HEADER VIRAL PROTEIN 02-MAY-14 4D1K TITLE Cryo-electron microscopy of tubular arrays of HIV-1 Gag resolves TITLE 2 structures essential for immature virus assembly. COMPND MOL_ID: 1; COMPND 2 MOLECULE: GAG PROTEIN; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 MUTATION: YES; COMPND 5 FRAGMENT: CAPSID, RESIDUES ; COMPND 6 ENGINEERED: YES; COMPND 7 10NM PROTEIN-A CONJUGATED GOLD PARTICLES WERE ADDED TO THE SAMPLE. COMPND 8 OTHER_DETAILS: PROTEIN CONSTRUCT CONSISTS OF CA TO NC DOMAINS WITH MUTATION IN COMPND 9 POSITION Y169.; EXPDTA ELECTRON MICROSCOPY DBREF 4D1K D 1 219 UNP Q5D0H3 Q5D0H3_9HIV 1 219 SEQRES 1 D 72 THR SER ILE LEU ASP ILE ARG GLN GLY PRO LYS GLU PRO SEQRES 2 D 72 PHE ARG ASP TYR VAL ASP ARG PHE SER LYS THR LEU ARG SEQRES 3 D 72 ALA GLU GLN ALA SER GLN GLU VAL LYS ASN TRP MET THR SEQRES 4 D 72 GLU THR LEU LEU VAL GLN ASN ALA ASN PRO ASP CYS LYS SEQRES 5 D 72 THR ILE LEU LYS ALA LEU GLY PRO GLY ALA THR LEU GLU SEQRES 6 D 72 GLU MET MET THR ALA CYS GLN ATOM 1 N THR D 148 93.567 92.900 88.803 1.00 0.00 ATOM 2 CA THR D 148 92.697 93.249 87.704 1.00 0.00 ATOM 3 C THR D 148 93.575 93.737 86.549 1.00 0.00 ATOM 4 N SER D 149 93.042 93.764 85.297 1.00 0.00 ATOM 5 CA SER D 149 93.813 94.313 84.148 1.00 0.00 ATOM 6 C SER D 149 92.803 94.709 83.079 1.00 0.00 ATOM 7 N ILE D 150 92.430 95.994 82.886 1.00 0.00 ATOM 8 CA ILE D 150 91.412 96.485 82.018 1.00 0.00 ATOM 9 C ILE D 150 91.771 96.301 80.504 1.00 0.00 ATOM 10 N LEU D 151 93.090 96.294 80.227 1.00 0.00 ATOM 11 CA LEU D 151 93.728 96.106 78.890 1.00 0.00 ATOM 12 C LEU D 151 93.477 94.754 78.307 1.00 0.00 ATOM 13 N ASP D 152 93.136 93.800 79.152 1.00 0.00 ATOM 14 CA ASP D 152 92.970 92.411 78.794 1.00 0.00 ATOM 15 C ASP D 152 91.523 92.054 78.562 1.00 0.00 ATOM 16 N ILE D 153 90.581 93.068 78.562 1.00 0.00 ATOM 17 CA ILE D 153 89.194 92.724 78.198 1.00 0.00 ATOM 18 C ILE D 153 88.949 92.454 76.699 1.00 0.00 ATOM 19 N ARG D 154 89.659 91.381 76.220 1.00 0.00 ATOM 20 CA ARG D 154 89.714 90.905 74.833 1.00 0.00 ATOM 21 C ARG D 154 88.712 89.772 74.740 1.00 0.00 ATOM 22 N GLN D 155 88.113 89.605 73.534 1.00 0.00 ATOM 23 CA GLN D 155 86.975 88.832 73.366 1.00 0.00 ATOM 24 C GLN D 155 87.150 87.451 72.821 1.00 0.00 ATOM 25 N GLY D 156 86.010 86.696 72.929 1.00 0.00 ATOM 26 CA GLY D 156 85.809 85.485 72.141 1.00 0.00 ATOM 27 C GLY D 156 85.645 85.678 70.656 1.00 0.00 ATOM 28 N PRO D 157 85.551 84.637 69.822 1.00 0.00 ATOM 29 CA PRO D 157 85.594 84.640 68.355 1.00 0.00 ATOM 30 C PRO D 157 84.520 85.440 67.697 1.00 0.00 ATOM 31 N LYS D 158 83.289 85.493 68.260 1.00 0.00 ATOM 32 CA LYS D 158 82.232 86.245 67.616 1.00 0.00 ATOM 33 C LYS D 158 81.631 87.142 68.659 1.00 0.00 ATOM 34 N GLU D 159 82.335 87.410 69.797 1.00 0.00 ATOM 35 CA GLU D 159 81.724 87.778 71.061 1.00 0.00 ATOM 36 C GLU D 159 81.118 89.207 71.103 1.00 0.00 ATOM 37 N PRO D 160 79.807 89.341 71.245 1.00 0.00 ATOM 38 CA PRO D 160 79.131 90.580 71.130 1.00 0.00 ATOM 39 C PRO D 160 79.565 91.799 71.984 1.00 0.00 ATOM 40 N PHE D 161 79.213 93.001 71.526 1.00 0.00 ATOM 41 CA PHE D 161 79.487 94.256 72.236 1.00 0.00 ATOM 42 C PHE D 161 78.864 94.299 73.586 1.00 0.00 ATOM 43 N ARG D 162 77.578 93.878 73.763 1.00 0.00 ATOM 44 CA ARG D 162 76.946 93.884 75.024 1.00 0.00 ATOM 45 C ARG D 162 77.532 93.015 76.064 1.00 0.00 ATOM 46 N ASP D 163 78.137 91.869 75.659 1.00 0.00 ATOM 47 CA ASP D 163 79.001 91.144 76.609 1.00 0.00 ATOM 48 C ASP D 163 80.310 91.958 76.918 1.00 0.00 ATOM 49 N TYR D 164 80.988 92.510 75.829 1.00 0.00 ATOM 50 CA TYR D 164 82.231 93.294 75.982 1.00 0.00 ATOM 51 C TYR D 164 82.202 94.531 76.864 1.00 0.00 ATOM 52 N VAL D 165 81.163 95.365 76.624 1.00 0.00 ATOM 53 CA VAL D 165 80.975 96.622 77.397 1.00 0.00 ATOM 54 C VAL D 165 80.729 96.356 78.866 1.00 0.00 ATOM 55 N ASP D 166 80.055 95.238 79.099 1.00 0.00 ATOM 56 CA ASP D 166 79.688 94.771 80.387 1.00 0.00 ATOM 57 C ASP D 166 80.899 94.326 81.181 1.00 0.00 ATOM 58 N ARG D 167 81.736 93.566 80.543 1.00 0.00 ATOM 59 CA ARG D 167 83.028 93.265 81.093 1.00 0.00 ATOM 60 C ARG D 167 84.012 94.500 81.267 1.00 0.00 ATOM 61 N PHE D 168 84.117 95.331 80.249 1.00 0.00 ATOM 62 CA PHE D 168 84.925 96.461 80.220 1.00 0.00 ATOM 63 C PHE D 168 84.481 97.496 81.297 1.00 0.00 ATOM 64 N SER D 169 83.173 97.795 81.464 1.00 0.00 ATOM 65 CA SER D 169 82.674 98.722 82.474 1.00 0.00 ATOM 66 C SER D 169 82.880 98.224 83.912 1.00 0.00 ATOM 67 N LYS D 170 82.647 96.923 84.127 1.00 0.00 ATOM 68 CA LYS D 170 82.816 96.306 85.457 1.00 0.00 ATOM 69 C LYS D 170 84.330 96.376 85.871 1.00 0.00 ATOM 70 N THR D 171 85.210 95.943 84.884 1.00 0.00 ATOM 71 CA THR D 171 86.662 96.035 84.984 1.00 0.00 ATOM 72 C THR D 171 87.186 97.500 85.046 1.00 0.00 ATOM 73 N LEU D 172 86.643 98.432 84.293 1.00 0.00 ATOM 74 CA LEU D 172 87.057 99.837 84.382 1.00 0.00 ATOM 75 C LEU D 172 86.744 100.427 85.795 1.00 0.00 ATOM 76 N ARG D 173 85.625 100.150 86.448 1.00 0.00 ATOM 77 CA ARG D 173 85.289 100.518 87.907 1.00 0.00 ATOM 78 C ARG D 173 86.141 99.794 88.855 1.00 0.00 ATOM 79 N ALA D 174 86.450 98.519 88.595 1.00 0.00 ATOM 80 CA ALA D 174 87.317 97.722 89.501 1.00 0.00 ATOM 81 C ALA D 174 88.799 97.939 89.359 1.00 0.00 ATOM 82 N GLU D 175 89.240 98.535 88.263 1.00 0.00 ATOM 83 CA GLU D 175 90.605 98.926 87.963 1.00 0.00 ATOM 84 C GLU D 175 91.032 100.221 88.688 1.00 0.00 ATOM 85 N GLN D 176 91.999 100.137 89.660 1.00 0.00 ATOM 86 CA GLN D 176 92.291 101.312 90.558 1.00 0.00 ATOM 87 C GLN D 176 93.169 102.381 89.856 1.00 0.00 ATOM 88 N ALA D 177 92.571 103.351 89.204 1.00 0.00 ATOM 89 CA ALA D 177 93.232 104.403 88.427 1.00 0.00 ATOM 90 C ALA D 177 92.407 105.654 88.464 1.00 0.00 ATOM 91 N SER D 178 92.983 106.805 88.093 1.00 0.00 ATOM 92 CA SER D 178 92.293 108.059 88.310 1.00 0.00 ATOM 93 C SER D 178 91.301 108.154 87.182 1.00 0.00 ATOM 94 N GLN D 179 90.251 108.906 87.366 1.00 0.00 ATOM 95 CA GLN D 179 89.183 109.020 86.452 1.00 0.00 ATOM 96 C GLN D 179 89.625 109.586 85.108 1.00 0.00 ATOM 97 N GLU D 180 90.729 110.458 85.110 1.00 0.00 ATOM 98 CA GLU D 180 91.330 111.019 83.873 1.00 0.00 ATOM 99 C GLU D 180 92.005 109.863 83.091 1.00 0.00 ATOM 100 N VAL D 181 92.737 108.951 83.793 1.00 0.00 ATOM 101 CA VAL D 181 93.226 107.733 83.191 1.00 0.00 ATOM 102 C VAL D 181 92.062 106.879 82.658 1.00 0.00 ATOM 103 N LYS D 182 90.952 106.726 83.436 1.00 0.00 ATOM 104 CA LYS D 182 89.757 106.095 83.010 1.00 0.00 ATOM 105 C LYS D 182 89.156 106.706 81.802 1.00 0.00 ATOM 106 N ASN D 183 89.176 108.113 81.621 1.00 0.00 ATOM 107 CA ASN D 183 88.724 108.696 80.370 1.00 0.00 ATOM 108 C ASN D 183 89.721 108.311 79.227 1.00 0.00 ATOM 109 N TRP D 184 91.027 108.371 79.427 1.00 0.00 ATOM 110 CA TRP D 184 92.019 107.947 78.435 1.00 0.00 ATOM 111 C TRP D 184 91.875 106.449 78.045 1.00 0.00 ATOM 112 N MET D 185 91.714 105.458 78.926 1.00 0.00 ATOM 113 CA MET D 185 91.358 104.048 78.709 1.00 0.00 ATOM 114 C MET D 185 90.020 103.838 78.043 1.00 0.00 ATOM 115 N THR D 186 88.924 104.614 78.406 1.00 0.00 ATOM 116 CA THR D 186 87.615 104.559 77.692 1.00 0.00 ATOM 117 C THR D 186 87.797 104.876 76.148 1.00 0.00 ATOM 118 N GLU D 187 88.569 105.969 75.915 1.00 0.00 ATOM 119 CA GLU D 187 88.902 106.555 74.690 1.00 0.00 ATOM 120 C GLU D 187 89.889 105.717 73.985 1.00 0.00 ATOM 121 N THR D 188 90.709 104.877 74.659 1.00 0.00 ATOM 122 CA THR D 188 91.721 104.083 73.893 1.00 0.00 ATOM 123 C THR D 188 91.094 102.751 73.489 1.00 0.00 ATOM 124 N LEU D 189 90.650 102.061 74.569 1.00 0.00 ATOM 125 CA LEU D 189 90.389 100.664 74.526 1.00 0.00 ATOM 126 C LEU D 189 89.126 100.289 73.842 1.00 0.00 ATOM 127 N LEU D 190 88.051 101.071 73.878 1.00 0.00 ATOM 128 CA LEU D 190 86.774 100.613 73.364 1.00 0.00 ATOM 129 C LEU D 190 86.646 100.129 71.924 1.00 0.00 ATOM 130 N VAL D 191 87.018 100.892 70.950 1.00 0.00 ATOM 131 CA VAL D 191 86.929 100.386 69.540 1.00 0.00 ATOM 132 C VAL D 191 87.989 99.347 69.334 1.00 0.00 ATOM 133 N GLN D 192 89.163 99.492 69.938 1.00 0.00 ATOM 134 CA GLN D 192 90.398 98.694 69.711 1.00 0.00 ATOM 135 C GLN D 192 90.437 97.283 70.246 1.00 0.00 ATOM 136 N ASN D 193 89.864 96.920 71.396 1.00 0.00 ATOM 137 CA ASN D 193 90.126 95.701 72.145 1.00 0.00 ATOM 138 C ASN D 193 88.850 94.770 71.952 1.00 0.00 ATOM 139 N ALA D 194 87.860 95.265 71.234 1.00 0.00 ATOM 140 CA ALA D 194 86.582 94.673 70.757 1.00 0.00 ATOM 141 C ALA D 194 86.902 93.485 69.874 1.00 0.00 ATOM 142 N ASN D 195 85.957 92.486 69.938 1.00 0.00 ATOM 143 CA ASN D 195 85.938 91.264 69.014 1.00 0.00 ATOM 144 C ASN D 195 86.053 91.712 67.548 1.00 0.00 ATOM 145 N PRO D 196 86.899 91.265 66.620 1.00 0.00 ATOM 146 CA PRO D 196 87.106 91.869 65.293 1.00 0.00 ATOM 147 C PRO D 196 85.822 92.051 64.491 1.00 0.00 ATOM 148 N ASP D 197 84.826 91.019 64.515 1.00 0.00 ATOM 149 CA ASP D 197 83.525 91.304 63.878 1.00 0.00 ATOM 150 C ASP D 197 82.891 92.546 64.400 1.00 0.00 ATOM 151 N CYS D 198 82.893 92.749 65.772 1.00 0.00 ATOM 152 CA CYS D 198 82.299 93.904 66.457 1.00 0.00 ATOM 153 C CYS D 198 82.967 95.240 66.040 1.00 0.00 ATOM 154 N LYS D 199 84.300 95.202 66.005 1.00 0.00 ATOM 155 CA LYS D 199 85.225 96.249 65.698 1.00 0.00 ATOM 156 C LYS D 199 84.926 96.770 64.301 1.00 0.00 ATOM 157 N THR D 200 84.657 95.898 63.309 1.00 0.00 ATOM 158 CA THR D 200 84.061 96.329 62.032 1.00 0.00 ATOM 159 C THR D 200 82.801 97.169 62.159 1.00 0.00 ATOM 160 N ILE D 201 81.823 96.654 62.942 1.00 0.00 ATOM 161 CA ILE D 201 80.569 97.392 63.212 1.00 0.00 ATOM 162 C ILE D 201 80.808 98.764 63.866 1.00 0.00 ATOM 163 N LEU D 202 81.621 98.806 64.832 1.00 0.00 ATOM 164 CA LEU D 202 81.979 99.926 65.680 1.00 0.00 ATOM 165 C LEU D 202 82.789 100.951 64.906 1.00 0.00 ATOM 166 N LYS D 203 83.664 100.528 63.917 1.00 0.00 ATOM 167 CA LYS D 203 84.311 101.431 63.034 1.00 0.00 ATOM 168 C LYS D 203 83.371 102.065 61.998 1.00 0.00 ATOM 169 N ALA D 204 82.425 101.321 61.447 1.00 0.00 ATOM 170 CA ALA D 204 81.254 101.974 60.772 1.00 0.00 ATOM 171 C ALA D 204 80.326 102.975 61.553 1.00 0.00 ATOM 172 N LEU D 205 79.873 102.591 62.780 1.00 0.00 ATOM 173 CA LEU D 205 78.988 103.327 63.655 1.00 0.00 ATOM 174 C LEU D 205 79.534 104.662 64.143 1.00 0.00 ATOM 175 N GLY D 206 80.757 104.617 64.534 1.00 0.00 ATOM 176 CA GLY D 206 81.528 105.752 65.040 1.00 0.00 ATOM 177 C GLY D 206 81.177 106.409 66.357 1.00 0.00 ATOM 178 N PRO D 207 81.942 107.383 66.749 1.00 0.00 ATOM 179 CA PRO D 207 81.690 108.097 68.019 1.00 0.00 ATOM 180 C PRO D 207 80.354 108.800 68.059 1.00 0.00 ATOM 181 N GLY D 208 79.586 108.808 66.940 1.00 0.00 ATOM 182 CA GLY D 208 78.264 109.402 66.986 1.00 0.00 ATOM 183 C GLY D 208 77.245 108.451 67.592 1.00 0.00 ATOM 184 N ALA D 209 77.515 107.136 67.761 1.00 0.00 ATOM 185 CA ALA D 209 76.691 106.172 68.333 1.00 0.00 ATOM 186 C ALA D 209 77.110 105.820 69.805 1.00 0.00 ATOM 187 N THR D 210 76.130 105.719 70.690 1.00 0.00 ATOM 188 CA THR D 210 76.310 105.497 72.109 1.00 0.00 ATOM 189 C THR D 210 76.511 104.021 72.307 1.00 0.00 ATOM 190 N LEU D 211 76.801 103.643 73.612 1.00 0.00 ATOM 191 CA LEU D 211 77.157 102.204 73.970 1.00 0.00 ATOM 192 C LEU D 211 75.929 101.378 73.818 1.00 0.00 ATOM 193 N GLU D 212 74.756 101.893 74.114 1.00 0.00 ATOM 194 CA GLU D 212 73.585 101.194 73.709 1.00 0.00 ATOM 195 C GLU D 212 73.340 100.827 72.243 1.00 0.00 ATOM 196 N GLU D 213 73.489 101.841 71.332 1.00 0.00 ATOM 197 CA GLU D 213 73.535 101.611 69.872 1.00 0.00 ATOM 198 C GLU D 213 74.596 100.603 69.412 1.00 0.00 ATOM 199 N MET D 214 75.816 100.655 69.952 1.00 0.00 ATOM 200 CA MET D 214 76.804 99.610 69.794 1.00 0.00 ATOM 201 C MET D 214 76.406 98.162 70.264 1.00 0.00 ATOM 202 N MET D 215 75.750 98.094 71.393 1.00 0.00 ATOM 203 CA MET D 215 75.342 96.833 71.975 1.00 0.00 ATOM 204 C MET D 215 74.182 96.227 71.128 1.00 0.00 ATOM 205 N THR D 216 73.191 97.048 70.697 1.00 0.00 ATOM 206 CA THR D 216 72.170 96.547 69.819 1.00 0.00 ATOM 207 C THR D 216 72.720 96.217 68.468 1.00 0.00 ATOM 208 N ALA D 217 73.635 97.020 67.935 1.00 0.00 ATOM 209 CA ALA D 217 74.158 96.892 66.617 1.00 0.00 ATOM 210 C ALA D 217 74.948 95.650 66.374 1.00 0.00 ATOM 211 N CYS D 218 75.626 95.197 67.395 1.00 0.00 ATOM 212 CA CYS D 218 76.648 94.186 67.262 1.00 0.00 ATOM 213 C CYS D 218 76.135 92.747 67.447 1.00 0.00 ATOM 214 N GLN D 219 74.847 92.517 67.493 1.00 0.00 ATOM 215 CA GLN D 219 74.299 91.152 67.592 1.00 0.00 ATOM 216 C GLN D 219 74.222 90.392 66.200 1.00 0.00 TER