HEADER CYTOKINE/CYTOKINE RECEPTOR 31-DEC-69 3QD6 TITLE Crystal structure of the CD40 and CD154 (CD40L) complex COMPND MOL_ID: 2; COMPND 2 MOLECULE: Tumor necrosis factor receptor superfamily member 5; COMPND 3 CHAIN: R, S, T, U; COMPND 4 FRAGMENT: extracellular ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.50 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER R 106 REMARK 465 PRO R 107 REMARK 465 GLY R 108 REMARK 465 PHE R 109 REMARK 465 GLY R 110 REMARK 465 VAL R 111 DBREF 3QD6 R 21 190 UNP P25942 TNR5_HUMAN 21 190 SEQRES 1 R 25 LEU HIS ARG SER CYS SER PRO GLY PHE GLY VAL LYS GLN SEQRES 2 R 25 ILE ALA THR GLY VAL SER ASP THR ILE CYS GLU PRO ATOM 1 N LEU R 121 -22.069 80.185 -27.382 1.00100.94 ATOM 2 CA LEU R 121 -20.638 80.156 -27.651 1.00101.02 ATOM 3 C LEU R 121 -19.891 81.090 -26.707 1.00100.88 ATOM 4 O LEU R 121 -20.313 82.224 -26.471 1.00100.26 ATOM 5 CB LEU R 121 -20.363 80.541 -29.115 1.00101.85 ATOM 6 CG LEU R 121 -21.133 79.772 -30.208 1.00102.76 ATOM 7 CD1 LEU R 121 -22.531 80.385 -30.387 1.00102.43 ATOM 8 CD2 LEU R 121 -20.370 79.815 -31.535 1.00102.30 ATOM 9 N HIS R 122 -18.780 80.589 -26.173 1.00101.11 ATOM 10 CA HIS R 122 -17.912 81.318 -25.240 1.00101.26 ATOM 11 C HIS R 122 -17.482 82.720 -25.695 1.00101.63 ATOM 12 O HIS R 122 -16.548 82.852 -26.488 1.00101.52 ATOM 13 CB HIS R 122 -16.645 80.494 -24.975 1.00100.16 ATOM 14 CG HIS R 122 -16.814 79.414 -23.952 1.00 98.53 ATOM 15 ND1 HIS R 122 -15.813 78.516 -23.652 1.00 96.95 ATOM 16 CD2 HIS R 122 -17.855 79.103 -23.145 1.00 97.80 ATOM 17 CE1 HIS R 122 -16.228 77.698 -22.704 1.00 96.69 ATOM 18 NE2 HIS R 122 -17.464 78.032 -22.379 1.00 97.66 ATOM 19 N ARG R 123 -18.131 83.761 -25.177 1.00101.80 ATOM 20 CA ARG R 123 -17.782 85.129 -25.556 1.00102.00 ATOM 21 C ARG R 123 -16.304 85.469 -25.290 1.00101.75 ATOM 22 O ARG R 123 -15.811 85.343 -24.164 1.00101.02 ATOM 23 CB ARG R 123 -18.696 86.120 -24.830 1.00103.21 ATOM 24 CG ARG R 123 -18.800 85.915 -23.328 1.00105.10 ATOM 25 CD ARG R 123 -19.459 87.121 -22.661 1.00107.18 ATOM 26 NE ARG R 123 -19.288 87.108 -21.207 1.00109.56 ATOM 27 CZ ARG R 123 -19.437 88.173 -20.419 1.00110.60 ATOM 28 NH1 ARG R 123 -19.766 89.352 -20.941 1.00111.08 ATOM 29 NH2 ARG R 123 -19.244 88.064 -19.105 1.00110.72 ATOM 30 N SER R 124 -15.611 85.903 -26.345 1.00101.65 ATOM 31 CA SER R 124 -14.188 86.260 -26.281 1.00101.48 ATOM 32 C SER R 124 -13.938 87.759 -26.527 1.00101.57 ATOM 33 O SER R 124 -14.881 88.522 -26.740 1.00101.65 ATOM 34 CB SER R 124 -13.399 85.437 -27.305 1.00100.69 ATOM 35 OG SER R 124 -13.827 85.735 -28.625 1.00100.14 ATOM 36 N CYS R 125 -12.667 88.170 -26.514 1.00101.24 ATOM 37 CA CYS R 125 -12.301 89.579 -26.699 1.00100.38 ATOM 38 C CYS R 125 -10.926 89.776 -27.353 1.00 99.22 ATOM 39 O CYS R 125 -10.626 90.840 -27.907 1.00 97.25 ATOM 40 CB CYS R 125 -12.334 90.268 -25.333 1.00101.35 ATOM 41 SG CYS R 125 -12.108 89.076 -23.965 1.00102.15 ATOM 42 N LYS R 132 -10.060 88.251 -18.562 1.00112.58 ATOM 43 CA LYS R 132 -9.873 87.864 -17.162 1.00112.70 ATOM 44 C LYS R 132 -10.092 86.356 -16.979 1.00112.83 ATOM 45 O LYS R 132 -9.374 85.538 -17.568 1.00112.88 ATOM 46 CB LYS R 132 -10.847 88.640 -16.262 1.00111.94 ATOM 47 CG LYS R 132 -10.467 88.664 -14.787 1.00110.68 ATOM 48 CD LYS R 132 -9.296 89.612 -14.528 1.00110.08 ATOM 49 CE LYS R 132 -9.699 91.075 -14.719 1.00109.83 ATOM 50 NZ LYS R 132 -8.573 92.036 -14.508 1.00109.16 ATOM 51 N GLN R 133 -11.085 86.001 -16.164 1.00112.62 ATOM 52 CA GLN R 133 -11.419 84.605 -15.890 1.00112.07 ATOM 53 C GLN R 133 -12.178 83.970 -17.061 1.00111.57 ATOM 54 O GLN R 133 -13.136 84.554 -17.578 1.00111.26 ATOM 55 CB GLN R 133 -12.276 84.513 -14.625 1.00112.37 ATOM 56 CG GLN R 133 -12.682 83.097 -14.260 1.00112.48 ATOM 57 CD GLN R 133 -14.011 83.050 -13.542 1.00112.74 ATOM 58 OE1 GLN R 133 -15.038 83.459 -14.087 1.00112.81 ATOM 59 NE2 GLN R 133 -14.003 82.551 -12.312 1.00112.85 ATOM 60 N ILE R 134 -11.754 82.771 -17.461 1.00110.81 ATOM 61 CA ILE R 134 -12.385 82.052 -18.571 1.00110.15 ATOM 62 C ILE R 134 -13.785 81.555 -18.193 1.00110.72 ATOM 63 O ILE R 134 -14.370 82.014 -17.208 1.00111.15 ATOM 64 CB ILE R 134 -11.511 80.840 -19.031 1.00108.67 ATOM 65 CG1 ILE R 134 -11.839 79.585 -18.218 1.00107.24 ATOM 66 CG2 ILE R 134 -10.036 81.170 -18.844 1.00107.86 ATOM 67 CD1 ILE R 134 -11.216 78.324 -18.773 1.00105.43 ATOM 68 N ALA R 135 -14.321 80.623 -18.980 1.00110.70 ATOM 69 CA ALA R 135 -15.646 80.063 -18.720 1.00110.22 ATOM 70 C ALA R 135 -15.589 78.538 -18.585 1.00109.62 ATOM 71 O ALA R 135 -14.543 77.925 -18.819 1.00109.59 ATOM 72 CB ALA R 135 -16.607 80.451 -19.841 1.00110.41 ATOM 73 N THR R 136 -16.716 77.936 -18.203 1.00108.54 ATOM 74 CA THR R 136 -16.804 76.487 -18.043 1.00107.19 ATOM 75 C THR R 136 -18.139 75.975 -18.566 1.00106.74 ATOM 76 O THR R 136 -18.932 76.738 -19.114 1.00106.22 ATOM 77 CB THR R 136 -16.704 76.077 -16.577 1.00106.67 ATOM 78 OG1 THR R 136 -17.912 76.447 -15.908 1.00106.75 ATOM 79 CG2 THR R 136 -15.540 76.768 -15.908 1.00106.38 ATOM 80 N GLY R 137 -18.383 74.681 -18.375 1.00106.66 ATOM 81 CA GLY R 137 -19.621 74.065 -18.827 1.00106.70 ATOM 82 C GLY R 137 -20.851 74.907 -18.550 1.00106.44 ATOM 83 O GLY R 137 -21.810 74.918 -19.328 1.00106.17 ATOM 84 N VAL R 138 -20.824 75.614 -17.428 1.00106.15 ATOM 85 CA VAL R 138 -21.932 76.479 -17.049 1.00105.94 ATOM 86 C VAL R 138 -21.403 77.883 -16.802 1.00105.33 ATOM 87 O VAL R 138 -22.160 78.856 -16.780 1.00105.18 ATOM 88 CB VAL R 138 -22.631 75.977 -15.768 1.00106.15 ATOM 89 CG1 VAL R 138 -23.280 74.627 -16.029 1.00106.45 ATOM 90 CG2 VAL R 138 -21.628 75.876 -14.632 1.00105.57 ATOM 91 N SER R 139 -20.093 77.986 -16.621 1.00104.50 ATOM 92 CA SER R 139 -19.486 79.278 -16.373 1.00103.86 ATOM 93 C SER R 139 -19.328 80.070 -17.644 1.00103.83 ATOM 94 O SER R 139 -19.179 79.513 -18.728 1.00103.29 ATOM 95 CB SER R 139 -18.114 79.122 -15.724 1.00102.99 ATOM 96 OG SER R 139 -17.447 80.369 -15.697 1.00102.53 ATOM 97 N ASP R 140 -19.373 81.384 -17.501 1.00104.21 ATOM 98 CA ASP R 140 -19.186 82.261 -18.633 1.00105.02 ATOM 99 C ASP R 140 -17.836 82.935 -18.420 1.00104.60 ATOM 100 O ASP R 140 -17.306 82.931 -17.303 1.00104.71 ATOM 101 CB ASP R 140 -20.298 83.305 -18.697 1.00106.88 ATOM 102 CG ASP R 140 -19.996 84.414 -19.695 1.00108.72 ATOM 103 OD1 ASP R 140 -19.712 84.104 -20.877 1.00109.08 ATOM 104 OD2 ASP R 140 -20.040 85.598 -19.289 1.00109.62 ATOM 105 N THR R 141 -17.277 83.493 -19.489 1.00103.38 ATOM 106 CA THR R 141 -15.991 84.168 -19.414 1.00101.93 ATOM 107 C THR R 141 -16.136 85.632 -18.999 1.00102.19 ATOM 108 O THR R 141 -17.231 86.198 -19.055 1.00101.30 ATOM 109 CB THR R 141 -15.271 84.111 -20.772 1.00100.85 ATOM 110 OG1 THR R 141 -16.189 84.460 -21.815 1.00 99.27 ATOM 111 CG2 THR R 141 -14.725 82.725 -21.028 1.00 99.46 ATOM 112 N ILE R 142 -15.030 86.230 -18.558 1.00102.69 ATOM 113 CA ILE R 142 -15.006 87.641 -18.166 1.00103.23 ATOM 114 C ILE R 142 -13.716 88.280 -18.699 1.00103.42 ATOM 115 O ILE R 142 -12.613 87.854 -18.360 1.00103.33 ATOM 116 CB ILE R 142 -15.102 87.827 -16.616 1.00102.79 ATOM 117 CG1 ILE R 142 -15.184 89.325 -16.280 1.00101.96 ATOM 118 CG2 ILE R 142 -13.929 87.142 -15.915 1.00101.86 ATOM 119 CD1 ILE R 142 -16.476 90.003 -16.747 1.00100.46 ATOM 120 N CYS R 143 -13.866 89.294 -19.548 1.00103.43 ATOM 121 CA CYS R 143 -12.723 89.974 -20.158 1.00103.18 ATOM 122 C CYS R 143 -12.105 91.064 -19.278 1.00102.76 ATOM 123 O CYS R 143 -12.485 91.237 -18.116 1.00102.91 ATOM 124 CB CYS R 143 -13.139 90.575 -21.514 1.00103.19 ATOM 125 SG CYS R 143 -13.712 89.357 -22.749 1.00102.46 ATOM 126 N GLU R 144 -11.149 91.791 -19.852 1.00101.73 ATOM 127 CA GLU R 144 -10.454 92.869 -19.161 1.00100.73 ATOM 128 C GLU R 144 -9.243 93.303 -19.990 1.00100.16 ATOM 129 O GLU R 144 -8.743 92.535 -20.814 1.00100.92 ATOM 130 CB GLU R 144 -9.981 92.387 -17.792 1.00100.94 ATOM 131 CG GLU R 144 -9.009 91.219 -17.867 1.00101.14 ATOM 132 CD GLU R 144 -7.588 91.607 -17.496 1.00101.25 ATOM 133 OE1 GLU R 144 -6.683 90.764 -17.682 1.00100.82 ATOM 134 OE2 GLU R 144 -7.377 92.745 -17.016 1.00100.87 ATOM 135 N PRO R 145 -8.767 94.548 -19.790 1.00 98.93 ATOM 136 CA PRO R 145 -7.612 95.137 -20.485 1.00 97.16 ATOM 137 C PRO R 145 -6.294 94.363 -20.326 1.00 95.62 ATOM 138 O PRO R 145 -5.628 94.110 -21.352 1.00 94.33 ATOM 139 CB PRO R 145 -7.533 96.536 -19.881 1.00 97.66 ATOM 140 CG PRO R 145 -8.975 96.872 -19.651 1.00 97.76 ATOM 141 CD PRO R 145 -9.513 95.590 -19.056 1.00 98.81 TER