HEADER VIRUS 15-MAR-12 4AN5 TITLE Capsid structure and its Stability at the Late Stages of TITLE 2 Bacteriophage SPP1 Assembly COMPND MOL_ID: 1; COMPND 2 MOLECULE: COAT PROTEIN; COMPND 3 CHAIN: A, B, C, D, E, F, G; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP F 61 REMARK 465 LEU F 62 REMARK 465 ASP F 63 REMARK 465 GLY F 64 REMARK 465 ASP F 65 REMARK 465 SER F 66 REMARK 465 GLN F 67 REMARK 465 VAL F 68 REMARK 465 LEU F 69 REMARK 465 ASN F 70 REMARK 465 ASP F 71 REMARK 465 THR F 72 REMARK 465 ASP F 73 REMARK 465 ASP F 74 REMARK 465 LEU F 75 REMARK 465 VAL F 76 REMARK 465 PRO F 77 REMARK 465 GLN F 78 REMARK 465 LYS F 79 DBREF 4AN5 F 1 324 UNP Q38582 Q38582_BPSP 1 324 SEQRES 1 F 252 ASP ASP GLU LEU ASN ALA LEU ALA LYS LYS ALA GLY GLY SEQRES 2 F 252 GLY SER THR LEU ASN MET PRO TYR TRP ASN ASP LEU ASP SEQRES 3 F 252 GLY ASP SER GLN VAL LEU ASN ASP THR ASP ASP LEU VAL SEQRES 4 F 252 PRO GLN LYS ILE ASN ALA GLY GLN ASP LYS ALA VAL LEU SEQRES 5 F 252 ILE LEU ARG GLY ASN ALA TRP SER SER HIS ASP LEU ALA SEQRES 6 F 252 ALA THR LEU SER GLY SER ASP PRO MET GLN ALA ILE GLY SEQRES 7 F 252 SER ARG VAL ALA ALA TYR TRP ALA ARG GLU MET GLN LYS SEQRES 8 F 252 ILE VAL PHE ALA GLU LEU ALA GLY VAL PHE SER ASN ASP SEQRES 9 F 252 ASP MET LYS ASP ASN LYS LEU ASP ILE SER GLY THR ALA SEQRES 10 F 252 ASP GLY ILE TYR SER ALA GLU THR PHE VAL ASP ALA SER SEQRES 11 F 252 TYR LYS LEU GLY ASP HIS GLU SER LEU LEU THR ALA ILE SEQRES 12 F 252 GLY MET HIS SER ALA THR MET ALA SER ALA VAL LYS GLN SEQRES 13 F 252 ASP LEU ILE GLU PHE VAL LYS ASP SER GLN SER GLY ILE SEQRES 14 F 252 ARG PHE PRO THR TYR MET ASN LYS ARG VAL ILE VAL ASP SEQRES 15 F 252 ASP SER MET PRO VAL GLU THR LEU GLU ASP GLY THR LYS SEQRES 16 F 252 VAL PHE THR SER TYR LEU PHE GLY ALA GLY ALA LEU GLY SEQRES 17 F 252 TYR ALA GLU GLY GLN PRO GLU VAL PRO THR GLU THR ALA SEQRES 18 F 252 ARG ASN ALA LEU GLY SER GLN ASP ILE LEU ILE ASN ARG SEQRES 19 F 252 LYS HIS PHE VAL LEU HIS PRO ARG GLY VAL LYS PHE THR SEQRES 20 F 252 GLU ASN ALA MET ALA ATOM 1 CA ASP F 38 223.070 193.476 3.817 1.00159.84 ATOM 2 CA ASP F 39 221.459 191.529 6.573 1.00187.27 ATOM 3 CA GLU F 40 224.247 189.568 8.121 1.00179.98 ATOM 4 CA LEU F 41 222.937 190.744 11.444 1.00136.58 ATOM 5 CA ASN F 42 219.376 189.926 10.572 1.00 89.11 ATOM 6 CA ALA F 43 220.397 186.389 9.793 1.00 77.51 ATOM 7 CA LEU F 44 222.199 186.040 13.097 1.00140.33 ATOM 8 CA ALA F 45 220.134 184.528 15.809 1.00 41.19 ATOM 9 CA LYS F 46 217.717 186.749 17.581 1.00 76.12 ATOM 10 CA LYS F 47 216.370 186.545 21.065 1.00156.63 ATOM 11 CA ALA F 48 213.993 189.112 22.416 1.00221.99 ATOM 12 CA GLY F 49 214.753 190.343 25.854 1.00174.73 ATOM 13 CA GLY F 50 214.788 193.382 28.036 1.00203.94 ATOM 14 CA GLY F 51 217.355 195.003 30.275 1.00 71.27 ATOM 15 CA SER F 52 220.890 193.834 30.015 1.00187.96 ATOM 16 CA THR F 53 221.238 190.397 28.591 1.00 76.17 ATOM 17 CA LEU F 54 222.919 187.533 30.394 1.00 96.25 ATOM 18 CA ASN F 55 224.136 184.394 28.714 1.00 73.77 ATOM 19 CA MET F 56 226.171 181.483 29.872 1.00144.22 ATOM 20 CA PRO F 57 229.305 180.608 28.086 1.00159.42 ATOM 21 CA TYR F 58 231.210 177.413 28.570 1.00182.06 ATOM 22 CA TRP F 59 234.779 177.519 29.648 1.00100.60 ATOM 23 CA ASN F 60 237.267 174.924 28.723 1.00128.75 ATOM 24 CA ILE F 80 234.957 172.284 32.026 1.00266.61 ATOM 25 CA ASN F 81 232.948 174.948 33.692 1.00139.95 ATOM 26 CA ALA F 82 230.202 177.315 32.848 1.00 77.55 ATOM 27 CA GLY F 83 230.188 180.952 33.644 1.00 46.38 ATOM 28 CA GLN F 84 227.821 183.814 33.309 1.00 95.86 ATOM 29 CA ASP F 85 229.166 186.597 31.195 1.00115.37 ATOM 30 CA LYS F 86 227.480 189.929 31.321 1.00143.80 ATOM 31 CA ALA F 87 226.948 191.722 28.068 1.00 99.71 ATOM 32 CA VAL F 88 225.963 195.345 28.227 1.00144.90 ATOM 33 CA LEU F 89 223.392 196.751 25.892 1.00103.79 ATOM 34 CA ILE F 90 224.412 199.596 23.655 1.00149.12 ATOM 35 CA LEU F 91 222.428 202.063 21.633 1.00174.47 ATOM 36 CA ARG F 92 223.436 202.831 18.103 1.00254.67 ATOM 37 CA GLY F 93 221.747 205.366 15.959 1.00150.93 ATOM 38 CA ASN F 94 221.949 208.833 14.493 1.00204.15 ATOM 39 CA ALA F 95 219.419 211.421 13.627 1.00100.89 ATOM 40 CA TRP F 96 218.711 213.566 10.641 1.00175.73 ATOM 41 CA SER F 97 217.210 217.014 10.797 1.00110.12 ATOM 42 CA SER F 98 215.064 218.159 7.935 1.00126.44 ATOM 43 CA HIS F 99 213.080 221.235 7.182 1.00107.91 ATOM 44 CA ASP F 100 209.447 220.425 7.674 1.00 39.48 ATOM 45 CA LEU F 101 208.590 221.149 4.100 1.00 81.84 ATOM 46 CA ALA F 102 211.331 218.896 2.843 1.00 47.19 ATOM 47 CA ALA F 103 210.162 216.164 5.129 1.00 39.09 ATOM 48 CA THR F 104 206.679 216.442 3.742 1.00100.04 ATOM 49 CA LEU F 105 207.851 216.950 0.186 1.00 47.70 ATOM 50 CA SER F 106 210.055 213.904 0.353 1.00 91.02 ATOM 51 CA GLY F 107 210.598 211.209 1.211 1.00 32.56 ATOM 52 CA SER F 108 213.163 210.754 -1.460 1.00 47.68 ATOM 53 CA ASP F 109 215.451 211.229 1.439 1.00145.80 ATOM 54 CA PRO F 110 214.448 208.332 3.602 1.00 90.36 ATOM 55 CA MET F 111 215.399 205.874 0.977 1.00141.74 ATOM 56 CA GLN F 112 219.000 206.786 1.454 1.00 98.25 ATOM 57 CA ALA F 113 218.649 206.808 5.208 1.00 62.78 ATOM 58 CA ILE F 114 216.970 203.426 5.327 1.00113.73 ATOM 59 CA GLY F 115 219.410 201.790 2.967 1.00 40.52 ATOM 60 CA SER F 116 222.449 203.168 4.719 1.00125.99 ATOM 61 CA ARG F 117 221.226 202.374 8.186 1.00247.85 ATOM 62 CA VAL F 118 220.667 198.704 7.633 1.00100.76 ATOM 63 CA ALA F 119 224.055 197.985 6.101 1.00 95.16 ATOM 64 CA ALA F 120 225.908 200.189 8.487 1.00198.80 ATOM 65 CA TYR F 121 224.322 198.409 11.389 1.00369.42 ATOM 66 CA TRP F 122 225.151 195.103 9.928 1.00201.06 ATOM 67 CA ALA F 123 228.775 195.912 9.385 1.00199.00 ATOM 68 CA ARG F 124 228.960 197.232 12.933 1.00254.48 ATOM 69 CA GLU F 125 226.938 194.393 14.389 1.00239.18 ATOM 70 CA MET F 126 229.191 192.268 12.405 1.00207.18 ATOM 71 CA GLN F 127 232.007 194.232 14.001 1.00158.09 ATOM 72 CA LYS F 128 230.736 193.017 17.317 1.00260.35 ATOM 73 CA ILE F 129 230.687 189.421 16.198 1.00216.59 ATOM 74 CA VAL F 130 233.878 190.473 14.467 1.00371.69 ATOM 75 CA PHE F 131 236.650 191.824 16.439 1.00429.92 ATOM 76 CA ALA F 132 235.848 195.352 16.393 1.00275.96 ATOM 77 CA GLU F 133 235.481 198.348 18.585 1.00242.89 ATOM 78 CA LEU F 134 231.975 198.503 17.251 1.00472.55 ATOM 79 CA ALA F 135 231.888 202.057 18.472 1.00408.83 ATOM 80 CA GLY F 136 232.139 200.956 22.037 1.00627.65 ATOM 81 CA VAL F 137 234.492 199.363 24.443 1.00347.31 ATOM 82 CA PHE F 138 234.612 195.674 23.865 1.00319.51 ATOM 83 CA SER F 139 236.896 192.820 24.571 1.00204.60 ATOM 84 CA ASN F 140 239.002 191.971 21.611 1.00185.32 ATOM 85 CA ASP F 141 237.705 188.922 19.904 1.00182.73 ATOM 86 CA ASP F 142 240.099 186.026 19.875 1.00244.02 ATOM 87 CA MET F 143 238.851 184.272 16.759 1.00243.60 ATOM 88 CA LYS F 144 240.075 187.312 14.992 1.00469.18 ATOM 89 CA ASP F 145 243.438 186.367 16.247 1.00398.65 ATOM 90 CA ASN F 146 244.287 183.383 14.145 1.00317.41 ATOM 91 CA LYS F 147 241.102 183.988 12.253 1.00243.36 ATOM 92 CA LEU F 148 240.574 180.903 10.196 1.00339.83 ATOM 93 CA ASP F 149 240.355 182.596 6.863 1.00432.04 ATOM 94 CA ILE F 150 243.463 183.918 5.273 1.00208.85 ATOM 95 CA SER F 151 243.341 187.564 4.405 1.00524.89 ATOM 96 CA GLY F 152 242.293 188.312 0.891 1.00999.99 ATOM 97 CA THR F 153 245.128 189.394 -1.306 1.00577.91 ATOM 98 CA ALA F 154 245.653 193.102 -1.498 1.00376.86 ATOM 99 CA ASP F 155 246.028 194.892 -4.766 1.00291.29 ATOM 100 CA GLY F 156 245.272 192.650 -7.665 1.00428.68 ATOM 101 CA ILE F 157 242.095 190.717 -7.373 1.00453.01 ATOM 102 CA TYR F 158 242.433 187.633 -5.280 1.00370.94 ATOM 103 CA SER F 159 240.271 184.781 -4.184 1.00219.89 ATOM 104 CA ALA F 160 240.277 182.988 -7.444 1.00405.86 ATOM 105 CA GLU F 161 240.393 179.378 -6.451 1.00445.23 ATOM 106 CA THR F 162 240.513 180.775 -2.955 1.00384.75 ATOM 107 CA PHE F 163 236.703 180.811 -2.986 1.00245.43 ATOM 108 CA VAL F 164 236.478 177.116 -3.556 1.00275.90 ATOM 109 CA ASP F 165 239.158 176.727 -0.976 1.00377.49 ATOM 110 CA ALA F 166 237.177 178.720 1.497 1.00358.41 ATOM 111 CA SER F 167 234.289 176.377 1.136 1.00192.81 ATOM 112 CA TYR F 168 236.515 173.473 1.842 1.00236.83 ATOM 113 CA LYS F 169 238.024 175.228 4.845 1.00259.64 ATOM 114 CA LEU F 170 234.655 175.134 6.435 1.00224.72 ATOM 115 CA GLY F 171 234.774 171.336 6.289 1.00229.14 ATOM 116 CA ASP F 172 237.544 170.899 8.831 1.00211.44 ATOM 117 CA HIS F 173 235.437 172.700 11.366 1.00229.38 ATOM 118 CA GLU F 174 232.753 170.316 10.287 1.00131.22 ATOM 119 CA SER F 175 230.383 173.014 9.207 1.00135.70 ATOM 120 CA LEU F 176 230.419 174.801 5.916 1.00148.14 ATOM 121 CA LEU F 177 229.357 178.386 5.628 1.00337.17 ATOM 122 CA THR F 178 225.892 178.479 4.217 1.00256.49 ATOM 123 CA ALA F 179 226.547 180.909 1.547 1.00295.19 ATOM 124 CA ILE F 180 229.427 182.494 -0.348 1.00255.86 ATOM 125 CA GLY F 181 229.008 186.196 -0.730 1.00366.95 ATOM 126 CA MET F 182 231.155 187.679 -3.424 1.00283.34 ATOM 127 CA HIS F 183 231.032 190.819 -5.423 1.00391.36 ATOM 128 CA SER F 184 228.627 190.627 -8.277 1.00272.11 ATOM 129 CA ALA F 185 231.509 191.627 -10.429 1.00280.10 ATOM 130 CA THR F 186 233.451 188.485 -9.704 1.00331.38 ATOM 131 CA MET F 187 230.249 186.726 -10.228 1.00391.19 ATOM 132 CA ALA F 188 230.024 188.387 -13.564 1.00307.39 ATOM 133 CA SER F 189 233.541 187.517 -14.539 1.00374.05 ATOM 134 CA ALA F 190 232.972 183.985 -13.526 1.00439.56 ATOM 135 CA VAL F 191 229.851 183.908 -15.606 1.00362.54 ATOM 136 CA LYS F 192 231.945 185.248 -18.437 1.00354.28 ATOM 137 CA GLN F 193 234.111 182.202 -17.870 1.00267.86 ATOM 138 CA ASP F 194 235.776 181.031 -21.003 1.00293.54 ATOM 139 CA LEU F 195 236.609 177.685 -22.437 1.00415.86 ATOM 140 CA ILE F 196 239.185 177.255 -25.144 1.00491.81 ATOM 141 CA GLU F 197 237.959 179.507 -27.849 1.00464.66 ATOM 142 CA PHE F 198 235.749 181.568 -25.573 1.00467.22 ATOM 143 CA VAL F 199 232.775 179.338 -25.212 1.00505.45 ATOM 144 CA LYS F 200 230.832 179.991 -22.078 1.00677.63 ATOM 145 CA ASP F 201 231.355 177.565 -19.265 1.00644.75 ATOM 146 CA SER F 202 228.153 178.461 -17.555 1.00559.83 ATOM 147 CA GLN F 203 225.911 178.350 -20.546 1.00349.60 ATOM 148 CA SER F 204 225.605 178.325 -24.283 1.00483.63 ATOM 149 CA GLY F 205 227.052 181.428 -25.985 1.00725.56 ATOM 150 CA ILE F 206 224.030 183.441 -26.765 1.00734.97 ATOM 151 CA ARG F 207 224.147 184.910 -23.339 1.00867.09 ATOM 152 CA PHE F 208 225.798 184.675 -19.960 1.00521.69 ATOM 153 CA PRO F 209 224.477 182.438 -17.210 1.00424.62 ATOM 154 CA THR F 210 223.127 183.270 -13.766 1.00378.92 ATOM 155 CA TYR F 211 225.371 183.475 -10.728 1.00461.89 ATOM 156 CA MET F 212 225.400 180.052 -9.174 1.00537.15 ATOM 157 CA ASN F 213 228.756 178.339 -8.658 1.00501.13 ATOM 158 CA LYS F 214 229.574 174.817 -7.768 1.00474.24 ATOM 159 CA ARG F 215 229.248 175.027 -4.022 1.00267.53 ATOM 160 CA VAL F 216 226.649 175.874 -1.489 1.00207.03 ATOM 161 CA ILE F 217 224.402 178.649 -2.661 1.00222.73 ATOM 162 CA VAL F 218 226.076 181.816 -3.848 1.00330.82 ATOM 163 CA ASP F 219 225.116 185.336 -2.872 1.00239.69 ATOM 164 CA ASP F 220 226.508 188.065 -4.989 1.00310.03 ATOM 165 CA SER F 221 225.987 191.665 -4.284 1.00217.70 ATOM 166 CA MET F 222 227.735 194.881 -5.158 1.00200.00 ATOM 167 CA PRO F 223 228.460 195.757 -1.585 1.00221.75 ATOM 168 CA VAL F 224 231.213 193.205 -1.451 1.00246.32 ATOM 169 CA GLU F 225 234.042 194.866 -3.242 1.00308.81 ATOM 170 CA THR F 226 235.253 193.091 -6.213 1.00150.75 ATOM 171 CA LEU F 227 238.795 192.014 -6.732 1.00259.22 ATOM 172 CA GLU F 228 239.596 192.247 -3.051 1.00304.73 ATOM 173 CA ASP F 229 240.112 195.895 -3.281 1.00153.20 ATOM 174 CA GLY F 230 238.890 197.222 -0.067 1.00104.63 ATOM 175 CA THR F 231 236.929 194.055 0.488 1.00251.00 ATOM 176 CA LYS F 232 239.387 191.434 1.526 1.00250.81 ATOM 177 CA VAL F 233 240.771 189.555 4.464 1.00229.09 ATOM 178 CA PHE F 234 239.128 186.347 3.473 1.00284.43 ATOM 179 CA THR F 235 237.371 184.549 0.695 1.00541.75 ATOM 180 CA SER F 236 234.298 184.477 2.799 1.00231.67 ATOM 181 CA TYR F 237 233.060 185.390 6.198 1.00301.47 ATOM 182 CA LEU F 238 232.963 182.112 7.649 1.00227.63 ATOM 183 CA PHE F 239 229.274 181.844 7.850 1.00299.83 ATOM 184 CA GLY F 240 227.747 180.348 10.930 1.00365.81 ATOM 185 CA ALA F 241 225.764 181.191 13.975 1.00156.23 ATOM 186 CA GLY F 242 228.760 180.203 15.972 1.00167.00 ATOM 187 CA ALA F 243 230.707 182.967 14.270 1.00215.89 ATOM 188 CA LEU F 244 227.802 185.322 13.759 1.00201.33 ATOM 189 CA GLY F 245 226.892 185.623 17.375 1.00136.14 ATOM 190 CA TYR F 246 223.515 186.072 18.922 1.00 77.70 ATOM 191 CA ALA F 247 221.649 189.308 18.951 1.00 81.82 ATOM 192 CA GLU F 248 219.503 190.235 21.848 1.00 55.95 ATOM 193 CA GLY F 249 217.420 193.206 21.073 1.00183.19 ATOM 194 CA GLN F 250 215.125 195.087 23.299 1.00106.79 ATOM 195 CA PRO F 251 214.282 197.642 20.690 1.00122.31 ATOM 196 CA GLU F 252 213.949 197.306 16.965 1.00140.72 ATOM 197 CA VAL F 253 215.682 199.666 14.608 1.00287.09 ATOM 198 CA PRO F 254 213.210 202.428 14.423 1.00165.28 ATOM 199 CA THR F 255 213.016 205.104 11.845 1.00118.56 ATOM 200 CA GLU F 256 210.807 207.742 13.253 1.00125.84 ATOM 201 CA THR F 257 210.377 211.365 12.679 1.00169.35 ATOM 202 CA ALA F 258 209.284 213.736 15.405 1.00116.21 ATOM 203 CA ARG F 259 207.506 216.967 14.649 1.00 60.24 ATOM 204 CA ASN F 260 208.003 218.440 18.053 1.00216.59 ATOM 205 CA ALA F 261 211.553 217.936 19.178 1.00116.27 ATOM 206 CA LEU F 262 213.583 220.828 20.473 1.00205.59 ATOM 207 CA GLY F 263 212.084 223.915 18.998 1.00192.58 ATOM 208 CA SER F 264 211.330 221.898 15.923 1.00 58.52 ATOM 209 CA GLN F 265 207.699 222.845 15.933 1.00 81.17 ATOM 210 CA ASP F 266 208.426 226.513 16.211 1.00 36.79 ATOM 211 CA ILE F 267 210.540 226.367 13.145 1.00177.15 ATOM 212 CA LEU F 268 209.535 224.056 10.499 1.00 99.04 ATOM 213 CA ILE F 269 211.749 221.125 10.957 1.00142.80 ATOM 214 CA ASN F 270 211.366 217.470 11.608 1.00168.10 ATOM 215 CA ARG F 271 213.941 215.169 13.058 1.00113.41 ATOM 216 CA LYS F 272 214.246 211.727 11.656 1.00133.30 ATOM 217 CA HIS F 273 215.807 209.314 14.069 1.00 88.02 ATOM 218 CA PHE F 274 217.398 206.051 13.193 1.00226.35 ATOM 219 CA VAL F 275 218.309 203.853 16.045 1.00147.71 ATOM 220 CA LEU F 276 218.650 200.404 17.377 1.00149.38 ATOM 221 CA HIS F 277 219.147 199.145 20.883 1.00249.84 ATOM 222 CA PRO F 278 220.686 195.798 21.453 1.00179.37 ATOM 223 CA ARG F 279 223.333 193.645 22.996 1.00189.45 ATOM 224 CA GLY F 280 225.500 191.324 21.042 1.00135.80 ATOM 225 CA VAL F 281 226.765 188.202 22.495 1.00150.33 ATOM 226 CA LYS F 282 229.644 186.476 20.804 1.00214.16 ATOM 227 CA PHE F 283 229.506 182.747 20.447 1.00204.19 ATOM 228 CA THR F 284 232.522 180.628 19.749 1.00204.18 ATOM 229 CA GLU F 285 233.134 182.716 16.668 1.00323.01 ATOM 230 CA ASN F 286 235.617 182.478 13.847 1.00322.54 ATOM 231 CA ALA F 287 232.741 181.025 11.938 1.00283.49 ATOM 232 CA MET F 288 233.384 184.254 10.067 1.00173.09 ATOM 233 CA ALA F 289 235.965 186.059 7.714 1.00272.52 TER