HEADER VIRUS 15-MAR-12 4AN5 TITLE Capsid structure and its Stability at the Late Stages of TITLE 2 Bacteriophage SPP1 Assembly COMPND MOL_ID: 1; COMPND 2 MOLECULE: COAT PROTEIN; COMPND 3 CHAIN: A, B, C, D, E, F, G; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP D 61 REMARK 465 LEU D 62 REMARK 465 ASP D 63 REMARK 465 GLY D 64 REMARK 465 ASP D 65 REMARK 465 SER D 66 REMARK 465 GLN D 67 REMARK 465 VAL D 68 REMARK 465 LEU D 69 REMARK 465 ASN D 70 REMARK 465 ASP D 71 REMARK 465 THR D 72 REMARK 465 ASP D 73 REMARK 465 ASP D 74 REMARK 465 LEU D 75 REMARK 465 VAL D 76 REMARK 465 PRO D 77 REMARK 465 GLN D 78 REMARK 465 LYS D 79 DBREF 4AN5 D 1 324 UNP Q38582 Q38582_BPSP 1 324 SEQRES 1 D 252 ASP ASP GLU LEU ASN ALA LEU ALA LYS LYS ALA GLY GLY SEQRES 2 D 252 GLY SER THR LEU ASN MET PRO TYR TRP ASN ASP LEU ASP SEQRES 3 D 252 GLY ASP SER GLN VAL LEU ASN ASP THR ASP ASP LEU VAL SEQRES 4 D 252 PRO GLN LYS ILE ASN ALA GLY GLN ASP LYS ALA VAL LEU SEQRES 5 D 252 ILE LEU ARG GLY ASN ALA TRP SER SER HIS ASP LEU ALA SEQRES 6 D 252 ALA THR LEU SER GLY SER ASP PRO MET GLN ALA ILE GLY SEQRES 7 D 252 SER ARG VAL ALA ALA TYR TRP ALA ARG GLU MET GLN LYS SEQRES 8 D 252 ILE VAL PHE ALA GLU LEU ALA GLY VAL PHE SER ASN ASP SEQRES 9 D 252 ASP MET LYS ASP ASN LYS LEU ASP ILE SER GLY THR ALA SEQRES 10 D 252 ASP GLY ILE TYR SER ALA GLU THR PHE VAL ASP ALA SER SEQRES 11 D 252 TYR LYS LEU GLY ASP HIS GLU SER LEU LEU THR ALA ILE SEQRES 12 D 252 GLY MET HIS SER ALA THR MET ALA SER ALA VAL LYS GLN SEQRES 13 D 252 ASP LEU ILE GLU PHE VAL LYS ASP SER GLN SER GLY ILE SEQRES 14 D 252 ARG PHE PRO THR TYR MET ASN LYS ARG VAL ILE VAL ASP SEQRES 15 D 252 ASP SER MET PRO VAL GLU THR LEU GLU ASP GLY THR LYS SEQRES 16 D 252 VAL PHE THR SER TYR LEU PHE GLY ALA GLY ALA LEU GLY SEQRES 17 D 252 TYR ALA GLU GLY GLN PRO GLU VAL PRO THR GLU THR ALA SEQRES 18 D 252 ARG ASN ALA LEU GLY SER GLN ASP ILE LEU ILE ASN ARG SEQRES 19 D 252 LYS HIS PHE VAL LEU HIS PRO ARG GLY VAL LYS PHE THR SEQRES 20 D 252 GLU ASN ALA MET ALA ATOM 1 CA ASP D 38 251.290 130.079 -13.883 1.00159.84 ATOM 2 CA ASP D 39 250.131 128.073 -16.823 1.00187.27 ATOM 3 CA GLU D 40 252.719 128.656 -19.462 1.00179.98 ATOM 4 CA LEU D 41 252.716 124.933 -19.978 1.00136.58 ATOM 5 CA ASN D 42 248.965 124.723 -20.036 1.00 89.11 ATOM 6 CA ALA D 43 248.882 127.277 -22.799 1.00 77.51 ATOM 7 CA LEU D 44 251.257 125.421 -25.046 1.00140.33 ATOM 8 CA ALA D 45 250.072 122.528 -27.121 1.00 41.19 ATOM 9 CA LYS D 46 250.742 119.239 -25.498 1.00 76.12 ATOM 10 CA LYS D 47 251.690 115.954 -27.019 1.00156.63 ATOM 11 CA ALA D 48 252.325 112.952 -24.857 1.00221.99 ATOM 12 CA GLY D 49 255.471 111.053 -25.528 1.00174.73 ATOM 13 CA GLY D 50 258.467 109.507 -23.894 1.00203.94 ATOM 14 CA GLY D 51 262.180 109.673 -24.376 1.00 71.27 ATOM 15 CA SER D 52 263.380 112.513 -26.506 1.00187.96 ATOM 16 CA THR D 53 260.468 114.299 -28.057 1.00 76.17 ATOM 17 CA LEU D 54 259.927 115.131 -31.705 1.00 96.25 ATOM 18 CA ASN D 55 257.463 117.684 -32.952 1.00 73.77 ATOM 19 CA MET D 56 256.788 119.180 -36.309 1.00144.22 ATOM 20 CA PRO D 57 256.945 122.861 -36.742 1.00159.42 ATOM 21 CA TYR D 58 255.710 124.705 -39.764 1.00182.06 ATOM 22 CA TRP D 59 258.133 126.640 -41.893 1.00100.60 ATOM 23 CA ASN D 60 256.845 129.737 -43.578 1.00128.75 ATOM 24 CA ILE D 80 254.864 126.376 -46.404 1.00266.61 ATOM 25 CA ASN D 81 256.827 123.391 -45.332 1.00139.95 ATOM 26 CA ALA D 82 256.790 121.208 -42.306 1.00 77.55 ATOM 27 CA GLY D 83 260.020 120.243 -40.679 1.00 46.38 ATOM 28 CA GLN D 84 260.836 118.014 -37.804 1.00 95.86 ATOM 29 CA ASP D 85 262.704 119.766 -35.071 1.00115.37 ATOM 30 CA LYS D 86 264.418 117.713 -32.458 1.00143.80 ATOM 31 CA ALA D 87 264.111 118.844 -28.896 1.00 99.71 ATOM 32 CA VAL D 88 266.284 117.275 -26.269 1.00144.90 ATOM 33 CA LEU D 89 264.447 116.259 -23.168 1.00103.79 ATOM 34 CA ILE D 90 265.487 117.911 -19.956 1.00149.12 ATOM 35 CA LEU D 91 264.605 117.352 -16.348 1.00174.47 ATOM 36 CA ARG D 92 263.820 120.280 -14.135 1.00254.67 ATOM 37 CA GLY D 93 263.100 120.005 -10.493 1.00150.93 ATOM 38 CA ASN D 94 264.454 120.490 -7.009 1.00204.15 ATOM 39 CA ALA D 95 263.911 118.746 -3.766 1.00100.89 ATOM 40 CA TRP D 96 263.133 119.815 -0.260 1.00175.73 ATOM 41 CA SER D 97 264.267 117.988 2.828 1.00110.12 ATOM 42 CA SER D 98 262.080 118.112 5.880 1.00126.44 ATOM 43 CA HIS D 99 262.377 116.586 9.292 1.00107.91 ATOM 44 CA ASP D 100 259.637 114.168 10.070 1.00 39.48 ATOM 45 CA LEU D 101 259.710 115.599 13.538 1.00 81.84 ATOM 46 CA ALA D 102 259.280 119.149 12.364 1.00 47.19 ATOM 47 CA ALA D 103 256.330 118.123 10.287 1.00 39.09 ATOM 48 CA THR D 104 254.715 116.547 13.293 1.00100.04 ATOM 49 CA LEU D 105 255.794 119.297 15.644 1.00 47.70 ATOM 50 CA SER D 106 254.618 122.092 13.427 1.00 91.02 ATOM 51 CA GLY D 107 251.047 121.928 12.309 1.00 32.56 ATOM 52 CA SER D 108 251.918 124.786 10.066 1.00 47.68 ATOM 53 CA ASP D 109 254.822 123.219 8.371 1.00145.80 ATOM 54 CA PRO D 110 253.081 120.704 6.130 1.00 90.36 ATOM 55 CA MET D 111 250.482 123.134 4.833 1.00141.74 ATOM 56 CA GLN D 112 253.120 125.619 3.892 1.00 98.25 ATOM 57 CA ALA D 113 255.229 122.971 2.226 1.00 62.78 ATOM 58 CA ILE D 114 252.354 121.602 0.195 1.00113.73 ATOM 59 CA GLY D 115 251.112 124.989 -0.901 1.00 40.52 ATOM 60 CA SER D 116 254.534 126.228 -1.875 1.00125.99 ATOM 61 CA ARG D 117 255.527 123.091 -3.694 1.00247.85 ATOM 62 CA VAL D 118 252.618 123.013 -6.068 1.00100.76 ATOM 63 CA ALA D 119 252.922 126.606 -7.225 1.00 95.16 ATOM 64 CA ALA D 120 256.656 126.529 -7.392 1.00198.80 ATOM 65 CA TYR D 121 256.507 123.466 -9.564 1.00369.42 ATOM 66 CA TRP D 122 253.969 125.041 -11.763 1.00201.06 ATOM 67 CA ALA D 123 255.941 128.188 -12.298 1.00199.00 ATOM 68 CA ARG D 124 258.999 126.083 -13.064 1.00254.48 ATOM 69 CA GLU D 125 257.099 123.602 -15.186 1.00239.18 ATOM 70 CA MET D 126 255.688 126.604 -16.770 1.00207.18 ATOM 71 CA GLN D 127 259.272 127.773 -17.123 1.00158.09 ATOM 72 CA LYS D 128 259.885 124.692 -19.181 1.00260.35 ATOM 73 CA ILE D 129 256.937 125.369 -21.422 1.00216.59 ATOM 74 CA VAL D 130 257.168 128.899 -21.079 1.00371.69 ATOM 75 CA PHE D 131 260.401 130.339 -22.007 1.00429.92 ATOM 76 CA ALA D 132 262.342 129.590 -19.046 1.00275.96 ATOM 77 CA GLU D 133 265.634 128.200 -18.028 1.00242.89 ATOM 78 CA LEU D 134 263.802 125.738 -15.896 1.00472.55 ATOM 79 CA ALA D 135 267.236 125.122 -14.506 1.00408.83 ATOM 80 CA GLY D 136 267.996 123.397 -17.742 1.00627.65 ATOM 81 CA VAL D 137 269.483 124.035 -21.138 1.00347.31 ATOM 82 CA PHE D 138 267.522 123.824 -24.328 1.00319.51 ATOM 83 CA SER D 139 268.661 123.504 -27.904 1.00204.60 ATOM 84 CA ASN D 140 268.586 126.749 -29.744 1.00185.32 ATOM 85 CA ASP D 141 265.105 127.539 -30.847 1.00182.73 ATOM 86 CA ASP D 142 263.941 129.243 -33.970 1.00244.02 ATOM 87 CA MET D 143 261.743 131.923 -32.445 1.00243.60 ATOM 88 CA LYS D 144 264.933 133.217 -31.023 1.00469.18 ATOM 89 CA ASP D 145 266.004 133.694 -34.541 1.00398.65 ATOM 90 CA ASN D 146 266.203 136.507 -35.006 1.00317.41 ATOM 91 CA LYS D 147 266.388 138.623 -31.927 1.00243.36 ATOM 92 CA LEU D 148 265.781 142.184 -32.932 1.00339.83 ATOM 93 CA ASP D 149 268.832 143.233 -31.046 1.00432.04 ATOM 94 CA ILE D 150 270.711 142.599 -27.894 1.00208.85 ATOM 95 CA SER D 151 268.849 144.033 -24.959 1.00524.89 ATOM 96 CA GLY D 152 270.213 147.200 -23.483 1.00999.99 ATOM 97 CA THR D 153 269.129 148.773 -20.259 1.00577.91 ATOM 98 CA ALA D 154 267.104 151.866 -20.903 1.00376.86 ATOM 99 CA ASP D 155 263.630 153.209 -20.954 1.00291.29 ATOM 100 CA GLY D 156 261.864 153.005 -24.240 1.00428.68 ATOM 101 CA ILE D 157 260.051 155.889 -25.803 1.00453.01 ATOM 102 CA TYR D 158 257.837 153.406 -27.531 1.00370.94 ATOM 103 CA SER D 159 255.173 153.060 -27.562 1.00219.89 ATOM 104 CA ALA D 160 252.093 155.141 -26.981 1.00405.86 ATOM 105 CA GLU D 161 249.459 154.268 -29.494 1.00445.23 ATOM 106 CA THR D 162 252.067 151.869 -30.775 1.00384.75 ATOM 107 CA PHE D 163 250.753 149.316 -28.271 1.00245.43 ATOM 108 CA VAL D 164 247.311 149.355 -29.745 1.00275.90 ATOM 109 CA ASP D 165 248.934 149.249 -33.113 1.00377.49 ATOM 110 CA ALA D 166 250.910 146.220 -32.155 1.00358.41 ATOM 111 CA SER D 167 247.768 144.386 -31.308 1.00192.81 ATOM 112 CA TYR D 168 246.354 145.195 -34.664 1.00236.83 ATOM 113 CA LYS D 169 249.558 144.119 -36.386 1.00259.64 ATOM 114 CA LEU D 170 248.931 140.668 -35.131 1.00224.72 ATOM 115 CA GLY D 171 245.687 140.621 -37.119 1.00229.14 ATOM 116 CA ASP D 172 247.288 140.603 -40.546 1.00211.44 ATOM 117 CA HIS D 173 249.079 137.429 -39.641 1.00229.38 ATOM 118 CA GLU D 174 245.655 136.276 -38.688 1.00131.22 ATOM 119 CA SER D 175 246.708 134.808 -35.423 1.00135.70 ATOM 120 CA LEU D 176 245.587 136.004 -32.064 1.00148.14 ATOM 121 CA LEU D 177 248.145 135.623 -29.356 1.00337.17 ATOM 122 CA THR D 178 247.505 133.087 -26.696 1.00256.49 ATOM 123 CA ALA D 179 248.233 136.026 -24.539 1.00295.19 ATOM 124 CA ILE D 180 249.921 139.424 -24.597 1.00255.86 ATOM 125 CA GLY D 181 252.199 139.925 -21.664 1.00366.95 ATOM 126 CA MET D 182 253.066 143.518 -21.035 1.00283.34 ATOM 127 CA HIS D 183 254.316 145.460 -18.102 1.00391.36 ATOM 128 CA SER D 184 251.612 145.877 -15.554 1.00272.11 ATOM 129 CA ALA D 185 252.058 149.571 -15.881 1.00280.10 ATOM 130 CA THR D 186 250.969 149.625 -19.484 1.00331.38 ATOM 131 CA MET D 187 248.249 147.380 -18.397 1.00391.19 ATOM 132 CA ALA D 188 247.328 149.938 -15.838 1.00307.39 ATOM 133 CA SER D 189 247.387 152.792 -18.270 1.00374.05 ATOM 134 CA ALA D 190 245.290 150.844 -20.644 1.00439.56 ATOM 135 CA VAL D 191 242.851 150.138 -17.883 1.00362.54 ATOM 136 CA LYS D 192 242.840 153.846 -17.214 1.00354.28 ATOM 137 CA GLN D 193 241.806 154.188 -20.834 1.00267.86 ATOM 138 CA ASP D 194 239.680 157.201 -21.432 1.00293.54 ATOM 139 CA LEU D 195 236.737 157.943 -23.609 1.00415.86 ATOM 140 CA ILE D 196 235.722 161.461 -24.468 1.00491.81 ATOM 141 CA GLU D 197 235.240 163.046 -21.128 1.00464.66 ATOM 142 CA PHE D 198 237.284 160.469 -19.255 1.00467.22 ATOM 143 CA VAL D 199 234.846 157.654 -18.974 1.00505.45 ATOM 144 CA LYS D 200 236.508 154.326 -18.544 1.00677.63 ATOM 145 CA ASP D 201 236.677 152.146 -21.591 1.00644.75 ATOM 146 CA SER D 202 237.168 148.989 -19.648 1.00559.83 ATOM 147 CA GLN D 203 234.260 149.481 -17.339 1.00349.60 ATOM 148 CA SER D 204 232.162 152.007 -15.553 1.00483.63 ATOM 149 CA GLY D 205 234.020 153.828 -12.751 1.00725.56 ATOM 150 CA ILE D 206 232.694 152.216 -9.680 1.00734.97 ATOM 151 CA ARG D 207 235.248 149.518 -10.017 1.00867.09 ATOM 152 CA PHE D 208 237.884 148.060 -12.280 1.00521.69 ATOM 153 CA PRO D 209 237.093 145.417 -14.872 1.00424.62 ATOM 154 CA THR D 210 238.310 141.843 -15.223 1.00378.92 ATOM 155 CA TYR D 211 241.424 140.966 -17.182 1.00461.89 ATOM 156 CA MET D 212 240.319 140.248 -20.702 1.00537.15 ATOM 157 CA ASN D 213 241.906 142.237 -23.527 1.00501.13 ATOM 158 CA LYS D 214 240.751 142.763 -27.057 1.00474.24 ATOM 159 CA ARG D 215 241.307 139.994 -29.546 1.00267.53 ATOM 160 CA VAL D 216 243.127 138.057 -26.895 1.00207.03 ATOM 161 CA ILE D 217 243.521 137.870 -23.193 1.00222.73 ATOM 162 CA VAL D 218 246.080 140.179 -21.660 1.00330.82 ATOM 163 CA ASP D 219 248.601 139.253 -19.004 1.00239.69 ATOM 164 CA ASP D 220 250.258 142.090 -17.255 1.00310.03 ATOM 165 CA SER D 221 252.928 141.648 -14.725 1.00217.70 ATOM 166 CA MET D 222 255.834 143.657 -13.381 1.00200.00 ATOM 167 CA PRO D 223 258.240 140.938 -14.345 1.00221.75 ATOM 168 CA VAL D 224 257.940 141.868 -17.963 1.00246.32 ATOM 169 CA GLU D 225 260.042 144.940 -18.168 1.00308.81 ATOM 170 CA THR D 226 257.958 147.918 -18.084 1.00150.75 ATOM 171 CA LEU D 227 257.619 150.506 -20.701 1.00259.22 ATOM 172 CA GLU D 228 259.854 148.624 -23.053 1.00304.73 ATOM 173 CA ASP D 229 262.597 149.454 -20.713 1.00153.20 ATOM 174 CA GLY D 230 264.792 146.499 -20.583 1.00104.63 ATOM 175 CA THR D 231 262.071 144.377 -22.102 1.00251.00 ATOM 176 CA LYS D 232 262.076 145.542 -25.636 1.00250.81 ATOM 177 CA VAL D 233 261.843 144.833 -29.314 1.00229.09 ATOM 178 CA PHE D 234 258.125 145.211 -29.196 1.00284.43 ATOM 179 CA THR D 235 255.313 145.917 -26.834 1.00541.75 ATOM 180 CA SER D 236 254.602 142.249 -26.557 1.00231.67 ATOM 181 CA TYR D 237 256.169 138.987 -27.457 1.00301.47 ATOM 182 CA LEU D 238 254.078 138.116 -30.237 1.00227.63 ATOM 183 CA PHE D 239 252.296 135.257 -28.670 1.00299.83 ATOM 184 CA GLY D 240 251.411 132.275 -30.753 1.00365.81 ATOM 185 CA ALA D 241 251.690 128.537 -30.730 1.00156.23 ATOM 186 CA GLY D 242 254.578 128.915 -33.066 1.00167.00 ATOM 187 CA ALA D 243 256.387 130.879 -30.385 1.00215.89 ATOM 188 CA LEU D 244 254.825 129.415 -27.509 1.00201.33 ATOM 189 CA GLY D 245 255.996 126.130 -28.901 1.00136.14 ATOM 190 CA TYR D 246 254.759 122.636 -28.357 1.00 77.70 ATOM 191 CA ALA D 247 255.376 120.755 -25.189 1.00 81.82 ATOM 192 CA GLU D 248 256.122 117.109 -25.265 1.00 55.95 ATOM 193 CA GLY D 249 256.018 115.648 -21.853 1.00183.19 ATOM 194 CA GLN D 250 256.826 112.197 -20.771 1.00106.79 ATOM 195 CA PRO D 251 256.328 112.898 -17.122 1.00122.31 ATOM 196 CA GLU D 252 254.049 115.173 -15.210 1.00140.72 ATOM 197 CA VAL D 253 255.309 117.537 -12.580 1.00287.09 ATOM 198 CA PRO D 254 255.264 115.358 -9.579 1.00165.28 ATOM 199 CA THR D 255 255.328 116.431 -6.016 1.00118.56 ATOM 200 CA GLU D 256 256.210 113.408 -4.039 1.00125.84 ATOM 201 CA THR D 257 257.730 112.813 -0.723 1.00169.35 ATOM 202 CA ALA D 258 259.849 109.779 0.018 1.00116.21 ATOM 203 CA ARG D 259 260.202 108.396 3.505 1.00 60.24 ATOM 204 CA ASN D 260 263.155 106.233 2.714 1.00216.59 ATOM 205 CA ALA D 261 265.675 108.161 0.700 1.00116.27 ATOM 206 CA LEU D 262 269.291 108.245 1.731 1.00205.59 ATOM 207 CA GLY D 263 269.358 107.566 5.404 1.00192.58 ATOM 208 CA SER D 264 266.107 109.426 5.657 1.00 58.52 ATOM 209 CA GLN D 265 264.389 106.605 7.443 1.00 81.17 ATOM 210 CA ASP D 266 267.105 106.279 10.005 1.00 36.79 ATOM 211 CA ILE D 267 266.729 109.869 10.923 1.00177.15 ATOM 212 CA LEU D 268 263.377 111.317 10.781 1.00 99.04 ATOM 213 CA ILE D 269 263.310 113.160 7.573 1.00142.80 ATOM 214 CA ASN D 270 261.305 113.120 4.426 1.00168.10 ATOM 215 CA ARG D 271 262.350 114.456 1.086 1.00113.41 ATOM 216 CA LYS D 272 259.816 116.237 -0.993 1.00133.30 ATOM 217 CA HIS D 273 260.672 116.214 -4.647 1.00 88.02 ATOM 218 CA PHE D 274 259.324 118.552 -7.231 1.00226.35 ATOM 219 CA VAL D 275 260.126 117.730 -10.764 1.00147.71 ATOM 220 CA LEU D 276 259.048 117.728 -14.319 1.00149.38 ATOM 221 CA HIS D 277 260.479 115.999 -17.331 1.00249.84 ATOM 222 CA PRO D 278 259.808 117.354 -20.740 1.00179.37 ATOM 223 CA ARG D 279 261.048 118.583 -24.057 1.00189.45 ATOM 224 CA GLY D 280 260.056 121.813 -25.663 1.00135.80 ATOM 225 CA VAL D 281 259.937 122.252 -29.306 1.00150.33 ATOM 226 CA LYS D 282 259.876 125.742 -30.691 1.00214.16 ATOM 227 CA PHE D 283 257.522 126.434 -33.531 1.00204.19 ATOM 228 CA THR D 284 257.542 129.407 -35.828 1.00204.18 ATOM 229 CA GLU D 285 259.628 132.350 -34.763 1.00323.01 ATOM 230 CA ASN D 286 258.876 135.975 -34.179 1.00322.54 ATOM 231 CA ALA D 287 255.364 135.185 -33.096 1.00283.49 ATOM 232 CA MET D 288 256.924 136.704 -29.994 1.00173.09 ATOM 233 CA ALA D 289 258.257 140.074 -28.476 1.00272.52 TER