HEADER HYDROLASE/HYDROLASE 20-NOV-11 4A8A TITLE Asymmetric cryo-EM reconstruction of E. coli DegQ 12-mer in complex TITLE 2 with lysozyme COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L; COMPND 4 MUTATION: YES; COMPND 5 EC: 3.4.21.107; COMPND 6 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA L 35 REMARK 465 SER L 36 REMARK 465 GLN L 37 REMARK 465 GLY L 38 REMARK 465 GLN L 39 REMARK 465 LYS L 40 REMARK 465 ILE L 41 REMARK 465 PRO L 42 REMARK 465 GLU L 43 REMARK 465 GLU L 44 REMARK 465 PHE L 45 REMARK 465 LYS L 46 REMARK 465 LYS L 47 REMARK 465 PHE L 48 REMARK 465 PHE L 49 REMARK 465 GLY L 50 REMARK 465 ASP L 51 REMARK 465 ASP L 52 REMARK 465 LEU L 53 REMARK 465 PRO L 54 REMARK 465 ASP L 55 REMARK 465 GLN L 56 REMARK 465 PRO L 57 DBREF 4A8A L 1 428 UNP P39099 DEGQ_ECOLI 28 455 SEQRES 1 L 225 PRO LEU PRO SER LEU ALA PRO MET LEU GLU LYS VAL LEU SEQRES 2 L 225 PRO ALA VAL VAL SER VAL ARG VAL GLU GLY THR ALA SER SEQRES 3 L 225 GLN GLY GLN LYS ILE PRO GLU GLU PHE LYS LYS PHE PHE SEQRES 4 L 225 GLY ASP ASP LEU PRO ASP GLN PRO ALA GLN PRO PHE GLU SEQRES 5 L 225 GLY LEU GLY SER GLY VAL ILE ILE ASN ALA SER LYS GLY SEQRES 6 L 225 TYR VAL LEU THR ASN ASN HIS VAL ILE ASN GLN ALA GLN SEQRES 7 L 225 LYS ILE SER ILE GLN LEU ASN ASP GLY ARG GLU PHE ASP SEQRES 8 L 225 ALA LYS LEU ILE GLY SER ASP ASP GLN SER ASP ILE ALA SEQRES 9 L 225 LEU LEU GLN ILE GLN ASN PRO SER LYS LEU THR GLN ILE SEQRES 10 L 225 ALA ILE ALA ASP SER ASP LYS LEU ARG VAL GLY ASP PHE SEQRES 11 L 225 ALA VAL ALA VAL GLY ASN PRO PHE GLY LEU GLY GLN THR SEQRES 12 L 225 ALA THR SER GLY ILE VAL SER ALA LEU GLY ARG SER GLY SEQRES 13 L 225 LEU ASN LEU GLU GLY LEU GLU ASN PHE ILE GLN THR ASP SEQRES 14 L 225 ALA SER ILE ASN ARG GLY ASN ALA GLY GLY ALA LEU LEU SEQRES 15 L 225 ASN LEU ASN GLY GLU LEU ILE GLY ILE ASN THR ALA ILE SEQRES 16 L 225 LEU ALA PRO GLY GLY GLY SER VAL GLY ILE GLY PHE ALA SEQRES 17 L 225 ILE PRO SER ASN MET ALA ARG THR LEU ALA GLN GLN LEU SEQRES 18 L 225 ILE ASP PHE GLY ATOM 1 CA PRO L 11 -44.443 -40.790 -46.761 1.00 68.04 ATOM 2 CA LEU L 12 -44.775 -39.266 -43.399 1.00 82.91 ATOM 3 CA PRO L 13 -48.303 -38.111 -43.265 1.00104.81 ATOM 4 CA SER L 14 -48.866 -34.425 -42.983 1.00 44.99 ATOM 5 CA LEU L 15 -48.510 -33.419 -39.376 1.00 49.04 ATOM 6 CA ALA L 16 -50.574 -30.339 -39.971 1.00 41.32 ATOM 7 CA PRO L 17 -53.859 -32.091 -40.229 1.00136.17 ATOM 8 CA MET L 18 -53.345 -33.928 -36.964 1.00 37.54 ATOM 9 CA LEU L 19 -51.927 -30.847 -35.323 1.00104.21 ATOM 10 CA GLU L 20 -54.798 -28.595 -36.219 1.00 76.59 ATOM 11 CA LYS L 21 -57.266 -30.457 -34.083 1.00134.63 ATOM 12 CA VAL L 22 -54.967 -31.199 -31.149 1.00 52.58 ATOM 13 CA LEU L 23 -53.199 -27.870 -30.883 1.00 85.08 ATOM 14 CA PRO L 24 -55.831 -26.000 -28.983 1.00 69.71 ATOM 15 CA ALA L 25 -55.583 -28.561 -26.205 1.00 32.18 ATOM 16 CA VAL L 26 -52.113 -27.421 -25.285 1.00 87.32 ATOM 17 CA VAL L 27 -51.923 -24.136 -23.489 1.00 37.09 ATOM 18 CA SER L 28 -49.336 -21.800 -22.125 1.00 83.17 ATOM 19 CA VAL L 29 -49.222 -21.179 -18.434 1.00 35.12 ATOM 20 CA ARG L 30 -48.207 -17.846 -17.058 1.00153.26 ATOM 21 CA VAL L 31 -47.059 -17.445 -13.505 1.00 45.92 ATOM 22 CA GLU L 32 -46.210 -14.559 -11.248 1.00 39.00 ATOM 23 CA GLY L 33 -45.184 -14.433 -7.639 1.00 19.51 ATOM 24 CA THR L 34 -42.510 -13.980 -5.007 1.00101.29 ATOM 25 CA ALA L 58 -39.289 -11.687 -3.108 1.00 13.30 ATOM 26 CA GLN L 59 -38.681 -9.924 -6.362 1.00151.47 ATOM 27 CA PRO L 60 -41.761 -10.234 -8.447 1.00152.80 ATOM 28 CA PHE L 61 -41.062 -12.262 -11.516 1.00 60.26 ATOM 29 CA GLU L 62 -43.010 -13.878 -14.246 1.00 29.23 ATOM 30 CA GLY L 63 -42.416 -17.350 -15.502 1.00 21.60 ATOM 31 CA LEU L 64 -43.822 -19.080 -18.497 1.00 83.54 ATOM 32 CA GLY L 65 -44.520 -22.724 -19.071 1.00 22.59 ATOM 33 CA SER L 66 -47.043 -24.913 -20.795 1.00 28.05 ATOM 34 CA GLY L 67 -49.856 -27.205 -19.805 1.00 19.39 ATOM 35 CA VAL L 68 -52.299 -29.580 -21.373 1.00 96.64 ATOM 36 CA ILE L 69 -56.050 -29.593 -21.026 1.00109.07 ATOM 37 CA ILE L 70 -56.998 -32.969 -19.636 1.00179.22 ATOM 38 CA ASN L 71 -60.669 -32.310 -19.320 1.00 67.97 ATOM 39 CA ALA L 72 -62.469 -29.616 -21.196 1.00 31.39 ATOM 40 CA SER L 73 -65.548 -29.578 -19.061 1.00 33.98 ATOM 41 CA LYS L 74 -63.831 -29.255 -15.736 1.00 85.55 ATOM 42 CA GLY L 75 -61.017 -27.219 -17.164 1.00 25.33 ATOM 43 CA TYR L 76 -58.300 -29.323 -15.621 1.00 69.07 ATOM 44 CA VAL L 77 -54.853 -28.601 -16.967 1.00 39.25 ATOM 45 CA LEU L 78 -51.812 -30.728 -16.283 1.00 51.72 ATOM 46 CA THR L 79 -48.457 -29.086 -15.862 1.00115.09 ATOM 47 CA ASN L 80 -45.139 -29.501 -14.137 1.00 52.12 ATOM 48 CA ASN L 81 -44.964 -28.698 -10.471 1.00 41.38 ATOM 49 CA HIS L 82 -41.842 -26.664 -10.966 1.00 46.46 ATOM 50 CA VAL L 83 -43.602 -24.312 -13.293 1.00 94.65 ATOM 51 CA ILE L 84 -46.352 -23.756 -10.696 1.00 76.65 ATOM 52 CA ASN L 85 -44.425 -23.879 -7.454 1.00128.94 ATOM 53 CA GLN L 86 -43.582 -20.191 -6.937 1.00155.71 ATOM 54 CA ALA L 87 -46.822 -18.953 -8.504 1.00 68.64 ATOM 55 CA GLN L 88 -48.844 -16.489 -6.513 1.00 47.74 ATOM 56 CA LYS L 89 -51.243 -16.262 -9.414 1.00 30.80 ATOM 57 CA ILE L 90 -51.588 -18.361 -12.509 1.00 40.64 ATOM 58 CA SER L 91 -53.119 -17.624 -15.852 1.00 77.26 ATOM 59 CA ILE L 92 -53.649 -19.884 -18.820 1.00 95.32 ATOM 60 CA GLN L 93 -53.652 -18.720 -22.395 1.00 33.58 ATOM 61 CA LEU L 94 -55.165 -20.562 -25.307 1.00 98.05 ATOM 62 CA ASN L 95 -53.669 -20.531 -28.762 1.00 94.20 ATOM 63 CA ASP L 96 -56.671 -18.495 -29.826 1.00 51.79 ATOM 64 CA GLY L 97 -55.577 -15.730 -27.502 1.00 30.52 ATOM 65 CA ARG L 98 -58.216 -16.256 -24.868 1.00195.05 ATOM 66 CA GLU L 99 -56.932 -16.100 -21.343 1.00 37.74 ATOM 67 CA PHE L 100 -58.279 -17.587 -18.160 1.00 53.26 ATOM 68 CA ASP L 101 -57.390 -17.619 -14.496 1.00 36.12 ATOM 69 CA ALA L 102 -56.370 -20.878 -12.913 1.00 31.77 ATOM 70 CA LYS L 103 -56.043 -22.232 -9.423 1.00148.17 ATOM 71 CA LEU L 104 -53.696 -24.930 -8.244 1.00130.82 ATOM 72 CA ILE L 105 -55.717 -28.034 -7.553 1.00 62.48 ATOM 73 CA GLY L 106 -52.754 -29.960 -6.237 1.00 33.56 ATOM 74 CA SER L 107 -49.328 -31.196 -7.175 1.00 60.18 ATOM 75 CA ASP L 108 -46.393 -33.133 -5.932 1.00118.82 ATOM 76 CA ASP L 109 -42.644 -32.624 -5.930 1.00 71.71 ATOM 77 CA GLN L 110 -41.283 -36.090 -6.385 1.00103.66 ATOM 78 CA SER L 111 -42.932 -36.850 -9.738 1.00 65.73 ATOM 79 CA ASP L 112 -43.159 -33.132 -10.550 1.00 76.57 ATOM 80 CA ILE L 113 -46.808 -33.251 -11.629 1.00 98.30 ATOM 81 CA ALA L 114 -49.330 -30.545 -10.823 1.00 34.93 ATOM 82 CA LEU L 115 -52.978 -30.050 -11.676 1.00 60.35 ATOM 83 CA LEU L 116 -54.581 -26.735 -12.429 1.00 70.61 ATOM 84 CA GLN L 117 -58.188 -25.816 -12.850 1.00 40.63 ATOM 85 CA ILE L 118 -59.331 -23.075 -15.144 1.00 43.93 ATOM 86 CA GLN L 119 -61.884 -20.729 -13.735 1.00 97.80 ATOM 87 CA ASN L 120 -64.959 -20.387 -15.882 1.00137.11 ATOM 88 CA PRO L 121 -63.586 -22.647 -18.536 1.00 68.79 ATOM 89 CA SER L 122 -65.542 -22.368 -21.744 1.00 40.61 ATOM 90 CA LYS L 123 -65.365 -23.946 -25.181 1.00 48.19 ATOM 91 CA LEU L 124 -62.176 -25.745 -24.401 1.00 75.48 ATOM 92 CA THR L 125 -60.581 -28.605 -26.250 1.00 99.92 ATOM 93 CA GLN L 126 -59.364 -31.748 -24.563 1.00 50.59 ATOM 94 CA ILE L 127 -56.387 -33.905 -25.399 1.00102.11 ATOM 95 CA ALA L 128 -56.772 -37.638 -25.638 1.00 35.25 ATOM 96 CA ILE L 129 -54.373 -39.707 -23.598 1.00184.92 ATOM 97 CA ALA L 130 -52.446 -42.566 -25.078 1.00 43.00 ATOM 98 CA ASP L 131 -51.164 -45.534 -23.186 1.00 50.07 ATOM 99 CA SER L 132 -47.547 -44.746 -22.462 1.00 39.49 ATOM 100 CA ASP L 133 -46.588 -48.320 -21.795 1.00 51.98 ATOM 101 CA LYS L 134 -47.228 -49.094 -25.458 1.00118.55 ATOM 102 CA LEU L 135 -44.504 -46.756 -26.671 1.00 67.25 ATOM 103 CA ARG L 136 -41.425 -48.186 -28.303 1.00114.75 ATOM 104 CA VAL L 137 -38.239 -46.506 -29.321 1.00 27.44 ATOM 105 CA GLY L 138 -38.460 -45.159 -32.821 1.00 26.74 ATOM 106 CA ASP L 139 -42.027 -43.994 -32.483 1.00 30.96 ATOM 107 CA PHE L 140 -42.658 -40.482 -33.727 1.00 59.04 ATOM 108 CA ALA L 141 -43.361 -37.728 -31.270 1.00 34.88 ATOM 109 CA VAL L 142 -44.271 -34.075 -31.453 1.00 31.69 ATOM 110 CA ALA L 143 -43.672 -31.660 -28.656 1.00 29.74 ATOM 111 CA VAL L 144 -45.844 -28.644 -28.136 1.00 27.90 ATOM 112 CA GLY L 145 -45.218 -25.874 -25.670 1.00 21.12 ATOM 113 CA ASN L 146 -43.928 -22.372 -25.527 1.00 64.67 ATOM 114 CA PRO L 147 -40.234 -22.198 -25.763 1.00 71.42 ATOM 115 CA PHE L 148 -38.789 -18.878 -24.704 1.00 62.60 ATOM 116 CA GLY L 149 -42.358 -17.726 -24.392 1.00 25.55 ATOM 117 CA LEU L 150 -42.519 -17.278 -28.126 1.00 90.06 ATOM 118 CA GLY L 151 -45.976 -18.759 -28.334 1.00 29.56 ATOM 119 CA GLN L 152 -47.239 -22.178 -29.142 1.00 61.96 ATOM 120 CA THR L 153 -44.536 -24.008 -30.982 1.00 40.70 ATOM 121 CA ALA L 154 -44.436 -27.537 -32.251 1.00 26.34 ATOM 122 CA THR L 155 -41.304 -29.559 -32.741 1.00 32.11 ATOM 123 CA SER L 156 -40.869 -33.046 -34.072 1.00 34.88 ATOM 124 CA GLY L 157 -38.716 -35.998 -33.176 1.00 27.37 ATOM 125 CA ILE L 158 -38.759 -39.651 -32.211 1.00132.78 ATOM 126 CA VAL L 159 -38.936 -41.467 -28.922 1.00 44.63 ATOM 127 CA SER L 160 -35.273 -41.927 -28.104 1.00 48.78 ATOM 128 CA ALA L 161 -35.666 -44.066 -25.025 1.00 40.58 ATOM 129 CA LEU L 162 -38.051 -44.931 -22.252 1.00 91.18 ATOM 130 CA GLY L 163 -37.922 -45.980 -18.676 1.00 35.46 ATOM 131 CA ARG L 164 -35.037 -43.793 -17.912 1.00181.26 ATOM 132 CA SER L 165 -34.046 -42.592 -14.532 1.00118.25 ATOM 133 CA GLY L 166 -31.034 -41.959 -12.412 1.00 35.74 ATOM 134 CA LEU L 167 -31.025 -38.488 -13.892 1.00 52.13 ATOM 135 CA ASN L 168 -31.596 -37.325 -10.347 1.00 71.69 ATOM 136 CA LEU L 169 -33.790 -34.642 -11.797 1.00 51.82 ATOM 137 CA GLU L 170 -36.773 -35.887 -9.845 1.00 98.19 ATOM 138 CA GLY L 171 -37.479 -38.081 -6.854 1.00 40.74 ATOM 139 CA LEU L 172 -39.420 -40.470 -9.017 1.00128.81 ATOM 140 CA GLU L 173 -38.307 -40.665 -12.570 1.00 93.96 ATOM 141 CA ASN L 174 -39.312 -42.655 -15.619 1.00 96.33 ATOM 142 CA PHE L 175 -38.747 -40.246 -18.343 1.00 81.45 ATOM 143 CA ILE L 176 -39.542 -40.874 -21.926 1.00 69.07 ATOM 144 CA GLN L 177 -36.611 -39.488 -23.816 1.00100.39 ATOM 145 CA THR L 178 -37.183 -37.545 -26.992 1.00 52.25 ATOM 146 CA ASP L 179 -35.101 -35.865 -29.671 1.00152.87 ATOM 147 CA ALA L 180 -37.789 -33.278 -30.292 1.00 42.83 ATOM 148 CA SER L 181 -36.462 -29.867 -29.495 1.00 47.35 ATOM 149 CA ILE L 182 -37.417 -28.969 -25.977 1.00 97.07 ATOM 150 CA ASN L 183 -36.283 -25.707 -24.502 1.00 70.01 ATOM 151 CA ARG L 184 -37.115 -23.666 -21.489 1.00126.48 ATOM 152 CA GLY L 185 -40.781 -22.843 -21.484 1.00 23.58 ATOM 153 CA ASN L 186 -41.535 -26.326 -22.763 1.00 51.63 ATOM 154 CA ALA L 187 -42.173 -27.632 -19.283 1.00 41.60 ATOM 155 CA GLY L 188 -45.693 -28.803 -18.676 1.00 24.62 ATOM 156 CA GLY L 189 -46.125 -29.017 -22.417 1.00 22.47 ATOM 157 CA ALA L 190 -47.374 -32.007 -24.297 1.00 43.44 ATOM 158 CA LEU L 191 -45.529 -34.743 -26.097 1.00125.74 ATOM 159 CA LEU L 192 -47.818 -36.224 -28.652 1.00100.64 ATOM 160 CA ASN L 193 -48.098 -39.239 -30.886 1.00 60.69 ATOM 161 CA LEU L 194 -48.873 -39.025 -34.581 1.00 45.20 ATOM 162 CA ASN L 195 -52.415 -39.636 -33.445 1.00 48.36 ATOM 163 CA GLY L 196 -52.227 -36.414 -31.509 1.00 23.77 ATOM 164 CA GLU L 197 -52.660 -38.400 -28.329 1.00 49.78 ATOM 165 CA LEU L 198 -50.754 -37.443 -25.192 1.00 84.47 ATOM 166 CA ILE L 199 -47.635 -39.553 -24.707 1.00237.53 ATOM 167 CA GLY L 200 -46.257 -37.590 -21.805 1.00 35.39 ATOM 168 CA ILE L 201 -45.593 -34.182 -20.320 1.00 43.33 ATOM 169 CA ASN L 202 -42.242 -32.633 -21.130 1.00 87.46 ATOM 170 CA THR L 203 -40.482 -32.163 -17.808 1.00 81.95 ATOM 171 CA ALA L 204 -36.840 -31.434 -18.473 1.00 53.05 ATOM 172 CA ILE L 205 -33.837 -31.514 -20.720 1.00125.64 ATOM 173 CA LEU L 206 -30.158 -32.237 -20.385 1.00 67.94 ATOM 174 CA ALA L 207 -28.118 -29.605 -22.020 1.00 75.64 ATOM 175 CA PRO L 208 -24.857 -28.059 -21.338 1.00321.86 ATOM 176 CA GLY L 209 -25.565 -24.738 -22.927 1.00237.83 ATOM 177 CA GLY L 210 -29.049 -24.472 -21.533 1.00 45.64 ATOM 178 CA GLY L 211 -30.380 -24.989 -25.037 1.00 31.17 ATOM 179 CA SER L 212 -31.863 -28.123 -26.516 1.00 67.67 ATOM 180 CA VAL L 213 -29.211 -30.750 -27.188 1.00156.34 ATOM 181 CA GLY L 214 -31.784 -33.136 -28.499 1.00 43.40 ATOM 182 CA ILE L 215 -32.053 -34.944 -25.206 1.00 98.01 ATOM 183 CA GLY L 216 -35.369 -34.196 -23.577 1.00 23.06 ATOM 184 CA PHE L 217 -37.351 -36.041 -20.961 1.00 46.94 ATOM 185 CA ALA L 218 -41.062 -36.302 -20.387 1.00 35.11 ATOM 186 CA ILE L 219 -43.273 -37.861 -17.759 1.00 80.69 ATOM 187 CA PRO L 220 -45.214 -40.607 -19.330 1.00 96.27 ATOM 188 CA SER L 221 -48.894 -40.154 -20.036 1.00 43.94 ATOM 189 CA ASN L 222 -49.773 -43.020 -17.843 1.00 61.79 ATOM 190 CA MET L 223 -47.828 -41.093 -15.351 1.00123.82 ATOM 191 CA ALA L 224 -49.628 -37.837 -15.512 1.00 53.01 ATOM 192 CA ARG L 225 -53.006 -39.356 -16.036 1.00102.06 ATOM 193 CA THR L 226 -53.479 -41.305 -12.891 1.00 70.62 ATOM 194 CA LEU L 227 -51.398 -38.849 -10.838 1.00120.10 ATOM 195 CA ALA L 228 -53.659 -36.147 -12.110 1.00 49.35 ATOM 196 CA GLN L 229 -56.663 -38.250 -11.370 1.00 88.38 ATOM 197 CA GLN L 230 -56.468 -38.449 -7.627 1.00 85.43 ATOM 198 CA LEU L 231 -55.367 -34.896 -7.610 1.00 82.94 ATOM 199 CA ILE L 232 -58.912 -34.247 -8.650 1.00112.47 ATOM 200 CA ASP L 233 -60.051 -37.469 -6.949 1.00184.11 ATOM 201 CA PHE L 234 -59.563 -39.390 -4.852 1.00207.51 ATOM 202 CA GLY L 235 -56.622 -37.452 -3.631 1.00 52.13 TER