HEADER HYDROLASE/HYDROLASE 20-NOV-11 4A8A TITLE Asymmetric cryo-EM reconstruction of E. coli DegQ 12-mer in complex TITLE 2 with lysozyme COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L; COMPND 4 MUTATION: YES; COMPND 5 EC: 3.4.21.107; COMPND 6 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA E 35 REMARK 465 SER E 36 REMARK 465 GLN E 37 REMARK 465 GLY E 38 REMARK 465 GLN E 39 REMARK 465 LYS E 40 REMARK 465 ILE E 41 REMARK 465 PRO E 42 REMARK 465 GLU E 43 REMARK 465 GLU E 44 REMARK 465 PHE E 45 REMARK 465 LYS E 46 REMARK 465 LYS E 47 REMARK 465 PHE E 48 REMARK 465 PHE E 49 REMARK 465 GLY E 50 REMARK 465 ASP E 51 REMARK 465 ASP E 52 REMARK 465 LEU E 53 REMARK 465 PRO E 54 REMARK 465 ASP E 55 REMARK 465 GLN E 56 REMARK 465 PRO E 57 DBREF 4A8A E 1 428 UNP P39099 DEGQ_ECOLI 28 455 SEQRES 1 E 225 PRO LEU PRO SER LEU ALA PRO MET LEU GLU LYS VAL LEU SEQRES 2 E 225 PRO ALA VAL VAL SER VAL ARG VAL GLU GLY THR ALA SER SEQRES 3 E 225 GLN GLY GLN LYS ILE PRO GLU GLU PHE LYS LYS PHE PHE SEQRES 4 E 225 GLY ASP ASP LEU PRO ASP GLN PRO ALA GLN PRO PHE GLU SEQRES 5 E 225 GLY LEU GLY SER GLY VAL ILE ILE ASN ALA SER LYS GLY SEQRES 6 E 225 TYR VAL LEU THR ASN ASN HIS VAL ILE ASN GLN ALA GLN SEQRES 7 E 225 LYS ILE SER ILE GLN LEU ASN ASP GLY ARG GLU PHE ASP SEQRES 8 E 225 ALA LYS LEU ILE GLY SER ASP ASP GLN SER ASP ILE ALA SEQRES 9 E 225 LEU LEU GLN ILE GLN ASN PRO SER LYS LEU THR GLN ILE SEQRES 10 E 225 ALA ILE ALA ASP SER ASP LYS LEU ARG VAL GLY ASP PHE SEQRES 11 E 225 ALA VAL ALA VAL GLY ASN PRO PHE GLY LEU GLY GLN THR SEQRES 12 E 225 ALA THR SER GLY ILE VAL SER ALA LEU GLY ARG SER GLY SEQRES 13 E 225 LEU ASN LEU GLU GLY LEU GLU ASN PHE ILE GLN THR ASP SEQRES 14 E 225 ALA SER ILE ASN ARG GLY ASN ALA GLY GLY ALA LEU LEU SEQRES 15 E 225 ASN LEU ASN GLY GLU LEU ILE GLY ILE ASN THR ALA ILE SEQRES 16 E 225 LEU ALA PRO GLY GLY GLY SER VAL GLY ILE GLY PHE ALA SEQRES 17 E 225 ILE PRO SER ASN MET ALA ARG THR LEU ALA GLN GLN LEU SEQRES 18 E 225 ILE ASP PHE GLY ATOM 1 CA PRO E 11 47.698 -46.357 37.686 1.00 52.21 ATOM 2 CA LEU E 12 45.032 -47.413 35.298 1.00 92.12 ATOM 3 CA PRO E 13 42.105 -48.962 36.969 1.00254.47 ATOM 4 CA SER E 14 41.537 -49.419 34.189 1.00197.67 ATOM 5 CA LEU E 15 37.933 -48.833 33.205 1.00114.77 ATOM 6 CA ALA E 16 38.200 -51.238 30.297 1.00 44.52 ATOM 7 CA PRO E 17 38.572 -54.393 32.278 1.00 73.31 ATOM 8 CA MET E 18 35.396 -53.589 34.140 1.00125.81 ATOM 9 CA LEU E 19 33.625 -52.584 30.968 1.00 57.81 ATOM 10 CA GLU E 20 34.455 -55.674 29.027 1.00 72.86 ATOM 11 CA LYS E 21 32.416 -57.891 31.262 1.00 95.75 ATOM 12 CA VAL E 22 29.556 -55.448 31.828 1.00 81.41 ATOM 13 CA LEU E 23 28.992 -53.990 28.392 1.00 80.95 ATOM 14 CA PRO E 24 27.126 -56.856 26.847 1.00 66.39 ATOM 15 CA ALA E 25 24.477 -56.311 29.497 1.00 33.81 ATOM 16 CA VAL E 26 23.561 -52.918 28.122 1.00 43.48 ATOM 17 CA VAL E 27 21.455 -53.005 25.032 1.00 96.61 ATOM 18 CA SER E 28 20.029 -50.662 22.447 1.00 35.37 ATOM 19 CA VAL E 29 16.290 -50.515 22.073 1.00 33.66 ATOM 20 CA ARG E 30 14.693 -49.900 18.722 1.00 86.05 ATOM 21 CA VAL E 31 11.091 -48.891 18.434 1.00 43.69 ATOM 22 CA GLU E 32 8.585 -48.382 15.660 1.00 73.90 ATOM 23 CA GLY E 33 5.047 -47.180 15.900 1.00 30.29 ATOM 24 CA THR E 34 2.584 -44.423 15.262 1.00 75.70 ATOM 25 CA ALA E 58 0.191 -41.586 12.759 1.00 24.06 ATOM 26 CA GLN E 59 3.115 -41.613 10.417 1.00103.08 ATOM 27 CA PRO E 60 5.595 -44.294 11.089 1.00 64.70 ATOM 28 CA PHE E 61 8.500 -43.240 13.216 1.00 54.21 ATOM 29 CA GLU E 62 11.547 -44.979 14.503 1.00 26.61 ATOM 30 CA GLY E 63 13.051 -44.182 17.842 1.00 17.66 ATOM 31 CA LEU E 64 16.234 -45.313 19.462 1.00 40.99 ATOM 32 CA GLY E 65 16.955 -45.782 23.125 1.00 21.08 ATOM 33 CA SER E 66 18.827 -48.109 25.414 1.00 77.59 ATOM 34 CA GLY E 67 18.024 -50.681 28.027 1.00 18.99 ATOM 35 CA VAL E 68 19.713 -52.929 30.522 1.00109.48 ATOM 36 CA ILE E 69 19.359 -56.664 30.840 1.00 50.01 ATOM 37 CA ILE E 70 18.277 -57.374 34.383 1.00 90.84 ATOM 38 CA ASN E 71 17.692 -61.060 33.992 1.00147.58 ATOM 39 CA ALA E 72 19.610 -63.019 31.401 1.00 38.54 ATOM 40 CA SER E 73 17.589 -66.175 31.653 1.00 37.96 ATOM 41 CA LYS E 74 14.227 -64.508 31.441 1.00 91.05 ATOM 42 CA GLY E 75 15.445 -61.832 29.105 1.00 27.50 ATOM 43 CA TYR E 76 14.071 -58.951 31.122 1.00 79.97 ATOM 44 CA VAL E 77 15.308 -55.559 30.033 1.00 40.16 ATOM 45 CA LEU E 78 14.721 -52.324 31.898 1.00 57.74 ATOM 46 CA THR E 79 14.097 -49.173 29.949 1.00 45.28 ATOM 47 CA ASN E 80 12.453 -45.818 30.252 1.00 56.90 ATOM 48 CA ASN E 81 8.750 -45.743 29.659 1.00 46.42 ATOM 49 CA HIS E 82 9.064 -42.813 27.330 1.00 51.57 ATOM 50 CA VAL E 83 11.291 -44.758 25.027 1.00 41.53 ATOM 51 CA ILE E 84 8.720 -47.566 24.825 1.00179.81 ATOM 52 CA ASN E 85 5.514 -45.570 25.046 1.00 74.81 ATOM 53 CA GLN E 86 4.593 -45.159 21.368 1.00128.09 ATOM 54 CA ALA E 87 6.224 -48.364 20.204 1.00 69.39 ATOM 55 CA GLN E 88 4.001 -50.714 18.298 1.00 59.04 ATOM 56 CA LYS E 89 6.933 -53.055 17.995 1.00 39.66 ATOM 57 CA ILE E 90 10.228 -53.167 19.792 1.00177.66 ATOM 58 CA SER E 91 13.510 -54.763 19.000 1.00 36.79 ATOM 59 CA ILE E 92 16.580 -55.209 21.131 1.00100.76 ATOM 60 CA GLN E 93 20.090 -55.221 19.748 1.00 65.15 ATOM 61 CA LEU E 94 23.116 -56.582 21.529 1.00 51.38 ATOM 62 CA ASN E 95 26.549 -55.069 21.215 1.00 41.00 ATOM 63 CA ASP E 96 27.538 -58.225 19.384 1.00 66.24 ATOM 64 CA GLY E 97 25.055 -57.336 16.691 1.00 35.52 ATOM 65 CA ARG E 98 22.488 -59.980 17.461 1.00100.61 ATOM 66 CA GLU E 99 18.985 -58.662 17.612 1.00109.31 ATOM 67 CA PHE E 100 15.771 -59.886 19.136 1.00 48.32 ATOM 68 CA ASP E 101 12.161 -58.879 19.432 1.00 29.25 ATOM 69 CA ALA E 102 10.744 -57.761 22.727 1.00 28.60 ATOM 70 CA LYS E 103 7.349 -57.343 24.296 1.00 56.82 ATOM 71 CA LEU E 104 6.382 -54.816 26.902 1.00 49.76 ATOM 72 CA ILE E 105 5.942 -56.563 30.204 1.00137.12 ATOM 73 CA GLY E 106 4.658 -53.477 31.935 1.00 23.09 ATOM 74 CA SER E 107 5.601 -49.926 32.696 1.00 51.08 ATOM 75 CA ASP E 108 4.525 -46.880 34.588 1.00 96.95 ATOM 76 CA ASP E 109 4.363 -43.221 33.663 1.00 64.49 ATOM 77 CA GLN E 110 5.027 -41.485 36.917 1.00 86.21 ATOM 78 CA SER E 111 8.453 -43.017 37.607 1.00 62.97 ATOM 79 CA ASP E 112 9.063 -43.565 33.890 1.00 76.29 ATOM 80 CA ILE E 113 10.173 -47.187 34.317 1.00 96.88 ATOM 81 CA ALA E 114 9.276 -49.907 31.859 1.00 31.08 ATOM 82 CA LEU E 115 10.104 -53.583 31.680 1.00105.06 ATOM 83 CA LEU E 116 10.562 -55.471 28.443 1.00 51.64 ATOM 84 CA GLN E 117 11.101 -59.126 27.785 1.00 42.10 ATOM 85 CA ILE E 118 13.155 -60.483 24.946 1.00 85.79 ATOM 86 CA GLN E 119 11.683 -63.363 23.083 1.00 92.84 ATOM 87 CA ASN E 120 14.017 -66.325 22.754 1.00 57.06 ATOM 88 CA PRO E 121 16.693 -64.547 24.713 1.00105.36 ATOM 89 CA SER E 122 19.593 -67.044 24.335 1.00195.55 ATOM 90 CA LYS E 123 23.090 -66.416 25.709 1.00 76.84 ATOM 91 CA LEU E 124 22.534 -63.116 27.412 1.00 90.05 ATOM 92 CA THR E 125 24.597 -61.281 29.974 1.00 51.58 ATOM 93 CA GLN E 126 23.014 -59.761 33.041 1.00119.61 ATOM 94 CA ILE E 127 24.069 -56.684 34.928 1.00109.25 ATOM 95 CA ALA E 128 24.361 -56.718 38.700 1.00 30.82 ATOM 96 CA ILE E 129 22.507 -54.078 40.640 1.00100.12 ATOM 97 CA ALA E 130 24.116 -51.978 43.331 1.00 39.89 ATOM 98 CA ASP E 131 22.466 -50.289 46.274 1.00 32.68 ATOM 99 CA SER E 132 21.672 -46.777 45.141 1.00 81.99 ATOM 100 CA ASP E 133 21.136 -45.673 48.702 1.00 30.27 ATOM 101 CA LYS E 134 24.831 -46.166 49.312 1.00 38.00 ATOM 102 CA LEU E 135 25.868 -43.679 46.654 1.00 55.30 ATOM 103 CA ARG E 136 27.419 -40.428 47.771 1.00 98.98 ATOM 104 CA VAL E 137 28.377 -37.391 45.779 1.00 77.70 ATOM 105 CA GLY E 138 31.796 -37.774 44.280 1.00 22.43 ATOM 106 CA ASP E 139 31.394 -41.419 43.438 1.00 30.16 ATOM 107 CA PHE E 140 32.532 -42.396 39.978 1.00 59.86 ATOM 108 CA ALA E 141 29.946 -43.295 37.392 1.00 30.95 ATOM 109 CA VAL E 142 29.952 -44.572 33.841 1.00 33.67 ATOM 110 CA ALA E 143 27.052 -44.177 31.488 1.00 29.59 ATOM 111 CA VAL E 144 26.368 -46.586 28.697 1.00106.97 ATOM 112 CA GLY E 145 23.757 -46.199 26.010 1.00 23.35 ATOM 113 CA ASN E 146 23.388 -45.193 22.425 1.00 65.47 ATOM 114 CA PRO E 147 23.584 -41.535 21.918 1.00147.99 ATOM 115 CA PHE E 148 22.416 -40.363 18.533 1.00 69.24 ATOM 116 CA GLY E 149 22.047 -44.018 17.709 1.00 22.29 ATOM 117 CA LEU E 150 25.760 -44.225 17.091 1.00 84.15 ATOM 118 CA GLY E 151 26.054 -47.543 18.855 1.00 34.27 ATOM 119 CA GLN E 152 27.032 -48.573 22.322 1.00 47.45 ATOM 120 CA THR E 153 28.956 -45.736 23.874 1.00130.56 ATOM 121 CA ALA E 154 30.402 -45.324 27.292 1.00 41.01 ATOM 122 CA THR E 155 30.960 -42.024 29.030 1.00119.94 ATOM 123 CA SER E 156 32.507 -41.304 32.373 1.00 37.31 ATOM 124 CA GLY E 157 31.754 -38.871 35.154 1.00 26.15 ATOM 125 CA ILE E 158 30.964 -38.637 38.844 1.00 56.25 ATOM 126 CA VAL E 159 27.746 -38.475 40.784 1.00123.47 ATOM 127 CA SER E 160 27.017 -34.802 40.953 1.00 49.57 ATOM 128 CA ALA E 161 24.025 -35.021 43.228 1.00 45.98 ATOM 129 CA LEU E 162 21.377 -37.343 44.526 1.00 95.69 ATOM 130 CA GLY E 163 17.814 -37.091 45.637 1.00 31.05 ATOM 131 CA ARG E 164 17.016 -34.364 43.250 1.00 73.22 ATOM 132 CA SER E 165 13.574 -33.321 42.216 1.00 91.30 ATOM 133 CA GLY E 166 11.220 -30.602 41.350 1.00 46.13 ATOM 134 CA LEU E 167 12.555 -30.912 37.834 1.00121.92 ATOM 135 CA ASN E 168 8.947 -31.755 36.966 1.00141.52 ATOM 136 CA LEU E 169 10.296 -34.103 34.373 1.00 51.71 ATOM 137 CA GLU E 170 8.389 -36.960 35.981 1.00118.28 ATOM 138 CA GLY E 171 5.587 -37.496 38.458 1.00 37.35 ATOM 139 CA LEU E 172 7.899 -39.204 40.869 1.00122.79 ATOM 140 CA GLU E 173 11.423 -38.111 40.753 1.00 82.74 ATOM 141 CA ASN E 174 14.595 -38.808 42.641 1.00103.11 ATOM 142 CA PHE E 175 17.193 -38.449 40.077 1.00 91.31 ATOM 143 CA ILE E 176 20.804 -39.234 40.554 1.00133.20 ATOM 144 CA GLN E 177 22.572 -36.375 38.864 1.00 54.13 ATOM 145 CA THR E 178 25.640 -37.149 36.832 1.00113.79 ATOM 146 CA ASP E 179 28.302 -35.293 34.869 1.00 98.99 ATOM 147 CA ALA E 180 28.748 -38.192 32.491 1.00 42.35 ATOM 148 CA SER E 181 27.812 -37.170 29.013 1.00 45.18 ATOM 149 CA ILE E 182 24.260 -38.181 28.386 1.00 93.29 ATOM 150 CA ASN E 183 22.538 -37.330 25.169 1.00 46.30 ATOM 151 CA ARG E 184 19.431 -38.301 23.335 1.00 89.63 ATOM 152 CA GLY E 185 19.385 -42.027 22.826 1.00 21.84 ATOM 153 CA ASN E 186 20.873 -42.492 26.275 1.00 53.21 ATOM 154 CA ALA E 187 17.466 -43.025 27.819 1.00 96.82 ATOM 155 CA GLY E 188 16.938 -46.415 29.327 1.00 26.10 ATOM 156 CA GLY E 189 20.687 -46.822 29.383 1.00 24.95 ATOM 157 CA ALA E 190 22.690 -47.764 32.396 1.00 57.06 ATOM 158 CA LEU E 191 24.733 -45.777 34.838 1.00 81.45 ATOM 159 CA LEU E 192 27.359 -47.975 36.375 1.00117.21 ATOM 160 CA ASN E 193 29.748 -47.751 39.261 1.00 59.85 ATOM 161 CA LEU E 194 33.375 -48.800 39.061 1.00 88.86 ATOM 162 CA ASN E 195 32.252 -52.299 39.911 1.00 47.97 ATOM 163 CA GLY E 196 30.126 -52.312 36.822 1.00 26.27 ATOM 164 CA GLU E 197 27.010 -52.641 38.871 1.00111.52 ATOM 165 CA LEU E 198 23.909 -50.675 37.967 1.00144.53 ATOM 166 CA ILE E 199 23.534 -47.437 39.934 1.00114.22 ATOM 167 CA GLY E 200 20.571 -46.163 37.941 1.00 28.90 ATOM 168 CA ILE E 201 18.894 -45.805 34.569 1.00 52.69 ATOM 169 CA ASN E 202 19.579 -42.612 32.645 1.00 84.18 ATOM 170 CA THR E 203 16.230 -40.889 32.264 1.00 86.24 ATOM 171 CA ALA E 204 16.841 -37.326 31.145 1.00 53.65 ATOM 172 CA ILE E 205 19.075 -34.305 30.776 1.00109.65 ATOM 173 CA LEU E 206 18.841 -30.577 31.239 1.00 52.39 ATOM 174 CA ALA E 207 20.345 -28.904 28.236 1.00 41.58 ATOM 175 CA PRO E 208 19.426 -25.730 26.540 1.00 66.61 ATOM 176 CA GLY E 209 21.194 -26.837 23.380 1.00 28.48 ATOM 177 CA GLY E 210 19.601 -30.220 23.366 1.00 22.21 ATOM 178 CA GLY E 211 23.110 -31.525 23.798 1.00 22.77 ATOM 179 CA SER E 212 24.778 -32.732 26.960 1.00 56.08 ATOM 180 CA VAL E 213 25.476 -29.837 29.303 1.00 60.47 ATOM 181 CA GLY E 214 26.936 -32.174 31.862 1.00 35.47 ATOM 182 CA ILE E 215 23.730 -32.254 33.837 1.00 87.13 ATOM 183 CA GLY E 216 22.095 -35.630 33.503 1.00 21.08 ATOM 184 CA PHE E 217 19.581 -37.429 35.647 1.00 54.72 ATOM 185 CA ALA E 218 18.998 -41.097 36.240 1.00 37.40 ATOM 186 CA ILE E 219 16.520 -43.142 38.186 1.00162.81 ATOM 187 CA PRO E 220 18.296 -44.887 40.931 1.00103.52 ATOM 188 CA SER E 221 18.946 -48.601 40.749 1.00 40.23 ATOM 189 CA ASN E 222 16.992 -49.243 43.850 1.00 57.49 ATOM 190 CA MET E 223 14.371 -47.465 41.946 1.00114.80 ATOM 191 CA ALA E 224 14.375 -49.530 38.847 1.00 51.91 ATOM 192 CA ARG E 225 15.038 -52.769 40.619 1.00160.00 ATOM 193 CA THR E 226 12.053 -53.087 42.816 1.00 64.50 ATOM 194 CA LEU E 227 9.849 -51.236 40.340 1.00113.47 ATOM 195 CA ALA E 228 10.948 -53.709 37.741 1.00 46.58 ATOM 196 CA GLN E 229 10.480 -56.612 40.049 1.00 81.01 ATOM 197 CA GLN E 230 6.770 -56.345 40.516 1.00 92.65 ATOM 198 CA LEU E 231 6.432 -55.751 36.829 1.00129.60 ATOM 199 CA ILE E 232 7.488 -59.327 36.643 1.00123.44 ATOM 200 CA ASP E 233 6.241 -60.212 40.165 1.00161.08 ATOM 201 CA PHE E 234 4.244 -59.697 42.280 1.00148.38 ATOM 202 CA GLY E 235 2.489 -58.604 39.176 1.00 40.80 TER