HEADER ISOMERASE/DNA/ANTIBIOTIC 31-DEC-69 3RAE TITLE Quinolone(Levofloxacin)-DNA cleavage complex of type IV topoisomerase TITLE 2 from S. pneumoniae COMPND MOL_ID: 2; COMPND 2 MOLECULE: DNA topoisomerase 4 subunit B; COMPND 3 CHAIN: C, D; COMPND 4 EC: 5.99.1.-; COMPND 5 FRAGMENT: UNP residues ; COMPND 6 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.90 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER D 167 REMARK 465 LYS D 168 REMARK 465 GLY D 169 REMARK 465 LYS D 170 REMARK 465 GLY D 171 REMARK 465 LYS D 172 REMARK 465 LYS D 173 REMARK 465 GLU D 174 REMARK 465 GLU D 175 REMARK 465 VAL D 176 REMARK 465 ALA D 177 REMARK 465 PHE D 192 REMARK 465 GLY D 193 REMARK 465 LYS D 194 REMARK 465 GLY D 195 REMARK 465 ALA D 196 REMARK 465 THR D 197 DBREF 3RAE D 404 647 UNP Q59961 PARE_STRPN 404 647 SEQRES 1 D 42 PRO LEU TYR LYS MET SER LYS GLY LYS GLY LYS LYS GLU SEQRES 2 D 42 GLU VAL ALA TYR ALA TRP THR ASP GLY GLU LEU GLU GLU SEQRES 3 D 42 LEU ARG LYS GLN PHE GLY LYS GLY ALA THR LEU GLN ARG SEQRES 4 D 42 TYR LYS GLY ATOM 1 N PRO D 541 -62.750 88.252 -14.619 1.00112.46 ATOM 2 CA PRO D 541 -64.110 87.740 -14.415 1.00111.74 ATOM 3 C PRO D 541 -64.096 86.301 -13.930 1.00107.01 ATOM 4 O PRO D 541 -63.388 85.466 -14.490 1.00104.91 ATOM 5 CB PRO D 541 -64.717 87.805 -15.816 1.00114.90 ATOM 6 CG PRO D 541 -63.555 87.598 -16.721 1.00118.78 ATOM 7 CD PRO D 541 -62.369 88.254 -16.043 1.00117.92 ATOM 8 N LEU D 542 -64.878 86.014 -12.898 1.00108.21 ATOM 9 CA LEU D 542 -64.936 84.661 -12.364 1.00107.21 ATOM 10 C LEU D 542 -65.743 83.740 -13.292 1.00106.74 ATOM 11 O LEU D 542 -65.412 82.563 -13.449 1.00 99.70 ATOM 12 CB LEU D 542 -65.494 84.661 -10.929 1.00 93.49 ATOM 13 CG LEU D 542 -64.720 85.475 -9.879 1.00 77.02 ATOM 14 N TYR D 543 -66.780 84.286 -13.926 1.00113.77 ATOM 15 CA TYR D 543 -67.722 83.464 -14.683 1.00121.40 ATOM 16 C TYR D 543 -67.828 83.870 -16.147 1.00123.83 ATOM 17 O TYR D 543 -67.633 85.037 -16.491 1.00127.21 ATOM 18 CB TYR D 543 -69.110 83.503 -14.031 1.00128.37 ATOM 19 CG TYR D 543 -69.096 83.223 -12.541 1.00134.53 ATOM 20 CD1 TYR D 543 -68.890 81.936 -12.056 1.00135.71 ATOM 21 CD2 TYR D 543 -69.283 84.245 -11.620 1.00135.32 ATOM 22 CE1 TYR D 543 -68.868 81.676 -10.697 1.00134.41 ATOM 23 CE2 TYR D 543 -69.264 83.993 -10.260 1.00137.23 ATOM 24 CZ TYR D 543 -69.056 82.707 -9.804 1.00136.47 ATOM 25 OH TYR D 543 -69.035 82.452 -8.451 1.00135.67 ATOM 26 N LYS D 544 -68.132 82.892 -17.001 1.00125.61 ATOM 27 CA LYS D 544 -68.372 83.134 -18.427 1.00128.58 ATOM 28 C LYS D 544 -69.675 82.487 -18.907 1.00125.97 ATOM 29 O LYS D 544 -69.717 81.280 -19.149 1.00128.35 ATOM 30 CB LYS D 544 -67.201 82.626 -19.280 1.00130.52 ATOM 31 N MET D 545 -70.730 83.254 -19.117 1.00120.75 ATOM 32 CA MET D 545 -71.926 82.644 -19.680 1.00116.50 ATOM 33 C MET D 545 -72.274 83.232 -21.040 1.00114.06 ATOM 34 O MET D 545 -72.005 82.617 -22.071 1.00108.68 ATOM 35 CB MET D 545 -73.110 82.731 -18.723 1.00108.16 ATOM 36 CG MET D 545 -73.928 81.452 -18.641 1.00 99.61 ATOM 37 N TYR D 557 -70.228 87.597 -19.239 1.00113.81 ATOM 38 CA TYR D 557 -69.284 87.613 -18.130 1.00122.55 ATOM 39 C TYR D 557 -69.874 88.226 -16.875 1.00126.35 ATOM 40 O TYR D 557 -70.529 89.250 -16.935 1.00120.74 ATOM 41 CB TYR D 557 -68.028 88.394 -18.503 1.00121.71 ATOM 42 CG TYR D 557 -67.271 87.834 -19.672 1.00123.51 ATOM 43 CD1 TYR D 557 -67.041 88.598 -20.799 1.00126.52 ATOM 44 CD2 TYR D 557 -66.779 86.549 -19.646 1.00122.34 ATOM 45 CE1 TYR D 557 -66.353 88.097 -21.861 1.00128.53 ATOM 46 CE2 TYR D 557 -66.091 86.041 -20.704 1.00125.88 ATOM 47 CZ TYR D 557 -65.878 86.819 -21.808 1.00127.78 ATOM 48 OH TYR D 557 -65.189 86.305 -22.872 1.00124.19 ATOM 49 N ALA D 558 -69.611 87.590 -15.740 1.00131.46 ATOM 50 CA ALA D 558 -70.000 88.097 -14.424 1.00128.96 ATOM 51 C ALA D 558 -68.853 87.984 -13.427 1.00128.16 ATOM 52 O ALA D 558 -68.092 87.014 -13.454 1.00120.85 ATOM 53 CB ALA D 558 -71.217 87.359 -13.908 1.00123.24 ATOM 54 N TRP D 559 -68.747 88.981 -12.548 1.00134.74 ATOM 55 CA TRP D 559 -67.660 89.064 -11.567 1.00133.33 ATOM 56 C TRP D 559 -68.092 88.606 -10.180 1.00130.34 ATOM 57 O TRP D 559 -67.280 88.086 -9.414 1.00129.20 ATOM 58 CB TRP D 559 -67.135 90.499 -11.463 1.00130.20 ATOM 59 CG TRP D 559 -66.297 90.946 -12.616 1.00136.90 ATOM 60 CD1 TRP D 559 -64.980 91.296 -12.579 1.00140.23 ATOM 61 CD2 TRP D 559 -66.716 91.100 -13.981 1.00144.96 ATOM 62 NE1 TRP D 559 -64.551 91.659 -13.834 1.00147.85 ATOM 63 CE2 TRP D 559 -65.597 91.546 -14.712 1.00148.57 ATOM 64 CE3 TRP D 559 -67.927 90.902 -14.655 1.00147.77 ATOM 65 CZ2 TRP D 559 -65.652 91.798 -16.086 1.00149.10 ATOM 66 CZ3 TRP D 559 -67.979 91.154 -16.020 1.00148.60 ATOM 67 CH2 TRP D 559 -66.849 91.596 -16.718 1.00148.30 ATOM 68 N THR D 560 -69.364 88.826 -9.858 1.00130.63 ATOM 69 CA THR D 560 -69.914 88.478 -8.552 1.00129.33 ATOM 70 C THR D 560 -70.980 87.400 -8.716 1.00134.42 ATOM 71 O THR D 560 -71.722 87.408 -9.699 1.00135.35 ATOM 72 CB THR D 560 -70.531 89.709 -7.856 1.00124.39 ATOM 73 N ASP D 561 -71.048 86.471 -7.762 1.00137.55 ATOM 74 CA ASP D 561 -72.023 85.379 -7.818 1.00134.15 ATOM 75 C ASP D 561 -73.426 85.926 -8.096 1.00138.76 ATOM 76 O ASP D 561 -74.278 85.234 -8.662 1.00135.32 ATOM 77 CB ASP D 561 -72.002 84.552 -6.526 1.00120.58 ATOM 78 N GLY D 562 -73.646 87.180 -7.705 1.00141.33 ATOM 79 CA GLY D 562 -74.909 87.858 -7.940 1.00139.36 ATOM 80 C GLY D 562 -75.131 88.190 -9.402 1.00139.32 ATOM 81 O GLY D 562 -76.241 88.039 -9.916 1.00135.49 ATOM 82 N GLU D 563 -74.073 88.651 -10.067 1.00141.72 ATOM 83 CA GLU D 563 -74.113 88.903 -11.506 1.00143.33 ATOM 84 C GLU D 563 -74.290 87.589 -12.272 1.00148.07 ATOM 85 O GLU D 563 -74.766 87.577 -13.411 1.00143.64 ATOM 86 CB GLU D 563 -72.844 89.631 -11.966 1.00136.39 ATOM 87 N LEU D 564 -73.911 86.483 -11.631 1.00152.16 ATOM 88 CA LEU D 564 -74.067 85.155 -12.218 1.00150.86 ATOM 89 C LEU D 564 -75.543 84.775 -12.376 1.00162.32 ATOM 90 O LEU D 564 -75.964 84.362 -13.456 1.00168.75 ATOM 91 CB LEU D 564 -73.322 84.102 -11.389 1.00137.98 ATOM 92 N GLU D 565 -76.326 84.926 -11.307 1.00161.94 ATOM 93 CA GLU D 565 -77.753 84.583 -11.337 1.00155.02 ATOM 94 C GLU D 565 -78.574 85.506 -12.248 1.00156.70 ATOM 95 O GLU D 565 -79.729 85.212 -12.560 1.00155.14 ATOM 96 CB GLU D 565 -78.338 84.581 -9.922 1.00144.69 ATOM 97 N GLU D 566 -77.970 86.613 -12.675 1.00158.63 ATOM 98 CA GLU D 566 -78.648 87.584 -13.533 1.00163.94 ATOM 99 C GLU D 566 -78.473 87.291 -15.030 1.00171.31 ATOM 100 O GLU D 566 -79.396 87.505 -15.821 1.00176.72 ATOM 101 CB GLU D 566 -78.175 89.005 -13.212 1.00162.42 ATOM 102 N LEU D 567 -77.290 86.812 -15.416 1.00167.33 ATOM 103 CA LEU D 567 -77.049 86.399 -16.799 1.00160.13 ATOM 104 C LEU D 567 -77.912 85.187 -17.155 1.00160.57 ATOM 105 O LEU D 567 -78.457 85.112 -18.253 1.00163.35 ATOM 106 CB LEU D 567 -75.565 86.095 -17.035 1.00149.35 ATOM 107 N ARG D 568 -78.040 84.249 -16.217 1.00157.85 ATOM 108 CA ARG D 568 -78.890 83.071 -16.398 1.00152.60 ATOM 109 C ARG D 568 -80.346 83.461 -16.670 1.00159.01 ATOM 110 O ARG D 568 -81.110 82.683 -17.245 1.00160.78 ATOM 111 CB ARG D 568 -78.802 82.141 -15.181 1.00138.85 ATOM 112 N LYS D 569 -80.724 84.666 -16.253 1.00159.27 ATOM 113 CA LYS D 569 -82.054 85.187 -16.541 1.00155.51 ATOM 114 C LYS D 569 -82.164 85.549 -18.020 1.00158.58 ATOM 115 O LYS D 569 -82.957 84.956 -18.753 1.00159.94 ATOM 116 CB LYS D 569 -82.365 86.402 -15.663 1.00150.69 ATOM 117 N GLN D 570 -81.354 86.513 -18.454 1.00158.28 ATOM 118 CA GLN D 570 -81.371 86.979 -19.843 1.00156.89 ATOM 119 C GLN D 570 -80.804 85.935 -20.804 1.00153.05 ATOM 120 O GLN D 570 -81.177 85.885 -21.977 1.00151.99 ATOM 121 CB GLN D 570 -80.602 88.298 -19.982 1.00153.02 ATOM 122 N LEU D 577 -72.308 77.327 -18.126 1.00 94.32 ATOM 123 CA LEU D 577 -71.409 78.320 -17.528 1.00105.59 ATOM 124 C LEU D 577 -69.984 77.791 -17.341 1.00114.05 ATOM 125 O LEU D 577 -69.782 76.713 -16.777 1.00112.16 ATOM 126 CB LEU D 577 -71.956 78.837 -16.183 1.00 88.06 ATOM 127 N GLN D 578 -69.004 78.557 -17.823 1.00118.14 ATOM 128 CA GLN D 578 -67.588 78.283 -17.568 1.00115.54 ATOM 129 C GLN D 578 -67.091 79.109 -16.378 1.00111.38 ATOM 130 O GLN D 578 -67.052 80.342 -16.434 1.00102.72 ATOM 131 CB GLN D 578 -66.733 78.580 -18.808 1.00110.35 ATOM 132 N ARG D 579 -66.726 78.424 -15.298 1.00115.58 ATOM 133 CA ARG D 579 -66.179 79.085 -14.112 1.00115.34 ATOM 134 C ARG D 579 -64.649 79.185 -14.215 1.00116.45 ATOM 135 O ARG D 579 -63.936 78.200 -14.009 1.00113.79 ATOM 136 CB ARG D 579 -66.607 78.347 -12.832 1.00104.18 ATOM 137 N TYR D 580 -64.153 80.379 -14.536 1.00116.15 ATOM 138 CA TYR D 580 -62.723 80.580 -14.780 1.00117.38 ATOM 139 C TYR D 580 -61.827 80.237 -13.585 1.00108.69 ATOM 140 O TYR D 580 -61.958 80.815 -12.500 1.00 89.28 ATOM 141 CB TYR D 580 -62.444 81.988 -15.332 1.00123.47 ATOM 142 CG TYR D 580 -62.754 82.096 -16.814 1.00137.42 ATOM 143 CD1 TYR D 580 -62.427 81.058 -17.680 1.00147.47 ATOM 144 CD2 TYR D 580 -63.395 83.212 -17.344 1.00140.31 ATOM 145 CE1 TYR D 580 -62.715 81.129 -19.031 1.00153.38 ATOM 146 CE2 TYR D 580 -63.686 83.294 -18.702 1.00145.77 ATOM 147 CZ TYR D 580 -63.341 82.245 -19.539 1.00152.94 ATOM 148 OH TYR D 580 -63.619 82.297 -20.888 1.00156.01 ATOM 149 N LYS D 581 -60.924 79.280 -13.816 1.00112.61 ATOM 150 CA LYS D 581 -59.981 78.789 -12.810 1.00111.21 ATOM 151 C LYS D 581 -58.666 79.585 -12.810 1.00115.38 ATOM 152 O LYS D 581 -57.778 79.332 -11.996 1.00101.31 ATOM 153 CB LYS D 581 -59.678 77.298 -13.041 1.00109.71 ATOM 154 CG LYS D 581 -60.901 76.382 -13.126 1.00108.22 ATOM 155 CD LYS D 581 -60.517 74.967 -13.563 1.00103.00 ATOM 156 N GLY D 582 -58.543 80.538 -13.732 1.00 93.03 ATOM 157 CA GLY D 582 -57.354 81.372 -13.820 1.00 98.14 ATOM 158 C GLY D 582 -57.226 82.088 -15.153 1.00 98.49 ATOM 159 O GLY D 582 -58.022 81.849 -16.063 1.00101.13 TER