HEADER VIRAL PROTEIN 02-MAY-14 4D1K TITLE Cryo-electron microscopy of tubular arrays of HIV-1 Gag resolves TITLE 2 structures essential for immature virus assembly. COMPND MOL_ID: 1; COMPND 2 MOLECULE: GAG PROTEIN; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 MUTATION: YES; COMPND 5 FRAGMENT: CAPSID, RESIDUES ; COMPND 6 ENGINEERED: YES; COMPND 7 10NM PROTEIN-A CONJUGATED GOLD PARTICLES WERE ADDED TO THE SAMPLE. COMPND 8 OTHER_DETAILS: PROTEIN CONSTRUCT CONSISTS OF CA TO NC DOMAINS WITH MUTATION IN COMPND 9 POSITION Y169.; EXPDTA ELECTRON MICROSCOPY DBREF 4D1K C 1 219 UNP Q5D0H3 Q5D0H3_9HIV 1 219 SEQRES 1 C 73 PRO THR SER ILE LEU ASP ILE ARG GLN GLY PRO LYS GLU SEQRES 2 C 73 PRO PHE ARG ASP TYR VAL ASP ARG PHE SER LYS THR LEU SEQRES 3 C 73 ARG ALA GLU GLN ALA SER GLN GLU VAL LYS ASN TRP MET SEQRES 4 C 73 THR GLU THR LEU LEU VAL GLN ASN ALA ASN PRO ASP CYS SEQRES 5 C 73 LYS THR ILE LEU LYS ALA LEU GLY PRO GLY ALA THR LEU SEQRES 6 C 73 GLU GLU MET MET THR ALA CYS GLN ATOM 1 N PRO C 147 66.854 100.620 92.780 1.00 0.00 ATOM 2 CA PRO C 147 67.553 99.814 91.788 1.00 0.00 ATOM 3 C PRO C 147 66.734 99.548 90.466 1.00 0.00 ATOM 4 N THR C 148 67.427 99.247 89.341 1.00 0.00 ATOM 5 CA THR C 148 66.990 98.917 88.027 1.00 0.00 ATOM 6 C THR C 148 66.060 99.867 87.261 1.00 0.00 ATOM 7 N SER C 149 66.163 99.758 85.915 1.00 0.00 ATOM 8 CA SER C 149 65.480 100.636 84.947 1.00 0.00 ATOM 9 C SER C 149 65.426 99.803 83.695 1.00 0.00 ATOM 10 N ILE C 150 64.410 100.082 82.885 1.00 0.00 ATOM 11 CA ILE C 150 63.982 99.300 81.709 1.00 0.00 ATOM 12 C ILE C 150 64.920 99.224 80.478 1.00 0.00 ATOM 13 N LEU C 151 65.494 100.336 80.094 1.00 0.00 ATOM 14 CA LEU C 151 66.384 100.487 78.989 1.00 0.00 ATOM 15 C LEU C 151 67.653 99.626 78.989 1.00 0.00 ATOM 16 N ASP C 152 68.138 99.174 80.163 1.00 0.00 ATOM 17 CA ASP C 152 69.336 98.301 80.246 1.00 0.00 ATOM 18 C ASP C 152 69.170 96.988 79.533 1.00 0.00 ATOM 19 N ILE C 153 67.876 96.566 79.458 1.00 0.00 ATOM 20 CA ILE C 153 67.517 95.295 78.897 1.00 0.00 ATOM 21 C ILE C 153 67.402 95.343 77.468 1.00 0.00 ATOM 22 N ARG C 154 68.333 94.719 76.696 1.00 0.00 ATOM 23 CA ARG C 154 68.325 94.574 75.253 1.00 0.00 ATOM 24 C ARG C 154 68.602 93.094 74.972 1.00 0.00 ATOM 25 N GLN C 155 68.306 92.648 73.807 1.00 0.00 ATOM 26 CA GLN C 155 68.344 91.281 73.543 1.00 0.00 ATOM 27 C GLN C 155 69.538 90.821 72.677 1.00 0.00 ATOM 28 N GLY C 156 70.161 89.709 73.056 1.00 0.00 ATOM 29 CA GLY C 156 71.326 89.117 72.359 1.00 0.00 ATOM 30 C GLY C 156 71.021 88.349 71.071 1.00 0.00 ATOM 31 N PRO C 157 72.038 87.948 70.307 1.00 0.00 ATOM 32 CA PRO C 157 71.906 87.383 68.970 1.00 0.00 ATOM 33 C PRO C 157 71.488 85.943 69.088 1.00 0.00 ATOM 34 N LYS C 158 71.913 85.176 70.126 1.00 0.00 ATOM 35 CA LYS C 158 71.595 83.758 70.279 1.00 0.00 ATOM 36 C LYS C 158 70.587 83.570 71.456 1.00 0.00 ATOM 37 N GLU C 159 69.867 84.701 71.768 1.00 0.00 ATOM 38 CA GLU C 159 69.004 84.767 72.950 1.00 0.00 ATOM 39 C GLU C 159 67.521 84.670 72.586 1.00 0.00 ATOM 40 N PRO C 160 66.663 83.729 72.950 1.00 0.00 ATOM 41 CA PRO C 160 65.230 83.741 72.643 1.00 0.00 ATOM 42 C PRO C 160 64.487 85.033 72.920 1.00 0.00 ATOM 43 N PHE C 161 63.456 85.327 72.120 1.00 0.00 ATOM 44 CA PHE C 161 62.653 86.451 72.425 1.00 0.00 ATOM 45 C PHE C 161 62.009 86.344 73.872 1.00 0.00 ATOM 46 N ARG C 162 61.487 85.119 74.256 1.00 0.00 ATOM 47 CA ARG C 162 60.933 84.780 75.581 1.00 0.00 ATOM 48 C ARG C 162 61.956 85.026 76.726 1.00 0.00 ATOM 49 N ASP C 163 63.266 84.774 76.476 1.00 0.00 ATOM 50 CA ASP C 163 64.270 85.061 77.550 1.00 0.00 ATOM 51 C ASP C 163 64.463 86.543 77.721 1.00 0.00 ATOM 52 N TYR C 164 64.468 87.328 76.615 1.00 0.00 ATOM 53 CA TYR C 164 64.533 88.778 76.590 1.00 0.00 ATOM 54 C TYR C 164 63.238 89.336 77.287 1.00 0.00 ATOM 55 N VAL C 165 62.029 88.805 76.924 1.00 0.00 ATOM 56 CA VAL C 165 60.771 89.282 77.493 1.00 0.00 ATOM 57 C VAL C 165 60.710 88.990 78.981 1.00 0.00 ATOM 58 N ASP C 166 61.315 87.952 79.555 1.00 0.00 ATOM 59 CA ASP C 166 61.268 87.740 80.973 1.00 0.00 ATOM 60 C ASP C 166 62.009 88.767 81.757 1.00 0.00 ATOM 61 N ARG C 167 63.196 89.117 81.213 1.00 0.00 ATOM 62 CA ARG C 167 63.980 90.140 81.809 1.00 0.00 ATOM 63 C ARG C 167 63.224 91.490 81.771 1.00 0.00 ATOM 64 N PHE C 168 62.608 91.729 80.602 1.00 0.00 ATOM 65 CA PHE C 168 61.769 92.913 80.337 1.00 0.00 ATOM 66 C PHE C 168 60.535 93.044 81.277 1.00 0.00 ATOM 67 N SER C 169 59.793 91.957 81.383 1.00 0.00 ATOM 68 CA SER C 169 58.501 91.928 82.113 1.00 0.00 ATOM 69 C SER C 169 58.732 92.178 83.595 1.00 0.00 ATOM 70 N LYS C 170 59.693 91.501 84.180 1.00 0.00 ATOM 71 CA LYS C 170 60.151 91.719 85.521 1.00 0.00 ATOM 72 C LYS C 170 60.783 93.057 85.775 1.00 0.00 ATOM 73 N THR C 171 61.629 93.521 84.797 1.00 0.00 ATOM 74 CA THR C 171 62.240 94.845 84.929 1.00 0.00 ATOM 75 C THR C 171 61.360 96.008 84.942 1.00 0.00 ATOM 76 N LEU C 172 60.364 95.912 84.105 1.00 0.00 ATOM 77 CA LEU C 172 59.359 96.919 83.960 1.00 0.00 ATOM 78 C LEU C 172 58.416 97.110 85.164 1.00 0.00 ATOM 79 N ARG C 173 58.218 95.961 85.908 1.00 0.00 ATOM 80 CA ARG C 173 57.489 96.055 87.127 1.00 0.00 ATOM 81 C ARG C 173 58.214 96.773 88.262 1.00 0.00 ATOM 82 N ALA C 174 59.596 96.696 88.234 1.00 0.00 ATOM 83 CA ALA C 174 60.548 97.428 89.027 1.00 0.00 ATOM 84 C ALA C 174 60.991 98.803 88.533 1.00 0.00 ATOM 85 N GLU C 175 60.848 99.149 87.232 1.00 0.00 ATOM 86 CA GLU C 175 60.998 100.571 86.712 1.00 0.00 ATOM 87 C GLU C 175 60.020 101.599 87.428 1.00 0.00 ATOM 88 N GLN C 176 60.377 102.897 87.528 1.00 0.00 ATOM 89 CA GLN C 176 59.464 103.796 88.236 1.00 0.00 ATOM 90 C GLN C 176 58.648 104.658 87.310 1.00 0.00 ATOM 91 N ALA C 177 57.281 104.681 87.373 1.00 0.00 ATOM 92 CA ALA C 177 56.435 105.345 86.444 1.00 0.00 ATOM 93 C ALA C 177 55.015 104.944 86.734 1.00 0.00 ATOM 94 N SER C 178 54.004 105.805 86.298 1.00 0.00 ATOM 95 CA SER C 178 52.571 105.306 86.449 1.00 0.00 ATOM 96 C SER C 178 52.323 104.198 85.400 1.00 0.00 ATOM 97 N GLN C 179 51.274 103.396 85.549 1.00 0.00 ATOM 98 CA GLN C 179 51.116 102.232 84.698 1.00 0.00 ATOM 99 C GLN C 179 50.860 102.431 83.220 1.00 0.00 ATOM 100 N GLU C 180 50.236 103.569 82.783 1.00 0.00 ATOM 101 CA GLU C 180 49.997 103.996 81.449 1.00 0.00 ATOM 102 C GLU C 180 51.225 104.283 80.708 1.00 0.00 ATOM 103 N VAL C 181 52.166 104.899 81.480 1.00 0.00 ATOM 104 CA VAL C 181 53.534 105.110 81.111 1.00 0.00 ATOM 105 C VAL C 181 54.261 103.835 80.936 1.00 0.00 ATOM 106 N LYS C 182 54.174 102.879 81.838 1.00 0.00 ATOM 107 CA LYS C 182 54.732 101.501 81.713 1.00 0.00 ATOM 108 C LYS C 182 54.191 100.815 80.525 1.00 0.00 ATOM 109 N ASN C 183 52.904 100.987 80.239 1.00 0.00 ATOM 110 CA ASN C 183 52.296 100.297 79.003 1.00 0.00 ATOM 111 C ASN C 183 52.898 100.799 77.709 1.00 0.00 ATOM 112 N TRP C 184 53.109 102.123 77.683 1.00 0.00 ATOM 113 CA TRP C 184 53.774 102.883 76.579 1.00 0.00 ATOM 114 C TRP C 184 55.281 102.495 76.367 1.00 0.00 ATOM 115 N MET C 185 55.932 102.335 77.502 1.00 0.00 ATOM 116 CA MET C 185 57.245 101.750 77.563 1.00 0.00 ATOM 117 C MET C 185 57.201 100.338 76.977 1.00 0.00 ATOM 118 N THR C 186 56.224 99.507 77.258 1.00 0.00 ATOM 119 CA THR C 186 56.214 98.108 76.752 1.00 0.00 ATOM 120 C THR C 186 56.229 97.954 75.254 1.00 0.00 ATOM 121 N GLU C 187 55.283 98.777 74.669 1.00 0.00 ATOM 122 CA GLU C 187 55.046 98.846 73.277 1.00 0.00 ATOM 123 C GLU C 187 56.190 99.357 72.496 1.00 0.00 ATOM 124 N THR C 188 56.986 100.277 73.141 1.00 0.00 ATOM 125 CA THR C 188 58.136 100.925 72.537 1.00 0.00 ATOM 126 C THR C 188 59.399 100.138 72.811 1.00 0.00 ATOM 127 N LEU C 189 59.882 99.923 73.996 1.00 0.00 ATOM 128 CA LEU C 189 61.201 99.496 74.311 1.00 0.00 ATOM 129 C LEU C 189 61.260 98.074 74.050 1.00 0.00 ATOM 130 N LEU C 190 60.165 97.309 74.133 1.00 0.00 ATOM 131 CA LEU C 190 60.316 95.864 73.943 1.00 0.00 ATOM 132 C LEU C 190 60.858 95.536 72.557 1.00 0.00 ATOM 133 N VAL C 191 60.195 96.080 71.562 1.00 0.00 ATOM 134 CA VAL C 191 60.597 95.926 70.183 1.00 0.00 ATOM 135 C VAL C 191 61.886 96.686 69.815 1.00 0.00 ATOM 136 N GLN C 192 62.151 97.860 70.452 1.00 0.00 ATOM 137 CA GLN C 192 63.278 98.709 70.133 1.00 0.00 ATOM 138 C GLN C 192 64.618 98.172 70.675 1.00 0.00 ATOM 139 N ASN C 193 64.676 97.472 71.855 1.00 0.00 ATOM 140 CA ASN C 193 65.924 96.947 72.423 1.00 0.00 ATOM 141 C ASN C 193 66.041 95.477 71.993 1.00 0.00 ATOM 142 N ALA C 194 65.192 95.039 71.066 1.00 0.00 ATOM 143 CA ALA C 194 65.273 93.739 70.541 1.00 0.00 ATOM 144 C ALA C 194 66.463 93.471 69.720 1.00 0.00 ATOM 145 N ASN C 195 66.766 92.161 69.607 1.00 0.00 ATOM 146 CA ASN C 195 67.809 91.738 68.691 1.00 0.00 ATOM 147 C ASN C 195 67.458 92.046 67.209 1.00 0.00 ATOM 148 N PRO C 196 68.312 92.504 66.269 1.00 0.00 ATOM 149 CA PRO C 196 67.806 92.978 64.920 1.00 0.00 ATOM 150 C PRO C 196 66.993 91.924 64.133 1.00 0.00 ATOM 151 N ASP C 197 67.419 90.685 64.031 1.00 0.00 ATOM 152 CA ASP C 197 66.582 89.619 63.475 1.00 0.00 ATOM 153 C ASP C 197 65.240 89.382 64.187 1.00 0.00 ATOM 154 N CYS C 198 65.144 89.292 65.527 1.00 0.00 ATOM 155 CA CYS C 198 63.863 89.387 66.281 1.00 0.00 ATOM 156 C CYS C 198 63.124 90.700 66.057 1.00 0.00 ATOM 157 N LYS C 199 63.756 91.893 66.005 1.00 0.00 ATOM 158 CA LYS C 199 63.223 93.229 65.840 1.00 0.00 ATOM 159 C LYS C 199 62.502 93.265 64.482 1.00 0.00 ATOM 160 N THR C 200 63.135 92.715 63.371 1.00 0.00 ATOM 161 CA THR C 200 62.553 92.522 62.090 1.00 0.00 ATOM 162 C THR C 200 61.228 91.753 62.100 1.00 0.00 ATOM 163 N ILE C 201 61.261 90.527 62.722 1.00 0.00 ATOM 164 CA ILE C 201 60.098 89.657 62.952 1.00 0.00 ATOM 165 C ILE C 201 58.937 90.309 63.628 1.00 0.00 ATOM 166 N LEU C 202 59.241 91.106 64.664 1.00 0.00 ATOM 167 CA LEU C 202 58.295 91.857 65.469 1.00 0.00 ATOM 168 C LEU C 202 57.679 92.963 64.690 1.00 0.00 ATOM 169 N LYS C 203 58.475 93.655 63.863 1.00 0.00 ATOM 170 CA LYS C 203 57.918 94.742 63.061 1.00 0.00 ATOM 171 C LYS C 203 57.048 94.178 61.975 1.00 0.00 ATOM 172 N ALA C 204 57.428 93.021 61.398 1.00 0.00 ATOM 173 CA ALA C 204 56.541 92.256 60.528 1.00 0.00 ATOM 174 C ALA C 204 55.250 92.012 61.253 1.00 0.00 ATOM 175 N LEU C 205 55.292 91.514 62.486 1.00 0.00 ATOM 176 CA LEU C 205 54.049 91.256 63.253 1.00 0.00 ATOM 177 C LEU C 205 53.176 92.487 63.507 1.00 0.00 ATOM 178 N GLY C 206 53.798 93.620 63.803 1.00 0.00 ATOM 179 CA GLY C 206 53.109 94.832 64.072 1.00 0.00 ATOM 180 C GLY C 206 52.465 94.900 65.443 1.00 0.00 ATOM 181 N PRO C 207 51.850 96.037 65.840 1.00 0.00 ATOM 182 CA PRO C 207 51.255 96.257 67.149 1.00 0.00 ATOM 183 C PRO C 207 49.971 95.426 67.477 1.00 0.00 ATOM 184 N GLY C 208 49.296 94.748 66.528 1.00 0.00 ATOM 185 CA GLY C 208 48.174 93.808 66.763 1.00 0.00 ATOM 186 C GLY C 208 48.501 92.514 67.452 1.00 0.00 ATOM 187 N ALA C 209 49.764 92.069 67.381 1.00 0.00 ATOM 188 CA ALA C 209 50.179 90.740 67.882 1.00 0.00 ATOM 189 C ALA C 209 50.165 90.720 69.399 1.00 0.00 ATOM 190 N THR C 210 49.625 89.599 69.930 1.00 0.00 ATOM 191 CA THR C 210 49.777 89.380 71.374 1.00 0.00 ATOM 192 C THR C 210 51.125 89.054 71.673 1.00 0.00 ATOM 193 N LEU C 211 51.409 89.029 73.006 1.00 0.00 ATOM 194 CA LEU C 211 52.722 88.604 73.409 1.00 0.00 ATOM 195 C LEU C 211 53.003 87.102 73.160 1.00 0.00 ATOM 196 N GLU C 212 51.929 86.289 73.229 1.00 0.00 ATOM 197 CA GLU C 212 52.151 84.893 72.801 1.00 0.00 ATOM 198 C GLU C 212 52.753 84.742 71.404 1.00 0.00 ATOM 199 N GLU C 213 52.179 85.444 70.484 1.00 0.00 ATOM 200 CA GLU C 213 52.571 85.469 69.077 1.00 0.00 ATOM 201 C GLU C 213 54.013 85.908 68.985 1.00 0.00 ATOM 202 N MET C 214 54.457 86.990 69.701 1.00 0.00 ATOM 203 CA MET C 214 55.799 87.577 69.580 1.00 0.00 ATOM 204 C MET C 214 56.862 86.536 69.966 1.00 0.00 ATOM 205 N MET C 215 56.630 85.679 70.982 1.00 0.00 ATOM 206 CA MET C 215 57.483 84.622 71.407 1.00 0.00 ATOM 207 C MET C 215 57.456 83.499 70.469 1.00 0.00 ATOM 208 N THR C 216 56.324 83.089 69.923 1.00 0.00 ATOM 209 CA THR C 216 56.129 82.105 68.792 1.00 0.00 ATOM 210 C THR C 216 56.770 82.457 67.548 1.00 0.00 ATOM 211 N ALA C 217 56.718 83.766 67.193 1.00 0.00 ATOM 212 CA ALA C 217 57.183 84.217 65.971 1.00 0.00 ATOM 213 C ALA C 217 58.703 84.132 65.685 1.00 0.00 ATOM 214 N CYS C 218 59.460 84.340 66.767 1.00 0.00 ATOM 215 CA CYS C 218 60.819 84.739 66.642 1.00 0.00 ATOM 216 C CYS C 218 61.938 83.628 66.735 1.00 0.00 ATOM 217 N GLN C 219 61.596 82.334 66.770 1.00 0.00 ATOM 218 CA GLN C 219 62.358 81.184 66.862 1.00 0.00 ATOM 219 C GLN C 219 63.216 80.883 65.622 1.00 0.00 TER