HEADER VIRAL PROTEIN 02-MAY-14 4D1K TITLE Cryo-electron microscopy of tubular arrays of HIV-1 Gag resolves TITLE 2 structures essential for immature virus assembly. COMPND MOL_ID: 1; COMPND 2 MOLECULE: GAG PROTEIN; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 MUTATION: YES; COMPND 5 FRAGMENT: CAPSID, RESIDUES ; COMPND 6 ENGINEERED: YES; COMPND 7 10NM PROTEIN-A CONJUGATED GOLD PARTICLES WERE ADDED TO THE SAMPLE. COMPND 8 OTHER_DETAILS: PROTEIN CONSTRUCT CONSISTS OF CA TO NC DOMAINS WITH MUTATION IN COMPND 9 POSITION Y169.; EXPDTA ELECTRON MICROSCOPY DBREF 4D1K F 1 219 UNP Q5D0H3 Q5D0H3_9HIV 1 219 SEQRES 1 F 73 PRO THR SER ILE LEU ASP ILE ARG GLN GLY PRO LYS GLU SEQRES 2 F 73 PRO PHE ARG ASP TYR VAL ASP ARG PHE SER LYS THR LEU SEQRES 3 F 73 ARG ALA GLU GLN ALA SER GLN GLU VAL LYS ASN TRP MET SEQRES 4 F 73 THR GLU THR LEU LEU VAL GLN ASN ALA ASN PRO ASP CYS SEQRES 5 F 73 LYS THR ILE LEU LYS ALA LEU GLY PRO GLY ALA THR LEU SEQRES 6 F 73 GLU GLU MET MET THR ALA CYS GLN ATOM 1 N PRO F 147 87.786 49.440 94.478 1.00 0.00 ATOM 2 CA PRO F 147 88.401 50.158 93.352 1.00 0.00 ATOM 3 C PRO F 147 87.300 50.646 92.401 1.00 0.00 ATOM 4 N THR F 148 87.744 51.123 91.184 1.00 0.00 ATOM 5 CA THR F 148 86.767 51.535 90.155 1.00 0.00 ATOM 6 C THR F 148 87.460 51.071 88.953 1.00 0.00 ATOM 7 N SER F 149 86.707 50.947 87.857 1.00 0.00 ATOM 8 CA SER F 149 87.023 50.075 86.690 1.00 0.00 ATOM 9 C SER F 149 87.513 50.804 85.448 1.00 0.00 ATOM 10 N ILE F 150 88.649 50.317 84.859 1.00 0.00 ATOM 11 CA ILE F 150 89.200 50.750 83.560 1.00 0.00 ATOM 12 C ILE F 150 88.219 50.599 82.385 1.00 0.00 ATOM 13 N LEU F 151 87.602 49.413 82.367 1.00 0.00 ATOM 14 CA LEU F 151 86.631 48.974 81.311 1.00 0.00 ATOM 15 C LEU F 151 85.767 50.042 80.720 1.00 0.00 ATOM 16 N ASP F 152 85.112 50.829 81.662 1.00 0.00 ATOM 17 CA ASP F 152 84.153 51.867 81.370 1.00 0.00 ATOM 18 C ASP F 152 84.583 53.066 80.601 1.00 0.00 ATOM 19 N ILE F 153 85.765 53.605 80.888 1.00 0.00 ATOM 20 CA ILE F 153 86.331 54.737 80.317 1.00 0.00 ATOM 21 C ILE F 153 86.447 54.644 78.803 1.00 0.00 ATOM 22 N ARG F 154 85.600 55.303 78.033 1.00 0.00 ATOM 23 CA ARG F 154 85.621 55.291 76.597 1.00 0.00 ATOM 24 C ARG F 154 85.221 56.676 76.129 1.00 0.00 ATOM 25 N GLN F 155 85.419 56.948 74.830 1.00 0.00 ATOM 26 CA GLN F 155 85.268 58.304 74.359 1.00 0.00 ATOM 27 C GLN F 155 84.004 58.595 73.501 1.00 0.00 ATOM 28 N GLY F 156 83.101 59.484 73.916 1.00 0.00 ATOM 29 CA GLY F 156 81.990 59.914 73.167 1.00 0.00 ATOM 30 C GLY F 156 82.138 60.720 71.890 1.00 0.00 ATOM 31 N PRO F 157 81.069 61.116 71.111 1.00 0.00 ATOM 32 CA PRO F 157 81.286 61.722 69.763 1.00 0.00 ATOM 33 C PRO F 157 81.748 63.164 69.856 1.00 0.00 ATOM 34 N LYS F 158 81.253 63.928 70.843 1.00 0.00 ATOM 35 CA LYS F 158 81.560 65.306 71.109 1.00 0.00 ATOM 36 C LYS F 158 82.549 65.474 72.287 1.00 0.00 ATOM 37 N GLU F 159 82.984 64.310 72.790 1.00 0.00 ATOM 38 CA GLU F 159 83.922 64.191 73.919 1.00 0.00 ATOM 39 C GLU F 159 85.368 64.346 73.394 1.00 0.00 ATOM 40 N PRO F 160 86.253 65.040 74.077 1.00 0.00 ATOM 41 CA PRO F 160 87.617 65.186 73.532 1.00 0.00 ATOM 42 C PRO F 160 88.488 64.078 74.033 1.00 0.00 ATOM 43 N PHE F 161 89.333 63.606 73.149 1.00 0.00 ATOM 44 CA PHE F 161 90.279 62.590 73.347 1.00 0.00 ATOM 45 C PHE F 161 91.216 62.916 74.578 1.00 0.00 ATOM 46 N ARG F 162 91.653 64.183 74.704 1.00 0.00 ATOM 47 CA ARG F 162 92.438 64.650 75.848 1.00 0.00 ATOM 48 C ARG F 162 91.688 64.487 77.196 1.00 0.00 ATOM 49 N ASP F 163 90.364 64.717 77.187 1.00 0.00 ATOM 50 CA ASP F 163 89.539 64.635 78.350 1.00 0.00 ATOM 51 C ASP F 163 89.287 63.174 78.697 1.00 0.00 ATOM 52 N TYR F 164 89.122 62.341 77.639 1.00 0.00 ATOM 53 CA TYR F 164 88.943 60.903 77.790 1.00 0.00 ATOM 54 C TYR F 164 90.237 60.325 78.414 1.00 0.00 ATOM 55 N VAL F 165 91.455 60.758 78.013 1.00 0.00 ATOM 56 CA VAL F 165 92.697 60.355 78.570 1.00 0.00 ATOM 57 C VAL F 165 92.912 60.813 79.983 1.00 0.00 ATOM 58 N ASP F 166 92.320 61.915 80.417 1.00 0.00 ATOM 59 CA ASP F 166 92.337 62.281 81.805 1.00 0.00 ATOM 60 C ASP F 166 91.556 61.432 82.677 1.00 0.00 ATOM 61 N ARG F 167 90.333 60.982 82.259 1.00 0.00 ATOM 62 CA ARG F 167 89.660 59.875 82.934 1.00 0.00 ATOM 63 C ARG F 167 90.300 58.483 82.880 1.00 0.00 ATOM 64 N PHE F 168 90.868 58.084 81.743 1.00 0.00 ATOM 65 CA PHE F 168 91.600 56.820 81.578 1.00 0.00 ATOM 66 C PHE F 168 92.768 56.704 82.501 1.00 0.00 ATOM 67 N SER F 169 93.632 57.773 82.549 1.00 0.00 ATOM 68 CA SER F 169 94.891 57.781 83.339 1.00 0.00 ATOM 69 C SER F 169 94.522 57.662 84.785 1.00 0.00 ATOM 70 N LYS F 170 93.531 58.493 85.244 1.00 0.00 ATOM 71 CA LYS F 170 93.075 58.468 86.607 1.00 0.00 ATOM 72 C LYS F 170 92.420 57.101 87.003 1.00 0.00 ATOM 73 N THR F 171 91.598 56.519 86.142 1.00 0.00 ATOM 74 CA THR F 171 90.915 55.247 86.370 1.00 0.00 ATOM 75 C THR F 171 91.966 54.225 86.444 1.00 0.00 ATOM 76 N LEU F 172 93.062 54.333 85.644 1.00 0.00 ATOM 77 CA LEU F 172 94.111 53.395 85.668 1.00 0.00 ATOM 78 C LEU F 172 94.933 53.350 87.000 1.00 0.00 ATOM 79 N ARG F 173 95.047 54.514 87.711 1.00 0.00 ATOM 80 CA ARG F 173 95.626 54.557 89.038 1.00 0.00 ATOM 81 C ARG F 173 94.717 53.838 90.034 1.00 0.00 ATOM 82 N ALA F 174 93.395 53.936 89.786 1.00 0.00 ATOM 83 CA ALA F 174 92.377 53.522 90.712 1.00 0.00 ATOM 84 C ALA F 174 92.016 52.050 90.606 1.00 0.00 ATOM 85 N GLU F 175 92.321 51.546 89.443 1.00 0.00 ATOM 86 CA GLU F 175 92.146 50.120 89.010 1.00 0.00 ATOM 87 C GLU F 175 93.058 49.217 89.855 1.00 0.00 ATOM 88 N GLN F 176 92.486 48.221 90.555 1.00 0.00 ATOM 89 CA GLN F 176 93.178 47.265 91.323 1.00 0.00 ATOM 90 C GLN F 176 93.845 46.107 90.492 1.00 0.00 ATOM 91 N ALA F 177 95.251 45.974 90.615 1.00 0.00 ATOM 92 CA ALA F 177 96.145 45.208 89.791 1.00 0.00 ATOM 93 C ALA F 177 97.544 45.742 89.866 1.00 0.00 ATOM 94 N SER F 178 98.655 45.122 89.330 1.00 0.00 ATOM 95 CA SER F 178 100.021 45.616 89.237 1.00 0.00 ATOM 96 C SER F 178 100.360 46.313 87.990 1.00 0.00 ATOM 97 N GLN F 179 101.613 46.792 87.922 1.00 0.00 ATOM 98 CA GLN F 179 102.089 47.641 86.831 1.00 0.00 ATOM 99 C GLN F 179 102.192 47.058 85.439 1.00 0.00 ATOM 100 N GLU F 180 102.508 45.745 85.455 1.00 0.00 ATOM 101 CA GLU F 180 102.533 44.971 84.217 1.00 0.00 ATOM 102 C GLU F 180 101.114 44.900 83.602 1.00 0.00 ATOM 103 N VAL F 181 100.067 44.803 84.437 1.00 0.00 ATOM 104 CA VAL F 181 98.730 45.042 84.021 1.00 0.00 ATOM 105 C VAL F 181 98.477 46.434 83.549 1.00 0.00 ATOM 106 N LYS F 182 98.825 47.494 84.250 1.00 0.00 ATOM 107 CA LYS F 182 98.665 48.862 83.880 1.00 0.00 ATOM 108 C LYS F 182 99.301 49.263 82.610 1.00 0.00 ATOM 109 N ASN F 183 100.517 48.848 82.349 1.00 0.00 ATOM 110 CA ASN F 183 101.098 49.185 81.089 1.00 0.00 ATOM 111 C ASN F 183 100.428 48.517 79.911 1.00 0.00 ATOM 112 N TRP F 184 100.078 47.243 80.063 1.00 0.00 ATOM 113 CA TRP F 184 99.363 46.453 79.170 1.00 0.00 ATOM 114 C TRP F 184 97.916 46.982 78.892 1.00 0.00 ATOM 115 N MET F 185 97.169 47.377 79.927 1.00 0.00 ATOM 116 CA MET F 185 95.946 48.062 79.775 1.00 0.00 ATOM 117 C MET F 185 95.963 49.390 79.059 1.00 0.00 ATOM 118 N THR F 186 96.959 50.164 79.305 1.00 0.00 ATOM 119 CA THR F 186 97.259 51.381 78.606 1.00 0.00 ATOM 120 C THR F 186 97.457 51.195 77.139 1.00 0.00 ATOM 121 N GLU F 187 98.285 50.271 76.801 1.00 0.00 ATOM 122 CA GLU F 187 98.659 50.073 75.449 1.00 0.00 ATOM 123 C GLU F 187 97.478 49.541 74.611 1.00 0.00 ATOM 124 N THR F 188 96.649 48.710 75.312 1.00 0.00 ATOM 125 CA THR F 188 95.561 48.056 74.627 1.00 0.00 ATOM 126 C THR F 188 94.308 48.930 74.643 1.00 0.00 ATOM 127 N LEU F 189 93.783 49.253 75.788 1.00 0.00 ATOM 128 CA LEU F 189 92.494 49.776 76.091 1.00 0.00 ATOM 129 C LEU F 189 92.376 51.221 75.877 1.00 0.00 ATOM 130 N LEU F 190 93.480 52.021 75.927 1.00 0.00 ATOM 131 CA LEU F 190 93.440 53.469 75.729 1.00 0.00 ATOM 132 C LEU F 190 92.969 53.744 74.303 1.00 0.00 ATOM 133 N VAL F 191 93.610 53.053 73.314 1.00 0.00 ATOM 134 CA VAL F 191 93.337 53.117 71.912 1.00 0.00 ATOM 135 C VAL F 191 92.085 52.404 71.638 1.00 0.00 ATOM 136 N GLN F 192 91.758 51.284 72.322 1.00 0.00 ATOM 137 CA GLN F 192 90.667 50.450 71.983 1.00 0.00 ATOM 138 C GLN F 192 89.254 51.094 72.317 1.00 0.00 ATOM 139 N ASN F 193 89.182 51.873 73.393 1.00 0.00 ATOM 140 CA ASN F 193 87.930 52.572 73.819 1.00 0.00 ATOM 141 C ASN F 193 87.810 54.029 73.328 1.00 0.00 ATOM 142 N ALA F 194 88.738 54.453 72.485 1.00 0.00 ATOM 143 CA ALA F 194 88.678 55.704 71.776 1.00 0.00 ATOM 144 C ALA F 194 87.519 55.752 70.794 1.00 0.00 ATOM 145 N ASN F 195 86.980 56.932 70.441 1.00 0.00 ATOM 146 CA ASN F 195 85.920 57.011 69.422 1.00 0.00 ATOM 147 C ASN F 195 86.475 56.707 68.080 1.00 0.00 ATOM 148 N PRO F 196 85.858 56.154 67.125 1.00 0.00 ATOM 149 CA PRO F 196 86.520 55.665 65.951 1.00 0.00 ATOM 150 C PRO F 196 87.321 56.701 65.153 1.00 0.00 ATOM 151 N ASP F 197 86.887 57.914 64.857 1.00 0.00 ATOM 152 CA ASP F 197 87.706 58.898 64.210 1.00 0.00 ATOM 153 C ASP F 197 88.998 59.238 64.945 1.00 0.00 ATOM 154 N CYS F 198 88.892 59.453 66.261 1.00 0.00 ATOM 155 CA CYS F 198 90.034 59.519 67.104 1.00 0.00 ATOM 156 C CYS F 198 90.866 58.267 67.077 1.00 0.00 ATOM 157 N LYS F 199 90.196 57.154 67.144 1.00 0.00 ATOM 158 CA LYS F 199 90.877 55.873 67.129 1.00 0.00 ATOM 159 C LYS F 199 91.790 55.657 65.947 1.00 0.00 ATOM 160 N THR F 200 91.211 56.039 64.813 1.00 0.00 ATOM 161 CA THR F 200 91.792 56.066 63.484 1.00 0.00 ATOM 162 C THR F 200 93.091 56.914 63.490 1.00 0.00 ATOM 163 N ILE F 201 93.018 58.137 64.051 1.00 0.00 ATOM 164 CA ILE F 201 94.219 58.975 64.279 1.00 0.00 ATOM 165 C ILE F 201 95.281 58.266 65.102 1.00 0.00 ATOM 166 N LEU F 202 94.874 57.571 66.205 1.00 0.00 ATOM 167 CA LEU F 202 95.834 56.946 67.018 1.00 0.00 ATOM 168 C LEU F 202 96.450 55.759 66.278 1.00 0.00 ATOM 169 N LYS F 203 95.744 55.003 65.508 1.00 0.00 ATOM 170 CA LYS F 203 96.241 53.885 64.715 1.00 0.00 ATOM 171 C LYS F 203 97.111 54.284 63.473 1.00 0.00 ATOM 172 N ALA F 204 96.744 55.406 62.795 1.00 0.00 ATOM 173 CA ALA F 204 97.540 56.011 61.808 1.00 0.00 ATOM 174 C ALA F 204 98.906 56.350 62.301 1.00 0.00 ATOM 175 N LEU F 205 98.932 56.995 63.472 1.00 0.00 ATOM 176 CA LEU F 205 100.176 57.361 64.202 1.00 0.00 ATOM 177 C LEU F 205 100.959 56.120 64.746 1.00 0.00 ATOM 178 N GLY F 206 100.277 55.120 65.273 1.00 0.00 ATOM 179 CA GLY F 206 100.736 53.815 65.720 1.00 0.00 ATOM 180 C GLY F 206 101.368 53.861 67.052 1.00 0.00 ATOM 181 N PRO F 207 101.738 52.723 67.580 1.00 0.00 ATOM 182 CA PRO F 207 102.048 52.442 68.979 1.00 0.00 ATOM 183 C PRO F 207 103.207 53.176 69.558 1.00 0.00 ATOM 184 N GLY F 208 104.252 53.635 68.736 1.00 0.00 ATOM 185 CA GLY F 208 105.395 54.412 69.247 1.00 0.00 ATOM 186 C GLY F 208 105.149 55.937 69.585 1.00 0.00 ATOM 187 N ALA F 209 104.014 56.501 69.159 1.00 0.00 ATOM 188 CA ALA F 209 103.642 57.873 69.428 1.00 0.00 ATOM 189 C ALA F 209 103.558 58.152 70.902 1.00 0.00 ATOM 190 N THR F 210 104.013 59.334 71.367 1.00 0.00 ATOM 191 CA THR F 210 103.858 59.694 72.767 1.00 0.00 ATOM 192 C THR F 210 102.485 60.118 73.205 1.00 0.00 ATOM 193 N LEU F 211 102.045 59.970 74.471 1.00 0.00 ATOM 194 CA LEU F 211 100.604 60.307 74.770 1.00 0.00 ATOM 195 C LEU F 211 100.351 61.824 74.664 1.00 0.00 ATOM 196 N GLU F 212 101.431 62.539 74.930 1.00 0.00 ATOM 197 CA GLU F 212 101.516 63.992 74.657 1.00 0.00 ATOM 198 C GLU F 212 101.177 64.258 73.208 1.00 0.00 ATOM 199 N GLU F 213 101.797 63.518 72.262 1.00 0.00 ATOM 200 CA GLU F 213 101.288 63.533 70.856 1.00 0.00 ATOM 201 C GLU F 213 99.843 63.051 70.572 1.00 0.00 ATOM 202 N MET F 214 99.404 61.911 71.166 1.00 0.00 ATOM 203 CA MET F 214 98.069 61.428 70.890 1.00 0.00 ATOM 204 C MET F 214 96.969 62.399 71.293 1.00 0.00 ATOM 205 N MET F 215 97.094 63.049 72.459 1.00 0.00 ATOM 206 CA MET F 215 96.222 63.971 73.039 1.00 0.00 ATOM 207 C MET F 215 96.256 65.333 72.352 1.00 0.00 ATOM 208 N THR F 216 97.397 65.908 71.841 1.00 0.00 ATOM 209 CA THR F 216 97.362 66.993 70.902 1.00 0.00 ATOM 210 C THR F 216 96.742 66.643 69.556 1.00 0.00 ATOM 211 N ALA F 217 96.971 65.483 68.918 1.00 0.00 ATOM 212 CA ALA F 217 96.490 65.111 67.617 1.00 0.00 ATOM 213 C ALA F 217 95.004 64.977 67.496 1.00 0.00 ATOM 214 N CYS F 218 94.254 64.544 68.473 1.00 0.00 ATOM 215 CA CYS F 218 92.871 64.091 68.189 1.00 0.00 ATOM 216 C CYS F 218 91.783 65.152 68.361 1.00 0.00 ATOM 217 N GLN F 219 92.174 66.403 68.619 1.00 0.00 ATOM 218 CA GLN F 219 91.198 67.491 68.716 1.00 0.00 ATOM 219 C GLN F 219 91.197 68.331 67.382 1.00 0.00 TER