HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 31-DEC-69 3WQS TITLE Crystal structure of pfdxr complexed with inhibitor-126 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, COMPND 3 CHAIN: B; COMPND 4 EC: 1.1.1.267; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.35 ANGSTORMS DBREF 3WQS B 1 488 UNP O96693 DXR_PLAFX 1 488 SEQRES 1 B 30 SER GLU ASN SER GLU ASP LEU MET LYS GLN ILE LEU GLN SEQRES 2 B 30 ILE HIS SER TRP ALA LYS ASP LYS ALA THR ASP ILE TYR SEQRES 3 B 30 ASN LYS HIS ASN ATOM 1 N SER B 457 19.642 -28.353 5.470 1.00 59.65 ATOM 2 CA SER B 457 18.337 -28.207 6.109 1.00 61.23 ATOM 3 C SER B 457 17.315 -27.539 5.202 1.00 62.40 ATOM 4 O SER B 457 17.653 -26.757 4.304 1.00 62.44 ATOM 5 CB SER B 457 18.455 -27.438 7.410 1.00 61.01 ATOM 6 OG SER B 457 19.208 -28.171 8.345 1.00 60.50 ATOM 7 N GLU B 458 16.057 -27.853 5.472 1.00 63.80 ATOM 8 CA GLU B 458 14.969 -27.634 4.530 1.00 65.25 ATOM 9 C GLU B 458 14.277 -26.314 4.825 1.00 65.08 ATOM 10 O GLU B 458 13.949 -25.559 3.908 1.00 65.47 ATOM 11 CB GLU B 458 13.968 -28.803 4.624 1.00 66.15 ATOM 12 CG GLU B 458 14.577 -30.223 4.392 1.00 68.98 ATOM 13 CD GLU B 458 15.543 -30.696 5.502 1.00 72.05 ATOM 14 OE1 GLU B 458 15.350 -30.302 6.685 1.00 72.86 ATOM 15 OE2 GLU B 458 16.490 -31.475 5.183 1.00 73.25 ATOM 16 N ASN B 459 14.066 -26.052 6.111 1.00 64.72 ATOM 17 CA ASN B 459 13.473 -24.804 6.561 1.00 65.15 ATOM 18 C ASN B 459 14.550 -23.857 7.056 1.00 64.86 ATOM 19 O ASN B 459 15.603 -24.284 7.566 1.00 64.48 ATOM 20 CB ASN B 459 12.461 -25.047 7.687 1.00 65.20 ATOM 21 CG ASN B 459 13.093 -25.735 8.878 1.00 66.06 ATOM 22 OD1 ASN B 459 13.609 -26.848 8.752 1.00 66.67 ATOM 23 ND2 ASN B 459 13.093 -25.066 10.032 1.00 66.11 ATOM 24 N SER B 460 14.241 -22.570 6.948 1.00 64.72 ATOM 25 CA SER B 460 15.177 -21.509 7.245 1.00 64.46 ATOM 26 C SER B 460 15.739 -21.594 8.668 1.00 63.86 ATOM 27 O SER B 460 16.956 -21.504 8.858 1.00 63.85 ATOM 28 CB SER B 460 14.523 -20.153 6.975 1.00 64.83 ATOM 29 OG SER B 460 13.933 -19.633 8.151 1.00 67.39 ATOM 30 N GLU B 461 14.874 -21.799 9.657 1.00 62.91 ATOM 31 CA GLU B 461 15.326 -21.824 11.039 1.00 62.51 ATOM 32 C GLU B 461 16.374 -22.925 11.295 1.00 61.45 ATOM 33 O GLU B 461 17.380 -22.692 11.991 1.00 61.02 ATOM 34 CB GLU B 461 14.133 -21.959 11.988 1.00 63.43 ATOM 35 CG GLU B 461 14.457 -21.759 13.490 1.00 66.46 ATOM 36 CD GLU B 461 13.602 -22.658 14.411 1.00 73.03 ATOM 37 OE1 GLU B 461 12.372 -22.805 14.158 1.00 74.94 ATOM 38 OE2 GLU B 461 14.158 -23.228 15.391 1.00 74.37 ATOM 39 N ASP B 462 16.142 -24.114 10.736 1.00 59.82 ATOM 40 CA ASP B 462 17.088 -25.222 10.903 1.00 58.73 ATOM 41 C ASP B 462 18.400 -24.974 10.154 1.00 57.04 ATOM 42 O ASP B 462 19.476 -25.289 10.657 1.00 56.31 ATOM 43 CB ASP B 462 16.486 -26.556 10.451 1.00 58.88 ATOM 44 CG ASP B 462 15.519 -27.139 11.460 1.00 60.23 ATOM 45 OD1 ASP B 462 15.829 -27.178 12.679 1.00 62.09 ATOM 46 OD2 ASP B 462 14.440 -27.572 11.021 1.00 60.80 ATOM 47 N LEU B 463 18.300 -24.411 8.955 1.00 55.81 ATOM 48 CA LEU B 463 19.492 -24.087 8.163 1.00 54.83 ATOM 49 C LEU B 463 20.426 -23.151 8.963 1.00 54.49 ATOM 50 O LEU B 463 21.620 -23.434 9.128 1.00 53.92 ATOM 51 CB LEU B 463 19.100 -23.521 6.789 1.00 54.42 ATOM 52 CG LEU B 463 20.208 -23.207 5.773 1.00 53.32 ATOM 53 CD1 LEU B 463 21.223 -24.360 5.636 1.00 51.72 ATOM 54 CD2 LEU B 463 19.646 -22.805 4.416 1.00 50.30 ATOM 55 N MET B 464 19.847 -22.094 9.526 1.00 54.03 ATOM 56 CA MET B 464 20.578 -21.140 10.348 1.00 53.87 ATOM 57 C MET B 464 21.370 -21.852 11.454 1.00 53.71 ATOM 58 O MET B 464 22.587 -21.630 11.587 1.00 53.34 ATOM 59 CB MET B 464 19.622 -20.063 10.893 1.00 54.16 ATOM 60 CG MET B 464 20.269 -18.857 11.630 1.00 56.29 ATOM 61 SD MET B 464 21.862 -18.195 11.017 1.00 59.59 ATOM 62 CE MET B 464 21.428 -17.460 9.451 1.00 58.03 ATOM 63 N LYS B 465 20.688 -22.719 12.219 1.00 53.27 ATOM 64 CA LYS B 465 21.300 -23.476 13.329 1.00 52.38 ATOM 65 C LYS B 465 22.484 -24.303 12.825 1.00 50.89 ATOM 66 O LYS B 465 23.565 -24.357 13.448 1.00 50.08 ATOM 67 CB LYS B 465 20.273 -24.456 13.922 1.00 53.63 ATOM 68 CG LYS B 465 19.179 -23.851 14.782 1.00 56.17 ATOM 69 CD LYS B 465 18.141 -24.906 15.108 1.00 59.15 ATOM 70 CE LYS B 465 17.182 -24.434 16.189 1.00 62.49 ATOM 71 NZ LYS B 465 16.532 -23.129 15.848 1.00 62.76 ATOM 72 N GLN B 466 22.240 -24.953 11.685 1.00 48.94 ATOM 73 CA GLN B 466 23.210 -25.794 11.034 1.00 47.94 ATOM 74 C GLN B 466 24.454 -24.952 10.629 1.00 47.16 ATOM 75 O GLN B 466 25.585 -25.328 10.943 1.00 47.47 ATOM 76 CB GLN B 466 22.544 -26.497 9.841 1.00 47.66 ATOM 77 CG GLN B 466 23.472 -27.392 9.095 1.00 47.75 ATOM 78 CD GLN B 466 22.777 -28.346 8.138 1.00 50.18 ATOM 79 OE1 GLN B 466 21.694 -28.059 7.571 1.00 50.89 ATOM 80 NE2 GLN B 466 23.418 -29.494 7.929 1.00 47.25 ATOM 81 N ILE B 467 24.231 -23.812 9.977 1.00 45.80 ATOM 82 CA ILE B 467 25.298 -22.833 9.699 1.00 45.61 ATOM 83 C ILE B 467 26.072 -22.447 10.979 1.00 45.67 ATOM 84 O ILE B 467 27.313 -22.478 11.016 1.00 45.32 ATOM 85 CB ILE B 467 24.731 -21.579 8.963 1.00 45.64 ATOM 86 CG1 ILE B 467 24.166 -21.989 7.586 1.00 45.03 ATOM 87 CG2 ILE B 467 25.803 -20.480 8.848 1.00 45.81 ATOM 88 CD1 ILE B 467 23.522 -20.876 6.747 1.00 45.68 ATOM 89 N LEU B 468 25.340 -22.142 12.046 1.00 45.80 ATOM 90 CA LEU B 468 25.968 -21.785 13.320 1.00 45.50 ATOM 91 C LEU B 468 26.810 -22.923 13.910 1.00 45.66 ATOM 92 O LEU B 468 27.929 -22.683 14.407 1.00 46.07 ATOM 93 CB LEU B 468 24.913 -21.304 14.314 1.00 45.08 ATOM 94 CG LEU B 468 24.079 -20.120 13.809 1.00 46.53 ATOM 95 CD1 LEU B 468 22.751 -20.036 14.564 1.00 47.26 ATOM 96 CD2 LEU B 468 24.853 -18.774 13.911 1.00 43.88 ATOM 97 N GLN B 469 26.301 -24.158 13.835 1.00 45.37 ATOM 98 CA GLN B 469 27.009 -25.301 14.437 1.00 45.10 ATOM 99 C GLN B 469 28.275 -25.582 13.645 1.00 44.10 ATOM 100 O GLN B 469 29.336 -25.883 14.217 1.00 43.81 ATOM 101 CB GLN B 469 26.094 -26.555 14.526 1.00 46.08 ATOM 102 CG GLN B 469 26.770 -27.825 15.120 1.00 47.79 ATOM 103 CD GLN B 469 27.617 -28.583 14.100 1.00 49.83 ATOM 104 OE1 GLN B 469 27.195 -28.780 12.959 1.00 54.22 ATOM 105 NE2 GLN B 469 28.817 -29.010 14.506 1.00 48.15 ATOM 106 N ILE B 470 28.175 -25.451 12.324 1.00 43.71 ATOM 107 CA ILE B 470 29.318 -25.747 11.455 1.00 43.63 ATOM 108 C ILE B 470 30.388 -24.663 11.604 1.00 43.87 ATOM 109 O ILE B 470 31.595 -24.959 11.711 1.00 44.52 ATOM 110 CB ILE B 470 28.873 -25.962 9.990 1.00 43.26 ATOM 111 CG1 ILE B 470 28.103 -27.285 9.886 1.00 42.91 ATOM 112 CG2 ILE B 470 30.077 -25.985 9.069 1.00 43.23 ATOM 113 CD1 ILE B 470 27.270 -27.466 8.653 1.00 40.33 ATOM 114 N HIS B 471 29.931 -23.416 11.680 1.00 44.40 ATOM 115 CA HIS B 471 30.814 -22.266 11.924 1.00 45.24 ATOM 116 C HIS B 471 31.617 -22.432 13.208 1.00 44.41 ATOM 117 O HIS B 471 32.852 -22.416 13.160 1.00 43.92 ATOM 118 CB HIS B 471 30.004 -20.960 11.883 1.00 46.40 ATOM 119 CG HIS B 471 30.803 -19.734 12.187 1.00 50.71 ATOM 120 ND1 HIS B 471 31.660 -19.157 11.272 1.00 54.15 ATOM 121 CD2 HIS B 471 30.879 -18.975 13.309 1.00 53.62 ATOM 122 CE1 HIS B 471 32.235 -18.099 11.818 1.00 54.98 ATOM 123 NE2 HIS B 471 31.773 -17.964 13.051 1.00 56.08 ATOM 124 N SER B 472 30.944 -22.679 14.345 1.00 44.34 ATOM 125 CA SER B 472 31.671 -22.890 15.631 1.00 43.48 ATOM 126 C SER B 472 32.588 -24.084 15.630 1.00 42.55 ATOM 127 O SER B 472 33.648 -24.041 16.268 1.00 43.11 ATOM 128 CB SER B 472 30.719 -23.007 16.812 1.00 44.03 ATOM 129 OG SER B 472 29.521 -22.308 16.502 1.00 47.82 ATOM 130 N TRP B 473 32.194 -25.145 14.919 1.00 41.36 ATOM 131 CA TRP B 473 32.970 -26.388 14.902 1.00 40.39 ATOM 132 C TRP B 473 34.285 -26.152 14.181 1.00 40.72 ATOM 133 O TRP B 473 35.346 -26.621 14.635 1.00 41.14 ATOM 134 CB TRP B 473 32.230 -27.591 14.215 1.00 39.12 ATOM 135 CG TRP B 473 33.260 -28.598 13.817 1.00 36.20 ATOM 136 CD1 TRP B 473 33.871 -29.487 14.645 1.00 37.57 ATOM 137 CD2 TRP B 473 33.924 -28.722 12.547 1.00 34.44 ATOM 138 NE1 TRP B 473 34.830 -30.200 13.967 1.00 36.81 ATOM 139 CE2 TRP B 473 34.882 -29.749 12.674 1.00 35.30 ATOM 140 CE3 TRP B 473 33.784 -28.086 11.310 1.00 34.47 ATOM 141 CZ2 TRP B 473 35.723 -30.139 11.608 1.00 33.90 ATOM 142 CZ3 TRP B 473 34.613 -28.472 10.258 1.00 31.03 ATOM 143 CH2 TRP B 473 35.573 -29.490 10.419 1.00 30.89 ATOM 144 N ALA B 474 34.193 -25.493 13.021 1.00 41.32 ATOM 145 CA ALA B 474 35.371 -25.175 12.183 1.00 41.59 ATOM 146 C ALA B 474 36.327 -24.228 12.917 1.00 41.71 ATOM 147 O ALA B 474 37.558 -24.398 12.894 1.00 41.71 ATOM 148 CB ALA B 474 34.924 -24.588 10.831 1.00 41.45 ATOM 149 N LYS B 475 35.756 -23.260 13.618 1.00 42.74 ATOM 150 CA LYS B 475 36.552 -22.413 14.524 1.00 43.84 ATOM 151 C LYS B 475 37.304 -23.240 15.562 1.00 44.16 ATOM 152 O LYS B 475 38.536 -23.135 15.638 1.00 44.28 ATOM 153 CB LYS B 475 35.664 -21.377 15.188 1.00 44.23 ATOM 154 CG LYS B 475 35.171 -20.313 14.212 1.00 46.76 ATOM 155 CD LYS B 475 34.073 -19.470 14.863 1.00 54.36 ATOM 156 CE LYS B 475 34.656 -18.346 15.712 1.00 58.27 ATOM 157 NZ LYS B 475 35.273 -17.312 14.803 1.00 61.61 ATOM 158 N ASP B 476 36.578 -24.105 16.300 1.00 44.47 ATOM 159 CA ASP B 476 37.176 -24.953 17.347 1.00 44.84 ATOM 160 C ASP B 476 38.254 -25.828 16.772 1.00 45.10 ATOM 161 O ASP B 476 39.333 -25.965 17.361 1.00 45.08 ATOM 162 CB ASP B 476 36.142 -25.867 18.018 1.00 45.49 ATOM 163 CG ASP B 476 35.058 -25.107 18.752 1.00 46.65 ATOM 164 OD1 ASP B 476 35.319 -23.963 19.189 1.00 50.28 ATOM 165 OD2 ASP B 476 33.933 -25.648 18.882 1.00 45.99 ATOM 166 N LYS B 477 37.955 -26.422 15.607 1.00 45.27 ATOM 167 CA LYS B 477 38.872 -27.328 14.928 1.00 44.75 ATOM 168 C LYS B 477 40.137 -26.589 14.499 1.00 45.92 ATOM 169 O LYS B 477 41.253 -27.160 14.500 1.00 46.79 ATOM 170 CB LYS B 477 38.171 -27.908 13.695 1.00 44.85 ATOM 171 CG LYS B 477 39.001 -28.827 12.846 1.00 42.93 ATOM 172 CD LYS B 477 39.133 -30.204 13.463 1.00 43.19 ATOM 173 CE LYS B 477 40.225 -30.962 12.724 1.00 44.42 ATOM 174 NZ LYS B 477 40.402 -32.338 13.182 1.00 44.14 ATOM 175 N ALA B 478 39.969 -25.333 14.091 1.00 46.23 ATOM 176 CA ALA B 478 41.126 -24.504 13.708 1.00 47.10 ATOM 177 C ALA B 478 42.012 -24.205 14.919 1.00 47.28 ATOM 178 O ALA B 478 43.199 -24.474 14.879 1.00 46.92 ATOM 179 CB ALA B 478 40.682 -23.202 12.995 1.00 46.07 ATOM 180 N THR B 479 41.421 -23.651 15.979 1.00 48.91 ATOM 181 CA THR B 479 42.094 -23.455 17.274 1.00 50.37 ATOM 182 C THR B 479 42.809 -24.748 17.687 1.00 52.31 ATOM 183 O THR B 479 43.958 -24.759 18.176 1.00 52.57 ATOM 184 CB THR B 479 41.058 -23.129 18.361 1.00 50.43 ATOM 185 OG1 THR B 479 40.344 -21.932 18.018 1.00 49.07 ATOM 186 CG2 THR B 479 41.727 -22.970 19.726 1.00 51.11 ATOM 187 N ASP B 480 42.116 -25.852 17.447 1.00 53.94 ATOM 188 CA ASP B 480 42.552 -27.139 17.892 1.00 55.73 ATOM 189 C ASP B 480 43.823 -27.586 17.180 1.00 56.18 ATOM 190 O ASP B 480 44.748 -28.100 17.810 1.00 55.84 ATOM 191 CB ASP B 480 41.412 -28.112 17.653 1.00 56.68 ATOM 192 CG ASP B 480 41.376 -29.185 18.657 1.00 58.95 ATOM 193 OD1 ASP B 480 40.528 -29.081 19.572 1.00 61.95 ATOM 194 OD2 ASP B 480 42.215 -30.109 18.540 1.00 61.80 ATOM 195 N ILE B 481 43.871 -27.375 15.866 1.00 57.31 ATOM 196 CA ILE B 481 45.048 -27.733 15.067 1.00 58.54 ATOM 197 C ILE B 481 46.282 -26.935 15.506 1.00 59.93 ATOM 198 O ILE B 481 47.409 -27.452 15.518 1.00 59.26 ATOM 199 CB ILE B 481 44.789 -27.527 13.546 1.00 58.43 ATOM 200 CG1 ILE B 481 44.007 -28.712 12.973 1.00 57.29 ATOM 201 CG2 ILE B 481 46.102 -27.337 12.780 1.00 56.95 ATOM 202 CD1 ILE B 481 43.114 -28.333 11.815 1.00 55.44 ATOM 203 N TYR B 482 46.039 -25.669 15.847 1.00 61.99 ATOM 204 CA TYR B 482 47.070 -24.771 16.352 1.00 64.15 ATOM 205 C TYR B 482 47.557 -25.261 17.715 1.00 65.14 ATOM 206 O TYR B 482 48.746 -25.418 17.908 1.00 65.00 ATOM 207 CB TYR B 482 46.535 -23.330 16.430 1.00 63.96 ATOM 208 CG TYR B 482 47.326 -22.400 17.336 1.00 64.86 ATOM 209 CD1 TYR B 482 48.605 -21.951 16.972 1.00 63.57 ATOM 210 CD2 TYR B 482 46.784 -21.958 18.557 1.00 65.21 ATOM 211 CE1 TYR B 482 49.329 -21.099 17.806 1.00 64.86 ATOM 212 CE2 TYR B 482 47.501 -21.101 19.401 1.00 64.81 ATOM 213 CZ TYR B 482 48.771 -20.675 19.018 1.00 65.49 ATOM 214 OH TYR B 482 49.480 -19.826 19.849 1.00 65.84 ATOM 215 N ASN B 483 46.631 -25.515 18.638 1.00 66.99 ATOM 216 CA ASN B 483 46.999 -26.050 19.945 1.00 68.84 ATOM 217 C ASN B 483 47.822 -27.323 19.834 1.00 70.83 ATOM 218 O ASN B 483 48.886 -27.425 20.446 1.00 71.51 ATOM 219 CB ASN B 483 45.770 -26.295 20.812 1.00 68.23 ATOM 220 CG ASN B 483 45.162 -25.020 21.330 1.00 67.01 ATOM 221 OD1 ASN B 483 45.796 -23.974 21.324 1.00 67.05 ATOM 222 ND2 ASN B 483 43.927 -25.099 21.791 1.00 65.04 ATOM 223 N LYS B 484 47.353 -28.275 19.031 1.00 73.11 ATOM 224 CA LYS B 484 48.011 -29.576 18.919 1.00 75.46 ATOM 225 C LYS B 484 49.352 -29.475 18.199 1.00 76.87 ATOM 226 O LYS B 484 49.851 -30.468 17.663 1.00 77.44 ATOM 227 CB LYS B 484 47.099 -30.599 18.219 1.00 75.49 ATOM 228 CG LYS B 484 45.886 -31.064 19.053 1.00 76.90 ATOM 229 CD LYS B 484 45.055 -32.172 18.347 1.00 79.61 ATOM 230 CE LYS B 484 44.592 -31.761 16.918 1.00 81.63 ATOM 231 NZ LYS B 484 43.483 -32.586 16.332 1.00 81.41 ATOM 232 N HIS B 485 49.939 -28.280 18.198 1.00 78.55 ATOM 233 CA HIS B 485 51.171 -28.033 17.446 1.00 80.37 ATOM 234 C HIS B 485 52.135 -27.032 18.118 1.00 80.93 ATOM 235 O HIS B 485 52.913 -26.361 17.432 1.00 80.84 ATOM 236 CB HIS B 485 50.824 -27.585 16.018 1.00 80.74 ATOM 237 CG HIS B 485 51.830 -28.002 14.987 1.00 82.99 ATOM 238 ND1 HIS B 485 52.894 -27.205 14.617 1.00 84.45 ATOM 239 CD2 HIS B 485 51.928 -29.130 14.240 1.00 85.28 ATOM 240 CE1 HIS B 485 53.608 -27.825 13.692 1.00 85.73 ATOM 241 NE2 HIS B 485 53.042 -28.994 13.443 1.00 86.48 ATOM 242 N ASN B 486 52.073 -26.937 19.453 1.00 81.74 ATOM 243 CA ASN B 486 53.062 -26.184 20.273 1.00 82.16 ATOM 244 C ASN B 486 52.905 -26.369 21.797 1.00 82.30 ATOM 245 O ASN B 486 51.991 -27.059 22.277 1.00 82.18 ATOM 246 CB ASN B 486 53.078 -24.685 19.923 1.00 82.13 ATOM 247 CG ASN B 486 51.725 -24.028 20.107 1.00 82.27 ATOM 248 OD1 ASN B 486 50.766 -24.354 19.418 1.00 81.72 ATOM 249 ND2 ASN B 486 51.646 -23.092 21.039 1.00 82.38 TER