HEADER OXIDOREDUCTASE 30-JAN-11 3QJS TITLE The structure of and photolytic induced changes of carbon monoxide TITLE 2 binding to the cytochrome ba3-oxidase from Thermus thermophilus COMPND MOL_ID: 3; COMPND 2 MOLECULE: Cytochrome c oxidase polypeptide 2A; COMPND 3 CHAIN: C; COMPND 4 EC: 1.9.3.1; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.80 ANGSTORMS DBREF 3QJS C 1 34 UNP P82543 COXA_THET8 1 34 SEQRES 1 C 33 GLU GLU LYS PRO LYS GLY ALA LEU ALA VAL ILE LEU VAL SEQRES 2 C 33 LEU THR LEU THR ILE LEU VAL PHE TRP LEU GLY VAL TYR SEQRES 3 C 33 ALA VAL PHE PHE ALA ARG GLY ATOM 1 N GLU C 2 -15.763 8.396 -32.894 1.00176.80 ATOM 2 CA GLU C 2 -16.198 8.235 -34.316 1.00181.84 ATOM 3 C GLU C 2 -16.252 9.585 -35.033 1.00184.16 ATOM 4 O GLU C 2 -15.501 9.796 -35.990 1.00135.95 ATOM 5 CB GLU C 2 -17.550 7.511 -34.394 1.00171.22 ATOM 6 CG GLU C 2 -18.480 7.822 -33.210 1.00168.28 ATOM 7 CD GLU C 2 -19.905 7.306 -33.381 1.00172.24 ATOM 8 OE1 GLU C 2 -20.219 6.706 -34.434 1.00176.94 ATOM 9 OE2 GLU C 2 -20.719 7.510 -32.453 1.00134.36 ATOM 10 N GLU C 3 -17.131 10.477 -34.556 1.00179.72 ATOM 11 CA GLU C 3 -17.303 11.840 -35.084 1.00181.36 ATOM 12 C GLU C 3 -18.013 12.763 -34.066 1.00139.90 ATOM 13 O GLU C 3 -17.364 13.375 -33.217 1.00146.59 ATOM 14 CB GLU C 3 -18.059 11.815 -36.429 1.00123.32 ATOM 15 CG GLU C 3 -17.868 13.053 -37.325 1.00141.03 ATOM 16 CD GLU C 3 -16.486 13.121 -37.970 1.00197.82 ATOM 17 OE1 GLU C 3 -16.318 12.603 -39.099 1.00198.99 ATOM 18 OE2 GLU C 3 -15.563 13.685 -37.347 1.00196.84 ATOM 19 N LYS C 4 -19.341 12.829 -34.153 1.00102.40 ATOM 20 CA LYS C 4 -20.149 13.812 -33.429 1.00127.95 ATOM 21 C LYS C 4 -20.750 13.229 -32.121 1.00121.02 ATOM 22 O LYS C 4 -21.487 12.226 -32.145 1.00107.63 ATOM 23 CB LYS C 4 -21.248 14.327 -34.376 1.00130.46 ATOM 24 CG LYS C 4 -21.609 15.813 -34.263 1.00162.56 ATOM 25 CD LYS C 4 -21.987 16.386 -35.649 1.00175.38 ATOM 26 CE LYS C 4 -23.149 17.396 -35.605 1.00162.84 ATOM 27 NZ LYS C 4 -22.923 18.582 -34.716 1.00134.82 ATOM 28 N PRO C 5 -20.443 13.849 -30.968 1.00 95.08 ATOM 29 CA PRO C 5 -21.068 13.324 -29.754 1.00 71.58 ATOM 30 C PRO C 5 -22.502 13.833 -29.656 1.00110.74 ATOM 31 O PRO C 5 -22.841 14.512 -28.671 1.00 67.51 ATOM 32 CB PRO C 5 -20.267 13.984 -28.621 1.00 70.56 ATOM 33 CG PRO C 5 -19.832 15.308 -29.211 1.00125.84 ATOM 34 CD PRO C 5 -19.676 15.082 -30.717 1.00106.13 ATOM 35 N LYS C 6 -23.299 13.522 -30.689 1.00 99.92 ATOM 36 CA LYS C 6 -24.698 13.963 -30.818 1.00 72.94 ATOM 37 C LYS C 6 -25.472 13.814 -29.510 1.00 77.18 ATOM 38 O LYS C 6 -26.123 14.767 -29.049 1.00 78.18 ATOM 39 CB LYS C 6 -25.402 13.164 -31.917 1.00118.29 ATOM 40 CG LYS C 6 -25.138 13.651 -33.331 1.00160.98 ATOM 41 CD LYS C 6 -25.661 12.650 -34.360 1.00159.58 ATOM 42 CE LYS C 6 -26.016 13.313 -35.706 1.00132.78 ATOM 43 NZ LYS C 6 -25.963 12.258 -36.847 1.00115.96 ATOM 44 N GLY C 7 -25.379 12.626 -28.905 1.00 67.06 ATOM 45 CA GLY C 7 -26.069 12.318 -27.661 1.00 63.16 ATOM 46 C GLY C 7 -25.841 13.372 -26.614 1.00 91.64 ATOM 47 O GLY C 7 -26.796 14.007 -26.163 1.00 84.26 ATOM 48 N ALA C 8 -24.572 13.577 -26.253 1.00 79.41 ATOM 49 CA ALA C 8 -24.221 14.594 -25.265 1.00 53.14 ATOM 50 C ALA C 8 -24.858 15.956 -25.550 1.00 56.61 ATOM 51 O ALA C 8 -25.319 16.632 -24.612 1.00 72.42 ATOM 52 CB ALA C 8 -22.732 14.705 -25.112 1.00 70.34 ATOM 53 N LEU C 9 -24.906 16.348 -26.832 1.00 71.70 ATOM 54 CA LEU C 9 -25.436 17.669 -27.223 1.00 69.49 ATOM 55 C LEU C 9 -26.923 17.766 -26.917 1.00 61.25 ATOM 56 O LEU C 9 -27.399 18.768 -26.374 1.00 65.10 ATOM 57 CB LEU C 9 -25.168 17.984 -28.699 1.00 73.57 ATOM 58 CG LEU C 9 -23.701 18.194 -29.088 1.00 72.31 ATOM 59 CD1 LEU C 9 -23.452 17.758 -30.554 1.00 84.41 ATOM 60 CD2 LEU C 9 -23.215 19.608 -28.853 1.00 77.38 ATOM 61 N ALA C 10 -27.635 16.699 -27.267 1.00 61.36 ATOM 62 CA ALA C 10 -29.052 16.563 -26.945 1.00 62.20 ATOM 63 C ALA C 10 -29.297 16.617 -25.439 1.00 73.07 ATOM 64 O ALA C 10 -30.318 17.135 -24.999 1.00 70.34 ATOM 65 CB ALA C 10 -29.601 15.276 -27.521 1.00 59.73 ATOM 66 N VAL C 11 -28.368 16.085 -24.648 1.00 63.32 ATOM 67 CA VAL C 11 -28.463 16.215 -23.200 1.00 55.27 ATOM 68 C VAL C 11 -28.326 17.659 -22.763 1.00 66.80 ATOM 69 O VAL C 11 -29.115 18.140 -21.952 1.00 70.68 ATOM 70 CB VAL C 11 -27.423 15.377 -22.481 1.00 63.82 ATOM 71 CG1 VAL C 11 -27.342 15.771 -20.992 1.00 53.54 ATOM 72 CG2 VAL C 11 -27.781 13.926 -22.626 1.00 67.52 ATOM 73 N ILE C 12 -27.330 18.360 -23.292 1.00 55.32 ATOM 74 CA ILE C 12 -27.133 19.735 -22.865 1.00 52.49 ATOM 75 C ILE C 12 -28.195 20.627 -23.484 1.00 62.76 ATOM 76 O ILE C 12 -28.519 21.693 -22.937 1.00 63.30 ATOM 77 CB ILE C 12 -25.685 20.273 -23.071 1.00 72.32 ATOM 78 CG1 ILE C 12 -25.223 20.121 -24.512 1.00 82.84 ATOM 79 CG2 ILE C 12 -24.697 19.563 -22.149 1.00 77.26 ATOM 80 CD1 ILE C 12 -23.944 20.875 -24.792 1.00 72.75 ATOM 81 N LEU C 13 -28.772 20.172 -24.592 1.00 65.26 ATOM 82 CA LEU C 13 -29.927 20.859 -25.183 1.00 74.87 ATOM 83 C LEU C 13 -31.105 20.850 -24.204 1.00 62.13 ATOM 84 O LEU C 13 -31.633 21.923 -23.870 1.00 74.18 ATOM 85 CB LEU C 13 -30.345 20.230 -26.509 1.00 70.19 ATOM 86 CG LEU C 13 -31.103 21.035 -27.567 1.00 72.04 ATOM 87 CD1 LEU C 13 -32.196 20.166 -28.295 1.00 72.35 ATOM 88 CD2 LEU C 13 -31.694 22.349 -27.041 1.00 60.70 ATOM 89 N VAL C 14 -31.498 19.653 -23.741 1.00 59.55 ATOM 90 CA VAL C 14 -32.543 19.480 -22.712 1.00 64.58 ATOM 91 C VAL C 14 -32.211 20.377 -21.509 1.00 73.94 ATOM 92 O VAL C 14 -33.044 21.181 -21.042 1.00 59.83 ATOM 93 CB VAL C 14 -32.677 17.991 -22.274 1.00 60.98 ATOM 94 CG1 VAL C 14 -33.824 17.784 -21.266 1.00 49.94 ATOM 95 CG2 VAL C 14 -32.870 17.094 -23.483 1.00 62.61 ATOM 96 N LEU C 15 -30.973 20.264 -21.038 1.00 59.32 ATOM 97 CA LEU C 15 -30.505 21.115 -19.969 1.00 52.32 ATOM 98 C LEU C 15 -30.868 22.594 -20.195 1.00 49.05 ATOM 99 O LEU C 15 -31.717 23.137 -19.510 1.00 57.30 ATOM 100 CB LEU C 15 -29.011 20.904 -19.773 1.00 51.22 ATOM 101 CG LEU C 15 -28.477 21.724 -18.600 1.00 55.67 ATOM 102 CD1 LEU C 15 -29.391 21.652 -17.367 1.00 51.08 ATOM 103 CD2 LEU C 15 -27.083 21.285 -18.281 1.00 62.07 ATOM 104 N THR C 16 -30.233 23.208 -21.180 1.00 54.19 ATOM 105 CA THR C 16 -30.516 24.571 -21.620 1.00 60.36 ATOM 106 C THR C 16 -32.011 24.919 -21.637 1.00 62.95 ATOM 107 O THR C 16 -32.447 25.856 -20.957 1.00 56.99 ATOM 108 CB THR C 16 -29.916 24.764 -23.030 1.00 77.34 ATOM 109 OG1 THR C 16 -28.542 24.339 -23.015 1.00 56.87 ATOM 110 CG2 THR C 16 -30.022 26.213 -23.487 1.00 57.87 ATOM 111 N LEU C 17 -32.794 24.163 -22.408 1.00 64.92 ATOM 112 CA LEU C 17 -34.246 24.391 -22.467 1.00 71.17 ATOM 113 C LEU C 17 -34.932 24.363 -21.100 1.00 46.82 ATOM 114 O LEU C 17 -35.759 25.229 -20.813 1.00 56.03 ATOM 115 CB LEU C 17 -34.951 23.428 -23.434 1.00 60.34 ATOM 116 CG LEU C 17 -34.666 23.581 -24.933 1.00 97.17 ATOM 117 CD1 LEU C 17 -35.375 22.490 -25.758 1.00 73.85 ATOM 118 CD2 LEU C 17 -35.012 24.986 -25.426 1.00 71.24 ATOM 119 N THR C 18 -34.612 23.367 -20.271 1.00 53.57 ATOM 120 CA THR C 18 -35.173 23.316 -18.927 1.00 53.79 ATOM 121 C THR C 18 -34.825 24.589 -18.183 1.00 55.49 ATOM 122 O THR C 18 -35.715 25.271 -17.652 1.00 47.77 ATOM 123 CB THR C 18 -34.689 22.114 -18.150 1.00 62.18 ATOM 124 OG1 THR C 18 -34.898 20.963 -18.952 1.00 65.70 ATOM 125 CG2 THR C 18 -35.495 21.932 -16.846 1.00 60.26 ATOM 126 N ILE C 19 -33.531 24.915 -18.186 1.00 52.59 ATOM 127 CA ILE C 19 -33.051 26.179 -17.638 1.00 40.57 ATOM 128 C ILE C 19 -33.869 27.364 -18.137 1.00 58.48 ATOM 129 O ILE C 19 -34.417 28.068 -17.282 1.00 61.09 ATOM 130 CB ILE C 19 -31.527 26.392 -17.808 1.00 57.84 ATOM 131 CG1 ILE C 19 -30.769 25.406 -16.933 1.00 47.17 ATOM 132 CG2 ILE C 19 -31.108 27.813 -17.434 1.00 59.76 ATOM 133 CD1 ILE C 19 -29.272 25.369 -17.190 1.00 46.58 ATOM 134 N LEU C 20 -33.994 27.576 -19.464 1.00 55.65 ATOM 135 CA LEU C 20 -34.824 28.726 -19.983 1.00 47.38 ATOM 136 C LEU C 20 -36.317 28.721 -19.540 1.00 65.78 ATOM 137 O LEU C 20 -36.772 29.697 -18.955 1.00 65.35 ATOM 138 CB LEU C 20 -34.703 28.957 -21.503 1.00 44.38 ATOM 139 CG LEU C 20 -33.342 29.363 -22.103 1.00 81.89 ATOM 140 CD1 LEU C 20 -33.349 29.359 -23.657 1.00 88.79 ATOM 141 CD2 LEU C 20 -32.816 30.706 -21.565 1.00 69.65 ATOM 142 N VAL C 21 -37.055 27.641 -19.811 1.00 51.98 ATOM 143 CA VAL C 21 -38.448 27.478 -19.361 1.00 54.86 ATOM 144 C VAL C 21 -38.621 27.865 -17.878 1.00 55.81 ATOM 145 O VAL C 21 -39.500 28.651 -17.536 1.00 55.93 ATOM 146 CB VAL C 21 -38.964 26.003 -19.636 1.00 95.29 ATOM 147 CG1 VAL C 21 -40.230 25.614 -18.794 1.00 58.49 ATOM 148 CG2 VAL C 21 -39.193 25.771 -21.155 1.00 68.15 ATOM 149 N PHE C 22 -37.775 27.317 -17.013 1.00 48.97 ATOM 150 CA PHE C 22 -37.776 27.646 -15.574 1.00 40.88 ATOM 151 C PHE C 22 -37.519 29.166 -15.331 1.00 70.02 ATOM 152 O PHE C 22 -38.267 29.822 -14.580 1.00 55.95 ATOM 153 CB PHE C 22 -36.707 26.805 -14.820 1.00 59.31 ATOM 154 CG PHE C 22 -37.210 25.472 -14.246 1.00 57.74 ATOM 155 CD1 PHE C 22 -37.699 24.462 -15.052 1.00 51.88 ATOM 156 CD2 PHE C 22 -37.123 25.223 -12.884 1.00 74.09 ATOM 157 CE1 PHE C 22 -38.147 23.239 -14.501 1.00 56.99 ATOM 158 CE2 PHE C 22 -37.559 23.995 -12.336 1.00 60.99 ATOM 159 CZ PHE C 22 -38.064 23.009 -13.159 1.00 44.49 ATOM 160 N TRP C 23 -36.481 29.719 -15.974 1.00 61.69 ATOM 161 CA TRP C 23 -36.020 31.091 -15.693 1.00 37.87 ATOM 162 C TRP C 23 -36.996 32.137 -16.269 1.00 67.11 ATOM 163 O TRP C 23 -37.577 32.919 -15.523 1.00 61.87 ATOM 164 CB TRP C 23 -34.585 31.297 -16.179 1.00 49.65 ATOM 165 CG TRP C 23 -33.836 32.460 -15.528 1.00 47.24 ATOM 166 CD1 TRP C 23 -32.896 32.389 -14.521 1.00 60.48 ATOM 167 CD2 TRP C 23 -33.958 33.845 -15.853 1.00 59.52 ATOM 168 NE1 TRP C 23 -32.438 33.649 -14.199 1.00 54.18 ATOM 169 CE2 TRP C 23 -33.070 34.557 -15.007 1.00 50.06 ATOM 170 CE3 TRP C 23 -34.738 34.560 -16.776 1.00 46.18 ATOM 171 CZ2 TRP C 23 -32.940 35.923 -15.063 1.00 49.33 ATOM 172 CZ3 TRP C 23 -34.596 35.920 -16.837 1.00 46.41 ATOM 173 CH2 TRP C 23 -33.709 36.591 -15.978 1.00 69.78 ATOM 174 N LEU C 24 -37.201 32.131 -17.579 1.00 59.37 ATOM 175 CA LEU C 24 -38.247 32.938 -18.192 1.00 50.15 ATOM 176 C LEU C 24 -39.612 32.753 -17.530 1.00 57.94 ATOM 177 O LEU C 24 -40.340 33.734 -17.378 1.00 52.35 ATOM 178 CB LEU C 24 -38.321 32.676 -19.713 1.00 64.25 ATOM 179 CG LEU C 24 -37.544 33.577 -20.699 1.00 74.62 ATOM 180 CD1 LEU C 24 -36.560 34.622 -20.085 1.00 42.10 ATOM 181 CD2 LEU C 24 -36.825 32.716 -21.730 1.00 52.20 ATOM 182 N GLY C 25 -39.955 31.524 -17.119 1.00 56.76 ATOM 183 CA GLY C 25 -41.243 31.263 -16.415 1.00 37.56 ATOM 184 C GLY C 25 -41.349 32.102 -15.145 1.00 57.27 ATOM 185 O GLY C 25 -42.259 32.911 -15.005 1.00 57.54 ATOM 186 N VAL C 26 -40.388 31.948 -14.237 1.00 51.28 ATOM 187 CA VAL C 26 -40.388 32.732 -13.008 1.00 47.35 ATOM 188 C VAL C 26 -40.176 34.251 -13.289 1.00 63.47 ATOM 189 O VAL C 26 -40.670 35.116 -12.551 1.00 58.95 ATOM 190 CB VAL C 26 -39.384 32.146 -11.916 1.00 47.57 ATOM 191 CG1 VAL C 26 -39.326 33.024 -10.695 1.00 50.29 ATOM 192 CG2 VAL C 26 -39.775 30.731 -11.493 1.00 43.56 ATOM 193 N TYR C 27 -39.448 34.600 -14.344 1.00 56.12 ATOM 194 CA TYR C 27 -39.263 36.030 -14.659 1.00 56.86 ATOM 195 C TYR C 27 -40.624 36.693 -14.968 1.00 57.87 ATOM 196 O TYR C 27 -40.888 37.807 -14.532 1.00 59.59 ATOM 197 CB TYR C 27 -38.319 36.179 -15.826 1.00 59.18 ATOM 198 CG TYR C 27 -37.739 37.546 -16.077 1.00 62.62 ATOM 199 CD1 TYR C 27 -36.660 38.013 -15.339 1.00 66.51 ATOM 200 CD2 TYR C 27 -38.225 38.341 -17.110 1.00 65.82 ATOM 201 CE1 TYR C 27 -36.098 39.253 -15.612 1.00 59.10 ATOM 202 CE2 TYR C 27 -37.686 39.587 -17.379 1.00 56.97 ATOM 203 CZ TYR C 27 -36.613 40.028 -16.640 1.00 59.58 ATOM 204 OH TYR C 27 -36.073 41.264 -16.911 1.00 70.08 ATOM 205 N ALA C 28 -41.501 35.991 -15.683 1.00 51.69 ATOM 206 CA ALA C 28 -42.899 36.446 -15.856 1.00 53.59 ATOM 207 C ALA C 28 -43.726 36.485 -14.568 1.00 62.36 ATOM 208 O ALA C 28 -44.467 37.448 -14.353 1.00 59.04 ATOM 209 CB ALA C 28 -43.630 35.642 -16.952 1.00 47.00 ATOM 210 N VAL C 29 -43.609 35.455 -13.725 1.00 50.67 ATOM 211 CA VAL C 29 -44.292 35.492 -12.428 1.00 60.82 ATOM 212 C VAL C 29 -43.860 36.765 -11.694 1.00 54.31 ATOM 213 O VAL C 29 -44.708 37.494 -11.201 1.00 62.95 ATOM 214 CB VAL C 29 -44.086 34.224 -11.537 1.00 53.24 ATOM 215 CG1 VAL C 29 -44.877 34.358 -10.327 1.00 47.34 ATOM 216 CG2 VAL C 29 -44.554 32.968 -12.240 1.00 48.42 ATOM 217 N PHE C 30 -42.559 37.061 -11.684 1.00 62.18 ATOM 218 CA PHE C 30 -42.016 38.245 -10.991 1.00 50.54 ATOM 219 C PHE C 30 -42.706 39.530 -11.443 1.00 64.48 ATOM 220 O PHE C 30 -43.138 40.329 -10.604 1.00 65.41 ATOM 221 CB PHE C 30 -40.495 38.377 -11.178 1.00 50.91 ATOM 222 CG PHE C 30 -39.879 39.530 -10.417 1.00 47.52 ATOM 223 CD1 PHE C 30 -39.703 39.462 -9.048 1.00 62.25 ATOM 224 CD2 PHE C 30 -39.479 40.681 -11.070 1.00 58.82 ATOM 225 CE1 PHE C 30 -39.152 40.526 -8.341 1.00 62.52 ATOM 226 CE2 PHE C 30 -38.921 41.731 -10.368 1.00 38.16 ATOM 227 CZ PHE C 30 -38.775 41.657 -9.005 1.00 50.18 ATOM 228 N PHE C 31 -42.821 39.730 -12.757 1.00 66.95 ATOM 229 CA PHE C 31 -43.445 40.961 -13.276 1.00 66.90 ATOM 230 C PHE C 31 -44.930 40.998 -13.002 1.00 47.91 ATOM 231 O PHE C 31 -45.463 42.033 -12.660 1.00 62.65 ATOM 232 CB PHE C 31 -43.111 41.238 -14.757 1.00 63.89 ATOM 233 CG PHE C 31 -41.839 41.996 -14.915 1.00 58.67 ATOM 234 CD1 PHE C 31 -41.790 43.349 -14.596 1.00 66.88 ATOM 235 CD2 PHE C 31 -40.672 41.351 -15.268 1.00 42.74 ATOM 236 CE1 PHE C 31 -40.612 44.062 -14.672 1.00 58.29 ATOM 237 CE2 PHE C 31 -39.486 42.044 -15.323 1.00 60.46 ATOM 238 CZ PHE C 31 -39.453 43.404 -15.034 1.00 69.99 ATOM 239 N ALA C 32 -45.583 39.846 -13.081 1.00 53.86 ATOM 240 CA ALA C 32 -47.003 39.805 -12.856 1.00 51.82 ATOM 241 C ALA C 32 -47.385 40.084 -11.381 1.00 64.30 ATOM 242 O ALA C 32 -48.561 40.237 -11.061 1.00 76.40 ATOM 243 CB ALA C 32 -47.578 38.487 -13.389 1.00 39.38 ATOM 244 N ARG C 33 -46.377 40.219 -10.522 1.00 54.91 ATOM 245 CA ARG C 33 -46.533 40.407 -9.076 1.00 56.15 ATOM 246 C ARG C 33 -45.806 41.668 -8.631 1.00 75.91 ATOM 247 O ARG C 33 -45.689 41.903 -7.408 1.00 64.73 ATOM 248 CB ARG C 33 -45.893 39.238 -8.311 1.00 58.83 ATOM 249 CG ARG C 33 -46.679 37.954 -8.282 1.00 65.21 ATOM 250 CD ARG C 33 -45.940 36.906 -7.438 1.00 46.14 ATOM 251 NE ARG C 33 -46.427 35.539 -7.651 1.00 53.19 ATOM 252 CZ ARG C 33 -45.933 34.450 -7.050 1.00 58.19 ATOM 253 NH1 ARG C 33 -46.471 33.285 -7.325 1.00 48.38 ATOM 254 NH2 ARG C 33 -44.923 34.503 -6.170 1.00 63.99 ATOM 255 N GLY C 34 -45.323 42.454 -9.611 1.00 67.53 ATOM 256 CA GLY C 34 -44.345 43.568 -9.398 1.00 61.85 ATOM 257 C GLY C 34 -44.772 45.040 -9.217 1.00117.83 ATOM 258 O GLY C 34 -45.957 45.422 -9.235 1.00 79.40 ATOM 259 OXT GLY C 34 -43.909 45.929 -9.048 1.00 74.14 TER