HEADER HYDROLASE/HYDROLASE 20-NOV-11 4A8A TITLE Asymmetric cryo-EM reconstruction of E. coli DegQ 12-mer in complex TITLE 2 with lysozyme COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L; COMPND 4 MUTATION: YES; COMPND 5 EC: 3.4.21.107; COMPND 6 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA I 35 REMARK 465 SER I 36 REMARK 465 GLN I 37 REMARK 465 GLY I 38 REMARK 465 GLN I 39 REMARK 465 LYS I 40 REMARK 465 ILE I 41 REMARK 465 PRO I 42 REMARK 465 GLU I 43 REMARK 465 GLU I 44 REMARK 465 PHE I 45 REMARK 465 LYS I 46 REMARK 465 LYS I 47 REMARK 465 PHE I 48 REMARK 465 PHE I 49 REMARK 465 GLY I 50 REMARK 465 ASP I 51 REMARK 465 ASP I 52 REMARK 465 LEU I 53 REMARK 465 PRO I 54 REMARK 465 ASP I 55 REMARK 465 GLN I 56 REMARK 465 PRO I 57 DBREF 4A8A I 1 428 UNP P39099 DEGQ_ECOLI 28 455 SEQRES 1 I 225 PRO LEU PRO SER LEU ALA PRO MET LEU GLU LYS VAL LEU SEQRES 2 I 225 PRO ALA VAL VAL SER VAL ARG VAL GLU GLY THR ALA SER SEQRES 3 I 225 GLN GLY GLN LYS ILE PRO GLU GLU PHE LYS LYS PHE PHE SEQRES 4 I 225 GLY ASP ASP LEU PRO ASP GLN PRO ALA GLN PRO PHE GLU SEQRES 5 I 225 GLY LEU GLY SER GLY VAL ILE ILE ASN ALA SER LYS GLY SEQRES 6 I 225 TYR VAL LEU THR ASN ASN HIS VAL ILE ASN GLN ALA GLN SEQRES 7 I 225 LYS ILE SER ILE GLN LEU ASN ASP GLY ARG GLU PHE ASP SEQRES 8 I 225 ALA LYS LEU ILE GLY SER ASP ASP GLN SER ASP ILE ALA SEQRES 9 I 225 LEU LEU GLN ILE GLN ASN PRO SER LYS LEU THR GLN ILE SEQRES 10 I 225 ALA ILE ALA ASP SER ASP LYS LEU ARG VAL GLY ASP PHE SEQRES 11 I 225 ALA VAL ALA VAL GLY ASN PRO PHE GLY LEU GLY GLN THR SEQRES 12 I 225 ALA THR SER GLY ILE VAL SER ALA LEU GLY ARG SER GLY SEQRES 13 I 225 LEU ASN LEU GLU GLY LEU GLU ASN PHE ILE GLN THR ASP SEQRES 14 I 225 ALA SER ILE ASN ARG GLY ASN ALA GLY GLY ALA LEU LEU SEQRES 15 I 225 ASN LEU ASN GLY GLU LEU ILE GLY ILE ASN THR ALA ILE SEQRES 16 I 225 LEU ALA PRO GLY GLY GLY SER VAL GLY ILE GLY PHE ALA SEQRES 17 I 225 ILE PRO SER ASN MET ALA ARG THR LEU ALA GLN GLN LEU SEQRES 18 I 225 ILE ASP PHE GLY ATOM 1 CA PRO I 11 50.950 43.261 -46.643 1.00 44.51 ATOM 2 CA LEU I 12 49.298 41.950 -43.541 1.00 70.31 ATOM 3 CA PRO I 13 51.796 39.422 -42.477 1.00 98.17 ATOM 4 CA SER I 14 50.907 35.846 -41.775 1.00 40.54 ATOM 5 CA LEU I 15 50.155 34.776 -38.263 1.00 40.81 ATOM 6 CA ALA I 16 52.200 31.659 -38.719 1.00 36.04 ATOM 7 CA PRO I 17 55.427 33.438 -39.288 1.00 71.44 ATOM 8 CA MET I 18 55.300 35.340 -36.044 1.00 60.72 ATOM 9 CA LEU I 19 53.636 32.397 -34.391 1.00118.39 ATOM 10 CA GLU I 20 56.459 29.996 -35.026 1.00 43.26 ATOM 11 CA LYS I 21 59.004 31.985 -33.123 1.00 69.38 ATOM 12 CA VAL I 22 56.873 32.898 -30.133 1.00146.71 ATOM 13 CA LEU I 23 55.043 29.684 -29.399 1.00129.36 ATOM 14 CA PRO I 24 57.766 27.806 -27.651 1.00 64.19 ATOM 15 CA ALA I 25 57.646 30.541 -25.050 1.00 40.94 ATOM 16 CA VAL I 26 54.146 29.616 -23.967 1.00111.13 ATOM 17 CA VAL I 27 53.937 26.518 -21.878 1.00 44.22 ATOM 18 CA SER I 28 51.377 24.307 -20.247 1.00 32.06 ATOM 19 CA VAL I 29 51.306 24.040 -16.506 1.00 34.10 ATOM 20 CA ARG I 30 50.232 20.878 -14.816 1.00141.52 ATOM 21 CA VAL I 31 49.304 20.733 -11.192 1.00 51.20 ATOM 22 CA GLU I 32 48.660 18.032 -8.645 1.00105.89 ATOM 23 CA GLY I 33 47.594 18.472 -5.097 1.00 28.10 ATOM 24 CA THR I 34 45.032 18.021 -2.363 1.00 41.62 ATOM 25 CA ALA I 58 42.422 15.878 0.254 1.00 16.69 ATOM 26 CA GLN I 59 41.840 13.560 -2.653 1.00156.44 ATOM 27 CA PRO I 60 44.329 14.070 -5.333 1.00 72.02 ATOM 28 CA PHE I 61 43.245 15.962 -8.384 1.00 51.45 ATOM 29 CA GLU I 62 45.088 17.303 -11.352 1.00 25.07 ATOM 30 CA GLY I 63 44.548 20.636 -12.980 1.00 17.32 ATOM 31 CA LEU I 64 45.865 22.074 -16.178 1.00 81.36 ATOM 32 CA GLY I 65 46.667 25.634 -17.083 1.00 21.88 ATOM 33 CA SER I 66 49.214 27.570 -19.062 1.00 75.35 ATOM 34 CA GLY I 67 52.079 29.911 -18.394 1.00 16.65 ATOM 35 CA VAL I 68 54.534 32.099 -20.229 1.00 39.99 ATOM 36 CA ILE I 69 58.292 32.002 -20.025 1.00 46.50 ATOM 37 CA ILE I 70 59.425 35.441 -18.951 1.00 89.70 ATOM 38 CA ASN I 71 63.075 34.673 -18.750 1.00132.02 ATOM 39 CA ALA I 72 64.672 31.761 -20.448 1.00 37.63 ATOM 40 CA SER I 73 67.849 31.788 -18.472 1.00 40.21 ATOM 41 CA LYS I 74 66.274 31.900 -15.074 1.00141.67 ATOM 42 CA GLY I 75 63.351 29.794 -16.159 1.00 28.29 ATOM 43 CA TYR I 76 60.746 32.130 -14.741 1.00 66.29 ATOM 44 CA VAL I 77 57.236 31.395 -15.879 1.00 37.38 ATOM 45 CA LEU I 78 54.272 33.645 -15.239 1.00 56.66 ATOM 46 CA THR I 79 50.910 32.120 -14.527 1.00130.48 ATOM 47 CA ASN I 80 47.685 32.804 -12.738 1.00108.67 ATOM 48 CA ASN I 81 47.643 32.271 -9.017 1.00 38.58 ATOM 49 CA HIS I 82 44.451 30.298 -9.232 1.00 44.69 ATOM 50 CA VAL I 83 46.107 27.740 -11.432 1.00 39.80 ATOM 51 CA ILE I 84 48.918 27.301 -8.891 1.00122.61 ATOM 52 CA ASN I 85 47.069 27.787 -5.613 1.00 74.00 ATOM 53 CA GLN I 86 46.221 24.193 -4.654 1.00 94.39 ATOM 54 CA ALA I 87 49.291 22.695 -6.326 1.00 66.52 ATOM 55 CA GLN I 88 51.389 20.391 -4.213 1.00 49.37 ATOM 56 CA LYS I 89 53.609 19.790 -7.203 1.00 29.83 ATOM 57 CA ILE I 90 53.914 21.666 -10.446 1.00 72.56 ATOM 58 CA SER I 91 55.271 20.591 -13.784 1.00 27.39 ATOM 59 CA ILE I 92 55.711 22.555 -16.962 1.00 84.39 ATOM 60 CA GLN I 93 55.576 21.128 -20.442 1.00 98.07 ATOM 61 CA LEU I 94 57.006 22.670 -23.517 1.00103.99 ATOM 62 CA ASN I 95 55.434 22.474 -26.931 1.00 38.79 ATOM 63 CA ASP I 96 58.306 20.234 -27.884 1.00 47.57 ATOM 64 CA GLY I 97 57.254 17.720 -25.280 1.00 31.52 ATOM 65 CA ARG I 98 59.970 18.473 -22.780 1.00 67.76 ATOM 66 CA GLU I 99 58.804 18.465 -19.211 1.00 40.43 ATOM 67 CA PHE I 100 60.317 20.170 -16.218 1.00 37.41 ATOM 68 CA ASP I 101 59.449 20.584 -12.585 1.00 30.03 ATOM 69 CA ALA I 102 58.706 23.997 -11.214 1.00 27.23 ATOM 70 CA LYS I 103 58.573 25.644 -7.840 1.00 35.71 ATOM 71 CA LEU I 104 56.372 28.522 -6.844 1.00105.50 ATOM 72 CA ILE I 105 58.523 31.590 -6.445 1.00 39.21 ATOM 73 CA GLY I 106 55.677 33.738 -5.226 1.00 24.40 ATOM 74 CA SER I 107 52.235 34.938 -6.123 1.00 99.82 ATOM 75 CA ASP I 108 49.433 37.124 -4.972 1.00104.09 ATOM 76 CA ASP I 109 45.693 36.666 -4.678 1.00 62.37 ATOM 77 CA GLN I 110 44.301 40.064 -5.461 1.00 91.49 ATOM 78 CA SER I 111 45.860 40.485 -8.910 1.00 62.18 ATOM 79 CA ASP I 112 45.940 36.712 -9.395 1.00 69.25 ATOM 80 CA ILE I 113 49.539 36.662 -10.630 1.00 92.02 ATOM 81 CA ALA I 114 51.993 33.930 -9.707 1.00 32.42 ATOM 82 CA LEU I 115 55.599 33.363 -10.645 1.00 99.96 ATOM 83 CA LEU I 116 57.068 29.923 -11.173 1.00 50.65 ATOM 84 CA GLN I 117 60.646 28.792 -11.556 1.00 59.39 ATOM 85 CA ILE I 118 61.595 25.910 -13.770 1.00 44.72 ATOM 86 CA GLN I 119 64.168 23.703 -12.216 1.00 51.69 ATOM 87 CA ASN I 120 67.203 23.046 -14.345 1.00 47.31 ATOM 88 CA PRO I 121 65.766 25.011 -17.201 1.00 61.62 ATOM 89 CA SER I 122 67.594 24.403 -20.440 1.00 34.19 ATOM 90 CA LYS I 123 67.315 25.737 -23.977 1.00 43.30 ATOM 91 CA LEU I 124 64.190 27.734 -23.302 1.00 85.07 ATOM 92 CA THR I 125 62.666 30.528 -25.313 1.00 94.33 ATOM 93 CA GLN I 126 61.313 33.669 -23.743 1.00 96.50 ATOM 94 CA ILE I 127 58.644 36.039 -24.895 1.00165.54 ATOM 95 CA ALA I 128 59.120 39.725 -25.222 1.00 41.04 ATOM 96 CA ILE I 129 56.785 41.960 -23.303 1.00111.78 ATOM 97 CA ALA I 130 54.891 44.806 -24.936 1.00 34.42 ATOM 98 CA ASP I 131 53.651 47.961 -23.303 1.00 38.77 ATOM 99 CA SER I 132 50.062 47.266 -22.358 1.00 32.26 ATOM 100 CA ASP I 133 49.423 50.951 -21.899 1.00 40.55 ATOM 101 CA LYS I 134 49.713 51.431 -25.630 1.00124.18 ATOM 102 CA LEU I 135 46.942 49.019 -26.546 1.00 95.93 ATOM 103 CA ARG I 136 43.839 50.451 -28.152 1.00 98.38 ATOM 104 CA VAL I 137 40.542 48.799 -28.872 1.00 92.51 ATOM 105 CA GLY I 138 40.600 47.160 -32.246 1.00 25.88 ATOM 106 CA ASP I 139 44.151 45.931 -31.909 1.00 28.31 ATOM 107 CA PHE I 140 44.683 42.357 -32.990 1.00 45.56 ATOM 108 CA ALA I 141 45.426 39.766 -30.366 1.00 31.95 ATOM 109 CA VAL I 142 46.259 36.094 -30.299 1.00 91.48 ATOM 110 CA ALA I 143 45.711 33.871 -27.326 1.00 37.18 ATOM 111 CA VAL I 144 47.832 30.857 -26.637 1.00106.09 ATOM 112 CA GLY I 145 47.195 28.289 -23.957 1.00 21.46 ATOM 113 CA ASN I 146 45.853 24.826 -23.414 1.00 56.09 ATOM 114 CA PRO I 147 42.148 24.718 -23.614 1.00 70.35 ATOM 115 CA PHE I 148 40.659 21.541 -22.217 1.00 62.40 ATOM 116 CA GLY I 149 44.198 20.293 -21.916 1.00 24.01 ATOM 117 CA LEU I 150 44.238 19.543 -25.597 1.00 84.73 ATOM 118 CA GLY I 151 47.693 20.969 -26.052 1.00 29.00 ATOM 119 CA GLN I 152 49.077 24.256 -27.222 1.00 47.36 ATOM 120 CA THR I 153 46.305 26.077 -29.008 1.00 35.43 ATOM 121 CA ALA I 154 46.251 29.489 -30.582 1.00 33.73 ATOM 122 CA THR I 155 43.151 31.566 -31.114 1.00 97.78 ATOM 123 CA SER I 156 42.763 34.954 -32.701 1.00 35.75 ATOM 124 CA GLY I 157 40.661 38.001 -31.986 1.00 18.42 ATOM 125 CA ILE I 158 40.890 41.712 -31.301 1.00 94.48 ATOM 126 CA VAL I 159 41.080 43.720 -28.124 1.00126.36 ATOM 127 CA SER I 160 37.478 44.331 -27.277 1.00 48.73 ATOM 128 CA ALA I 161 38.071 46.671 -24.386 1.00 47.20 ATOM 129 CA LEU I 162 40.605 47.728 -21.824 1.00 99.39 ATOM 130 CA GLY I 163 40.626 48.968 -18.295 1.00 32.78 ATOM 131 CA ARG I 164 37.666 46.952 -17.297 1.00188.92 ATOM 132 CA SER I 165 36.763 46.046 -13.787 1.00144.51 ATOM 133 CA GLY I 166 33.872 45.611 -11.463 1.00 43.18 ATOM 134 CA LEU I 167 33.752 42.059 -12.696 1.00 48.83 ATOM 135 CA ASN I 168 34.508 41.126 -9.115 1.00 65.07 ATOM 136 CA LEU I 169 36.586 38.306 -10.464 1.00 44.33 ATOM 137 CA GLU I 170 39.598 39.518 -8.516 1.00 84.05 ATOM 138 CA GLY I 171 40.471 42.048 -5.854 1.00 32.79 ATOM 139 CA LEU I 172 42.458 44.127 -8.276 1.00 71.60 ATOM 140 CA GLU I 173 41.246 44.184 -11.792 1.00 93.50 ATOM 141 CA ASN I 174 42.077 45.888 -15.047 1.00104.17 ATOM 142 CA PHE I 175 41.330 43.324 -17.569 1.00 83.26 ATOM 143 CA ILE I 176 42.006 43.631 -21.198 1.00 84.76 ATOM 144 CA GLN I 177 38.971 42.150 -22.834 1.00 63.71 ATOM 145 CA THR I 178 39.377 40.026 -25.896 1.00133.56 ATOM 146 CA ASP I 179 37.156 38.168 -28.351 1.00 65.28 ATOM 147 CA ALA I 180 39.827 35.532 -28.850 1.00 45.99 ATOM 148 CA SER I 181 38.472 32.187 -27.831 1.00 42.01 ATOM 149 CA ILE I 182 39.490 31.518 -24.286 1.00 48.88 ATOM 150 CA ASN I 183 38.369 28.407 -22.524 1.00 56.86 ATOM 151 CA ARG I 184 39.188 26.555 -19.386 1.00 83.39 ATOM 152 CA GLY I 185 42.847 25.691 -19.371 1.00 21.41 ATOM 153 CA ASN I 186 43.660 29.030 -20.964 1.00 51.59 ATOM 154 CA ALA I 187 44.451 30.594 -17.623 1.00 39.50 ATOM 155 CA GLY I 188 48.020 31.709 -17.239 1.00 23.28 ATOM 156 CA GLY I 189 48.323 31.636 -20.996 1.00 21.91 ATOM 157 CA ALA I 190 49.572 34.457 -23.124 1.00 44.31 ATOM 158 CA LEU I 191 47.719 37.019 -25.135 1.00 64.70 ATOM 159 CA LEU I 192 49.991 38.337 -27.821 1.00 59.20 ATOM 160 CA ASN I 193 50.037 41.147 -30.313 1.00 53.28 ATOM 161 CA LEU I 194 50.918 40.770 -33.969 1.00 83.01 ATOM 162 CA ASN I 195 54.499 41.310 -32.900 1.00 60.07 ATOM 163 CA GLY I 196 54.289 38.202 -30.811 1.00 26.31 ATOM 164 CA GLU I 197 54.895 40.356 -27.785 1.00 44.31 ATOM 165 CA LEU I 198 53.045 39.690 -24.552 1.00151.40 ATOM 166 CA ILE I 199 50.038 41.988 -24.134 1.00112.28 ATOM 167 CA GLY I 200 48.647 40.212 -21.082 1.00 33.17 ATOM 168 CA ILE I 201 47.984 36.946 -19.272 1.00 94.22 ATOM 169 CA ASN I 202 44.567 35.436 -19.849 1.00 79.32 ATOM 170 CA THR I 203 42.899 35.244 -16.457 1.00 79.89 ATOM 171 CA ALA I 204 39.222 34.528 -16.954 1.00 57.57 ATOM 172 CA ILE I 205 36.084 34.541 -19.040 1.00122.33 ATOM 173 CA LEU I 206 32.438 35.295 -18.726 1.00 54.53 ATOM 174 CA ALA I 207 30.430 32.445 -20.100 1.00 45.42 ATOM 175 CA PRO I 208 27.064 31.206 -19.113 1.00 66.80 ATOM 176 CA GLY I 209 27.761 27.844 -20.710 1.00 29.78 ATOM 177 CA GLY I 210 31.186 27.532 -19.241 1.00 24.07 ATOM 178 CA GLY I 211 32.400 27.730 -22.804 1.00 23.26 ATOM 179 CA SER I 212 33.918 30.703 -24.567 1.00 54.10 ATOM 180 CA VAL I 213 31.277 33.324 -25.280 1.00 58.05 ATOM 181 CA GLY I 214 33.843 35.568 -26.875 1.00 35.08 ATOM 182 CA ILE I 215 34.280 37.619 -23.755 1.00 43.98 ATOM 183 CA GLY I 216 37.631 36.945 -22.163 1.00 20.12 ATOM 184 CA PHE I 217 39.747 38.943 -19.779 1.00 43.57 ATOM 185 CA ALA I 218 43.481 39.160 -19.355 1.00 33.86 ATOM 186 CA ILE I 219 45.865 40.853 -16.964 1.00 70.90 ATOM 187 CA PRO I 220 47.781 43.449 -18.816 1.00 83.23 ATOM 188 CA SER I 221 51.403 42.751 -19.552 1.00 82.35 ATOM 189 CA ASN I 222 52.501 45.826 -17.752 1.00 59.46 ATOM 190 CA MET I 223 50.607 44.255 -15.003 1.00103.21 ATOM 191 CA ALA I 224 52.276 40.893 -14.990 1.00 49.06 ATOM 192 CA ARG I 225 55.661 42.278 -15.784 1.00109.61 ATOM 193 CA THR I 226 56.350 44.398 -12.806 1.00 61.67 ATOM 194 CA LEU I 227 54.276 42.167 -10.555 1.00109.96 ATOM 195 CA ALA I 228 56.426 39.303 -11.664 1.00 46.62 ATOM 196 CA GLN I 229 59.516 41.379 -11.278 1.00 81.24 ATOM 197 CA GLN I 230 59.479 41.876 -7.578 1.00 87.01 ATOM 198 CA LEU I 231 58.480 38.274 -7.174 1.00125.93 ATOM 199 CA ILE I 232 61.972 37.639 -8.314 1.00 70.71 ATOM 200 CA ASP I 233 63.142 41.062 -7.035 1.00171.27 ATOM 201 CA PHE I 234 62.885 43.558 -5.371 1.00152.24 ATOM 202 CA GLY I 235 60.022 41.661 -3.928 1.00 48.45 TER