HEADER OXIDOREDUCTASE 17-MAY-11 3S33 TITLE Structure of Thermus thermophilus cytochrome ba3 oxidase 10s after Xe TITLE 2 depressurization COMPND MOL_ID: 3; COMPND 2 MOLECULE: Cytochrome c oxidase polypeptide 2A; COMPND 3 CHAIN: C; COMPND 4 EC: 1.9.3.1; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 4.45 ANGSTORMS DBREF 3S33 C 2 34 UNP P82543 COXA_THET8 2 34 SEQRES 1 C 33 GLU GLU LYS PRO LYS GLY ALA LEU ALA VAL ILE LEU VAL SEQRES 2 C 33 LEU THR LEU THR ILE LEU VAL PHE TRP LEU GLY VAL TYR SEQRES 3 C 33 ALA VAL PHE PHE ALA ARG GLY ATOM 1 N GLU C 2 4.139 -0.924 17.199 1.00130.50 ATOM 2 CA GLU C 2 3.786 -0.858 18.656 1.00130.50 ATOM 3 C GLU C 2 5.017 -0.860 19.576 1.00130.50 ATOM 4 O GLU C 2 5.141 0.047 20.399 1.00130.50 ATOM 5 CB GLU C 2 2.789 -1.962 19.058 1.00130.50 ATOM 6 CG GLU C 2 3.236 -3.394 18.719 1.00130.50 ATOM 7 CD GLU C 2 2.268 -4.463 19.205 1.00130.50 ATOM 8 OE1 GLU C 2 1.958 -4.489 20.418 1.00130.50 ATOM 9 OE2 GLU C 2 1.823 -5.287 18.374 1.00130.50 ATOM 10 N GLU C 3 5.887 -1.882 19.447 1.00130.50 ATOM 11 CA GLU C 3 7.185 -1.987 20.182 1.00130.50 ATOM 12 C GLU C 3 8.293 -2.863 19.565 1.00130.50 ATOM 13 O GLU C 3 8.367 -3.023 18.339 1.00130.50 ATOM 14 CB GLU C 3 7.002 -2.428 21.642 1.00130.50 ATOM 15 CG GLU C 3 8.352 -2.607 22.446 1.00130.50 ATOM 16 CD GLU C 3 9.348 -1.416 22.373 1.00130.50 ATOM 17 OE1 GLU C 3 9.510 -0.701 23.392 1.00130.50 ATOM 18 OE2 GLU C 3 9.980 -1.209 21.307 1.00130.50 ATOM 19 N LYS C 4 9.162 -3.390 20.448 1.00130.50 ATOM 20 CA LYS C 4 10.257 -4.296 20.100 1.00130.50 ATOM 21 C LYS C 4 9.693 -5.448 19.310 1.00130.50 ATOM 22 O LYS C 4 8.593 -5.943 19.609 1.00130.50 ATOM 23 CB LYS C 4 11.003 -4.849 21.336 1.00130.50 ATOM 24 CG LYS C 4 11.653 -6.247 21.099 1.00130.50 ATOM 25 CD LYS C 4 12.801 -6.628 22.046 1.00130.50 ATOM 26 CE LYS C 4 12.505 -7.882 22.887 1.00130.50 ATOM 27 NZ LYS C 4 13.564 -8.153 23.914 1.00130.50 ATOM 28 N PRO C 5 10.436 -5.869 18.277 1.00130.50 ATOM 29 CA PRO C 5 10.086 -7.089 17.580 1.00130.50 ATOM 30 C PRO C 5 10.508 -8.295 18.422 1.00130.50 ATOM 31 O PRO C 5 11.563 -8.889 18.178 1.00130.50 ATOM 32 CB PRO C 5 10.889 -6.994 16.273 1.00130.50 ATOM 33 CG PRO C 5 11.389 -5.576 16.201 1.00130.50 ATOM 34 CD PRO C 5 11.554 -5.169 17.622 1.00130.50 ATOM 35 N LYS C 6 9.687 -8.620 19.425 1.00130.50 ATOM 36 CA LYS C 6 9.876 -9.802 20.268 1.00130.50 ATOM 37 C LYS C 6 9.809 -11.062 19.411 1.00130.50 ATOM 38 O LYS C 6 10.641 -11.960 19.562 1.00130.50 ATOM 39 CB LYS C 6 8.823 -9.864 21.389 1.00130.50 ATOM 40 CG LYS C 6 9.152 -9.019 22.624 1.00130.50 ATOM 41 CD LYS C 6 8.085 -9.128 23.711 1.00130.50 ATOM 42 CE LYS C 6 8.205 -10.423 24.506 1.00130.50 ATOM 43 NZ LYS C 6 7.248 -10.452 25.646 1.00130.50 ATOM 44 N GLY C 7 8.823 -11.105 18.509 1.00130.50 ATOM 45 CA GLY C 7 8.650 -12.204 17.554 1.00130.50 ATOM 46 C GLY C 7 9.816 -12.383 16.594 1.00130.50 ATOM 47 O GLY C 7 10.241 -13.512 16.337 1.00130.50 ATOM 48 N ALA C 8 10.329 -11.272 16.063 1.00130.50 ATOM 49 CA ALA C 8 11.504 -11.295 15.183 1.00130.50 ATOM 50 C ALA C 8 12.778 -11.693 15.927 1.00130.50 ATOM 51 O ALA C 8 13.570 -12.492 15.419 1.00130.50 ATOM 52 CB ALA C 8 11.694 -9.951 14.493 1.00130.50 ATOM 53 N LEU C 9 12.961 -11.134 17.125 1.00130.50 ATOM 54 CA LEU C 9 14.133 -11.417 17.964 1.00130.50 ATOM 55 C LEU C 9 14.134 -12.821 18.570 1.00130.50 ATOM 56 O LEU C 9 15.186 -13.334 18.961 1.00130.50 ATOM 57 CB LEU C 9 14.293 -10.356 19.057 1.00130.50 ATOM 58 CG LEU C 9 14.885 -9.018 18.595 1.00130.50 ATOM 59 CD1 LEU C 9 14.519 -7.911 19.553 1.00130.50 ATOM 60 CD2 LEU C 9 16.404 -9.099 18.428 1.00130.50 ATOM 61 N ALA C 10 12.953 -13.427 18.657 1.00130.50 ATOM 62 CA ALA C 10 12.839 -14.838 18.990 1.00130.50 ATOM 63 C ALA C 10 13.323 -15.667 17.800 1.00130.50 ATOM 64 O ALA C 10 14.093 -16.616 17.974 1.00130.50 ATOM 65 CB ALA C 10 11.399 -15.197 19.356 1.00130.50 ATOM 66 N VAL C 11 12.891 -15.283 16.595 1.00130.50 ATOM 67 CA VAL C 11 13.231 -16.009 15.363 1.00130.50 ATOM 68 C VAL C 11 14.741 -16.056 15.123 1.00130.50 ATOM 69 O VAL C 11 15.313 -17.133 14.931 1.00130.50 ATOM 70 CB VAL C 11 12.474 -15.449 14.125 1.00130.50 ATOM 71 CG1 VAL C 11 13.060 -15.996 12.826 1.00130.50 ATOM 72 CG2 VAL C 11 11.001 -15.808 14.209 1.00130.50 ATOM 73 N ILE C 12 15.382 -14.891 15.157 1.00130.50 ATOM 74 CA ILE C 12 16.836 -14.816 15.007 1.00130.50 ATOM 75 C ILE C 12 17.592 -15.390 16.214 1.00130.50 ATOM 76 O ILE C 12 18.788 -15.656 16.118 1.00130.50 ATOM 77 CB ILE C 12 17.331 -13.379 14.705 1.00130.50 ATOM 78 CG1 ILE C 12 17.022 -12.442 15.882 1.00130.50 ATOM 79 CG2 ILE C 12 16.731 -12.874 13.391 1.00130.50 ATOM 80 CD1 ILE C 12 18.045 -11.343 16.098 1.00130.50 ATOM 81 N LEU C 13 16.905 -15.567 17.343 1.00130.50 ATOM 82 CA LEU C 13 17.497 -16.268 18.479 1.00130.50 ATOM 83 C LEU C 13 17.598 -17.752 18.143 1.00130.50 ATOM 84 O LEU C 13 18.652 -18.364 18.342 1.00130.50 ATOM 85 CB LEU C 13 16.698 -16.043 19.772 1.00130.50 ATOM 86 CG LEU C 13 17.276 -16.493 21.132 1.00130.50 ATOM 87 CD1 LEU C 13 16.850 -17.909 21.546 1.00130.50 ATOM 88 CD2 LEU C 13 18.801 -16.292 21.275 1.00130.50 ATOM 89 N VAL C 14 16.504 -18.312 17.622 1.00130.50 ATOM 90 CA VAL C 14 16.468 -19.710 17.184 1.00130.50 ATOM 91 C VAL C 14 17.531 -19.940 16.107 1.00130.50 ATOM 92 O VAL C 14 18.336 -20.872 16.211 1.00130.50 ATOM 93 CB VAL C 14 15.053 -20.132 16.688 1.00130.50 ATOM 94 CG1 VAL C 14 15.050 -21.581 16.211 1.00130.50 ATOM 95 CG2 VAL C 14 14.021 -19.950 17.793 1.00130.50 ATOM 96 N LEU C 15 17.540 -19.068 15.098 1.00130.50 ATOM 97 CA LEU C 15 18.555 -19.091 14.046 1.00130.50 ATOM 98 C LEU C 15 19.971 -19.061 14.636 1.00130.50 ATOM 99 O LEU C 15 20.820 -19.855 14.240 1.00130.50 ATOM 100 CB LEU C 15 18.341 -17.929 13.062 1.00130.50 ATOM 101 CG LEU C 15 19.373 -17.658 11.956 1.00130.50 ATOM 102 CD1 LEU C 15 19.263 -18.643 10.801 1.00130.50 ATOM 103 CD2 LEU C 15 19.236 -16.235 11.440 1.00130.50 ATOM 104 N THR C 16 20.205 -18.164 15.593 1.00130.50 ATOM 105 CA THR C 16 21.504 -18.046 16.252 1.00130.50 ATOM 106 C THR C 16 21.879 -19.334 16.986 1.00130.50 ATOM 107 O THR C 16 23.025 -19.779 16.907 1.00130.50 ATOM 108 CB THR C 16 21.541 -16.850 17.231 1.00130.50 ATOM 109 OG1 THR C 16 21.181 -15.650 16.537 1.00130.50 ATOM 110 CG2 THR C 16 22.932 -16.674 17.818 1.00130.50 ATOM 111 N LEU C 17 20.912 -19.927 17.687 1.00130.50 ATOM 112 CA LEU C 17 21.140 -21.174 18.425 1.00130.50 ATOM 113 C LEU C 17 21.434 -22.352 17.495 1.00130.50 ATOM 114 O LEU C 17 22.308 -23.175 17.784 1.00130.50 ATOM 115 CB LEU C 17 19.956 -21.507 19.350 1.00130.50 ATOM 116 CG LEU C 17 19.726 -20.720 20.655 1.00130.50 ATOM 117 CD1 LEU C 17 18.503 -21.270 21.394 1.00130.50 ATOM 118 CD2 LEU C 17 20.952 -20.712 21.585 1.00130.50 ATOM 119 N THR C 18 20.704 -22.418 16.382 1.00130.50 ATOM 120 CA THR C 18 20.883 -23.466 15.368 1.00130.50 ATOM 121 C THR C 18 22.278 -23.422 14.728 1.00130.50 ATOM 122 O THR C 18 22.933 -24.456 14.582 1.00130.50 ATOM 123 CB THR C 18 19.797 -23.379 14.263 1.00130.50 ATOM 124 OG1 THR C 18 18.512 -23.172 14.867 1.00130.50 ATOM 125 CG2 THR C 18 19.761 -24.658 13.417 1.00130.50 ATOM 126 N ILE C 19 22.717 -22.222 14.352 1.00130.50 ATOM 127 CA ILE C 19 24.059 -22.008 13.809 1.00130.50 ATOM 128 C ILE C 19 25.122 -22.548 14.764 1.00130.50 ATOM 129 O ILE C 19 26.038 -23.250 14.340 1.00130.50 ATOM 130 CB ILE C 19 24.335 -20.506 13.525 1.00130.50 ATOM 131 CG1 ILE C 19 23.407 -19.978 12.427 1.00130.50 ATOM 132 CG2 ILE C 19 25.803 -20.278 13.134 1.00130.50 ATOM 133 CD1 ILE C 19 23.170 -18.474 12.502 1.00130.50 ATOM 134 N LEU C 20 24.988 -22.226 16.049 1.00130.50 ATOM 135 CA LEU C 20 25.960 -22.643 17.059 1.00130.50 ATOM 136 C LEU C 20 26.023 -24.167 17.229 1.00130.50 ATOM 137 O LEU C 20 27.109 -24.750 17.187 1.00130.50 ATOM 138 CB LEU C 20 25.692 -21.940 18.396 1.00130.50 ATOM 139 CG LEU C 20 25.861 -20.416 18.423 1.00130.50 ATOM 140 CD1 LEU C 20 25.306 -19.842 19.721 1.00130.50 ATOM 141 CD2 LEU C 20 27.319 -20.000 18.207 1.00130.50 ATOM 142 N VAL C 21 24.861 -24.801 17.401 1.00130.50 ATOM 143 CA VAL C 21 24.754 -26.264 17.492 1.00130.50 ATOM 144 C VAL C 21 25.458 -26.940 16.313 1.00130.50 ATOM 145 O VAL C 21 26.222 -27.888 16.499 1.00130.50 ATOM 146 CB VAL C 21 23.267 -26.722 17.576 1.00130.50 ATOM 147 CG1 VAL C 21 23.118 -28.220 17.300 1.00130.50 ATOM 148 CG2 VAL C 21 22.676 -26.364 18.934 1.00130.50 ATOM 149 N PHE C 22 25.196 -26.432 15.109 1.00130.50 ATOM 150 CA PHE C 22 25.849 -26.901 13.888 1.00130.50 ATOM 151 C PHE C 22 27.352 -26.643 13.898 1.00130.50 ATOM 152 O PHE C 22 28.136 -27.556 13.637 1.00130.50 ATOM 153 CB PHE C 22 25.216 -26.249 12.653 1.00130.50 ATOM 154 CG PHE C 22 24.090 -27.041 12.057 1.00130.50 ATOM 155 CD1 PHE C 22 22.915 -27.266 12.775 1.00130.50 ATOM 156 CD2 PHE C 22 24.198 -27.556 10.771 1.00130.50 ATOM 157 CE1 PHE C 22 21.866 -28.001 12.222 1.00130.50 ATOM 158 CE2 PHE C 22 23.154 -28.292 10.204 1.00130.50 ATOM 159 CZ PHE C 22 21.986 -28.515 10.932 1.00130.50 ATOM 160 N TRP C 23 27.748 -25.409 14.211 1.00130.50 ATOM 161 CA TRP C 23 29.147 -25.001 14.112 1.00130.50 ATOM 162 C TRP C 23 30.003 -25.656 15.178 1.00130.50 ATOM 163 O TRP C 23 31.030 -26.255 14.866 1.00130.50 ATOM 164 CB TRP C 23 29.288 -23.483 14.184 1.00130.50 ATOM 165 CG TRP C 23 30.480 -22.984 13.439 1.00130.50 ATOM 166 CD1 TRP C 23 30.541 -22.666 12.114 1.00130.50 ATOM 167 CD2 TRP C 23 31.792 -22.754 13.967 1.00130.50 ATOM 168 NE1 TRP C 23 31.806 -22.246 11.782 1.00130.50 ATOM 169 CE2 TRP C 23 32.595 -22.289 12.900 1.00130.50 ATOM 170 CE3 TRP C 23 32.367 -22.888 15.238 1.00130.50 ATOM 171 CZ2 TRP C 23 33.944 -21.959 13.065 1.00130.50 ATOM 172 CZ3 TRP C 23 33.708 -22.559 15.401 1.00130.50 ATOM 173 CH2 TRP C 23 34.481 -22.100 14.319 1.00130.50 ATOM 174 N LEU C 24 29.564 -25.545 16.429 1.00130.50 ATOM 175 CA LEU C 24 30.275 -26.121 17.574 1.00130.50 ATOM 176 C LEU C 24 30.271 -27.654 17.546 1.00130.50 ATOM 177 O LEU C 24 31.268 -28.293 17.908 1.00130.50 ATOM 178 CB LEU C 24 29.675 -25.601 18.890 1.00130.50 ATOM 179 CG LEU C 24 30.092 -24.243 19.490 1.00130.50 ATOM 180 CD1 LEU C 24 30.491 -23.170 18.458 1.00130.50 ATOM 181 CD2 LEU C 24 28.988 -23.710 20.410 1.00130.50 ATOM 182 N GLY C 25 29.147 -28.225 17.108 1.00130.50 ATOM 183 CA GLY C 25 28.981 -29.674 16.976 1.00130.50 ATOM 184 C GLY C 25 29.941 -30.297 15.982 1.00130.50 ATOM 185 O GLY C 25 30.516 -31.350 16.251 1.00130.50 ATOM 186 N VAL C 26 30.119 -29.647 14.837 1.00130.50 ATOM 187 CA VAL C 26 31.072 -30.115 13.836 1.00130.50 ATOM 188 C VAL C 26 32.501 -29.702 14.209 1.00130.50 ATOM 189 O VAL C 26 33.443 -30.472 14.002 1.00130.50 ATOM 190 CB VAL C 26 30.674 -29.668 12.405 1.00130.50 ATOM 191 CG1 VAL C 26 31.762 -30.021 11.388 1.00130.50 ATOM 192 CG2 VAL C 26 29.347 -30.315 12.006 1.00130.50 ATOM 193 N TYR C 27 32.652 -28.507 14.784 1.00130.50 ATOM 194 CA TYR C 27 33.951 -28.043 15.280 1.00130.50 ATOM 195 C TYR C 27 34.534 -29.056 16.240 1.00130.50 ATOM 196 O TYR C 27 35.747 -29.262 16.281 1.00130.50 ATOM 197 CB TYR C 27 33.814 -26.706 15.995 1.00130.50 ATOM 198 CG TYR C 27 35.126 -26.007 16.286 1.00130.50 ATOM 199 CD1 TYR C 27 35.823 -25.344 15.273 1.00130.50 ATOM 200 CD2 TYR C 27 35.657 -25.982 17.575 1.00130.50 ATOM 201 CE1 TYR C 27 37.018 -24.683 15.531 1.00130.50 ATOM 202 CE2 TYR C 27 36.857 -25.322 17.845 1.00130.50 ATOM 203 CZ TYR C 27 37.530 -24.674 16.813 1.00130.50 ATOM 204 OH TYR C 27 38.715 -24.014 17.048 1.00130.50 ATOM 205 N ALA C 28 33.651 -29.672 17.020 1.00130.50 ATOM 206 CA ALA C 28 34.021 -30.781 17.883 1.00130.50 ATOM 207 C ALA C 28 34.521 -31.955 17.039 1.00130.50 ATOM 208 O ALA C 28 35.672 -32.380 17.175 1.00130.50 ATOM 209 CB ALA C 28 32.832 -31.199 18.756 1.00130.50 ATOM 210 N VAL C 29 33.659 -32.438 16.143 1.00130.50 ATOM 211 CA VAL C 29 33.935 -33.616 15.320 1.00130.50 ATOM 212 C VAL C 29 35.178 -33.439 14.449 1.00130.50 ATOM 213 O VAL C 29 35.821 -34.420 14.074 1.00130.50 ATOM 214 CB VAL C 29 32.701 -34.018 14.466 1.00130.50 ATOM 215 CG1 VAL C 29 33.058 -35.086 13.436 1.00130.50 ATOM 216 CG2 VAL C 29 31.578 -34.528 15.368 1.00130.50 ATOM 217 N PHE C 30 35.523 -32.195 14.140 1.00130.50 ATOM 218 CA PHE C 30 36.749 -31.936 13.408 1.00130.50 ATOM 219 C PHE C 30 37.990 -32.315 14.218 1.00130.50 ATOM 220 O PHE C 30 38.933 -32.891 13.677 1.00130.50 ATOM 221 CB PHE C 30 36.831 -30.479 12.971 1.00130.50 ATOM 222 CG PHE C 30 38.161 -30.104 12.394 1.00130.50 ATOM 223 CD1 PHE C 30 38.567 -30.615 11.163 1.00130.50 ATOM 224 CD2 PHE C 30 39.016 -29.252 13.088 1.00130.50 ATOM 225 CE1 PHE C 30 39.803 -30.277 10.626 1.00130.50 ATOM 226 CE2 PHE C 30 40.258 -28.904 12.563 1.00130.50 ATOM 227 CZ PHE C 30 40.654 -29.419 11.330 1.00130.50 ATOM 228 N PHE C 31 37.983 -31.991 15.509 1.00130.50 ATOM 229 CA PHE C 31 39.120 -32.291 16.383 1.00130.50 ATOM 230 C PHE C 31 39.223 -33.765 16.776 1.00130.50 ATOM 231 O PHE C 31 40.329 -34.299 16.926 1.00130.50 ATOM 232 CB PHE C 31 39.111 -31.390 17.621 1.00130.50 ATOM 233 CG PHE C 31 39.743 -30.048 17.386 1.00130.50 ATOM 234 CD1 PHE C 31 41.133 -29.914 17.363 1.00130.50 ATOM 235 CD2 PHE C 31 38.958 -28.920 17.169 1.00130.50 ATOM 236 CE1 PHE C 31 41.736 -28.675 17.133 1.00130.50 ATOM 237 CE2 PHE C 31 39.551 -27.674 16.940 1.00130.50 ATOM 238 CZ PHE C 31 40.945 -27.554 16.923 1.00130.50 ATOM 239 N ALA C 32 38.068 -34.412 16.927 1.00130.50 ATOM 240 CA ALA C 32 37.981 -35.841 17.262 1.00130.50 ATOM 241 C ALA C 32 38.522 -36.762 16.164 1.00130.50 ATOM 242 O ALA C 32 38.906 -37.898 16.439 1.00130.50 ATOM 243 CB ALA C 32 36.542 -36.220 17.605 1.00130.50 ATOM 244 N ARG C 33 38.530 -36.276 14.927 1.00130.50 ATOM 245 CA ARG C 33 39.102 -37.015 13.808 1.00130.50 ATOM 246 C ARG C 33 40.488 -36.486 13.461 1.00130.50 ATOM 247 O ARG C 33 41.076 -36.884 12.451 1.00130.50 ATOM 248 CB ARG C 33 38.202 -36.919 12.584 1.00130.50 ATOM 249 CG ARG C 33 36.856 -37.579 12.727 1.00130.50 ATOM 250 CD ARG C 33 36.079 -37.371 11.451 1.00130.50 ATOM 251 NE ARG C 33 34.684 -37.776 11.574 1.00130.50 ATOM 252 CZ ARG C 33 33.772 -37.605 10.621 1.00130.50 ATOM 253 NH1 ARG C 33 32.519 -38.005 10.821 1.00130.50 ATOM 254 NH2 ARG C 33 34.110 -37.033 9.467 1.00130.50 ATOM 255 N GLY C 34 41.001 -35.588 14.300 1.00130.50 ATOM 256 CA GLY C 34 42.338 -35.025 14.122 1.00130.50 ATOM 257 C GLY C 34 43.440 -35.996 14.521 1.00130.50 ATOM 258 O GLY C 34 43.433 -36.525 15.643 1.00130.50 ATOM 259 OXT GLY C 34 44.364 -36.282 13.743 1.00130.50 TER