HEADER VIRAL PROTEIN 02-MAY-14 4D1K TITLE Cryo-electron microscopy of tubular arrays of HIV-1 Gag resolves TITLE 2 structures essential for immature virus assembly. COMPND MOL_ID: 1; COMPND 2 MOLECULE: GAG PROTEIN; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 MUTATION: YES; COMPND 5 FRAGMENT: CAPSID, RESIDUES ; COMPND 6 ENGINEERED: YES; COMPND 7 10NM PROTEIN-A CONJUGATED GOLD PARTICLES WERE ADDED TO THE SAMPLE. COMPND 8 OTHER_DETAILS: PROTEIN CONSTRUCT CONSISTS OF CA TO NC DOMAINS WITH MUTATION IN COMPND 9 POSITION Y169.; EXPDTA ELECTRON MICROSCOPY DBREF 4D1K A 1 219 UNP Q5D0H3 Q5D0H3_9HIV 1 219 SEQRES 1 A 72 THR SER ILE LEU ASP ILE ARG GLN GLY PRO LYS GLU PRO SEQRES 2 A 72 PHE ARG ASP TYR VAL ASP ARG PHE SER LYS THR LEU ARG SEQRES 3 A 72 ALA GLU GLN ALA SER GLN GLU VAL LYS ASN TRP MET THR SEQRES 4 A 72 GLU THR LEU LEU VAL GLN ASN ALA ASN PRO ASP CYS LYS SEQRES 5 A 72 THR ILE LEU LYS ALA LEU GLY PRO GLY ALA THR LEU GLU SEQRES 6 A 72 GLU MET MET THR ALA CYS GLN ATOM 1 N THR A 148 60.563 58.029 88.749 1.00 0.00 ATOM 2 CA THR A 148 59.960 56.757 88.293 1.00 0.00 ATOM 3 C THR A 148 60.039 56.470 86.843 1.00 0.00 ATOM 4 N SER A 149 60.078 55.180 86.444 1.00 0.00 ATOM 5 CA SER A 149 59.712 54.646 85.179 1.00 0.00 ATOM 6 C SER A 149 60.872 54.642 84.215 1.00 0.00 ATOM 7 N ILE A 150 61.376 53.439 83.981 1.00 0.00 ATOM 8 CA ILE A 150 62.400 53.155 83.009 1.00 0.00 ATOM 9 C ILE A 150 61.983 53.488 81.633 1.00 0.00 ATOM 10 N LEU A 151 60.776 53.014 81.210 1.00 0.00 ATOM 11 CA LEU A 151 60.089 53.410 80.000 1.00 0.00 ATOM 12 C LEU A 151 59.908 54.873 79.656 1.00 0.00 ATOM 13 N ASP A 152 60.054 55.834 80.690 1.00 0.00 ATOM 14 CA ASP A 152 60.051 57.248 80.421 1.00 0.00 ATOM 15 C ASP A 152 61.395 57.841 80.288 1.00 0.00 ATOM 16 N ILE A 153 62.435 57.023 80.209 1.00 0.00 ATOM 17 CA ILE A 153 63.815 57.499 79.928 1.00 0.00 ATOM 18 C ILE A 153 63.927 57.768 78.400 1.00 0.00 ATOM 19 N ARG A 154 63.763 59.069 77.949 1.00 0.00 ATOM 20 CA ARG A 154 63.854 59.252 76.513 1.00 0.00 ATOM 21 C ARG A 154 64.732 60.323 76.260 1.00 0.00 ATOM 22 N GLN A 155 65.300 60.480 75.106 1.00 0.00 ATOM 23 CA GLN A 155 66.254 61.547 74.840 1.00 0.00 ATOM 24 C GLN A 155 65.723 62.777 74.087 1.00 0.00 ATOM 25 N GLY A 156 66.472 63.952 74.141 1.00 0.00 ATOM 26 CA GLY A 156 66.195 65.129 73.287 1.00 0.00 ATOM 27 C GLY A 156 66.644 64.911 71.850 1.00 0.00 ATOM 28 N PRO A 157 66.440 65.878 70.914 1.00 0.00 ATOM 29 CA PRO A 157 66.804 65.703 69.563 1.00 0.00 ATOM 30 C PRO A 157 68.255 65.713 69.164 1.00 0.00 ATOM 31 N LYS A 158 69.122 65.988 70.112 1.00 0.00 ATOM 32 CA LYS A 158 70.544 66.218 69.801 1.00 0.00 ATOM 33 C LYS A 158 71.458 65.712 70.950 1.00 0.00 ATOM 34 N GLU A 159 71.020 64.623 71.526 1.00 0.00 ATOM 35 CA GLU A 159 71.531 64.223 72.846 1.00 0.00 ATOM 36 C GLU A 159 72.466 62.958 72.882 1.00 0.00 ATOM 37 N PRO A 160 73.427 62.782 73.808 1.00 0.00 ATOM 38 CA PRO A 160 74.363 61.569 73.828 1.00 0.00 ATOM 39 C PRO A 160 73.879 60.254 74.368 1.00 0.00 ATOM 40 N PHE A 161 74.151 59.164 73.677 1.00 0.00 ATOM 41 CA PHE A 161 73.835 57.772 74.049 1.00 0.00 ATOM 42 C PHE A 161 74.424 57.306 75.397 1.00 0.00 ATOM 43 N ARG A 162 75.688 57.607 75.658 1.00 0.00 ATOM 44 CA ARG A 162 76.399 57.096 76.857 1.00 0.00 ATOM 45 C ARG A 162 75.809 57.497 78.182 1.00 0.00 ATOM 46 N ASP A 163 75.284 58.749 78.160 1.00 0.00 ATOM 47 CA ASP A 163 74.590 59.468 79.130 1.00 0.00 ATOM 48 C ASP A 163 73.223 59.000 79.236 1.00 0.00 ATOM 49 N TYR A 164 72.601 58.673 78.095 1.00 0.00 ATOM 50 CA TYR A 164 71.294 58.115 78.032 1.00 0.00 ATOM 51 C TYR A 164 71.261 56.677 78.648 1.00 0.00 ATOM 52 N VAL A 165 72.300 55.835 78.347 1.00 0.00 ATOM 53 CA VAL A 165 72.477 54.516 79.011 1.00 0.00 ATOM 54 C VAL A 165 72.615 54.722 80.565 1.00 0.00 ATOM 55 N ASP A 166 73.326 55.780 81.046 1.00 0.00 ATOM 56 CA ASP A 166 73.331 56.096 82.463 1.00 0.00 ATOM 57 C ASP A 166 71.988 56.472 83.048 1.00 0.00 ATOM 58 N ARG A 167 71.233 57.356 82.449 1.00 0.00 ATOM 59 CA ARG A 167 69.915 57.647 82.984 1.00 0.00 ATOM 60 C ARG A 167 69.091 56.397 82.926 1.00 0.00 ATOM 61 N PHE A 168 69.070 55.624 81.793 1.00 0.00 ATOM 62 CA PHE A 168 68.317 54.410 81.579 1.00 0.00 ATOM 63 C PHE A 168 68.622 53.279 82.553 1.00 0.00 ATOM 64 N SER A 169 69.897 52.971 82.797 1.00 0.00 ATOM 65 CA SER A 169 70.406 51.988 83.699 1.00 0.00 ATOM 66 C SER A 169 70.153 52.250 85.189 1.00 0.00 ATOM 67 N LYS A 170 70.497 53.487 85.600 1.00 0.00 ATOM 68 CA LYS A 170 70.296 53.926 86.974 1.00 0.00 ATOM 69 C LYS A 170 68.862 53.950 87.326 1.00 0.00 ATOM 70 N THR A 171 67.939 54.408 86.358 1.00 0.00 ATOM 71 CA THR A 171 66.537 54.361 86.622 1.00 0.00 ATOM 72 C THR A 171 65.952 52.977 86.869 1.00 0.00 ATOM 73 N LEU A 172 66.421 52.041 86.033 1.00 0.00 ATOM 74 CA LEU A 172 66.213 50.605 85.967 1.00 0.00 ATOM 75 C LEU A 172 66.641 49.828 87.225 1.00 0.00 ATOM 76 N ARG A 173 67.731 50.173 87.934 1.00 0.00 ATOM 77 CA ARG A 173 68.124 49.706 89.214 1.00 0.00 ATOM 78 C ARG A 173 67.183 50.264 90.402 1.00 0.00 ATOM 79 N ALA A 174 66.703 51.515 90.353 1.00 0.00 ATOM 80 CA ALA A 174 65.887 52.144 91.336 1.00 0.00 ATOM 81 C ALA A 174 64.436 51.665 91.227 1.00 0.00 ATOM 82 N GLU A 175 64.127 51.003 90.052 1.00 0.00 ATOM 83 CA GLU A 175 62.824 50.561 89.724 1.00 0.00 ATOM 84 C GLU A 175 62.930 49.089 90.205 1.00 0.00 ATOM 85 N GLN A 176 61.967 48.735 91.068 1.00 0.00 ATOM 86 CA GLN A 176 62.084 47.384 91.715 1.00 0.00 ATOM 87 C GLN A 176 61.746 46.245 90.792 1.00 0.00 ATOM 88 N ALA A 177 60.567 46.304 90.046 1.00 0.00 ATOM 89 CA ALA A 177 60.120 45.305 89.092 1.00 0.00 ATOM 90 C ALA A 177 60.622 43.866 89.227 1.00 0.00 ATOM 91 N SER A 178 61.264 43.272 88.201 1.00 0.00 ATOM 92 CA SER A 178 61.872 41.942 88.134 1.00 0.00 ATOM 93 C SER A 178 62.763 41.934 86.917 1.00 0.00 ATOM 94 N GLN A 179 63.584 40.957 86.800 1.00 0.00 ATOM 95 CA GLN A 179 64.523 40.855 85.729 1.00 0.00 ATOM 96 C GLN A 179 64.041 40.674 84.270 1.00 0.00 ATOM 97 N GLU A 180 62.965 39.924 84.149 1.00 0.00 ATOM 98 CA GLU A 180 62.356 39.619 82.892 1.00 0.00 ATOM 99 C GLU A 180 61.766 40.833 82.293 1.00 0.00 ATOM 100 N VAL A 181 61.209 41.622 83.213 1.00 0.00 ATOM 101 CA VAL A 181 60.738 42.938 82.887 1.00 0.00 ATOM 102 C VAL A 181 61.887 43.820 82.418 1.00 0.00 ATOM 103 N LYS A 182 63.035 43.747 83.176 1.00 0.00 ATOM 104 CA LYS A 182 64.187 44.529 82.879 1.00 0.00 ATOM 105 C LYS A 182 64.960 44.299 81.551 1.00 0.00 ATOM 106 N ASN A 183 65.156 43.086 81.068 1.00 0.00 ATOM 107 CA ASN A 183 65.641 42.847 79.754 1.00 0.00 ATOM 108 C ASN A 183 64.626 43.228 78.711 1.00 0.00 ATOM 109 N TRP A 184 63.326 42.942 78.861 1.00 0.00 ATOM 110 CA TRP A 184 62.415 43.430 77.882 1.00 0.00 ATOM 111 C TRP A 184 62.287 44.977 77.780 1.00 0.00 ATOM 112 N MET A 185 62.294 45.616 78.882 1.00 0.00 ATOM 113 CA MET A 185 62.453 47.081 78.901 1.00 0.00 ATOM 114 C MET A 185 63.840 47.541 78.140 1.00 0.00 ATOM 115 N THR A 186 64.944 46.863 78.412 1.00 0.00 ATOM 116 CA THR A 186 66.219 47.226 77.843 1.00 0.00 ATOM 117 C THR A 186 66.171 47.008 76.325 1.00 0.00 ATOM 118 N GLU A 187 65.807 45.757 75.810 1.00 0.00 ATOM 119 CA GLU A 187 65.828 45.460 74.412 1.00 0.00 ATOM 120 C GLU A 187 64.759 46.295 73.641 1.00 0.00 ATOM 121 N THR A 188 63.587 46.694 74.226 1.00 0.00 ATOM 122 CA THR A 188 62.613 47.535 73.497 1.00 0.00 ATOM 123 C THR A 188 62.897 49.023 73.607 1.00 0.00 ATOM 124 N LEU A 189 63.007 49.487 74.821 1.00 0.00 ATOM 125 CA LEU A 189 62.889 50.892 75.144 1.00 0.00 ATOM 126 C LEU A 189 64.157 51.679 74.919 1.00 0.00 ATOM 127 N LEU A 190 65.335 51.031 75.063 1.00 0.00 ATOM 128 CA LEU A 190 66.661 51.656 74.859 1.00 0.00 ATOM 129 C LEU A 190 66.676 52.085 73.360 1.00 0.00 ATOM 130 N VAL A 191 66.230 51.250 72.428 1.00 0.00 ATOM 131 CA VAL A 191 66.204 51.517 71.016 1.00 0.00 ATOM 132 C VAL A 191 65.118 52.490 70.593 1.00 0.00 ATOM 133 N GLN A 192 63.916 52.375 71.247 1.00 0.00 ATOM 134 CA GLN A 192 62.762 53.198 70.907 1.00 0.00 ATOM 135 C GLN A 192 62.964 54.645 71.392 1.00 0.00 ATOM 136 N ASN A 193 63.511 54.841 72.560 1.00 0.00 ATOM 137 CA ASN A 193 63.424 56.160 73.235 1.00 0.00 ATOM 138 C ASN A 193 64.731 56.927 72.946 1.00 0.00 ATOM 139 N ALA A 194 65.612 56.443 72.097 1.00 0.00 ATOM 140 CA ALA A 194 66.898 57.073 71.767 1.00 0.00 ATOM 141 C ALA A 194 66.690 58.363 71.058 1.00 0.00 ATOM 142 N ASN A 195 67.714 59.273 71.065 1.00 0.00 ATOM 143 CA ASN A 195 67.774 60.507 70.330 1.00 0.00 ATOM 144 C ASN A 195 67.704 60.234 68.846 1.00 0.00 ATOM 145 N PRO A 196 67.210 61.123 67.973 1.00 0.00 ATOM 146 CA PRO A 196 66.902 60.633 66.577 1.00 0.00 ATOM 147 C PRO A 196 68.170 60.158 65.916 1.00 0.00 ATOM 148 N ASP A 197 69.261 60.926 66.047 1.00 0.00 ATOM 149 CA ASP A 197 70.567 60.512 65.578 1.00 0.00 ATOM 150 C ASP A 197 71.160 59.232 66.215 1.00 0.00 ATOM 151 N CYS A 198 71.112 59.026 67.493 1.00 0.00 ATOM 152 CA CYS A 198 71.287 57.822 68.233 1.00 0.00 ATOM 153 C CYS A 198 70.363 56.683 67.898 1.00 0.00 ATOM 154 N LYS A 199 69.009 56.892 67.742 1.00 0.00 ATOM 155 CA LYS A 199 68.040 55.943 67.356 1.00 0.00 ATOM 156 C LYS A 199 68.250 55.402 66.037 1.00 0.00 ATOM 157 N THR A 200 68.640 56.161 65.060 1.00 0.00 ATOM 158 CA THR A 200 68.982 55.697 63.690 1.00 0.00 ATOM 159 C THR A 200 70.112 54.691 63.866 1.00 0.00 ATOM 160 N ILE A 201 71.134 55.044 64.670 1.00 0.00 ATOM 161 CA ILE A 201 72.223 54.097 65.040 1.00 0.00 ATOM 162 C ILE A 201 71.840 52.809 65.747 1.00 0.00 ATOM 163 N LEU A 202 70.950 52.899 66.763 1.00 0.00 ATOM 164 CA LEU A 202 70.470 51.718 67.536 1.00 0.00 ATOM 165 C LEU A 202 69.593 50.784 66.746 1.00 0.00 ATOM 166 N LYS A 203 68.753 51.350 65.855 1.00 0.00 ATOM 167 CA LYS A 203 67.971 50.534 64.982 1.00 0.00 ATOM 168 C LYS A 203 68.852 49.881 64.007 1.00 0.00 ATOM 169 N ALA A 204 69.773 50.606 63.459 1.00 0.00 ATOM 170 CA ALA A 204 70.794 50.008 62.653 1.00 0.00 ATOM 171 C ALA A 204 71.605 48.874 63.255 1.00 0.00 ATOM 172 N LEU A 205 72.078 49.076 64.515 1.00 0.00 ATOM 173 CA LEU A 205 72.764 48.040 65.295 1.00 0.00 ATOM 174 C LEU A 205 71.862 46.859 65.617 1.00 0.00 ATOM 175 N GLY A 206 70.659 47.168 66.046 1.00 0.00 ATOM 176 CA GLY A 206 69.639 46.226 66.419 1.00 0.00 ATOM 177 C GLY A 206 69.682 45.814 67.875 1.00 0.00 ATOM 178 N PRO A 207 68.651 45.466 68.580 1.00 0.00 ATOM 179 CA PRO A 207 68.705 45.136 69.992 1.00 0.00 ATOM 180 C PRO A 207 69.494 43.912 70.226 1.00 0.00 ATOM 181 N GLY A 208 69.840 43.118 69.227 1.00 0.00 ATOM 182 CA GLY A 208 70.817 42.095 69.256 1.00 0.00 ATOM 183 C GLY A 208 72.216 42.411 69.688 1.00 0.00 ATOM 184 N ALA A 209 72.763 43.533 69.162 1.00 0.00 ATOM 185 CA ALA A 209 74.119 44.075 69.405 1.00 0.00 ATOM 186 C ALA A 209 74.332 44.433 70.918 1.00 0.00 ATOM 187 N THR A 210 75.492 44.228 71.519 1.00 0.00 ATOM 188 CA THR A 210 75.744 44.443 72.918 1.00 0.00 ATOM 189 C THR A 210 75.989 45.919 73.218 1.00 0.00 ATOM 190 N LEU A 211 76.061 46.286 74.554 1.00 0.00 ATOM 191 CA LEU A 211 76.156 47.710 74.922 1.00 0.00 ATOM 192 C LEU A 211 77.490 48.310 74.640 1.00 0.00 ATOM 193 N GLU A 212 78.606 47.582 74.842 1.00 0.00 ATOM 194 CA GLU A 212 79.842 47.866 74.259 1.00 0.00 ATOM 195 C GLU A 212 79.849 48.106 72.744 1.00 0.00 ATOM 196 N GLU A 213 79.186 47.190 71.882 1.00 0.00 ATOM 197 CA GLU A 213 78.898 47.506 70.528 1.00 0.00 ATOM 198 C GLU A 213 78.158 48.812 70.146 1.00 0.00 ATOM 199 N MET A 214 77.052 49.100 70.916 1.00 0.00 ATOM 200 CA MET A 214 76.245 50.306 70.816 1.00 0.00 ATOM 201 C MET A 214 77.063 51.550 71.263 1.00 0.00 ATOM 202 N MET A 215 77.933 51.545 72.277 1.00 0.00 ATOM 203 CA MET A 215 78.769 52.628 72.719 1.00 0.00 ATOM 204 C MET A 215 79.911 52.934 71.751 1.00 0.00 ATOM 205 N THR A 216 80.557 51.917 71.150 1.00 0.00 ATOM 206 CA THR A 216 81.538 52.123 70.084 1.00 0.00 ATOM 207 C THR A 216 80.838 52.777 68.887 1.00 0.00 ATOM 208 N ALA A 217 79.604 52.291 68.559 1.00 0.00 ATOM 209 CA ALA A 217 78.769 52.755 67.450 1.00 0.00 ATOM 210 C ALA A 217 78.236 54.215 67.594 1.00 0.00 ATOM 211 N CYS A 218 77.977 54.592 68.895 1.00 0.00 ATOM 212 CA CYS A 218 77.338 55.927 69.129 1.00 0.00 ATOM 213 C CYS A 218 78.394 56.943 69.384 1.00 0.00 ATOM 214 N GLN A 219 79.658 56.576 69.221 1.00 0.00 ATOM 215 CA GLN A 219 80.749 57.613 69.401 1.00 0.00 ATOM 216 C GLN A 219 81.584 57.876 68.174 1.00 0.00 TER