HEADER IMMUNE SYSTEM 31-DEC-69 3NSJ TITLE The X-ray crystal structure of lymphocyte perforin COMPND MOL_ID: 1; COMPND 2 MOLECULE: Perforin-1; COMPND 3 CHAIN: A; COMPND 4 MUTATION: YES; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.75 ANGSTORMS DBREF 3NSJ A 21 554 UNP P10820 PERF_MOUSE 21 554 MODRES 3NSJ ASN A 184 ASN GLYCOSYLATION SITE SEQRES 1 A 37 GLN ASN CYS SER ARG PRO CYS ARG SER GLY GLN HIS LYS SEQRES 2 A 37 SER SER HIS ASP SER CYS GLN CYS GLU CYS GLN ASP SER SEQRES 3 A 37 LYS VAL THR ASN GLN ASP CYS CYS PRO ARG GLN ATOM 1 N GLN A 374 24.464 21.070 89.796 1.00 99.95 ATOM 2 CA GLN A 374 24.878 20.010 90.703 1.00102.12 ATOM 3 C GLN A 374 26.284 20.309 91.221 1.00112.40 ATOM 4 O GLN A 374 27.237 20.345 90.435 1.00112.77 ATOM 5 CB GLN A 374 24.825 18.644 89.992 1.00103.31 ATOM 6 CG GLN A 374 25.120 17.452 90.898 1.00121.30 ATOM 7 CD GLN A 374 25.118 16.157 90.133 1.00142.99 ATOM 8 OE1 GLN A 374 24.091 15.478 90.023 1.00139.81 ATOM 9 NE2 GLN A 374 26.270 15.783 89.592 1.00133.87 ATOM 10 N ASN A 375 26.404 20.543 92.540 1.00113.22 ATOM 11 CA ASN A 375 27.691 20.779 93.192 1.00115.74 ATOM 12 C ASN A 375 28.166 19.435 93.742 1.00123.87 ATOM 13 O ASN A 375 27.593 18.920 94.706 1.00123.16 ATOM 14 CB ASN A 375 27.580 21.835 94.297 1.00116.95 ATOM 15 N CYS A 376 29.173 18.839 93.082 1.00124.01 ATOM 16 CA CYS A 376 29.728 17.537 93.461 1.00125.48 ATOM 17 C CYS A 376 30.573 17.597 94.744 1.00130.06 ATOM 18 O CYS A 376 30.953 16.555 95.287 1.00129.48 ATOM 19 CB CYS A 376 30.483 16.907 92.293 1.00127.26 ATOM 20 SG CYS A 376 29.476 16.698 90.797 1.00131.40 ATOM 21 N SER A 377 30.818 18.827 95.243 1.00127.22 ATOM 22 CA SER A 377 31.528 19.127 96.486 1.00127.44 ATOM 23 C SER A 377 30.601 18.877 97.687 1.00130.09 ATOM 24 O SER A 377 31.084 18.571 98.780 1.00130.00 ATOM 25 CB SER A 377 32.011 20.576 96.485 1.00131.84 ATOM 26 OG SER A 377 30.947 21.486 96.252 1.00140.14 ATOM 27 N ARG A 378 29.271 19.007 97.474 1.00125.25 ATOM 28 CA ARG A 378 28.226 18.795 98.483 1.00124.23 ATOM 29 C ARG A 378 28.130 17.308 98.888 1.00126.56 ATOM 30 O ARG A 378 28.355 16.443 98.036 1.00125.81 ATOM 31 CB ARG A 378 26.863 19.300 97.969 1.00124.25 ATOM 32 CG ARG A 378 26.753 20.819 97.882 1.00135.59 ATOM 33 CD ARG A 378 25.396 21.253 97.364 1.00145.56 ATOM 34 N PRO A 379 27.804 16.980 100.166 1.00122.26 ATOM 35 CA PRO A 379 27.729 15.559 100.558 1.00121.54 ATOM 36 C PRO A 379 26.509 14.824 100.006 1.00124.58 ATOM 37 O PRO A 379 25.493 15.457 99.703 1.00124.03 ATOM 38 CB PRO A 379 27.707 15.615 102.087 1.00123.34 ATOM 39 CG PRO A 379 27.093 16.927 102.402 1.00127.90 ATOM 40 CD PRO A 379 27.521 17.869 101.314 1.00123.87 ATOM 41 N CYS A 380 26.603 13.480 99.903 1.00120.56 ATOM 42 CA CYS A 380 25.519 12.618 99.419 1.00119.78 ATOM 43 C CYS A 380 24.344 12.607 100.407 1.00122.09 ATOM 44 O CYS A 380 24.473 13.103 101.531 1.00121.89 ATOM 45 CB CYS A 380 26.026 11.202 99.149 1.00120.38 ATOM 46 SG CYS A 380 27.189 11.068 97.765 1.00125.02 ATOM 47 N ARG A 381 23.199 12.034 99.982 1.00117.18 ATOM 48 CA ARG A 381 21.997 11.885 100.805 1.00116.18 ATOM 49 C ARG A 381 22.340 11.000 102.011 1.00120.15 ATOM 50 O ARG A 381 23.075 10.023 101.851 1.00119.52 ATOM 51 CB ARG A 381 20.870 11.243 99.974 1.00114.06 ATOM 52 CG ARG A 381 19.528 11.170 100.693 1.00117.75 ATOM 53 CD ARG A 381 18.400 10.647 99.816 1.00119.30 ATOM 54 NE ARG A 381 18.088 11.540 98.697 1.00121.15 ATOM 55 CZ ARG A 381 17.374 12.659 98.793 1.00130.42 ATOM 56 NH1 ARG A 381 16.897 13.054 99.967 1.00114.90 ATOM 57 NH2 ARG A 381 17.147 13.401 97.718 1.00115.96 ATOM 58 N SER A 382 21.835 11.358 103.209 1.00117.03 ATOM 59 CA SER A 382 22.064 10.620 104.455 1.00117.08 ATOM 60 C SER A 382 21.871 9.106 104.265 1.00121.13 ATOM 61 O SER A 382 20.787 8.656 103.887 1.00120.43 ATOM 62 CB SER A 382 21.176 11.158 105.574 1.00120.80 ATOM 63 OG SER A 382 19.803 11.104 105.222 1.00128.89 ATOM 64 N GLY A 383 22.959 8.362 104.445 1.00118.36 ATOM 65 CA GLY A 383 23.001 6.915 104.263 1.00118.45 ATOM 66 C GLY A 383 23.727 6.484 103.002 1.00123.70 ATOM 67 O GLY A 383 23.628 5.324 102.593 1.00123.01 ATOM 68 N GLN A 384 24.461 7.425 102.376 1.00121.68 ATOM 69 CA GLN A 384 25.244 7.223 101.153 1.00122.11 ATOM 70 C GLN A 384 26.630 7.866 101.286 1.00128.18 ATOM 71 O GLN A 384 26.855 8.673 102.192 1.00127.75 ATOM 72 CB GLN A 384 24.508 7.806 99.935 1.00123.15 ATOM 73 CG GLN A 384 23.404 6.914 99.382 1.00132.64 ATOM 74 CD GLN A 384 22.432 7.640 98.476 1.00146.49 ATOM 75 OE1 GLN A 384 21.232 7.352 98.471 1.00140.77 ATOM 76 NE2 GLN A 384 22.912 8.585 97.675 1.00137.27 ATOM 77 N HIS A 385 27.552 7.510 100.373 1.00126.63 ATOM 78 CA HIS A 385 28.925 8.025 100.348 1.00127.65 ATOM 79 C HIS A 385 29.487 8.097 98.932 1.00133.27 ATOM 80 O HIS A 385 29.197 7.225 98.107 1.00132.78 ATOM 81 CB HIS A 385 29.852 7.195 101.258 1.00128.62 ATOM 82 CG HIS A 385 29.488 5.746 101.339 1.00131.73 ATOM 83 ND1 HIS A 385 29.828 4.859 100.333 1.00133.72 ATOM 84 CD2 HIS A 385 28.807 5.079 102.300 1.00133.08 ATOM 85 CE1 HIS A 385 29.354 3.685 100.716 1.00132.88 ATOM 86 NE2 HIS A 385 28.733 3.768 101.894 1.00132.82 ATOM 87 N LYS A 386 30.298 9.141 98.659 1.00131.29 ATOM 88 CA LYS A 386 30.940 9.378 97.364 1.00132.03 ATOM 89 C LYS A 386 31.994 8.314 97.058 1.00137.65 ATOM 90 O LYS A 386 32.867 8.052 97.892 1.00137.54 ATOM 91 CB LYS A 386 31.567 10.782 97.318 1.00134.93 ATOM 92 CG LYS A 386 30.591 11.882 96.915 1.00147.93 ATOM 93 CD LYS A 386 31.070 13.272 97.327 1.00157.64 ATOM 94 CE LYS A 386 30.608 13.665 98.711 1.00167.31 ATOM 95 NZ LYS A 386 31.229 14.940 99.155 1.00176.53 ATOM 96 N SER A 387 31.897 7.692 95.867 1.00135.29 ATOM 97 CA SER A 387 32.834 6.664 95.407 1.00136.06 ATOM 98 C SER A 387 34.184 7.291 95.036 1.00141.66 ATOM 99 O SER A 387 34.235 8.472 94.677 1.00141.55 ATOM 100 CB SER A 387 32.254 5.903 94.219 1.00139.47 ATOM 101 N SER A 388 35.274 6.500 95.130 1.00139.21 ATOM 102 CA SER A 388 36.645 6.928 94.817 1.00140.15 ATOM 103 C SER A 388 36.833 7.319 93.342 1.00144.57 ATOM 104 O SER A 388 37.688 8.152 93.033 1.00145.00 ATOM 105 CB SER A 388 37.641 5.836 95.199 1.00144.28 ATOM 106 OG SER A 388 37.386 4.631 94.496 1.00153.01 ATOM 107 N HIS A 389 36.024 6.720 92.446 1.00140.59 ATOM 108 CA HIS A 389 36.051 6.932 90.997 1.00140.72 ATOM 109 C HIS A 389 35.574 8.333 90.587 1.00143.07 ATOM 110 O HIS A 389 36.307 9.037 89.888 1.00143.47 ATOM 111 CB HIS A 389 35.250 5.832 90.271 1.00141.34 ATOM 112 CG HIS A 389 35.586 4.442 90.725 1.00144.93 ATOM 113 ND1 HIS A 389 36.628 3.729 90.160 1.00147.74 ATOM 114 CD2 HIS A 389 35.015 3.687 91.693 1.00145.93 ATOM 115 CE1 HIS A 389 36.654 2.568 90.793 1.00147.00 ATOM 116 NE2 HIS A 389 35.703 2.497 91.725 1.00146.27 ATOM 117 N ASP A 390 34.361 8.738 91.026 1.00137.49 ATOM 118 CA ASP A 390 33.778 10.045 90.704 1.00136.42 ATOM 119 C ASP A 390 33.175 10.749 91.923 1.00138.00 ATOM 120 O ASP A 390 32.476 10.118 92.721 1.00136.81 ATOM 121 CB ASP A 390 32.729 9.913 89.587 1.00137.83 ATOM 122 N SER A 391 33.432 12.069 92.042 1.00133.53 ATOM 123 CA SER A 391 32.922 12.924 93.120 1.00132.23 ATOM 124 C SER A 391 31.414 13.183 92.966 1.00133.81 ATOM 125 O SER A 391 30.755 13.574 93.933 1.00132.86 ATOM 126 CB SER A 391 33.683 14.245 93.157 1.00136.32 ATOM 127 N CYS A 392 30.880 12.957 91.746 1.00129.05 ATOM 128 CA CYS A 392 29.469 13.129 91.381 1.00127.42 ATOM 129 C CYS A 392 28.691 11.799 91.467 1.00129.88 ATOM 130 O CYS A 392 27.499 11.765 91.153 1.00128.87 ATOM 131 CB CYS A 392 29.347 13.763 89.996 1.00127.65 ATOM 132 SG CYS A 392 30.398 15.220 89.746 1.00132.12 ATOM 133 N GLN A 393 29.367 10.715 91.900 1.00125.98 ATOM 134 CA GLN A 393 28.770 9.387 92.036 1.00125.01 ATOM 135 C GLN A 393 28.595 8.994 93.506 1.00127.24 ATOM 136 O GLN A 393 29.585 8.878 94.237 1.00126.91 ATOM 137 CB GLN A 393 29.598 8.336 91.274 1.00127.00 ATOM 138 N CYS A 394 27.327 8.812 93.936 1.00122.25 ATOM 139 CA CYS A 394 26.965 8.407 95.298 1.00121.04 ATOM 140 C CYS A 394 26.720 6.898 95.337 1.00123.76 ATOM 141 O CYS A 394 26.010 6.364 94.480 1.00123.05 ATOM 142 CB CYS A 394 25.753 9.185 95.805 1.00120.75 ATOM 143 SG CYS A 394 26.054 10.953 96.076 1.00124.80 ATOM 144 N GLU A 395 27.324 6.216 96.325 1.00119.77 ATOM 145 CA GLU A 395 27.222 4.767 96.502 1.00119.20 ATOM 146 C GLU A 395 26.387 4.380 97.726 1.00121.73 ATOM 147 O GLU A 395 26.411 5.085 98.739 1.00121.18 ATOM 148 CB GLU A 395 28.623 4.141 96.593 1.00121.04 ATOM 149 N CYS A 396 25.661 3.247 97.629 1.00117.28 ATOM 150 CA CYS A 396 24.833 2.707 98.713 1.00116.34 ATOM 151 C CYS A 396 25.732 2.069 99.772 1.00121.55 ATOM 152 O CYS A 396 26.805 1.559 99.432 1.00121.70 ATOM 153 CB CYS A 396 23.815 1.701 98.176 1.00116.06 ATOM 154 SG CYS A 396 22.775 2.325 96.825 1.00119.41 ATOM 155 N GLN A 397 25.301 2.085 101.046 1.00118.47 ATOM 156 CA GLN A 397 26.094 1.493 102.128 1.00118.72 ATOM 157 C GLN A 397 26.084 -0.048 102.164 1.00123.69 ATOM 158 O GLN A 397 27.113 -0.647 102.487 1.00123.68 ATOM 159 CB GLN A 397 25.811 2.138 103.503 1.00119.72 ATOM 160 CG GLN A 397 24.430 1.873 104.095 1.00132.10 ATOM 161 CD GLN A 397 24.382 2.272 105.546 1.00149.24 ATOM 162 N ASP A 398 24.940 -0.681 101.816 1.00120.42 ATOM 163 CA ASP A 398 24.787 -2.141 101.802 1.00120.47 ATOM 164 C ASP A 398 24.181 -2.624 100.478 1.00124.67 ATOM 165 O ASP A 398 22.976 -2.863 100.398 1.00124.29 ATOM 166 CB ASP A 398 23.966 -2.615 103.016 1.00122.02 ATOM 167 N SER A 399 25.033 -2.772 99.445 1.00121.65 ATOM 168 CA SER A 399 24.669 -3.184 98.082 1.00121.90 ATOM 169 C SER A 399 23.940 -4.536 97.936 1.00126.25 ATOM 170 O SER A 399 23.190 -4.710 96.971 1.00126.06 ATOM 171 CB SER A 399 25.889 -3.136 97.166 1.00125.68 ATOM 172 N LYS A 400 24.156 -5.482 98.875 1.00122.98 ATOM 173 CA LYS A 400 23.545 -6.819 98.839 1.00123.23 ATOM 174 C LYS A 400 22.045 -6.835 99.171 1.00126.79 ATOM 175 O LYS A 400 21.247 -7.316 98.363 1.00126.71 ATOM 176 CB LYS A 400 24.327 -7.817 99.715 1.00125.89 ATOM 177 CG LYS A 400 25.639 -8.284 99.095 1.00140.63 ATOM 178 N VAL A 401 21.666 -6.317 100.356 1.00122.75 ATOM 179 CA VAL A 401 20.274 -6.270 100.833 1.00122.30 ATOM 180 C VAL A 401 19.439 -5.163 100.182 1.00125.66 ATOM 181 O VAL A 401 18.257 -5.378 99.907 1.00125.32 ATOM 182 CB VAL A 401 20.151 -6.249 102.380 1.00125.72 ATOM 183 CG1 VAL A 401 20.420 -7.625 102.975 1.00125.84 ATOM 184 CG2 VAL A 401 21.059 -5.192 103.002 1.00124.99 ATOM 185 N THR A 402 20.043 -3.978 99.963 1.00121.67 ATOM 186 CA THR A 402 19.358 -2.840 99.351 1.00121.09 ATOM 187 C THR A 402 19.367 -2.930 97.829 1.00125.01 ATOM 188 O THR A 402 20.385 -3.288 97.228 1.00124.86 ATOM 189 CB THR A 402 19.901 -1.481 99.849 1.00127.88 ATOM 190 OG1 THR A 402 21.225 -1.260 99.359 1.00127.45 ATOM 191 CG2 THR A 402 19.851 -1.331 101.367 1.00125.83 ATOM 192 N ASN A 403 18.234 -2.573 97.210 1.00121.21 ATOM 193 CA ASN A 403 18.072 -2.544 95.758 1.00121.08 ATOM 194 C ASN A 403 18.666 -1.228 95.220 1.00123.62 ATOM 195 O ASN A 403 19.452 -0.576 95.919 1.00122.63 ATOM 196 CB ASN A 403 16.583 -2.663 95.403 1.00122.17 ATOM 197 N GLN A 404 18.294 -0.832 93.985 1.00119.77 ATOM 198 CA GLN A 404 18.746 0.430 93.399 1.00119.00 ATOM 199 C GLN A 404 18.085 1.578 94.181 1.00121.01 ATOM 200 O GLN A 404 17.072 1.354 94.858 1.00120.32 ATOM 201 CB GLN A 404 18.400 0.496 91.903 1.00120.77 ATOM 202 CG GLN A 404 19.405 1.299 91.088 1.00137.12 ATOM 203 N ASP A 405 18.688 2.787 94.128 1.00116.27 ATOM 204 CA ASP A 405 18.258 3.997 94.855 1.00115.19 ATOM 205 C ASP A 405 18.487 3.853 96.380 1.00117.71 ATOM 206 O ASP A 405 18.011 4.685 97.158 1.00117.31 ATOM 207 CB ASP A 405 16.798 4.418 94.526 1.00116.86 ATOM 208 CG ASP A 405 16.368 4.258 93.077 1.00126.42 ATOM 209 OD1 ASP A 405 17.079 4.772 92.186 1.00127.27 ATOM 210 OD2 ASP A 405 15.309 3.637 92.839 1.00131.32 ATOM 211 N CYS A 406 19.249 2.803 96.788 1.00113.02 ATOM 212 CA CYS A 406 19.629 2.449 98.165 1.00111.98 ATOM 213 C CYS A 406 18.434 2.232 99.113 1.00108.85 ATOM 214 O CYS A 406 18.482 2.634 100.280 1.00108.48 ATOM 215 CB CYS A 406 20.648 3.435 98.740 1.00113.51 ATOM 216 SG CYS A 406 21.894 4.010 97.554 1.00118.56 ATOM 217 N CYS A 407 17.370 1.582 98.611 1.00 99.98 ATOM 218 CA CYS A 407 16.168 1.300 99.397 1.00 97.28 ATOM 219 C CYS A 407 16.249 -0.110 99.979 1.00100.06 ATOM 220 O CYS A 407 16.537 -1.039 99.219 1.00 99.95 ATOM 221 CB CYS A 407 14.902 1.476 98.560 1.00 96.39 ATOM 222 SG CYS A 407 14.735 3.095 97.762 1.00 99.04 ATOM 223 N PRO A 408 15.968 -0.311 101.295 1.00 95.49 ATOM 224 CA PRO A 408 16.001 -1.679 101.852 1.00 95.03 ATOM 225 C PRO A 408 14.874 -2.538 101.280 1.00 97.78 ATOM 226 O PRO A 408 13.741 -2.063 101.173 1.00 97.37 ATOM 227 CB PRO A 408 15.836 -1.465 103.366 1.00 96.69 ATOM 228 CG PRO A 408 15.998 -0.004 103.595 1.00100.90 ATOM 229 CD PRO A 408 15.592 0.672 102.329 1.00 96.64 ATOM 230 N ARG A 409 15.196 -3.784 100.882 1.00 93.71 ATOM 231 CA ARG A 409 14.250 -4.732 100.284 1.00 93.58 ATOM 232 C ARG A 409 13.068 -5.090 101.191 1.00 96.29 ATOM 233 O ARG A 409 11.958 -5.285 100.689 1.00 96.21 ATOM 234 CB ARG A 409 14.969 -5.999 99.800 1.00 94.15 ATOM 235 N GLN A 410 13.302 -5.171 102.517 1.00 91.57 ATOM 236 CA GLN A 410 12.265 -5.507 103.500 1.00 91.12 ATOM 237 C GLN A 410 12.421 -4.757 104.830 1.00 94.13 ATOM 238 O GLN A 410 13.491 -4.219 105.117 1.00 92.97 ATOM 239 CB GLN A 410 12.176 -7.035 103.716 1.00 92.69 ATOM 240 CG GLN A 410 13.437 -7.675 104.295 1.00 98.05 ATOM 241 CD GLN A 410 13.429 -9.173 104.159 1.00106.46 ATOM 242 OE1 GLN A 410 12.643 -9.877 104.802 1.00100.56 ATOM 243 NE2 GLN A 410 14.324 -9.695 103.334 1.00 92.88 ATOM 244 C1 GOL A 654 20.966 16.806 95.548 1.00106.84 ATOM 245 O1 GOL A 654 20.156 15.627 95.595 1.00105.41 ATOM 246 C2 GOL A 654 20.835 17.502 94.183 1.00106.69 ATOM 247 O2 GOL A 654 21.200 16.585 93.133 1.00107.30 ATOM 248 C3 GOL A 654 21.707 18.779 94.174 1.00107.38 ATOM 249 O3 GOL A 654 21.789 19.395 92.877 1.00107.54 ATOM 250 I IOD A 712 16.947 -8.246 101.741 0.50123.64 TER