HEADER HYDROLASE/HYDROLASE 20-NOV-11 4A8A TITLE Asymmetric cryo-EM reconstruction of E. coli DegQ 12-mer in complex TITLE 2 with lysozyme COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L; COMPND 4 MUTATION: YES; COMPND 5 EC: 3.4.21.107; COMPND 6 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA F 35 REMARK 465 SER F 36 REMARK 465 GLN F 37 REMARK 465 GLY F 38 REMARK 465 GLN F 39 REMARK 465 LYS F 40 REMARK 465 ILE F 41 REMARK 465 PRO F 42 REMARK 465 GLU F 43 REMARK 465 GLU F 44 REMARK 465 PHE F 45 REMARK 465 LYS F 46 REMARK 465 LYS F 47 REMARK 465 PHE F 48 REMARK 465 PHE F 49 REMARK 465 GLY F 50 REMARK 465 ASP F 51 REMARK 465 ASP F 52 REMARK 465 LEU F 53 REMARK 465 PRO F 54 REMARK 465 ASP F 55 REMARK 465 GLN F 56 REMARK 465 PRO F 57 DBREF 4A8A F 1 428 UNP P39099 DEGQ_ECOLI 28 455 SEQRES 1 F 225 PRO LEU PRO SER LEU ALA PRO MET LEU GLU LYS VAL LEU SEQRES 2 F 225 PRO ALA VAL VAL SER VAL ARG VAL GLU GLY THR ALA SER SEQRES 3 F 225 GLN GLY GLN LYS ILE PRO GLU GLU PHE LYS LYS PHE PHE SEQRES 4 F 225 GLY ASP ASP LEU PRO ASP GLN PRO ALA GLN PRO PHE GLU SEQRES 5 F 225 GLY LEU GLY SER GLY VAL ILE ILE ASN ALA SER LYS GLY SEQRES 6 F 225 TYR VAL LEU THR ASN ASN HIS VAL ILE ASN GLN ALA GLN SEQRES 7 F 225 LYS ILE SER ILE GLN LEU ASN ASP GLY ARG GLU PHE ASP SEQRES 8 F 225 ALA LYS LEU ILE GLY SER ASP ASP GLN SER ASP ILE ALA SEQRES 9 F 225 LEU LEU GLN ILE GLN ASN PRO SER LYS LEU THR GLN ILE SEQRES 10 F 225 ALA ILE ALA ASP SER ASP LYS LEU ARG VAL GLY ASP PHE SEQRES 11 F 225 ALA VAL ALA VAL GLY ASN PRO PHE GLY LEU GLY GLN THR SEQRES 12 F 225 ALA THR SER GLY ILE VAL SER ALA LEU GLY ARG SER GLY SEQRES 13 F 225 LEU ASN LEU GLU GLY LEU GLU ASN PHE ILE GLN THR ASP SEQRES 14 F 225 ALA SER ILE ASN ARG GLY ASN ALA GLY GLY ALA LEU LEU SEQRES 15 F 225 ASN LEU ASN GLY GLU LEU ILE GLY ILE ASN THR ALA ILE SEQRES 16 F 225 LEU ALA PRO GLY GLY GLY SER VAL GLY ILE GLY PHE ALA SEQRES 17 F 225 ILE PRO SER ASN MET ALA ARG THR LEU ALA GLN GLN LEU SEQRES 18 F 225 ILE ASP PHE GLY ATOM 1 CA PRO F 11 43.301 -37.604 41.994 1.00185.60 ATOM 2 CA LEU F 12 45.990 -39.787 40.596 1.00121.56 ATOM 3 CA PRO F 13 49.538 -39.373 41.609 1.00121.76 ATOM 4 CA SER F 14 50.672 -35.846 41.196 1.00113.20 ATOM 5 CA LEU F 15 50.065 -34.717 37.682 1.00122.87 ATOM 6 CA ALA F 16 52.189 -31.629 38.161 1.00 41.48 ATOM 7 CA PRO F 17 55.470 -33.364 38.491 1.00139.93 ATOM 8 CA MET F 18 54.896 -35.253 35.268 1.00132.77 ATOM 9 CA LEU F 19 53.587 -32.144 33.549 1.00 63.64 ATOM 10 CA GLU F 20 56.516 -30.025 34.537 1.00144.12 ATOM 11 CA LYS F 21 58.932 -31.918 32.359 1.00118.80 ATOM 12 CA VAL F 22 56.555 -32.577 29.455 1.00 61.92 ATOM 13 CA LEU F 23 54.889 -29.203 29.019 1.00 83.30 ATOM 14 CA PRO F 24 57.615 -27.453 27.148 1.00 64.70 ATOM 15 CA ALA F 25 57.293 -30.045 24.409 1.00 30.57 ATOM 16 CA VAL F 26 53.828 -28.859 23.483 1.00 33.09 ATOM 17 CA VAL F 27 53.675 -25.643 21.557 1.00 33.94 ATOM 18 CA SER F 28 51.146 -23.211 20.185 1.00 88.47 ATOM 19 CA VAL F 29 50.972 -22.763 16.476 1.00 92.84 ATOM 20 CA ARG F 30 50.026 -19.451 14.966 1.00 51.10 ATOM 21 CA VAL F 31 48.995 -19.099 11.382 1.00 37.91 ATOM 22 CA GLU F 32 48.277 -16.282 9.001 1.00 30.11 ATOM 23 CA GLY F 33 47.040 -16.530 5.470 1.00 21.61 ATOM 24 CA THR F 34 44.571 -15.566 2.777 1.00 37.92 ATOM 25 CA ALA F 58 42.163 -13.024 0.317 1.00 16.61 ATOM 26 CA GLN F 59 41.508 -11.120 3.491 1.00151.46 ATOM 27 CA PRO F 60 44.017 -11.865 6.120 1.00154.23 ATOM 28 CA PHE F 61 42.921 -14.303 8.781 1.00 47.93 ATOM 29 CA GLU F 62 44.666 -15.539 11.864 1.00 24.95 ATOM 30 CA GLY F 63 44.253 -18.960 13.330 1.00 15.78 ATOM 31 CA LEU F 64 45.552 -20.595 16.439 1.00 75.28 ATOM 32 CA GLY F 65 46.299 -24.226 17.085 1.00 18.66 ATOM 33 CA SER F 66 48.802 -26.392 18.875 1.00 26.66 ATOM 34 CA GLY F 67 51.592 -28.751 17.964 1.00 18.60 ATOM 35 CA VAL F 68 54.018 -31.096 19.602 1.00 98.34 ATOM 36 CA ILE F 69 57.763 -31.139 19.229 1.00 47.91 ATOM 37 CA ILE F 70 58.776 -34.568 18.031 1.00 98.37 ATOM 38 CA ASN F 71 62.431 -33.855 17.469 1.00 44.63 ATOM 39 CA ALA F 72 64.136 -31.169 19.454 1.00 30.98 ATOM 40 CA SER F 73 67.299 -31.131 17.441 1.00 31.92 ATOM 41 CA LYS F 74 65.635 -30.948 14.081 1.00109.21 ATOM 42 CA GLY F 75 62.790 -28.865 15.383 1.00 25.39 ATOM 43 CA TYR F 76 60.071 -31.031 13.910 1.00 54.88 ATOM 44 CA VAL F 77 56.624 -30.278 15.213 1.00 42.50 ATOM 45 CA LEU F 78 53.555 -32.300 14.439 1.00102.20 ATOM 46 CA THR F 79 50.210 -30.649 14.050 1.00 48.59 ATOM 47 CA ASN F 80 46.926 -31.108 12.309 1.00 50.58 ATOM 48 CA ASN F 81 46.810 -30.390 8.633 1.00 41.91 ATOM 49 CA HIS F 82 43.681 -28.341 9.043 1.00 44.39 ATOM 50 CA VAL F 83 45.409 -25.942 11.340 1.00119.56 ATOM 51 CA ILE F 84 48.207 -25.506 8.759 1.00138.34 ATOM 52 CA ASN F 85 46.219 -25.723 5.527 1.00 66.84 ATOM 53 CA GLN F 86 45.500 -22.071 4.767 1.00 64.95 ATOM 54 CA ALA F 87 48.600 -20.703 6.463 1.00 68.36 ATOM 55 CA GLN F 88 50.817 -18.538 4.348 1.00 96.48 ATOM 56 CA LYS F 89 53.130 -18.099 7.303 1.00 30.52 ATOM 57 CA ILE F 90 53.395 -20.059 10.490 1.00 47.14 ATOM 58 CA SER F 91 54.996 -19.332 13.804 1.00 26.67 ATOM 59 CA ILE F 92 55.371 -21.489 16.859 1.00 85.17 ATOM 60 CA GLN F 93 55.544 -20.240 20.370 1.00103.13 ATOM 61 CA LEU F 94 56.897 -22.075 23.341 1.00 88.95 ATOM 62 CA ASN F 95 55.475 -22.024 26.826 1.00 37.70 ATOM 63 CA ASP F 96 58.496 -19.973 27.797 1.00 53.19 ATOM 64 CA GLY F 97 57.417 -17.248 25.427 1.00 29.70 ATOM 65 CA ARG F 98 60.072 -17.774 22.814 1.00109.91 ATOM 66 CA GLU F 99 58.748 -17.729 19.293 1.00 43.25 ATOM 67 CA PHE F 100 60.075 -19.207 16.105 1.00 58.91 ATOM 68 CA ASP F 101 59.255 -19.342 12.428 1.00122.47 ATOM 69 CA ALA F 102 58.199 -22.631 10.935 1.00 38.50 ATOM 70 CA LYS F 103 57.966 -24.080 7.479 1.00102.36 ATOM 71 CA LEU F 104 55.605 -26.786 6.377 1.00105.95 ATOM 72 CA ILE F 105 57.630 -29.897 5.743 1.00 39.76 ATOM 73 CA GLY F 106 54.683 -31.872 4.489 1.00 22.44 ATOM 74 CA SER F 107 51.163 -32.861 5.337 1.00 51.20 ATOM 75 CA ASP F 108 48.314 -35.045 4.259 1.00101.08 ATOM 76 CA ASP F 109 44.605 -34.317 4.092 1.00 62.64 ATOM 77 CA GLN F 110 43.048 -37.683 4.660 1.00 98.45 ATOM 78 CA SER F 111 44.704 -38.460 7.996 1.00 65.66 ATOM 79 CA ASP F 112 44.947 -34.736 8.773 1.00 71.71 ATOM 80 CA ILE F 113 48.578 -34.888 9.895 1.00107.72 ATOM 81 CA ALA F 114 51.101 -32.184 9.082 1.00 32.22 ATOM 82 CA LEU F 115 54.743 -31.812 9.940 1.00106.90 ATOM 83 CA LEU F 116 56.424 -28.491 10.482 1.00105.00 ATOM 84 CA GLN F 117 60.012 -27.590 11.061 1.00 32.53 ATOM 85 CA ILE F 118 61.136 -24.772 13.252 1.00 56.76 ATOM 86 CA GLN F 119 63.710 -22.503 11.778 1.00106.41 ATOM 87 CA ASN F 120 66.823 -22.156 13.893 1.00 62.42 ATOM 88 CA PRO F 121 65.383 -24.239 16.655 1.00 62.33 ATOM 89 CA SER F 122 67.327 -23.957 19.872 1.00 36.76 ATOM 90 CA LYS F 123 67.119 -25.427 23.358 1.00 42.33 ATOM 91 CA LEU F 124 63.932 -27.259 22.614 1.00 46.32 ATOM 92 CA THR F 125 62.335 -30.118 24.474 1.00 27.64 ATOM 93 CA GLN F 126 60.944 -33.161 22.782 1.00 94.32 ATOM 94 CA ILE F 127 58.074 -35.399 23.706 1.00 47.93 ATOM 95 CA ALA F 128 58.448 -39.125 24.026 1.00 25.70 ATOM 96 CA ILE F 129 56.068 -41.202 21.977 1.00 40.49 ATOM 97 CA ALA F 130 54.114 -44.064 23.474 1.00 34.35 ATOM 98 CA ASP F 131 52.723 -47.050 21.652 1.00 38.99 ATOM 99 CA SER F 132 49.120 -46.204 20.877 1.00 38.69 ATOM 100 CA ASP F 133 48.108 -49.767 20.214 1.00 51.41 ATOM 101 CA LYS F 134 48.719 -50.585 23.871 1.00 98.50 ATOM 102 CA LEU F 135 46.118 -48.090 25.030 1.00 57.51 ATOM 103 CA ARG F 136 43.000 -49.479 26.593 1.00187.28 ATOM 104 CA VAL F 137 39.802 -47.810 27.648 1.00 37.04 ATOM 105 CA GLY F 138 40.030 -46.404 31.124 1.00 21.71 ATOM 106 CA ASP F 139 43.602 -45.292 30.709 1.00 41.42 ATOM 107 CA PHE F 140 44.239 -41.801 32.005 1.00 51.65 ATOM 108 CA ALA F 141 44.977 -39.068 29.530 1.00 30.03 ATOM 109 CA VAL F 142 45.910 -35.434 29.672 1.00 86.55 ATOM 110 CA ALA F 143 45.369 -33.036 26.840 1.00 27.14 ATOM 111 CA VAL F 144 47.553 -30.035 26.283 1.00 30.73 ATOM 112 CA GLY F 145 46.923 -27.306 23.777 1.00 21.98 ATOM 113 CA ASN F 146 45.683 -23.784 23.459 1.00 65.96 ATOM 114 CA PRO F 147 41.989 -23.587 23.811 1.00 70.13 ATOM 115 CA PHE F 148 40.538 -20.287 22.676 1.00 61.78 ATOM 116 CA GLY F 149 44.120 -19.171 22.292 1.00 24.76 ATOM 117 CA LEU F 150 44.334 -18.694 26.030 1.00 89.89 ATOM 118 CA GLY F 151 47.790 -20.198 26.275 1.00 31.14 ATOM 119 CA GLN F 152 49.012 -23.616 27.207 1.00 65.39 ATOM 120 CA THR F 153 46.242 -25.381 29.005 1.00 32.77 ATOM 121 CA ALA F 154 46.120 -28.876 30.364 1.00 28.49 ATOM 122 CA THR F 155 42.953 -30.858 30.866 1.00 37.04 ATOM 123 CA SER F 156 42.535 -34.322 32.191 1.00 80.70 ATOM 124 CA GLY F 157 40.319 -37.273 31.414 1.00 27.89 ATOM 125 CA ILE F 158 40.405 -40.931 30.482 1.00 57.78 ATOM 126 CA VAL F 159 40.508 -42.785 27.205 1.00 40.46 ATOM 127 CA SER F 160 36.846 -43.206 26.397 1.00 45.49 ATOM 128 CA ALA F 161 37.225 -45.385 23.340 1.00 46.00 ATOM 129 CA LEU F 162 39.606 -46.337 20.589 1.00 77.10 ATOM 130 CA GLY F 163 39.433 -47.359 16.977 1.00 28.62 ATOM 131 CA ARG F 164 36.607 -45.036 16.271 1.00114.66 ATOM 132 CA SER F 165 35.653 -43.986 12.824 1.00 69.79 ATOM 133 CA GLY F 166 32.702 -43.287 10.620 1.00 32.88 ATOM 134 CA LEU F 167 32.716 -39.805 12.097 1.00 47.88 ATOM 135 CA ASN F 168 33.317 -38.602 8.557 1.00 73.46 ATOM 136 CA LEU F 169 35.553 -35.971 10.024 1.00 50.44 ATOM 137 CA GLU F 170 38.518 -37.277 8.063 1.00 96.79 ATOM 138 CA GLY F 171 39.179 -39.531 5.091 1.00 38.27 ATOM 139 CA LEU F 172 41.086 -41.875 7.317 1.00153.98 ATOM 140 CA GLU F 173 40.032 -42.059 10.854 1.00 83.92 ATOM 141 CA ASN F 174 40.921 -44.089 13.894 1.00 91.85 ATOM 142 CA PHE F 175 40.402 -41.666 16.619 1.00 82.33 ATOM 143 CA ILE F 176 41.136 -42.270 20.209 1.00 81.69 ATOM 144 CA GLN F 177 38.221 -40.789 22.047 1.00125.48 ATOM 145 CA THR F 178 38.785 -38.887 25.252 1.00 41.77 ATOM 146 CA ASP F 179 36.715 -37.122 27.900 1.00 61.45 ATOM 147 CA ALA F 180 39.462 -34.586 28.476 1.00 38.06 ATOM 148 CA SER F 181 38.186 -31.169 27.651 1.00 41.90 ATOM 149 CA ILE F 182 39.162 -30.278 24.128 1.00 88.89 ATOM 150 CA ASN F 183 38.005 -27.056 22.597 1.00 42.15 ATOM 151 CA ARG F 184 38.846 -25.106 19.526 1.00117.36 ATOM 152 CA GLY F 185 42.524 -24.300 19.508 1.00 21.66 ATOM 153 CA ASN F 186 43.283 -27.755 20.863 1.00 50.80 ATOM 154 CA ALA F 187 43.918 -29.114 17.396 1.00 39.36 ATOM 155 CA GLY F 188 47.436 -30.330 16.839 1.00 22.67 ATOM 156 CA GLY F 189 47.857 -30.493 20.584 1.00 22.36 ATOM 157 CA ALA F 190 49.030 -33.509 22.464 1.00 44.28 ATOM 158 CA LEU F 191 47.205 -36.175 24.392 1.00 94.96 ATOM 159 CA LEU F 192 49.526 -37.614 26.956 1.00 51.25 ATOM 160 CA ASN F 193 49.556 -40.579 29.266 1.00 59.34 ATOM 161 CA LEU F 194 50.554 -40.347 32.895 1.00 98.50 ATOM 162 CA ASN F 195 54.096 -40.977 31.763 1.00 52.32 ATOM 163 CA GLY F 196 53.885 -37.805 29.762 1.00 26.59 ATOM 164 CA GLU F 197 54.344 -39.795 26.584 1.00107.79 ATOM 165 CA LEU F 198 52.415 -38.880 23.459 1.00123.77 ATOM 166 CA ILE F 199 49.320 -41.049 23.008 1.00 64.58 ATOM 167 CA GLY F 200 47.880 -39.055 20.124 1.00 28.15 ATOM 168 CA ILE F 201 47.258 -35.678 18.512 1.00 98.32 ATOM 169 CA ASN F 202 43.943 -34.022 19.348 1.00 65.68 ATOM 170 CA THR F 203 42.184 -33.657 16.010 1.00 84.88 ATOM 171 CA ALA F 204 38.561 -32.802 16.674 1.00 50.50 ATOM 172 CA ILE F 205 35.508 -32.900 18.873 1.00 42.91 ATOM 173 CA LEU F 206 31.831 -33.576 18.598 1.00 55.73 ATOM 174 CA ALA F 207 29.834 -30.839 20.205 1.00 42.00 ATOM 175 CA PRO F 208 26.497 -29.452 19.355 1.00127.90 ATOM 176 CA GLY F 209 27.360 -26.235 21.167 1.00 34.31 ATOM 177 CA GLY F 210 30.734 -25.877 19.582 1.00 23.40 ATOM 178 CA GLY F 211 32.086 -26.315 23.074 1.00 25.72 ATOM 179 CA SER F 212 33.566 -29.420 24.620 1.00 57.28 ATOM 180 CA VAL F 213 30.851 -31.956 25.370 1.00140.24 ATOM 181 CA GLY F 214 33.413 -34.371 26.672 1.00 40.88 ATOM 182 CA ILE F 215 33.710 -36.231 23.413 1.00 86.37 ATOM 183 CA GLY F 216 37.036 -35.525 21.789 1.00 19.10 ATOM 184 CA PHE F 217 39.000 -37.425 19.204 1.00 42.63 ATOM 185 CA ALA F 218 42.714 -37.712 18.634 1.00 32.77 ATOM 186 CA ILE F 219 44.854 -39.403 16.049 1.00155.72 ATOM 187 CA PRO F 220 46.806 -42.109 17.651 1.00 92.19 ATOM 188 CA SER F 221 50.466 -41.655 18.395 1.00 41.31 ATOM 189 CA ASN F 222 51.439 -44.562 16.277 1.00 59.94 ATOM 190 CA MET F 223 49.472 -42.721 13.769 1.00141.82 ATOM 191 CA ALA F 224 51.281 -39.441 13.877 1.00 53.68 ATOM 192 CA ARG F 225 54.631 -41.055 14.460 1.00 81.81 ATOM 193 CA THR F 226 55.116 -43.018 11.333 1.00 59.98 ATOM 194 CA LEU F 227 53.097 -40.560 9.250 1.00137.79 ATOM 195 CA ALA F 228 55.357 -37.854 10.518 1.00 49.36 ATOM 196 CA GLN F 229 58.384 -39.962 9.927 1.00 82.19 ATOM 197 CA GLN F 230 58.232 -40.290 6.236 1.00141.98 ATOM 198 CA LEU F 231 57.296 -36.662 6.080 1.00 62.41 ATOM 199 CA ILE F 232 60.890 -36.213 7.056 1.00 71.71 ATOM 200 CA ASP F 233 61.965 -39.666 5.689 1.00175.21 ATOM 201 CA PHE F 234 61.392 -42.166 3.865 1.00212.68 ATOM 202 CA GLY F 235 60.937 -38.788 2.512 1.00 59.54 TER