HEADER VIRUS 04-NOV-09 3KK5 TITLE Crystal structure of PBCV-1 VP54 fitted into a cryo-EM reconstruction TITLE 2 of the virophage Sputnik COMPND MOL_ID: 1; COMPND 2 MOLECULE: Major capsid protein; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L, M; EXPDTA ELECTRON MICROSCOPY DBREF 3KK5 K 1 437 UNP P30328 MCP_PBCV1 1 437 SEQRES 1 K 197 THR PHE PHE LYS THR VAL TYR ARG ARG TYR THR ASN PHE SEQRES 2 K 197 ALA ILE GLU SER ILE GLN GLN THR ILE ASN GLY SER VAL SEQRES 3 K 197 GLY PHE GLY ASN LYS VAL SER THR GLN ILE SER ARG ASN SEQRES 4 K 197 GLY ASP LEU ILE THR ASP ILE VAL VAL GLU PHE VAL LEU SEQRES 5 K 197 THR LYS GLY GLY ASN GLY GLY THR THR TYR TYR PRO ALA SEQRES 6 K 197 GLU GLU LEU LEU GLN ASP VAL GLU LEU GLU ILE GLY GLY SEQRES 7 K 197 GLN ARG ILE ASP LYS HIS TYR ASN ASP TRP PHE ARG THR SEQRES 8 K 197 TYR ASP ALA LEU PHE ARG MET ASN ASP ASP ARG TYR ASN SEQRES 9 K 197 TYR ARG ARG MET THR ASP TRP VAL ASN ASN GLU LEU VAL SEQRES 10 K 197 GLY ALA GLN LYS ARG PHE TYR VAL PRO LEU ILE PHE PHE SEQRES 11 K 197 PHE ASN GLN THR PRO GLY LEU ALA LEU PRO LEU ILE ALA SEQRES 12 K 197 LEU GLN TYR HIS GLU VAL LYS LEU TYR PHE THR LEU ALA SEQRES 13 K 197 SER GLN VAL GLN GLY VAL ASN TYR ASN GLY SER SER ALA SEQRES 14 K 197 ILE ALA GLY ALA ALA GLN PRO THR MET SER VAL TRP VAL SEQRES 15 K 197 ASP TYR ILE PHE LEU ASP THR GLN GLU ARG THR ARG PHE SEQRES 16 K 197 ALA GLN ATOM 1 CA THR K 25 115.273 -41.510 288.625 1.00 68.05 ATOM 2 CA PHE K 26 116.853 -42.956 291.776 1.00 67.42 ATOM 3 CA PHE K 27 116.998 -46.477 290.396 1.00 76.26 ATOM 4 CA LYS K 28 119.401 -46.296 287.464 1.00 77.21 ATOM 5 CA THR K 29 122.543 -44.415 288.391 1.00 86.33 ATOM 6 CA VAL K 30 125.003 -43.842 285.548 1.00 71.45 ATOM 7 CA TYR K 31 128.437 -43.606 287.181 1.00 82.18 ATOM 8 CA ARG K 32 131.086 -41.481 285.517 1.00 79.30 ATOM 9 CA ARG K 33 134.252 -42.614 283.775 1.00 59.33 ATOM 10 CA TYR K 34 137.498 -41.117 285.029 1.00 65.12 ATOM 11 CA THR K 35 141.136 -40.666 284.079 1.00 69.13 ATOM 12 CA ASN K 36 143.323 -43.747 284.611 1.00 69.24 ATOM 13 CA PHE K 37 145.803 -43.320 287.452 1.00 61.65 ATOM 14 CA ALA K 38 147.804 -45.025 290.197 1.00 62.00 ATOM 15 CA ILE K 39 148.885 -43.974 293.674 1.00 78.90 ATOM 16 CA GLU K 40 151.982 -44.703 295.710 1.00 77.99 ATOM 17 CA SER K 41 153.330 -43.421 299.018 1.00 72.91 ATOM 18 CA ILE K 42 157.070 -42.855 298.765 1.00 46.21 ATOM 19 CA GLN K 43 159.383 -41.931 301.630 1.00 33.86 ATOM 20 CA GLN K 44 161.143 -38.579 301.571 1.00 52.57 ATOM 21 CA THR K 45 164.758 -37.769 302.363 1.00 62.34 ATOM 22 CA ILE K 46 164.826 -35.755 305.561 1.00 48.72 ATOM 23 CA ASN K 47 167.554 -33.090 305.558 1.00 58.19 ATOM 24 CA GLY K 48 169.304 -32.135 308.786 1.00 51.25 ATOM 25 CA SER K 49 169.566 -33.768 312.186 1.00 51.82 ATOM 26 CA VAL K 50 166.266 -34.917 313.701 1.00 51.51 ATOM 27 CA GLY K 51 165.844 -33.982 317.349 1.00 67.42 ATOM 28 CA PHE K 52 163.968 -31.799 319.828 1.00 92.07 ATOM 29 CA GLY K 53 164.502 -28.152 318.938 1.00 64.30 ATOM 30 CA ASN K 54 165.982 -28.851 315.534 1.00 42.82 ATOM 31 CA LYS K 55 164.922 -27.444 312.178 1.00 33.31 ATOM 32 CA VAL K 56 164.762 -29.979 309.373 1.00 33.21 ATOM 33 CA SER K 57 163.656 -29.806 305.741 1.00 47.34 ATOM 34 CA THR K 58 162.818 -31.889 302.684 1.00 61.69 ATOM 35 CA GLN K 59 162.744 -31.290 298.943 1.00 65.50 ATOM 36 CA ILE K 60 159.964 -33.441 297.499 1.00 87.71 ATOM 37 CA SER K 61 161.485 -35.891 295.031 1.00 77.96 ATOM 38 CA ARG K 62 160.037 -36.091 291.529 1.00 61.38 ATOM 39 CA ASN K 63 158.863 -39.696 291.551 1.00 52.83 ATOM 40 CA GLY K 64 155.255 -39.164 290.613 1.00 51.75 ATOM 41 CA ASP K 65 153.327 -36.734 288.463 1.00 71.82 ATOM 42 CA LEU K 66 151.148 -35.240 291.208 1.00 68.44 ATOM 43 CA ILE K 67 151.306 -35.206 294.991 1.00 63.56 ATOM 44 CA THR K 68 148.456 -35.253 297.470 1.00 76.01 ATOM 45 CA ASP K 69 148.748 -36.621 301.010 1.00 86.37 ATOM 46 CA ILE K 70 151.874 -36.142 303.130 1.00 84.22 ATOM 47 CA VAL K 71 152.297 -37.927 306.464 1.00 78.54 ATOM 48 CA VAL K 72 155.004 -37.299 309.020 1.00 63.52 ATOM 49 CA GLU K 73 155.872 -40.386 311.074 1.00 54.25 ATOM 50 CA PHE K 74 157.279 -40.130 314.580 1.00 50.25 ATOM 51 CA VAL K 75 158.335 -42.764 317.092 1.00 56.03 ATOM 52 CA LEU K 76 158.294 -41.596 320.700 1.00 53.21 ATOM 53 CA THR K 77 158.485 -43.189 324.156 1.00 56.46 ATOM 54 CA LYS K 78 156.316 -42.158 327.139 1.00 79.31 ATOM 55 CA GLY K 79 158.061 -40.690 330.172 1.00 77.55 ATOM 56 CA GLY K 80 155.016 -40.908 332.411 1.00 82.37 ATOM 57 CA ASN K 81 151.961 -43.043 333.103 1.00 74.43 ATOM 58 CA GLY K 82 148.298 -42.593 332.179 1.00 66.44 ATOM 59 CA GLY K 83 146.863 -39.218 331.230 1.00 56.22 ATOM 60 CA THR K 84 150.331 -37.696 331.128 1.00 51.12 ATOM 61 CA THR K 85 150.314 -37.024 327.398 1.00 54.71 ATOM 62 CA TYR K 86 148.235 -34.769 325.124 1.00 60.62 ATOM 63 CA TYR K 87 148.710 -34.934 321.355 1.00 65.70 ATOM 64 CA PRO K 88 152.541 -35.260 321.609 1.00 62.83 ATOM 65 CA ALA K 89 153.072 -35.992 317.902 1.00 59.78 ATOM 66 CA GLU K 90 150.953 -32.985 317.020 1.00 71.27 ATOM 67 CA GLU K 91 152.904 -30.711 319.379 1.00 64.57 ATOM 68 CA LEU K 92 156.274 -32.039 318.153 1.00 84.43 ATOM 69 CA LEU K 93 155.467 -30.533 314.743 1.00 90.47 ATOM 70 CA GLN K 94 155.760 -26.938 315.958 1.00 71.54 ATOM 71 CA ASP K 95 155.362 -25.652 312.378 1.00 77.72 ATOM 72 CA VAL K 96 155.507 -26.708 308.727 1.00 79.87 ATOM 73 CA GLU K 97 156.240 -24.411 305.789 1.00 65.66 ATOM 74 CA LEU K 98 155.420 -25.225 302.164 1.00 84.18 ATOM 75 CA GLU K 99 157.731 -23.544 299.668 1.00 70.47 ATOM 76 CA ILE K 100 157.614 -23.697 295.855 1.00 76.59 ATOM 77 CA GLY K 101 160.409 -22.256 293.716 1.00 62.84 ATOM 78 CA GLY K 102 161.807 -20.518 296.777 1.00 53.77 ATOM 79 CA GLN K 103 158.451 -18.819 297.369 1.00 68.98 ATOM 80 CA ARG K 104 156.420 -19.623 300.456 1.00 78.44 ATOM 81 CA ILE K 105 152.884 -20.863 299.723 1.00 71.31 ATOM 82 CA ASP K 106 151.652 -21.590 303.248 1.00 64.49 ATOM 83 CA LYS K 107 152.827 -22.336 306.791 1.00 71.76 ATOM 84 CA HIS K 108 151.084 -24.151 309.649 1.00 89.41 ATOM 85 CA TYR K 109 151.674 -24.242 313.387 1.00 88.85 ATOM 86 CA ASN K 110 151.190 -26.379 316.467 1.00 72.52 ATOM 87 CA ASP K 111 148.219 -24.470 317.753 1.00 67.43 ATOM 88 CA TRP K 112 146.636 -24.423 314.279 1.00 89.57 ATOM 89 CA PHE K 113 146.527 -28.213 314.053 1.00 88.21 ATOM 90 CA ARG K 114 145.006 -28.195 317.552 1.00 69.59 ATOM 91 CA THR K 115 142.467 -25.507 316.593 1.00 58.31 ATOM 92 CA TYR K 116 141.723 -27.249 313.308 1.00 64.72 ATOM 93 CA ASP K 117 141.042 -30.526 315.088 1.00 70.73 ATOM 94 CA ALA K 118 138.795 -28.825 317.657 1.00 60.15 ATOM 95 CA LEU K 119 136.804 -27.098 314.935 1.00 37.10 ATOM 96 CA PHE K 120 136.876 -29.190 311.734 1.00 48.79 ATOM 97 CA ARG K 121 137.483 -32.804 312.704 1.00 60.65 ATOM 98 CA MET K 122 134.707 -34.820 314.350 1.00 70.94 ATOM 99 CA ASN K 123 133.343 -38.123 315.541 1.00 85.48 ATOM 100 CA ASP K 124 135.378 -41.314 314.876 1.00 72.48 ATOM 101 CA ASP K 125 137.633 -39.457 312.447 1.00 59.69 ATOM 102 CA ARG K 126 138.667 -37.130 315.258 1.00 61.15 ATOM 103 CA TYR K 127 139.232 -40.092 317.560 1.00 63.76 ATOM 104 CA ASN K 128 141.289 -41.871 314.903 1.00 50.38 ATOM 105 CA TYR K 129 143.351 -38.683 314.606 1.00 46.91 ATOM 106 CA ARG K 130 144.162 -38.823 318.317 1.00 60.71 ATOM 107 CA ARG K 131 145.197 -42.472 317.981 1.00 55.66 ATOM 108 CA MET K 132 147.609 -41.289 315.281 1.00 52.05 ATOM 109 CA THR K 133 148.742 -38.370 317.425 1.00 64.95 ATOM 110 CA ASP K 134 149.202 -39.925 320.882 1.00 66.78 ATOM 111 CA TRP K 135 148.765 -42.656 323.446 1.00 66.58 ATOM 112 CA VAL K 136 145.088 -43.435 323.967 1.00 76.05 ATOM 113 CA ASN K 137 145.205 -46.750 325.865 1.00 75.59 ATOM 114 CA ASN K 138 146.529 -45.706 329.289 1.00 63.07 ATOM 115 CA GLU K 139 150.118 -46.578 328.460 1.00 61.41 ATOM 116 CA LEU K 140 152.766 -46.373 331.181 1.00 65.85 ATOM 117 CA VAL K 141 156.354 -45.147 331.293 1.00 77.06 ATOM 118 CA GLY K 142 158.551 -46.644 328.591 1.00 61.09 ATOM 119 CA ALA K 143 155.737 -47.326 326.114 1.00 68.31 ATOM 120 CA GLN K 144 156.960 -46.694 322.531 1.00 77.57 ATOM 121 CA LYS K 145 154.491 -45.792 319.774 1.00 85.22 ATOM 122 CA ARG K 146 154.380 -44.986 316.050 1.00 80.03 ATOM 123 CA PHE K 147 152.747 -41.621 315.338 1.00 62.31 ATOM 124 CA TYR K 148 151.359 -40.304 312.060 1.00 61.52 ATOM 125 CA VAL K 149 150.715 -36.594 311.691 1.00 63.66 ATOM 126 CA PRO K 150 148.797 -35.784 308.466 1.00 62.37 ATOM 127 CA LEU K 151 149.495 -32.359 306.932 1.00 49.76 ATOM 128 CA ILE K 152 146.589 -30.117 305.931 1.00 55.48 ATOM 129 CA PHE K 153 147.834 -27.948 303.040 1.00 60.54 ATOM 130 CA PHE K 154 145.529 -27.267 300.077 1.00 79.83 ATOM 131 CA PHE K 155 146.802 -30.221 298.051 1.00 88.78 ATOM 132 CA ASN K 156 146.622 -32.510 301.123 1.00 74.84 ATOM 133 CA GLN K 157 142.891 -31.888 301.599 1.00 85.91 ATOM 134 CA THR K 158 141.571 -32.628 298.094 1.00 96.15 ATOM 135 CA PRO K 159 142.813 -34.757 295.220 1.00 72.79 ATOM 136 CA GLY K 160 141.222 -32.051 293.056 1.00 82.38 ATOM 137 CA LEU K 161 143.955 -29.647 294.122 1.00 90.44 ATOM 138 CA ALA K 162 146.755 -32.186 293.663 1.00 72.26 ATOM 139 CA LEU K 163 150.027 -30.267 293.199 1.00 76.33 ATOM 140 CA PRO K 164 151.312 -31.073 289.649 1.00 80.39 ATOM 141 CA LEU K 165 155.032 -31.830 289.945 1.00 68.79 ATOM 142 CA ILE K 166 155.299 -32.474 286.214 1.00 76.10 ATOM 143 CA ALA K 167 154.142 -28.900 285.684 1.00 69.58 ATOM 144 CA LEU K 168 156.766 -27.520 288.080 1.00 63.29 ATOM 145 CA GLN K 169 159.814 -28.826 286.234 1.00 79.77 ATOM 146 CA TYR K 170 161.803 -25.743 287.299 1.00 83.14 ATOM 147 CA HIS K 171 160.331 -25.063 290.735 1.00 72.01 ATOM 148 CA GLU K 172 161.511 -27.070 293.739 1.00 68.25 ATOM 149 CA VAL K 173 158.858 -28.026 296.276 1.00 83.58 ATOM 150 CA LYS K 174 160.174 -27.996 299.838 1.00 76.11 ATOM 151 CA LEU K 175 158.913 -28.436 303.384 1.00 86.97 ATOM 152 CA TYR K 176 160.472 -26.873 306.474 1.00 54.90 ATOM 153 CA PHE K 177 159.753 -28.417 309.879 1.00 61.22 ATOM 154 CA THR K 178 160.642 -27.073 313.307 1.00 45.72 ATOM 155 CA LEU K 179 160.399 -29.655 316.071 1.00 76.34 ATOM 156 CA ALA K 180 159.217 -28.602 319.526 1.00 77.63 ATOM 157 CA SER K 181 161.961 -28.606 322.140 1.00 80.71 ATOM 158 CA GLN K 182 159.809 -29.697 325.094 1.00 73.43 ATOM 159 CA VAL K 183 156.910 -32.110 324.741 1.00 77.16 ATOM 160 CA GLN K 184 154.961 -32.962 327.903 1.00 54.73 ATOM 161 CA GLY K 185 154.934 -36.613 328.921 1.00 67.07 ATOM 162 CA VAL K 186 157.751 -37.423 326.515 1.00 84.66 ATOM 163 CA ASN K 187 160.579 -34.905 326.788 1.00 81.33 ATOM 164 CA TYR K 188 159.692 -33.160 330.051 1.00 64.24 ATOM 165 CA ASN K 189 157.160 -33.373 332.870 1.00 56.04 ATOM 166 CA GLY K 190 156.185 -29.779 333.435 1.00 41.52 ATOM 167 CA SER K 191 159.360 -27.700 333.537 1.00 58.41 ATOM 168 CA SER K 192 161.438 -30.712 334.659 1.00 70.93 ATOM 169 CA ALA K 193 163.297 -32.661 331.999 1.00 62.17 ATOM 170 CA ILE K 194 162.778 -36.441 332.018 1.00 53.92 ATOM 171 CA ALA K 195 166.113 -38.240 332.270 1.00 57.79 ATOM 172 CA GLY K 196 166.921 -40.866 329.655 1.00 62.13 ATOM 173 CA ALA K 197 164.256 -39.325 327.413 1.00 50.99 ATOM 174 CA ALA K 198 164.898 -40.678 323.928 1.00 45.49 ATOM 175 CA GLN K 199 165.142 -38.343 320.948 1.00 47.95 ATOM 176 CA PRO K 200 162.409 -38.488 318.299 1.00 51.99 ATOM 177 CA THR K 201 162.664 -40.573 315.114 1.00 45.05 ATOM 178 CA MET K 202 161.140 -38.888 312.080 1.00 42.95 ATOM 179 CA SER K 203 160.020 -40.025 308.631 1.00 39.76 ATOM 180 CA VAL K 204 158.280 -38.094 305.828 1.00 48.95 ATOM 181 CA TRP K 205 155.974 -39.838 303.350 1.00 56.92 ATOM 182 CA VAL K 206 154.366 -38.383 300.223 1.00 74.67 ATOM 183 CA ASP K 207 151.557 -39.840 298.096 1.00 83.28 ATOM 184 CA TYR K 208 152.153 -39.630 294.338 1.00 65.07 ATOM 185 CA ILE K 209 149.644 -39.928 291.538 1.00 70.89 ATOM 186 CA PHE K 210 150.914 -41.491 288.321 1.00 64.11 ATOM 187 CA LEU K 211 148.856 -40.290 285.386 1.00 70.52 ATOM 188 CA ASP K 212 148.190 -41.752 281.975 1.00 63.96 ATOM 189 CA THR K 213 149.884 -40.426 278.809 1.00 71.32 ATOM 190 CA GLN K 214 146.836 -38.450 277.720 1.00 74.22 ATOM 191 CA GLU K 215 146.482 -36.365 280.875 1.00 75.86 ATOM 192 CA ARG K 216 150.249 -36.246 281.487 1.00 70.09 ATOM 193 CA THR K 217 150.748 -34.344 278.246 1.00 70.87 ATOM 194 CA ARG K 218 148.071 -31.861 279.220 1.00 71.50 ATOM 195 CA PHE K 219 149.441 -31.303 282.725 1.00 71.15 ATOM 196 CA ALA K 220 152.813 -30.639 281.136 1.00 73.15 ATOM 197 CA GLN K 221 151.577 -28.566 278.220 1.00 76.93 TER