-108.704 313.859 1.00 66.27 ATOM 166 CA GLY J 190 65.834-109.378 312.802 1.00 51.76 ATOM 167 CA SER J 191 66.012-112.925 311.460 1.00 64.65 ATOM 168 CA SER J 192 62.993-113.996 313.552 1.00 77.57 ATOM 169 CA ALA J 193 59.592-113.979 311.884 1.00 64.64 ATOM 170 CA ILE J 194 56.817-112.145 313.749 1.00 51.90 ATOM 171 CA ALA J 195 53.860-114.454 314.337 1.00 47.97 ATOM 172 CA GLY J 196 50.440-113.295 313.174 1.00 55.93 ATOM 173 CA ALA J 197 52.164-110.791 310.880 1.00 35.41 ATOM 174 CA ALA J 198 49.540-109.663 308.385 1.00 47.58 ATOM 175 CA GLN J 199 50.242-109.717 304.659 1.00 51.39 ATOM 176 CA PRO J 200 50.505-106.398 302.809 1.00 54.60 ATOM 177 CA THR J 201 47.584-104.769 300.979 1.00 50.83 ATOM 178 CA MET J 202 48.597-103.038 297.762 1.00 61.94 ATOM 179 CA SER J 203 47.002-100.472 295.451 1.00 59.03 ATOM 180 CA VAL J 204 48.400 -98.723 292.351 1.00 61.32 ATOM 181 CA TRP J 205 47.233 -95.245 291.339 1.00 59.19 ATOM 182 CA VAL J 206 48.068 -93.323 288.164 1.00 83.41 ATOM 183 CA ASP J 207 47.499 -89.632 287.398 1.00 83.91 ATOM 184 CA TYR J 208 46.054 -88.942 283.939 1.00 68.14 ATOM 185 CA ILE J 209 46.030 -85.713 281.997 1.00 73.68 ATOM 186 CA PHE J 210 43.030 -85.141 279.747 1.00 70.23 ATOM 187 CA LEU J 211 43.945 -82.799 276.919 1.00 78.60 ATOM 188 CA ASP J 212 41.886 -80.523 274.730 1.00 63.74 ATOM 189 CA THR J 213 41.019 -81.399 271.106 1.00 56.18 ATOM 190 CA GLN J 214 43.682 -79.122 269.666 1.00 75.98 ATOM 191 CA GLU J 215 46.642 -80.655 271.487 1.00 80.52 ATOM 192 CA ARG J 216 45.144 -84.166 271.423 1.00 80.66 ATOM 193 CA THR J 217 45.287 -84.194 267.639 1.00 78.56 ATOM 194 CA ARG J 218 48.908 -83.125 267.705 1.00 83.91 ATOM 195 CA PHE J 219 49.935 -85.709 270.301 1.00 71.90 ATOM 196 CA ALA J 220 48.288 -88.329 268.121 1.00 66.77 ATOM 197 CA GLN J 221 49.515 -87.027 264.783 1.00 70.95 TER