HEADER VIRUS 15-MAR-12 4AN5 TITLE Capsid structure and its Stability at the Late Stages of TITLE 2 Bacteriophage SPP1 Assembly COMPND MOL_ID: 1; COMPND 2 MOLECULE: COAT PROTEIN; COMPND 3 CHAIN: A, B, C, D, E, F, G; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP E 61 REMARK 465 LEU E 62 REMARK 465 ASP E 63 REMARK 465 GLY E 64 REMARK 465 ASP E 65 REMARK 465 SER E 66 REMARK 465 GLN E 67 REMARK 465 VAL E 68 REMARK 465 LEU E 69 REMARK 465 ASN E 70 REMARK 465 ASP E 71 REMARK 465 THR E 72 REMARK 465 ASP E 73 REMARK 465 ASP E 74 REMARK 465 LEU E 75 REMARK 465 VAL E 76 REMARK 465 PRO E 77 REMARK 465 GLN E 78 REMARK 465 LYS E 79 DBREF 4AN5 E 1 324 UNP Q38582 Q38582_BPSP 1 324 SEQRES 1 E 252 ASP ASP GLU LEU ASN ALA LEU ALA LYS LYS ALA GLY GLY SEQRES 2 E 252 GLY SER THR LEU ASN MET PRO TYR TRP ASN ASP LEU ASP SEQRES 3 E 252 GLY ASP SER GLN VAL LEU ASN ASP THR ASP ASP LEU VAL SEQRES 4 E 252 PRO GLN LYS ILE ASN ALA GLY GLN ASP LYS ALA VAL LEU SEQRES 5 E 252 ILE LEU ARG GLY ASN ALA TRP SER SER HIS ASP LEU ALA SEQRES 6 E 252 ALA THR LEU SER GLY SER ASP PRO MET GLN ALA ILE GLY SEQRES 7 E 252 SER ARG VAL ALA ALA TYR TRP ALA ARG GLU MET GLN LYS SEQRES 8 E 252 ILE VAL PHE ALA GLU LEU ALA GLY VAL PHE SER ASN ASP SEQRES 9 E 252 ASP MET LYS ASP ASN LYS LEU ASP ILE SER GLY THR ALA SEQRES 10 E 252 ASP GLY ILE TYR SER ALA GLU THR PHE VAL ASP ALA SER SEQRES 11 E 252 TYR LYS LEU GLY ASP HIS GLU SER LEU LEU THR ALA ILE SEQRES 12 E 252 GLY MET HIS SER ALA THR MET ALA SER ALA VAL LYS GLN SEQRES 13 E 252 ASP LEU ILE GLU PHE VAL LYS ASP SER GLN SER GLY ILE SEQRES 14 E 252 ARG PHE PRO THR TYR MET ASN LYS ARG VAL ILE VAL ASP SEQRES 15 E 252 ASP SER MET PRO VAL GLU THR LEU GLU ASP GLY THR LYS SEQRES 16 E 252 VAL PHE THR SER TYR LEU PHE GLY ALA GLY ALA LEU GLY SEQRES 17 E 252 TYR ALA GLU GLY GLN PRO GLU VAL PRO THR GLU THR ALA SEQRES 18 E 252 ARG ASN ALA LEU GLY SER GLN ASP ILE LEU ILE ASN ARG SEQRES 19 E 252 LYS HIS PHE VAL LEU HIS PRO ARG GLY VAL LYS PHE THR SEQRES 20 E 252 GLU ASN ALA MET ALA ATOM 1 CA ASP E 38 237.226 157.484 14.922 1.00159.84 ATOM 2 CA ASP E 39 237.498 153.760 14.681 1.00187.27 ATOM 3 CA GLU E 40 241.141 153.099 14.120 1.00179.98 ATOM 4 CA LEU E 41 240.857 150.491 16.812 1.00136.58 ATOM 5 CA ASN E 42 237.715 149.029 15.369 1.00 89.11 ATOM 6 CA ALA E 43 239.471 148.541 12.078 1.00 77.51 ATOM 7 CA LEU E 44 242.348 146.741 13.727 1.00140.33 ATOM 8 CA ALA E 45 241.600 143.120 14.285 1.00 41.19 ATOM 9 CA LYS E 46 240.828 142.287 17.840 1.00 76.12 ATOM 10 CA LYS E 47 241.506 139.161 19.780 1.00156.63 ATOM 11 CA ALA E 48 240.576 138.896 23.408 1.00221.99 ATOM 12 CA GLY E 49 243.242 137.604 25.691 1.00174.73 ATOM 13 CA GLY E 50 244.771 138.039 29.071 1.00203.94 ATOM 14 CA GLY E 51 248.243 138.795 30.277 1.00 71.27 ATOM 15 CA SER E 52 250.600 139.634 27.499 1.00187.96 ATOM 16 CA THR E 53 248.937 139.013 24.211 1.00 76.17 ATOM 17 CA LEU E 54 250.091 136.473 21.663 1.00 96.25 ATOM 18 CA ASN E 55 249.033 136.464 18.051 1.00 73.77 ATOM 19 CA MET E 56 250.124 134.511 15.060 1.00144.22 ATOM 20 CA PRO E 57 251.350 136.300 12.049 1.00159.42 ATOM 21 CA TYR E 58 251.896 134.704 8.698 1.00182.06 ATOM 22 CA TRP E 59 255.259 134.676 7.122 1.00100.60 ATOM 23 CA ASN E 60 256.802 133.911 3.816 1.00128.75 ATOM 24 CA ILE E 80 256.457 129.333 5.277 1.00266.61 ATOM 25 CA ASN E 81 255.366 129.861 8.805 1.00139.95 ATOM 26 CA ALA E 82 252.691 130.910 11.023 1.00 77.55 ATOM 27 CA GLY E 83 254.960 132.250 13.588 1.00 46.38 ATOM 28 CA GLN E 84 254.003 133.430 16.995 1.00 95.86 ATOM 29 CA ASP E 85 255.026 136.968 17.669 1.00115.37 ATOM 30 CA LYS E 86 255.009 138.206 21.194 1.00143.80 ATOM 31 CA ALA E 87 253.626 141.637 21.815 1.00 99.71 ATOM 32 CA VAL E 88 254.247 143.232 25.162 1.00144.90 ATOM 33 CA LEU E 89 251.361 144.920 26.853 1.00103.79 ATOM 34 CA ILE E 90 251.205 148.657 27.380 1.00149.12 ATOM 35 CA LEU E 91 248.714 150.843 29.151 1.00174.47 ATOM 36 CA ARG E 92 247.451 153.962 27.496 1.00254.67 ATOM 37 CA GLY E 93 245.126 156.383 29.114 1.00150.93 ATOM 38 CA ASN E 94 244.813 159.735 30.808 1.00204.15 ATOM 39 CA ALA E 95 242.611 161.070 33.500 1.00100.89 ATOM 40 CA TRP E 96 240.499 164.129 33.945 1.00175.73 ATOM 41 CA SER E 97 239.831 165.799 37.250 1.00110.12 ATOM 42 CA SER E 98 236.547 167.554 37.735 1.00126.44 ATOM 43 CA HIS E 99 234.977 169.305 40.628 1.00107.91 ATOM 44 CA ASP E 100 232.230 167.111 41.924 1.00 39.48 ATOM 45 CA LEU E 101 230.207 170.208 42.545 1.00 81.84 ATOM 46 CA ALA E 102 230.760 171.508 39.055 1.00 47.19 ATOM 47 CA ALA E 103 229.632 168.224 37.637 1.00 39.09 ATOM 48 CA THR E 104 226.445 168.419 39.619 1.00100.04 ATOM 49 CA LEU E 105 226.010 172.130 39.054 1.00 47.70 ATOM 50 CA SER E 106 226.558 171.971 35.353 1.00 91.02 ATOM 51 CA GLY E 107 225.518 169.251 32.989 1.00 32.56 ATOM 52 CA SER E 108 227.985 170.836 30.636 1.00 47.68 ATOM 53 CA ASP E 109 230.921 170.085 32.840 1.00145.80 ATOM 54 CA PRO E 110 230.443 166.372 32.596 1.00 90.36 ATOM 55 CA MET E 111 229.665 167.012 28.979 1.00141.74 ATOM 56 CA GLN E 112 233.126 168.242 28.252 1.00 98.25 ATOM 57 CA ALA E 113 234.699 165.351 30.098 1.00 62.78 ATOM 58 CA ILE E 114 232.626 162.749 28.307 1.00113.73 ATOM 59 CA GLY E 115 233.165 164.234 24.884 1.00 40.52 ATOM 60 CA SER E 116 236.883 164.630 25.340 1.00125.99 ATOM 61 CA ARG E 117 237.403 161.213 26.824 1.00247.85 ATOM 62 CA VAL E 118 235.880 159.264 24.003 1.00100.76 ATOM 63 CA ALA E 119 237.824 160.952 21.224 1.00 95.16 ATOM 64 CA ALA E 120 241.032 161.029 23.139 1.00198.80 ATOM 65 CA TYR E 121 240.757 157.336 23.777 1.00369.42 ATOM 66 CA TRP E 122 240.034 156.684 20.201 1.00201.06 ATOM 67 CA ALA E 123 242.986 158.618 18.931 1.00199.00 ATOM 68 CA ARG E 124 245.182 156.816 21.441 1.00254.48 ATOM 69 CA GLU E 125 243.597 153.444 20.818 1.00239.18 ATOM 70 CA MET E 126 244.060 154.299 17.273 1.00207.18 ATOM 71 CA GLN E 127 247.640 155.099 18.214 1.00158.09 ATOM 72 CA LYS E 128 247.956 151.526 19.326 1.00260.35 ATOM 73 CA ILE E 129 246.600 150.192 16.078 1.00216.59 ATOM 74 CA VAL E 130 248.652 153.035 14.669 1.00371.69 ATOM 75 CA PHE E 131 252.250 153.172 15.323 1.00429.92 ATOM 76 CA ALA E 132 252.299 155.090 18.390 1.00275.96 ATOM 77 CA GLU E 133 253.806 155.083 21.794 1.00242.89 ATOM 78 CA LEU E 134 250.298 155.010 23.126 1.00472.55 ATOM 79 CA ALA E 135 251.852 155.920 26.423 1.00408.83 ATOM 80 CA GLY E 136 253.590 152.598 26.395 1.00627.65 ATOM 81 CA VAL E 137 256.879 151.210 25.334 1.00347.31 ATOM 82 CA PHE E 138 256.823 149.965 21.813 1.00319.51 ATOM 83 CA SER E 139 259.186 148.360 19.376 1.00204.60 ATOM 84 CA ASN E 140 260.154 150.590 16.541 1.00185.32 ATOM 85 CA ASP E 141 257.256 150.714 14.187 1.00182.73 ATOM 86 CA ASP E 142 257.338 147.858 11.752 1.00244.02 ATOM 87 CA MET E 143 256.498 149.687 8.545 1.00243.60 ATOM 88 CA LYS E 144 259.751 151.409 9.099 1.00469.18 ATOM 89 CA ASP E 145 261.286 148.047 8.789 1.00398.65 ATOM 90 CA ASN E 146 260.951 147.076 5.193 1.00317.41 ATOM 91 CA LYS E 147 259.402 150.354 4.307 1.00243.36 ATOM 92 CA LEU E 148 257.635 150.077 1.013 1.00339.83 ATOM 93 CA ASP E 149 259.593 153.079 -0.090 1.00432.04 ATOM 94 CA ILE E 150 262.309 155.051 1.570 1.00208.85 ATOM 95 CA SER E 151 261.101 158.378 2.763 1.00524.89 ATOM 96 CA GLY E 152 261.840 161.118 0.293 1.00999.99 ATOM 97 CA THR E 153 260.929 164.724 -0.046 1.00577.91 ATOM 98 CA ALA E 154 257.947 165.134 -2.294 1.00376.86 ATOM 99 CA ASP E 155 256.430 168.155 -3.893 1.00291.29 ATOM 100 CA GLY E 156 253.160 169.008 -2.265 1.00428.68 ATOM 101 CA ILE E 157 250.287 167.456 -4.096 1.00453.01 ATOM 102 CA TYR E 158 247.802 164.667 -4.103 1.00370.94 ATOM 103 CA SER E 159 250.116 163.416 -6.772 1.00219.89 ATOM 104 CA ALA E 160 249.291 163.074 -10.435 1.00405.86 ATOM 105 CA GLU E 161 250.072 159.639 -11.707 1.00445.23 ATOM 106 CA THR E 162 251.197 159.035 -8.162 1.00384.75 ATOM 107 CA PHE E 163 247.605 158.083 -7.328 1.00245.43 ATOM 108 CA VAL E 164 247.563 155.286 -9.819 1.00275.90 ATOM 109 CA ASP E 165 250.964 154.353 -8.574 1.00377.49 ATOM 110 CA ALA E 166 249.723 154.210 -5.047 1.00358.41 ATOM 111 CA SER E 167 247.115 151.719 -6.020 1.00192.81 ATOM 112 CA TYR E 168 249.718 149.560 -7.589 1.00236.83 ATOM 113 CA LYS E 169 251.953 149.862 -4.542 1.00259.64 ATOM 114 CA LEU E 170 249.319 148.096 -2.586 1.00224.72 ATOM 115 CA GLY E 171 249.749 145.086 -4.872 1.00229.14 ATOM 116 CA ASP E 172 253.227 144.160 -3.705 1.00211.44 ATOM 117 CA HIS E 173 251.906 143.793 -0.209 1.00229.38 ATOM 118 CA GLU E 174 249.352 141.638 -1.890 1.00131.22 ATOM 119 CA SER E 175 246.443 143.391 -0.324 1.00135.70 ATOM 120 CA LEU E 176 244.534 146.491 -1.219 1.00148.14 ATOM 121 CA LEU E 177 244.607 149.138 1.432 1.00337.17 ATOM 122 CA THR E 178 241.542 149.508 3.481 1.00256.49 ATOM 123 CA ALA E 179 241.605 153.258 2.892 1.00295.19 ATOM 124 CA ILE E 180 243.826 155.968 1.429 1.00255.86 ATOM 125 CA GLY E 181 244.315 158.831 3.794 1.00366.95 ATOM 126 CA MET E 182 245.551 161.955 2.132 1.00283.34 ATOM 127 CA HIS E 183 245.615 165.566 3.059 1.00391.36 ATOM 128 CA SER E 184 242.196 167.103 2.664 1.00272.11 ATOM 129 CA ALA E 185 243.720 169.418 0.162 1.00280.10 ATOM 130 CA THR E 186 244.682 166.638 -2.184 1.00331.38 ATOM 131 CA MET E 187 241.301 165.306 -1.535 1.00391.19 ATOM 132 CA ALA E 188 239.930 168.618 -2.578 1.00307.39 ATOM 133 CA SER E 189 241.989 168.791 -5.712 1.00374.05 ATOM 134 CA ALA E 190 240.961 165.331 -6.603 1.00439.56 ATOM 135 CA VAL E 191 237.371 166.279 -6.076 1.00362.54 ATOM 136 CA LYS E 192 238.019 169.211 -8.350 1.00354.28 ATOM 137 CA GLN E 193 239.109 166.619 -10.877 1.00267.86 ATOM 138 CA ASP E 194 238.487 167.709 -14.396 1.00293.54 ATOM 139 CA LEU E 195 237.394 165.982 -17.519 1.00415.86 ATOM 140 CA ILE E 196 237.947 167.472 -20.929 1.00491.81 ATOM 141 CA GLU E 197 236.275 170.795 -20.685 1.00464.66 ATOM 142 CA PHE E 198 236.297 170.885 -16.902 1.00467.22 ATOM 143 CA VAL E 199 233.406 168.667 -16.090 1.00505.45 ATOM 144 CA LYS E 200 233.650 167.143 -12.678 1.00677.63 ATOM 145 CA ASP E 201 234.756 163.563 -12.531 1.00644.75 ATOM 146 CA SER E 202 233.302 162.978 -9.136 1.00559.83 ATOM 147 CA GLN E 203 229.890 164.289 -9.909 1.00349.60 ATOM 148 CA SER E 204 227.911 166.799 -11.848 1.00483.63 ATOM 149 CA GLY E 205 228.627 170.406 -10.799 1.00725.56 ATOM 150 CA ILE E 206 225.671 171.278 -8.728 1.00734.97 ATOM 151 CA ARG E 207 227.340 169.775 -5.750 1.00867.09 ATOM 152 CA PHE E 208 230.280 167.724 -4.596 1.00521.69 ATOM 153 CA PRO E 209 230.177 163.945 -4.435 1.00424.62 ATOM 154 CA THR E 210 230.503 161.574 -1.492 1.00378.92 ATOM 155 CA TYR E 211 233.850 160.225 -0.364 1.00461.89 ATOM 156 CA MET E 212 234.381 156.986 -2.195 1.00537.15 ATOM 157 CA ASN E 213 237.536 156.592 -4.281 1.00501.13 ATOM 158 CA LYS E 214 238.402 154.124 -6.968 1.00474.24 ATOM 159 CA ARG E 215 239.572 150.743 -5.833 1.00267.53 ATOM 160 CA VAL E 216 239.169 151.864 -2.270 1.00207.03 ATOM 161 CA ILE E 217 237.458 154.392 -0.099 1.00222.73 ATOM 162 CA VAL E 218 239.326 157.622 0.455 1.00330.82 ATOM 163 CA ASP E 219 239.822 159.360 3.772 1.00239.69 ATOM 164 CA ASP E 220 240.955 162.903 3.615 1.00310.03 ATOM 165 CA SER E 221 241.753 164.926 6.614 1.00217.70 ATOM 166 CA MET E 222 243.932 167.892 7.460 1.00200.00 ATOM 167 CA PRO E 223 245.670 165.901 10.127 1.00221.75 ATOM 168 CA VAL E 224 247.690 163.983 7.644 1.00246.32 ATOM 169 CA GLU E 225 249.974 166.854 6.717 1.00308.81 ATOM 170 CA THR E 226 248.701 168.661 3.964 1.00150.75 ATOM 171 CA LEU E 227 250.302 168.911 0.587 1.00259.22 ATOM 172 CA GLU E 228 252.489 165.961 1.398 1.00304.73 ATOM 173 CA ASP E 229 254.055 168.396 3.718 1.00153.20 ATOM 174 CA GLY E 230 254.892 166.674 6.864 1.00104.63 ATOM 175 CA THR E 231 252.759 163.718 5.865 1.00251.00 ATOM 176 CA LYS E 232 254.897 162.081 3.306 1.00250.81 ATOM 177 CA VAL E 233 256.915 159.080 2.286 1.00229.09 ATOM 178 CA PHE E 234 254.274 158.280 -0.237 1.00284.43 ATOM 179 CA THR E 235 250.895 159.364 -1.395 1.00541.75 ATOM 180 CA SER E 236 249.372 157.069 1.139 1.00231.67 ATOM 181 CA TYR E 237 250.386 154.886 3.987 1.00301.47 ATOM 182 CA LEU E 238 250.004 151.694 2.401 1.00227.63 ATOM 183 CA PHE E 239 247.053 150.562 4.363 1.00299.83 ATOM 184 CA GLY E 240 246.338 147.012 5.284 1.00365.81 ATOM 185 CA ALA E 241 245.482 144.784 8.143 1.00156.23 ATOM 186 CA GLY E 242 248.822 143.200 7.620 1.00167.00 ATOM 187 CA ALA E 243 250.432 146.557 8.308 1.00215.89 ATOM 188 CA LEU E 244 247.808 147.839 10.698 1.00201.33 ATOM 189 CA GLY E 245 248.337 145.054 13.126 1.00136.14 ATOM 190 CA TYR E 246 246.294 142.974 15.489 1.00 77.70 ATOM 191 CA ALA E 247 245.212 144.199 18.848 1.00 81.82 ATOM 192 CA GLU E 248 245.075 141.882 21.757 1.00 55.95 ATOM 193 CA GLY E 249 243.350 143.457 24.642 1.00183.19 ATOM 194 CA GLN E 250 242.871 142.137 28.075 1.00106.79 ATOM 195 CA PRO E 251 241.162 145.238 29.311 1.00122.31 ATOM 196 CA GLU E 252 238.572 147.299 27.565 1.00140.72 ATOM 197 CA VAL E 253 238.859 151.042 27.294 1.00287.09 ATOM 198 CA PRO E 254 237.141 152.093 30.410 1.00165.28 ATOM 199 CA THR E 255 235.743 155.453 31.187 1.00118.56 ATOM 200 CA GLU E 256 235.185 155.518 34.863 1.00125.84 ATOM 201 CA THR E 257 234.936 158.176 37.416 1.00169.35 ATOM 202 CA ALA E 258 236.022 157.659 40.994 1.00116.21 ATOM 203 CA ARG E 259 234.554 159.652 43.834 1.00 60.24 ATOM 204 CA ASN E 260 237.196 158.707 46.313 1.00216.59 ATOM 205 CA ALA E 261 240.604 159.013 44.762 1.00116.27 ATOM 206 CA LEU E 262 243.331 160.940 46.496 1.00205.59 ATOM 207 CA GLY E 263 241.632 163.389 48.744 1.00192.58 ATOM 208 CA SER E 264 238.925 163.661 46.155 1.00 58.52 ATOM 209 CA GLN E 265 236.198 162.911 48.621 1.00 81.17 ATOM 210 CA ASP E 266 237.379 165.506 51.055 1.00 36.79 ATOM 211 CA ILE E 267 237.155 168.135 48.424 1.00177.15 ATOM 212 CA LEU E 268 234.479 167.842 45.953 1.00 99.04 ATOM 213 CA ILE E 269 236.141 166.408 42.972 1.00142.80 ATOM 214 CA ASN E 270 235.796 163.370 40.832 1.00168.10 ATOM 215 CA ARG E 271 238.421 161.883 38.611 1.00113.41 ATOM 216 CA LYS E 272 237.392 160.541 35.287 1.00133.30 ATOM 217 CA HIS E 273 239.794 157.983 33.955 1.00 88.02 ATOM 218 CA PHE E 274 240.116 156.924 30.389 1.00226.35 ATOM 219 CA VAL E 275 242.301 153.991 29.739 1.00147.71 ATOM 220 CA LEU E 276 242.962 150.943 27.725 1.00149.38 ATOM 221 CA HIS E 277 245.332 148.079 28.278 1.00249.84 ATOM 222 CA PRO E 278 246.482 146.035 25.379 1.00179.37 ATOM 223 CA ARG E 279 249.289 144.532 23.383 1.00189.45 ATOM 224 CA GLY E 280 249.830 145.235 19.776 1.00135.80 ATOM 225 CA VAL E 281 251.206 142.791 17.412 1.00150.33 ATOM 226 CA LYS E 282 252.477 144.020 14.097 1.00214.16 ATOM 227 CA PHE E 283 251.597 141.972 11.091 1.00204.19 ATOM 228 CA THR E 284 252.982 142.317 7.614 1.00204.18 ATOM 229 CA GLU E 285 254.754 145.530 6.910 1.00323.01 ATOM 230 CA ASN E 286 255.374 147.977 4.122 1.00322.54 ATOM 231 CA ALA E 287 251.651 147.786 3.686 1.00283.49 ATOM 232 CA MET E 288 252.243 151.372 4.744 1.00173.09 ATOM 233 CA ALA E 289 253.697 154.811 3.515 1.00272.52 TER