HEADER VIRUS 04-NOV-09 3KK5 TITLE Crystal structure of PBCV-1 VP54 fitted into a cryo-EM reconstruction TITLE 2 of the virophage Sputnik COMPND MOL_ID: 1; COMPND 2 MOLECULE: Major capsid protein; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L, M; EXPDTA ELECTRON MICROSCOPY DBREF 3KK5 M 1 437 UNP P30328 MCP_PBCV1 1 437 SEQRES 1 M 197 THR PHE PHE LYS THR VAL TYR ARG ARG TYR THR ASN PHE SEQRES 2 M 197 ALA ILE GLU SER ILE GLN GLN THR ILE ASN GLY SER VAL SEQRES 3 M 197 GLY PHE GLY ASN LYS VAL SER THR GLN ILE SER ARG ASN SEQRES 4 M 197 GLY ASP LEU ILE THR ASP ILE VAL VAL GLU PHE VAL LEU SEQRES 5 M 197 THR LYS GLY GLY ASN GLY GLY THR THR TYR TYR PRO ALA SEQRES 6 M 197 GLU GLU LEU LEU GLN ASP VAL GLU LEU GLU ILE GLY GLY SEQRES 7 M 197 GLN ARG ILE ASP LYS HIS TYR ASN ASP TRP PHE ARG THR SEQRES 8 M 197 TYR ASP ALA LEU PHE ARG MET ASN ASP ASP ARG TYR ASN SEQRES 9 M 197 TYR ARG ARG MET THR ASP TRP VAL ASN ASN GLU LEU VAL SEQRES 10 M 197 GLY ALA GLN LYS ARG PHE TYR VAL PRO LEU ILE PHE PHE SEQRES 11 M 197 PHE ASN GLN THR PRO GLY LEU ALA LEU PRO LEU ILE ALA SEQRES 12 M 197 LEU GLN TYR HIS GLU VAL LYS LEU TYR PHE THR LEU ALA SEQRES 13 M 197 SER GLN VAL GLN GLY VAL ASN TYR ASN GLY SER SER ALA SEQRES 14 M 197 ILE ALA GLY ALA ALA GLN PRO THR MET SER VAL TRP VAL SEQRES 15 M 197 ASP TYR ILE PHE LEU ASP THR GLN GLU ARG THR ARG PHE SEQRES 16 M 197 ALA GLN ATOM 1 CA THR M 25 123.646 -19.046 293.863 1.00 71.17 ATOM 2 CA PHE M 26 123.195 -20.728 297.253 1.00 71.34 ATOM 3 CA PHE M 27 119.825 -19.124 297.885 1.00 71.81 ATOM 4 CA LYS M 28 117.537 -20.528 295.201 1.00 74.50 ATOM 5 CA THR M 29 117.911 -24.276 294.916 1.00 87.20 ATOM 6 CA VAL M 30 115.937 -25.907 292.102 1.00 78.14 ATOM 7 CA TYR M 31 115.229 -29.468 293.265 1.00 84.99 ATOM 8 CA ARG M 32 114.871 -32.176 290.654 1.00 87.19 ATOM 9 CA ARG M 33 111.749 -34.068 289.641 1.00 65.09 ATOM 10 CA TYR M 34 111.926 -37.847 289.829 1.00 64.42 ATOM 11 CA THR M 35 110.143 -40.976 288.659 1.00 73.52 ATOM 12 CA ASN M 36 107.000 -41.859 290.634 1.00 74.96 ATOM 13 CA PHE M 37 107.420 -44.973 292.763 1.00 72.38 ATOM 14 CA ALA M 38 106.394 -46.817 295.924 1.00 70.31 ATOM 15 CA ILE M 39 108.228 -49.110 298.319 1.00 83.03 ATOM 16 CA GLU M 40 107.119 -52.107 300.333 1.00 67.54 ATOM 17 CA SER M 41 108.930 -54.678 302.455 1.00 60.36 ATOM 18 CA ILE M 42 107.496 -58.130 301.819 1.00 43.75 ATOM 19 CA GLN M 43 108.383 -61.297 303.713 1.00 46.19 ATOM 20 CA GLN M 44 110.094 -64.129 301.876 1.00 61.04 ATOM 21 CA THR M 45 109.368 -67.844 302.011 1.00 64.65 ATOM 22 CA ILE M 46 112.289 -69.540 303.706 1.00 57.62 ATOM 23 CA ASN M 47 113.046 -72.977 302.236 1.00 68.07 ATOM 24 CA GLY M 48 114.382 -75.756 304.446 1.00 60.93 ATOM 25 CA SER M 49 114.517 -76.266 308.187 1.00 51.00 ATOM 26 CA VAL M 50 115.858 -73.319 310.190 1.00 44.00 ATOM 27 CA GLY M 51 118.382 -74.286 312.841 1.00 59.75 ATOM 28 CA PHE M 52 122.029 -74.139 313.899 1.00 94.58 ATOM 29 CA GLY M 53 124.174 -75.779 311.236 1.00 64.49 ATOM 30 CA ASN M 54 121.440 -75.905 308.636 1.00 36.14 ATOM 31 CA LYS M 55 121.526 -74.614 305.074 1.00 23.68 ATOM 32 CA VAL M 56 118.420 -72.738 303.988 1.00 33.64 ATOM 33 CA SER M 57 117.466 -70.856 300.828 1.00 53.49 ATOM 34 CA THR M 58 114.911 -68.491 299.317 1.00 77.24 ATOM 35 CA GLN M 59 113.748 -67.654 295.806 1.00 82.96 ATOM 36 CA ILE M 60 112.771 -63.982 295.777 1.00 90.08 ATOM 37 CA SER M 61 109.090 -63.718 294.877 1.00 83.74 ATOM 38 CA ARG M 62 108.069 -61.423 292.035 1.00 72.26 ATOM 39 CA ASN M 63 105.874 -59.002 293.957 1.00 72.08 ATOM 40 CA GLY M 64 107.559 -55.768 293.000 1.00 56.98 ATOM 41 CA ASP M 65 109.370 -54.429 289.972 1.00 66.06 ATOM 42 CA LEU M 66 112.747 -53.820 291.621 1.00 68.15 ATOM 43 CA ILE M 67 114.372 -54.988 294.838 1.00 69.31 ATOM 44 CA THR M 68 116.773 -53.119 297.078 1.00 72.60 ATOM 45 CA ASP M 69 117.156 -53.798 300.803 1.00 86.29 ATOM 46 CA ILE M 70 116.993 -57.308 302.264 1.00 91.12 ATOM 47 CA VAL M 71 116.909 -57.889 306.023 1.00 75.12 ATOM 48 CA VAL M 72 117.250 -61.204 307.795 1.00 52.68 ATOM 49 CA GLU M 73 115.391 -61.326 311.117 1.00 48.88 ATOM 50 CA PHE M 74 116.479 -63.608 313.938 1.00 49.67 ATOM 51 CA VAL M 75 115.084 -64.196 317.412 1.00 61.97 ATOM 52 CA LEU M 76 117.594 -65.576 319.899 1.00 52.12 ATOM 53 CA THR M 77 117.813 -66.057 323.671 1.00 49.31 ATOM 54 CA LYS M 78 120.943 -65.344 325.764 1.00 73.04 ATOM 55 CA GLY M 79 122.585 -68.260 327.541 1.00 82.94 ATOM 56 CA GLY M 80 124.839 -66.092 329.674 1.00 88.24 ATOM 57 CA ASN M 81 124.946 -62.758 331.470 1.00 74.32 ATOM 58 CA GLY M 82 126.602 -59.448 330.574 1.00 64.31 ATOM 59 CA GLY M 83 129.433 -59.232 328.065 1.00 56.51 ATOM 60 CA THR M 84 128.924 -62.856 327.075 1.00 55.62 ATOM 61 CA THR M 85 127.793 -62.099 323.536 1.00 59.51 ATOM 62 CA TYR M 86 129.486 -60.527 320.499 1.00 54.95 ATOM 63 CA TYR M 87 127.471 -59.871 317.343 1.00 62.38 ATOM 64 CA PRO M 88 125.535 -63.193 317.598 1.00 70.33 ATOM 65 CA ALA M 89 123.085 -62.383 314.787 1.00 73.76 ATOM 66 CA GLU M 90 125.988 -61.442 312.548 1.00 80.77 ATOM 67 CA GLU M 91 127.856 -64.675 313.328 1.00 73.20 ATOM 68 CA LEU M 92 124.715 -66.806 312.852 1.00 88.53 ATOM 69 CA LEU M 93 124.733 -65.760 309.182 1.00 88.23 ATOM 70 CA GLN M 94 127.881 -67.737 308.355 1.00 64.64 ATOM 71 CA ASP M 95 127.466 -66.923 304.643 1.00 72.95 ATOM 72 CA VAL M 96 124.977 -65.662 302.059 1.00 82.37 ATOM 73 CA GLU M 97 125.087 -66.407 298.333 1.00 65.95 ATOM 74 CA LEU M 98 123.245 -64.398 295.679 1.00 76.10 ATOM 75 CA GLU M 99 122.341 -66.418 292.597 1.00 64.08 ATOM 76 CA ILE M 100 120.590 -65.232 289.417 1.00 69.74 ATOM 77 CA GLY M 101 119.436 -67.685 286.749 1.00 65.34 ATOM 78 CA GLY M 102 121.460 -70.411 288.423 1.00 62.20 ATOM 79 CA GLN M 103 124.597 -68.264 288.166 1.00 68.97 ATOM 80 CA ARG M 104 126.303 -66.989 291.291 1.00 67.64 ATOM 81 CA ILE M 105 126.688 -63.191 291.425 1.00 67.19 ATOM 82 CA ASP M 106 128.272 -62.770 294.858 1.00 66.71 ATOM 83 CA LYS M 107 128.717 -64.467 298.234 1.00 81.97 ATOM 84 CA HIS M 108 129.415 -62.995 301.675 1.00 96.36 ATOM 85 CA TYR M 109 130.721 -64.485 304.903 1.00 84.26 ATOM 86 CA ASN M 110 130.681 -64.055 308.659 1.00 65.80 ATOM 87 CA ASP M 111 134.101 -62.514 308.873 1.00 53.56 ATOM 88 CA TRP M 112 133.342 -60.205 305.930 1.00 81.56 ATOM 89 CA PHE M 113 130.399 -58.585 307.696 1.00 87.07 ATOM 90 CA ARG M 114 132.676 -58.186 310.733 1.00 63.72 ATOM 91 CA THR M 115 135.495 -56.730 308.611 1.00 59.76 ATOM 92 CA TYR M 116 133.060 -54.516 306.724 1.00 78.47 ATOM 93 CA ASP M 117 131.664 -53.129 309.963 1.00 79.16 ATOM 94 CA ALA M 118 135.151 -52.492 311.356 1.00 58.23 ATOM 95 CA LEU M 119 136.202 -50.673 308.205 1.00 27.93 ATOM 96 CA PHE M 120 133.152 -49.071 306.543 1.00 53.75 ATOM 97 CA ARG M 121 130.535 -48.467 309.220 1.00 64.23 ATOM 98 CA MET M 122 131.026 -45.680 311.762 1.00 64.56 ATOM 99 CA ASN M 123 129.670 -43.518 314.530 1.00 77.08 ATOM 100 CA ASP M 124 125.981 -43.902 315.543 1.00 76.19 ATOM 101 CA ASP M 125 125.268 -45.959 312.432 1.00 64.34 ATOM 102 CA ARG M 126 127.806 -48.524 313.598 1.00 69.82 ATOM 103 CA TYR M 127 126.297 -48.496 317.077 1.00 76.69 ATOM 104 CA ASN M 128 122.793 -48.910 315.654 1.00 51.90 ATOM 105 CA TYR M 129 124.132 -51.886 313.684 1.00 52.99 ATOM 106 CA ARG M 130 125.284 -53.541 316.905 1.00 66.34 ATOM 107 CA ARG M 131 121.864 -52.953 318.467 1.00 54.77 ATOM 108 CA MET M 132 120.440 -54.815 315.464 1.00 52.50 ATOM 109 CA THR M 133 123.088 -57.517 315.752 1.00 63.14 ATOM 110 CA ASP M 134 123.217 -58.249 319.499 1.00 69.27 ATOM 111 CA TRP M 135 122.465 -57.496 323.116 1.00 68.51 ATOM 112 CA VAL M 136 123.828 -54.090 324.088 1.00 68.17 ATOM 113 CA ASN M 137 122.080 -53.420 327.421 1.00 70.17 ATOM 114 CA ASN M 138 123.770 -55.909 329.767 1.00 64.71 ATOM 115 CA GLU M 139 121.054 -58.517 329.388 1.00 56.65 ATOM 116 CA LEU M 140 121.174 -61.662 331.518 1.00 63.29 ATOM 117 CA VAL M 141 120.476 -65.334 330.860 1.00 70.99 ATOM 118 CA GLY M 142 117.106 -65.971 329.246 1.00 45.57 ATOM 119 CA ALA M 143 116.808 -62.559 327.576 1.00 56.32 ATOM 120 CA GLN M 144 115.131 -62.921 324.143 1.00 75.72 ATOM 121 CA LYS M 145 115.761 -60.353 321.402 1.00 76.78 ATOM 122 CA ARG M 146 114.779 -59.565 317.798 1.00 73.64 ATOM 123 CA PHE M 147 117.802 -59.236 315.510 1.00 58.12 ATOM 124 CA TYR M 148 118.008 -57.640 312.075 1.00 55.04 ATOM 125 CA VAL M 149 120.982 -58.409 309.861 1.00 58.30 ATOM 126 CA PRO M 150 121.076 -56.164 306.750 1.00 63.43 ATOM 127 CA LEU M 151 122.684 -57.692 303.645 1.00 55.05 ATOM 128 CA ILE M 152 125.318 -55.725 301.729 1.00 43.29 ATOM 129 CA PHE M 153 125.112 -56.888 298.093 1.00 53.77 ATOM 130 CA PHE M 154 125.399 -54.321 295.283 1.00 69.47 ATOM 131 CA PHE M 155 121.651 -53.763 295.033 1.00 74.83 ATOM 132 CA ASN M 156 121.347 -53.541 298.848 1.00 66.44 ATOM 133 CA GLN M 157 123.782 -50.617 299.062 1.00 79.64 ATOM 134 CA THR M 158 122.283 -48.226 296.487 1.00103.00 ATOM 135 CA PRO M 159 118.806 -47.729 295.088 1.00 87.38 ATOM 136 CA GLY M 160 120.658 -46.788 291.891 1.00 94.96 ATOM 137 CA LEU M 161 121.683 -50.416 291.469 1.00 77.12 ATOM 138 CA ALA M 162 118.229 -51.783 292.294 1.00 65.54 ATOM 139 CA LEU M 163 117.954 -55.288 290.793 1.00 77.44 ATOM 140 CA PRO M 164 115.166 -55.157 288.130 1.00 78.64 ATOM 141 CA LEU M 165 112.973 -58.227 288.651 1.00 76.99 ATOM 142 CA ILE M 166 110.702 -57.214 285.779 1.00 73.74 ATOM 143 CA ALA M 167 113.745 -57.430 283.522 1.00 62.21 ATOM 144 CA LEU M 168 114.624 -60.923 284.767 1.00 55.25 ATOM 145 CA GLN M 169 111.381 -62.614 283.760 1.00 67.29 ATOM 146 CA TYR M 170 113.277 -65.845 283.014 1.00 61.67 ATOM 147 CA HIS M 171 116.007 -65.730 285.650 1.00 60.47 ATOM 148 CA GLU M 172 115.250 -66.800 289.218 1.00 67.48 ATOM 149 CA VAL M 173 116.885 -64.774 291.971 1.00 77.76 ATOM 150 CA LYS M 174 117.869 -66.901 294.958 1.00 80.07 ATOM 151 CA LEU M 175 119.693 -66.569 298.266 1.00 86.35 ATOM 152 CA TYR M 176 121.524 -69.377 300.048 1.00 51.60 ATOM 153 CA PHE M 177 122.189 -69.056 303.786 1.00 49.52 ATOM 154 CA THR M 178 124.317 -71.284 305.991 1.00 36.57 ATOM 155 CA LEU M 179 123.680 -70.810 309.700 1.00 77.33 ATOM 156 CA ALA M 180 126.566 -71.101 312.150 1.00 71.24 ATOM 157 CA SER M 181 126.437 -74.219 314.299 1.00 75.61 ATOM 158 CA GLN M 182 127.920 -72.693 317.462 1.00 63.87 ATOM 159 CA VAL M 183 127.277 -69.105 318.503 1.00 69.83 ATOM 160 CA GLN M 184 128.941 -67.904 321.713 1.00 43.36 ATOM 161 CA GLY M 185 126.615 -66.742 324.471 1.00 68.53 ATOM 162 CA VAL M 186 123.609 -68.270 322.737 1.00 89.02 ATOM 163 CA ASN M 187 124.329 -71.813 321.572 1.00 79.49 ATOM 164 CA TYR M 188 127.520 -72.582 323.493 1.00 60.21 ATOM 165 CA ASN M 189 129.794 -71.018 326.104 1.00 53.94 ATOM 166 CA GLY M 190 133.249 -71.700 324.763 1.00 39.91 ATOM 167 CA SER M 191 133.393 -75.332 323.669 1.00 58.07 ATOM 168 CA SER M 192 130.613 -76.303 326.112 1.00 64.89 ATOM 169 CA ALA M 193 127.072 -76.476 324.782 1.00 57.73 ATOM 170 CA ILE M 194 124.437 -74.561 326.768 1.00 43.51 ATOM 171 CA ALA M 195 121.612 -76.878 327.801 1.00 38.05 ATOM 172 CA GLY M 196 118.065 -75.874 326.890 1.00 48.28 ATOM 173 CA ALA M 197 119.502 -73.515 324.266 1.00 36.62 ATOM 174 CA ALA M 198 116.624 -72.626 321.960 1.00 36.05 ATOM 175 CA GLN M 199 116.974 -72.944 318.197 1.00 41.22 ATOM 176 CA PRO M 200 116.974 -69.766 316.098 1.00 42.68 ATOM 177 CA THR M 201 113.852 -68.334 314.443 1.00 47.94 ATOM 178 CA MET M 202 114.511 -66.825 311.027 1.00 56.76 ATOM 179 CA SER M 203 112.639 -64.472 308.701 1.00 55.52 ATOM 180 CA VAL M 204 113.691 -62.930 305.363 1.00 59.96 ATOM 181 CA TRP M 205 112.343 -59.560 304.221 1.00 60.75 ATOM 182 CA VAL M 206 112.825 -57.863 300.849 1.00 82.99 ATOM 183 CA ASP M 207 112.090 -54.251 299.876 1.00 80.15 ATOM 184 CA TYR M 208 110.308 -53.848 296.532 1.00 66.88 ATOM 185 CA ILE M 209 110.015 -50.772 294.375 1.00 74.72 ATOM 186 CA PHE M 210 106.803 -50.426 292.388 1.00 69.85 ATOM 187 CA LEU M 211 107.387 -48.284 289.324 1.00 77.03 ATOM 188 CA ASP M 212 105.071 -46.217 287.185 1.00 73.77 ATOM 189 CA THR M 213 103.891 -47.376 283.733 1.00 69.51 ATOM 190 CA GLN M 214 106.345 -45.160 281.884 1.00 86.41 ATOM 191 CA GLU M 215 109.503 -46.496 283.518 1.00 81.79 ATOM 192 CA ARG M 216 108.097 -50.031 283.850 1.00 70.32 ATOM 193 CA THR M 217 107.884 -50.336 280.082 1.00 77.39 ATOM 194 CA ARG M 218 111.465 -49.197 279.723 1.00 76.74 ATOM 195 CA PHE M 219 112.800 -51.561 282.388 1.00 61.53 ATOM 196 CA ALA M 220 111.026 -54.367 280.571 1.00 74.51 ATOM 197 CA GLN M 221 111.898 -53.293 277.046 1.00 83.16 TER