HEADER HYDROLASE/TRANSPORT PROTEIN 20-NOV-11 4A8D TITLE DegP dodecamer with bound OMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC SERINE ENDOPROTEASE DEGP; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L; COMPND 4 MUTATION: YES; COMPND 5 EC: 3.4.21.107; COMPND 6 FRAGMENT: ; COMPND 7 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 63 REMARK 465 GLN A 64 REMARK 465 SER A 65 REMARK 465 SER A 66 REMARK 465 PRO A 67 REMARK 465 PHE A 68 REMARK 465 CYS A 69 REMARK 465 GLN A 70 REMARK 465 GLY A 71 REMARK 465 GLY A 72 REMARK 465 GLN A 73 REMARK 465 GLY A 74 REMARK 465 GLY A 75 REMARK 465 ASN A 76 REMARK 465 GLY A 77 REMARK 465 GLY A 78 REMARK 465 GLY A 79 REMARK 465 GLN A 80 REMARK 465 GLN A 81 DBREF 4A8D A 1 448 UNP P0C0V0 DEGP_ECOLI 27 474 SEQRES 1 A 221 GLN MET PRO SER LEU ALA PRO MET LEU GLU LYS VAL MET SEQRES 2 A 221 PRO SER VAL VAL SER ILE ASN VAL GLU GLY SER THR PHE SEQRES 3 A 221 GLN SER SER PRO PHE CYS GLN GLY GLY GLN GLY GLY ASN SEQRES 4 A 221 GLY GLY GLY GLN GLN GLN LYS PHE MET ALA LEU GLY SER SEQRES 5 A 221 GLY VAL ILE ILE ASP ALA ASP LYS GLY TYR VAL VAL THR SEQRES 6 A 221 ASN ASN HIS VAL VAL ASP ASN ALA THR VAL ILE LYS VAL SEQRES 7 A 221 GLN LEU SER ASP GLY ARG LYS PHE ASP ALA LYS MET VAL SEQRES 8 A 221 GLY LYS ASP PRO ARG SER ASP ILE ALA LEU ILE GLN ILE SEQRES 9 A 221 GLN ASN PRO LYS ASN LEU THR ALA ILE LYS MET ALA ASP SEQRES 10 A 221 SER ASP ALA LEU ARG VAL GLY ASP TYR THR VAL ALA ILE SEQRES 11 A 221 GLY ASN PRO PHE GLY LEU GLY GLU THR VAL THR SER GLY SEQRES 12 A 221 ILE VAL SER ALA LEU GLY ARG SER GLY LEU ASN ALA GLU SEQRES 13 A 221 ASN TYR GLU ASN PHE ILE GLN THR ASP ALA ALA ILE ASN SEQRES 14 A 221 ARG GLY ASN ALA GLY GLY ALA LEU VAL ASN LEU ASN GLY SEQRES 15 A 221 GLU LEU ILE GLY ILE ASN THR ALA ILE LEU ALA PRO ASP SEQRES 16 A 221 GLY GLY ASN ILE GLY ILE GLY PHE ALA ILE PRO SER ASN SEQRES 17 A 221 MET VAL LYS ASN LEU THR SER GLN MET VAL GLU TYR GLY ATOM 1 CA GLN A 11 48.476 42.975 -40.555 1.00168.12 ATOM 2 CA MET A 12 45.346 40.807 -40.474 1.00121.24 ATOM 3 CA PRO A 13 41.849 41.480 -41.880 1.00 94.14 ATOM 4 CA SER A 14 39.125 41.695 -39.240 1.00 86.16 ATOM 5 CA LEU A 15 35.538 42.686 -38.518 1.00 83.90 ATOM 6 CA ALA A 16 36.571 44.098 -35.140 1.00 85.63 ATOM 7 CA PRO A 17 37.036 47.678 -36.429 1.00 84.42 ATOM 8 CA MET A 18 33.525 47.770 -37.890 1.00 98.09 ATOM 9 CA LEU A 19 31.986 45.899 -34.950 1.00 99.20 ATOM 10 CA GLU A 20 33.206 48.152 -32.146 1.00108.57 ATOM 11 CA LYS A 21 31.200 50.965 -33.734 1.00 97.62 ATOM 12 CA VAL A 22 28.072 48.923 -34.435 1.00 90.27 ATOM 13 CA MET A 23 27.711 46.600 -31.430 1.00 82.48 ATOM 14 CA PRO A 24 26.563 49.337 -29.019 1.00100.18 ATOM 15 CA SER A 25 23.600 49.732 -31.388 1.00 95.61 ATOM 16 CA VAL A 26 22.435 46.178 -30.692 1.00 91.80 ATOM 17 CA VAL A 27 20.623 45.550 -27.415 1.00 92.42 ATOM 18 CA SER A 28 19.179 42.451 -25.768 1.00 92.66 ATOM 19 CA ILE A 29 15.570 42.334 -24.586 1.00 89.56 ATOM 20 CA ASN A 30 14.197 40.658 -21.452 1.00113.72 ATOM 21 CA VAL A 31 10.451 40.104 -21.163 1.00110.42 ATOM 22 CA GLU A 32 7.938 38.966 -18.543 1.00140.90 ATOM 23 CA GLY A 33 4.321 38.244 -19.426 1.00147.20 ATOM 24 CA SER A 34 1.189 36.142 -19.025 1.00145.68 ATOM 25 CA THR A 35 -1.375 34.392 -21.220 1.00177.72 ATOM 26 CA GLN A 82 0.155 31.562 -16.461 1.00195.98 ATOM 27 CA LYS A 83 3.331 33.645 -16.274 1.00185.69 ATOM 28 CA PHE A 84 6.143 33.229 -18.807 1.00174.99 ATOM 29 CA MET A 85 9.638 34.595 -19.408 1.00154.00 ATOM 30 CA ALA A 86 11.306 35.218 -22.765 1.00128.97 ATOM 31 CA LEU A 87 14.385 36.928 -24.180 1.00108.35 ATOM 32 CA GLY A 88 15.613 38.159 -27.549 1.00 88.66 ATOM 33 CA SER A 89 17.419 41.038 -29.209 1.00 84.10 ATOM 34 CA GLY A 90 16.713 44.470 -30.653 1.00 82.04 ATOM 35 CA VAL A 91 18.275 47.302 -32.615 1.00 77.29 ATOM 36 CA ILE A 92 18.386 50.972 -31.673 1.00 76.80 ATOM 37 CA ILE A 93 16.828 52.917 -34.544 1.00 88.83 ATOM 38 CA ASP A 94 16.722 56.356 -32.926 1.00112.88 ATOM 39 CA ALA A 95 19.418 57.077 -30.344 1.00120.08 ATOM 40 CA ASP A 96 17.486 60.140 -29.173 1.00106.73 ATOM 41 CA LYS A 97 13.933 58.927 -28.837 1.00108.00 ATOM 42 CA GLY A 98 15.233 55.563 -27.650 1.00103.85 ATOM 43 CA TYR A 99 13.323 53.680 -30.347 1.00100.18 ATOM 44 CA VAL A 100 14.189 49.998 -30.596 1.00 80.88 ATOM 45 CA VAL A 101 12.929 47.599 -33.242 1.00 86.55 ATOM 46 CA THR A 102 12.441 43.884 -32.630 1.00 81.48 ATOM 47 CA ASN A 103 10.329 40.849 -33.511 1.00 90.44 ATOM 48 CA ASN A 104 6.674 41.027 -32.552 1.00107.46 ATOM 49 CA HIS A 105 6.889 37.445 -31.279 1.00 98.66 ATOM 50 CA VAL A 106 9.549 38.489 -28.766 1.00 96.99 ATOM 51 CA VAL A 107 7.555 41.219 -27.055 1.00114.69 ATOM 52 CA ASP A 108 4.060 39.804 -27.631 1.00160.69 ATOM 53 CA ASN A 109 1.810 39.652 -24.555 1.00156.42 ATOM 54 CA ALA A 110 4.441 41.424 -22.466 1.00126.93 ATOM 55 CA THR A 111 3.751 42.986 -19.075 1.00126.68 ATOM 56 CA VAL A 112 7.357 43.991 -18.393 1.00123.37 ATOM 57 CA ILE A 113 10.015 44.936 -20.944 1.00115.55 ATOM 58 CA LYS A 114 13.606 45.665 -19.975 1.00116.56 ATOM 59 CA VAL A 115 16.462 46.452 -22.351 1.00101.57 ATOM 60 CA GLN A 116 20.130 45.757 -21.605 1.00110.49 ATOM 61 CA LEU A 117 22.805 47.584 -23.603 1.00 99.22 ATOM 62 CA SER A 118 26.213 46.305 -24.709 1.00 98.87 ATOM 63 CA ASP A 119 27.951 48.124 -21.851 1.00107.50 ATOM 64 CA GLY A 120 25.702 46.413 -19.313 1.00105.18 ATOM 65 CA ARG A 121 23.309 49.312 -18.710 1.00101.02 ATOM 66 CA LYS A 122 19.661 48.389 -18.090 1.00103.14 ATOM 67 CA PHE A 123 16.565 50.401 -18.979 1.00102.11 ATOM 68 CA ASP A 124 12.811 49.948 -18.979 1.00112.96 ATOM 69 CA ALA A 125 10.920 50.012 -22.262 1.00101.98 ATOM 70 CA LYS A 126 7.302 50.573 -23.248 1.00108.38 ATOM 71 CA MET A 127 5.576 49.189 -26.354 1.00 98.08 ATOM 72 CA VAL A 128 5.061 51.669 -29.191 1.00 98.33 ATOM 73 CA GLY A 129 3.679 49.576 -32.041 1.00101.83 ATOM 74 CA LYS A 130 3.340 45.969 -33.157 1.00101.25 ATOM 75 CA ASP A 131 2.503 44.214 -36.424 1.00 95.99 ATOM 76 CA PRO A 132 1.964 40.431 -36.110 1.00106.08 ATOM 77 CA ARG A 133 1.501 40.093 -39.877 1.00122.99 ATOM 78 CA SER A 134 5.111 41.141 -40.497 1.00100.11 ATOM 79 CA ASP A 135 6.491 40.082 -37.102 1.00 98.82 ATOM 80 CA ILE A 136 7.906 43.564 -36.564 1.00 82.01 ATOM 81 CA ALA A 137 7.438 45.464 -33.314 1.00 82.30 ATOM 82 CA LEU A 138 8.722 48.790 -32.022 1.00 85.55 ATOM 83 CA ILE A 139 9.513 49.637 -28.408 1.00 90.36 ATOM 84 CA GLN A 140 10.863 52.784 -26.765 1.00103.85 ATOM 85 CA ILE A 141 13.525 53.000 -24.082 1.00109.96 ATOM 86 CA GLN A 142 12.381 55.018 -21.080 1.00125.69 ATOM 87 CA ASN A 143 14.805 57.785 -20.083 1.00125.72 ATOM 88 CA PRO A 144 17.150 57.342 -23.074 1.00112.46 ATOM 89 CA LYS A 145 20.664 58.409 -22.110 1.00135.57 ATOM 90 CA ASN A 146 23.721 58.322 -24.358 1.00122.30 ATOM 91 CA LEU A 147 22.566 55.732 -26.908 1.00106.68 ATOM 92 CA THR A 148 23.952 54.665 -30.284 1.00112.45 ATOM 93 CA ALA A 149 21.656 54.133 -33.264 1.00 99.46 ATOM 94 CA ILE A 150 22.482 52.064 -36.340 1.00 93.09 ATOM 95 CA LYS A 151 22.487 53.269 -39.941 1.00 95.89 ATOM 96 CA MET A 152 20.196 51.325 -42.274 1.00 96.90 ATOM 97 CA ALA A 153 21.224 50.267 -45.777 1.00 83.32 ATOM 98 CA ASP A 154 19.006 49.823 -48.827 1.00 80.81 ATOM 99 CA SER A 155 18.101 46.139 -48.760 1.00 79.92 ATOM 100 CA ASP A 156 17.205 46.401 -52.456 1.00 97.80 ATOM 101 CA ALA A 157 20.934 46.527 -53.204 1.00106.14 ATOM 102 CA LEU A 158 21.543 43.139 -51.617 1.00 85.37 ATOM 103 CA ARG A 159 22.745 40.343 -53.876 1.00 94.31 ATOM 104 CA VAL A 160 23.189 36.660 -53.085 1.00 77.51 ATOM 105 CA GLY A 161 26.857 36.341 -52.182 1.00 89.74 ATOM 106 CA ASP A 162 27.166 39.554 -50.172 1.00 85.02 ATOM 107 CA TYR A 163 28.850 39.026 -46.791 1.00 81.78 ATOM 108 CA THR A 164 26.729 39.264 -43.647 1.00 73.54 ATOM 109 CA VAL A 165 27.270 39.630 -39.902 1.00 67.20 ATOM 110 CA ALA A 166 24.674 38.626 -37.308 1.00 89.34 ATOM 111 CA ILE A 167 24.417 40.209 -33.871 1.00 80.03 ATOM 112 CA GLY A 168 22.132 39.028 -31.086 1.00 90.96 ATOM 113 CA ASN A 169 21.747 37.304 -27.724 1.00 82.89 ATOM 114 CA PRO A 170 21.705 33.499 -28.261 1.00 76.15 ATOM 115 CA PHE A 171 20.515 31.604 -25.192 1.00 82.72 ATOM 116 CA GLY A 172 21.000 34.831 -23.250 1.00 88.15 ATOM 117 CA LEU A 173 24.759 34.317 -23.385 1.00 99.37 ATOM 118 CA GLY A 174 25.135 38.002 -24.191 1.00 92.72 ATOM 119 CA GLU A 175 25.942 40.013 -27.300 1.00 75.26 ATOM 120 CA THR A 176 27.207 37.420 -29.774 1.00 77.45 ATOM 121 CA VAL A 177 28.519 38.119 -33.270 1.00 76.58 ATOM 122 CA THR A 178 28.544 35.590 -36.095 1.00 79.68 ATOM 123 CA SER A 179 29.143 35.939 -39.839 1.00 84.12 ATOM 124 CA GLY A 180 28.090 34.416 -43.146 1.00 87.81 ATOM 125 CA ILE A 181 26.720 35.307 -46.577 1.00 85.83 ATOM 126 CA VAL A 182 23.424 36.030 -48.285 1.00 71.01 ATOM 127 CA SER A 183 22.193 32.529 -49.171 1.00 81.38 ATOM 128 CA ALA A 184 19.083 33.706 -50.995 1.00 81.56 ATOM 129 CA LEU A 185 16.563 36.536 -51.226 1.00 81.52 ATOM 130 CA GLY A 186 12.792 36.920 -51.274 1.00101.79 ATOM 131 CA ARG A 187 12.279 33.632 -49.460 1.00 90.32 ATOM 132 CA SER A 188 8.746 33.087 -48.183 1.00123.15 ATOM 133 CA GLY A 189 6.282 30.360 -47.260 1.00141.51 ATOM 134 CA LEU A 190 7.000 29.858 -43.571 1.00174.42 ATOM 135 CA ASN A 191 3.556 31.313 -42.875 1.00178.36 ATOM 136 CA ALA A 192 1.378 32.010 -45.921 1.00162.83 ATOM 137 CA GLU A 193 -0.674 34.579 -43.981 1.00153.91 ATOM 138 CA ASN A 194 2.353 36.682 -43.014 1.00118.94 ATOM 139 CA TYR A 195 4.065 39.343 -45.090 1.00124.55 ATOM 140 CA GLU A 196 7.443 37.695 -45.635 1.00120.66 ATOM 141 CA ASN A 197 10.205 38.720 -48.021 1.00 94.72 ATOM 142 CA PHE A 198 13.033 37.118 -46.054 1.00 86.64 ATOM 143 CA ILE A 199 16.765 37.360 -46.572 1.00 77.24 ATOM 144 CA GLN A 200 18.427 33.992 -46.092 1.00 78.03 ATOM 145 CA THR A 201 21.839 33.596 -44.489 1.00 80.65 ATOM 146 CA ASP A 202 24.130 30.809 -43.315 1.00 80.98 ATOM 147 CA ALA A 203 25.253 33.069 -40.459 1.00 69.24 ATOM 148 CA ALA A 204 24.807 31.349 -37.102 1.00 82.30 ATOM 149 CA ILE A 205 21.407 32.227 -35.644 1.00 79.63 ATOM 150 CA ASN A 206 19.769 30.570 -32.635 1.00 92.15 ATOM 151 CA ARG A 207 17.093 31.148 -30.009 1.00 99.68 ATOM 152 CA GLY A 208 17.670 34.670 -28.737 1.00 91.58 ATOM 153 CA ASN A 209 18.959 36.160 -31.974 1.00102.85 ATOM 154 CA ALA A 210 15.408 37.225 -32.821 1.00 75.42 ATOM 155 CA GLY A 211 15.057 40.971 -33.271 1.00 89.06 ATOM 156 CA GLY A 212 18.821 40.988 -33.670 1.00104.96 ATOM 157 CA ALA A 213 20.682 42.880 -36.370 1.00 88.85 ATOM 158 CA LEU A 214 21.953 41.565 -39.691 1.00 80.39 ATOM 159 CA VAL A 215 24.464 44.016 -41.161 1.00 77.72 ATOM 160 CA ASN A 216 26.893 44.222 -44.071 1.00 85.47 ATOM 161 CA LEU A 217 30.657 44.731 -43.853 1.00 81.15 ATOM 162 CA ASN A 218 30.093 48.473 -43.422 1.00 90.74 ATOM 163 CA GLY A 219 28.019 47.907 -40.300 1.00 89.18 ATOM 164 CA GLU A 220 24.791 48.961 -41.986 1.00 85.80 ATOM 165 CA LEU A 221 21.560 47.174 -41.086 1.00 83.15 ATOM 166 CA ILE A 222 20.294 45.078 -43.988 1.00 71.40 ATOM 167 CA GLY A 223 17.804 42.978 -42.054 1.00 78.04 ATOM 168 CA ILE A 224 16.322 41.795 -38.770 1.00 82.97 ATOM 169 CA ASN A 225 16.917 38.130 -37.993 1.00 79.94 ATOM 170 CA THR A 226 13.523 36.549 -37.328 1.00 78.73 ATOM 171 CA ALA A 227 13.417 32.764 -37.755 1.00 85.62 ATOM 172 CA ILE A 228 15.497 29.709 -38.605 1.00 94.23 ATOM 173 CA LEU A 229 14.911 26.334 -40.240 1.00 89.78 ATOM 174 CA ALA A 230 15.991 23.770 -37.652 1.00110.01 ATOM 175 CA PRO A 231 14.619 20.249 -37.005 1.00116.17 ATOM 176 CA ASP A 232 16.366 20.153 -33.622 1.00128.64 ATOM 177 CA GLY A 233 15.924 23.721 -32.401 1.00118.82 ATOM 178 CA GLY A 234 19.545 24.347 -33.323 1.00110.75 ATOM 179 CA ASN A 235 20.935 26.340 -36.257 1.00 93.63 ATOM 180 CA ILE A 236 21.864 24.308 -39.330 1.00 89.32 ATOM 181 CA GLY A 237 22.930 27.139 -41.626 1.00 89.79 ATOM 182 CA ILE A 238 19.513 28.423 -42.621 1.00 85.76 ATOM 183 CA GLY A 239 18.395 31.684 -41.021 1.00 93.23 ATOM 184 CA PHE A 240 15.916 34.306 -42.189 1.00 83.77 ATOM 185 CA ALA A 241 15.851 38.063 -41.639 1.00 74.32 ATOM 186 CA ILE A 242 13.358 40.766 -42.549 1.00 78.86 ATOM 187 CA PRO A 243 14.754 43.208 -45.151 1.00 88.20 ATOM 188 CA SER A 244 15.772 46.592 -43.737 1.00 86.77 ATOM 189 CA ASN A 245 13.526 48.444 -46.187 1.00 80.97 ATOM 190 CA MET A 246 10.497 46.643 -44.776 1.00 85.16 ATOM 191 CA VAL A 247 11.562 47.616 -41.264 1.00 87.36 ATOM 192 CA LYS A 248 12.135 51.213 -42.385 1.00 89.81 ATOM 193 CA ASN A 249 8.545 51.367 -43.654 1.00 89.07 ATOM 194 CA LEU A 250 6.834 49.556 -40.786 1.00 83.91 ATOM 195 CA THR A 251 8.578 51.341 -37.920 1.00 95.41 ATOM 196 CA SER A 252 8.187 54.832 -39.394 1.00108.01 ATOM 197 CA GLN A 253 4.419 54.303 -39.289 1.00106.42 ATOM 198 CA MET A 254 4.389 52.909 -35.745 1.00106.48 ATOM 199 CA VAL A 255 6.288 56.040 -34.709 1.00127.33 ATOM 200 CA GLU A 256 3.475 58.267 -35.963 1.00112.00 ATOM 201 CA TYR A 257 0.295 56.217 -35.717 1.00113.33 ATOM 202 CA GLY A 258 1.111 53.493 -33.203 1.00115.50 TER