HEADER ISOMERASE/ISOMERASE INHIBITOR 25-JUL-12 4GAE TITLE Crystal structure of plasmodium dxr in complex with a TITLE 2 pyridine-containing inhibitor COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, COMPND 3 CHAIN: A, B; COMPND 4 MUTATION: YES; COMPND 5 EC: 1.1.1.267; COMPND 6 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.30 ANGSTORMS DBREF 4GAE A 75 488 UNP O96693 DXR_PLAFX 75 488 SEQRES 1 A 30 SER GLU ASN SER GLU ASP LEU MET LYS GLN ILE LEU GLN SEQRES 2 A 30 ILE HIS SER TRP ALA LYS ASP LYS ALA THR ASP ILE TYR SEQRES 3 A 30 ASN LYS HIS ASN ATOM 1 N SER A 457 -11.816 -5.686 -5.459 1.00 51.19 ATOM 2 CA SER A 457 -13.261 -5.847 -5.283 1.00 52.97 ATOM 3 C SER A 457 -13.771 -5.055 -4.088 1.00 53.99 ATOM 4 O SER A 457 -13.128 -5.013 -3.043 1.00 53.52 ATOM 5 CB SER A 457 -13.607 -7.323 -5.084 1.00 53.80 ATOM 6 OG SER A 457 -13.167 -8.109 -6.178 1.00 56.55 ATOM 7 N GLU A 458 -14.939 -4.443 -4.246 1.00 55.72 ATOM 8 CA GLU A 458 -15.541 -3.644 -3.184 1.00 57.41 ATOM 9 C GLU A 458 -16.026 -4.440 -1.974 1.00 56.38 ATOM 10 O GLU A 458 -15.549 -4.216 -0.863 1.00 56.62 ATOM 11 CB GLU A 458 -16.699 -2.812 -3.747 1.00 59.76 ATOM 12 CG GLU A 458 -16.303 -1.409 -4.191 1.00 63.24 ATOM 13 CD GLU A 458 -16.249 -0.417 -3.032 1.00 65.72 ATOM 14 OE1 GLU A 458 -15.549 -0.696 -2.031 1.00 66.63 ATOM 15 OE2 GLU A 458 -16.907 0.645 -3.127 1.00 65.36 ATOM 16 N ASN A 459 -16.971 -5.358 -2.178 1.00 55.90 ATOM 17 CA ASN A 459 -17.501 -6.148 -1.064 1.00 55.49 ATOM 18 C ASN A 459 -16.541 -7.254 -0.648 1.00 53.23 ATOM 19 O ASN A 459 -15.840 -7.827 -1.482 1.00 53.10 ATOM 20 CB ASN A 459 -18.866 -6.748 -1.414 1.00 58.21 ATOM 21 CG ASN A 459 -18.781 -7.791 -2.503 1.00 60.75 ATOM 22 OD1 ASN A 459 -18.488 -7.473 -3.660 1.00 62.41 ATOM 23 ND2 ASN A 459 -19.029 -9.050 -2.140 1.00 59.74 ATOM 24 N SER A 460 -16.535 -7.558 0.646 1.00 50.49 ATOM 25 CA SER A 460 -15.635 -8.561 1.211 1.00 49.16 ATOM 26 C SER A 460 -15.693 -9.973 0.637 1.00 46.31 ATOM 27 O SER A 460 -14.657 -10.605 0.472 1.00 45.51 ATOM 28 CB SER A 460 -15.836 -8.647 2.724 1.00 48.11 ATOM 29 OG SER A 460 -16.993 -9.399 3.028 1.00 50.35 ATOM 30 N GLU A 461 -16.888 -10.476 0.351 1.00 45.43 ATOM 31 CA GLU A 461 -17.018 -11.830 -0.178 1.00 44.86 ATOM 32 C GLU A 461 -16.278 -12.018 -1.485 1.00 44.30 ATOM 33 O GLU A 461 -15.611 -13.034 -1.685 1.00 43.60 ATOM 34 CB GLU A 461 -18.490 -12.212 -0.375 1.00 45.49 ATOM 35 CG GLU A 461 -19.225 -12.487 0.920 1.00 47.12 ATOM 36 CD GLU A 461 -20.578 -13.140 0.713 1.00 47.70 ATOM 37 OE1 GLU A 461 -21.274 -13.377 1.724 1.00 48.91 ATOM 38 OE2 GLU A 461 -20.947 -13.418 -0.448 1.00 47.73 ATOM 39 N ASP A 462 -16.400 -11.045 -2.379 1.00 43.12 ATOM 40 CA ASP A 462 -15.730 -11.143 -3.659 1.00 43.19 ATOM 41 C ASP A 462 -14.245 -10.932 -3.485 1.00 42.06 ATOM 42 O ASP A 462 -13.440 -11.580 -4.154 1.00 43.18 ATOM 43 CB ASP A 462 -16.302 -10.128 -4.647 1.00 46.44 ATOM 44 CG ASP A 462 -17.709 -10.488 -5.093 1.00 48.32 ATOM 45 OD1 ASP A 462 -17.917 -11.652 -5.502 1.00 50.62 ATOM 46 OD2 ASP A 462 -18.600 -9.615 -5.038 1.00 50.35 ATOM 47 N LEU A 463 -13.881 -10.029 -2.581 1.00 39.57 ATOM 48 CA LEU A 463 -12.474 -9.757 -2.328 1.00 36.61 ATOM 49 C LEU A 463 -11.837 -11.056 -1.837 1.00 36.31 ATOM 50 O LEU A 463 -10.748 -11.433 -2.273 1.00 35.14 ATOM 51 CB LEU A 463 -12.326 -8.641 -1.282 1.00 32.40 ATOM 52 CG LEU A 463 -10.920 -8.137 -0.938 1.00 33.05 ATOM 53 CD1 LEU A 463 -10.160 -7.810 -2.234 1.00 31.66 ATOM 54 CD2 LEU A 463 -11.008 -6.898 -0.038 1.00 29.94 ATOM 55 N MET A 464 -12.537 -11.753 -0.948 1.00 35.42 ATOM 56 CA MET A 464 -12.036 -13.009 -0.416 1.00 36.75 ATOM 57 C MET A 464 -11.824 -14.020 -1.533 1.00 36.78 ATOM 58 O MET A 464 -10.854 -14.766 -1.512 1.00 37.53 ATOM 59 CB MET A 464 -13.001 -13.582 0.621 1.00 37.15 ATOM 60 CG MET A 464 -12.414 -14.733 1.430 1.00 40.91 ATOM 61 SD MET A 464 -10.792 -14.321 2.143 1.00 44.93 ATOM 62 CE MET A 464 -9.770 -15.538 1.365 1.00 43.17 ATOM 63 N LYS A 465 -12.738 -14.060 -2.500 1.00 37.57 ATOM 64 CA LYS A 465 -12.590 -14.985 -3.621 1.00 38.75 ATOM 65 C LYS A 465 -11.350 -14.567 -4.385 1.00 36.57 ATOM 66 O LYS A 465 -10.450 -15.370 -4.602 1.00 36.97 ATOM 67 CB LYS A 465 -13.789 -14.925 -4.573 1.00 42.38 ATOM 68 CG LYS A 465 -15.066 -15.583 -4.067 1.00 48.25 ATOM 69 CD LYS A 465 -16.125 -15.584 -5.171 1.00 52.01 ATOM 70 CE LYS A 465 -17.502 -15.977 -4.650 1.00 54.96 ATOM 71 NZ LYS A 465 -18.551 -15.879 -5.717 1.00 55.26 ATOM 72 N GLN A 466 -11.315 -13.296 -4.781 1.00 35.48 ATOM 73 CA GLN A 466 -10.191 -12.740 -5.530 1.00 35.59 ATOM 74 C GLN A 466 -8.860 -13.130 -4.879 1.00 35.03 ATOM 75 O GLN A 466 -7.938 -13.603 -5.558 1.00 34.90 ATOM 76 CB GLN A 466 -10.333 -11.218 -5.619 1.00 33.93 ATOM 77 CG GLN A 466 -9.274 -10.539 -6.461 1.00 37.31 ATOM 78 CD GLN A 466 -9.661 -9.119 -6.863 1.00 39.24 ATOM 79 OE1 GLN A 466 -10.347 -8.411 -6.122 1.00 38.88 ATOM 80 NE2 GLN A 466 -9.206 -8.694 -8.037 1.00 39.19 ATOM 81 N ILE A 467 -8.779 -12.960 -3.562 1.00 33.69 ATOM 82 CA ILE A 467 -7.579 -13.306 -2.809 1.00 32.62 ATOM 83 C ILE A 467 -7.291 -14.806 -2.921 1.00 34.27 ATOM 84 O ILE A 467 -6.142 -15.203 -3.116 1.00 34.27 ATOM 85 CB ILE A 467 -7.727 -12.891 -1.321 1.00 31.22 ATOM 86 CG1 ILE A 467 -7.696 -11.365 -1.224 1.00 29.47 ATOM 87 CG2 ILE A 467 -6.628 -13.534 -0.456 1.00 30.40 ATOM 88 CD1 ILE A 467 -7.921 -10.826 0.176 1.00 30.90 ATOM 89 N LEU A 468 -8.324 -15.639 -2.804 1.00 33.72 ATOM 90 CA LEU A 468 -8.131 -17.084 -2.925 1.00 34.82 ATOM 91 C LEU A 468 -7.750 -17.432 -4.368 1.00 34.89 ATOM 92 O LEU A 468 -7.011 -18.383 -4.619 1.00 33.77 ATOM 93 CB LEU A 468 -9.407 -17.847 -2.548 1.00 36.33 ATOM 94 CG LEU A 468 -9.817 -17.950 -1.075 1.00 37.74 ATOM 95 CD1 LEU A 468 -11.146 -18.683 -0.968 1.00 37.74 ATOM 96 CD2 LEU A 468 -8.755 -18.697 -0.294 1.00 37.56 ATOM 97 N GLN A 469 -8.260 -16.653 -5.314 1.00 34.32 ATOM 98 CA GLN A 469 -7.969 -16.887 -6.720 1.00 36.27 ATOM 99 C GLN A 469 -6.522 -16.543 -7.045 1.00 34.66 ATOM 100 O GLN A 469 -5.824 -17.319 -7.690 1.00 33.21 ATOM 101 CB GLN A 469 -8.910 -16.062 -7.605 1.00 38.42 ATOM 102 CG GLN A 469 -8.577 -16.155 -9.085 1.00 42.86 ATOM 103 CD GLN A 469 -9.813 -16.111 -9.966 1.00 47.87 ATOM 104 OE1 GLN A 469 -10.641 -17.036 -9.952 1.00 47.36 ATOM 105 NE2 GLN A 469 -9.950 -15.032 -10.740 1.00 47.64 ATOM 106 N ILE A 470 -6.087 -15.370 -6.593 1.00 34.66 ATOM 107 CA ILE A 470 -4.725 -14.911 -6.814 1.00 32.43 ATOM 108 C ILE A 470 -3.720 -15.786 -6.070 1.00 32.75 ATOM 109 O ILE A 470 -2.624 -16.043 -6.562 1.00 33.24 ATOM 110 CB ILE A 470 -4.561 -13.458 -6.360 1.00 31.61 ATOM 111 CG1 ILE A 470 -5.379 -12.548 -7.281 1.00 31.79 ATOM 112 CG2 ILE A 470 -3.087 -13.074 -6.352 1.00 32.19 ATOM 113 CD1 ILE A 470 -5.209 -11.064 -7.022 1.00 30.36 ATOM 114 N HIS A 471 -4.098 -16.245 -4.885 1.00 32.34 ATOM 115 CA HIS A 471 -3.229 -17.100 -4.091 1.00 32.06 ATOM 116 C HIS A 471 -2.952 -18.393 -4.864 1.00 32.84 ATOM 117 O HIS A 471 -1.803 -18.813 -5.016 1.00 30.73 ATOM 118 CB HIS A 471 -3.908 -17.422 -2.762 1.00 33.42 ATOM 119 CG HIS A 471 -3.108 -18.318 -1.872 1.00 35.33 ATOM 120 ND1 HIS A 471 -2.031 -17.868 -1.137 1.00 35.26 ATOM 121 CD2 HIS A 471 -3.225 -19.640 -1.602 1.00 35.77 ATOM 122 CE1 HIS A 471 -1.520 -18.875 -0.451 1.00 36.50 ATOM 123 NE2 HIS A 471 -2.226 -19.961 -0.715 1.00 38.26 ATOM 124 N SER A 472 -4.020 -19.021 -5.350 1.00 33.80 ATOM 125 CA SER A 472 -3.910 -20.265 -6.104 1.00 35.10 ATOM 126 C SER A 472 -3.158 -20.032 -7.417 1.00 34.39 ATOM 127 O SER A 472 -2.382 -20.878 -7.864 1.00 33.48 ATOM 128 CB SER A 472 -5.305 -20.830 -6.386 1.00 36.26 ATOM 129 OG SER A 472 -5.219 -22.107 -6.992 1.00 40.78 ATOM 130 N TRP A 473 -3.388 -18.880 -8.034 1.00 34.75 ATOM 131 CA TRP A 473 -2.704 -18.555 -9.275 1.00 35.60 ATOM 132 C TRP A 473 -1.204 -18.451 -9.022 1.00 34.81 ATOM 133 O TRP A 473 -0.389 -18.934 -9.813 1.00 35.34 ATOM 134 CB TRP A 473 -3.195 -17.220 -9.837 1.00 37.91 ATOM 135 CG TRP A 473 -2.321 -16.745 -10.954 1.00 39.36 ATOM 136 CD1 TRP A 473 -2.383 -17.129 -12.262 1.00 40.21 ATOM 137 CD2 TRP A 473 -1.164 -15.910 -10.835 1.00 39.89 ATOM 138 NE1 TRP A 473 -1.333 -16.594 -12.963 1.00 41.29 ATOM 139 CE2 TRP A 473 -0.567 -15.840 -12.112 1.00 41.09 ATOM 140 CE3 TRP A 473 -0.569 -15.219 -9.769 1.00 40.90 ATOM 141 CZ2 TRP A 473 0.601 -15.104 -12.357 1.00 40.87 ATOM 142 CZ3 TRP A 473 0.595 -14.486 -10.010 1.00 41.86 ATOM 143 CH2 TRP A 473 1.165 -14.437 -11.298 1.00 42.63 ATOM 144 N ALA A 474 -0.854 -17.808 -7.915 1.00 33.04 ATOM 145 CA ALA A 474 0.538 -17.600 -7.544 1.00 32.82 ATOM 146 C ALA A 474 1.283 -18.892 -7.235 1.00 33.20 ATOM 147 O ALA A 474 2.423 -19.073 -7.674 1.00 31.67 ATOM 148 CB ALA A 474 0.613 -16.644 -6.360 1.00 31.44 ATOM 149 N LYS A 475 0.653 -19.791 -6.481 1.00 34.94 ATOM 150 CA LYS A 475 1.294 -21.061 -6.156 1.00 35.73 ATOM 151 C LYS A 475 1.465 -21.876 -7.427 1.00 37.08 ATOM 152 O LYS A 475 2.502 -22.517 -7.626 1.00 36.70 ATOM 153 CB LYS A 475 0.470 -21.867 -5.153 1.00 36.37 ATOM 154 CG LYS A 475 0.482 -21.332 -3.736 1.00 37.96 ATOM 155 CD LYS A 475 0.049 -22.411 -2.747 1.00 39.52 ATOM 156 CE LYS A 475 -1.348 -22.944 -3.068 1.00 42.34 ATOM 157 NZ LYS A 475 -1.736 -24.079 -2.169 1.00 45.11 ATOM 158 N ASP A 476 0.446 -21.855 -8.286 1.00 38.58 ATOM 159 CA ASP A 476 0.514 -22.595 -9.544 1.00 39.44 ATOM 160 C ASP A 476 1.627 -22.052 -10.430 1.00 37.99 ATOM 161 O ASP A 476 2.356 -22.818 -11.063 1.00 36.49 ATOM 162 CB ASP A 476 -0.821 -22.539 -10.295 1.00 41.72 ATOM 163 CG ASP A 476 -1.887 -23.422 -9.660 1.00 45.64 ATOM 164 OD1 ASP A 476 -1.526 -24.496 -9.122 1.00 46.07 ATOM 165 OD2 ASP A 476 -3.084 -23.049 -9.712 1.00 46.12 ATOM 166 N LYS A 477 1.764 -20.731 -10.466 1.00 37.18 ATOM 167 CA LYS A 477 2.802 -20.111 -11.276 1.00 37.85 ATOM 168 C LYS A 477 4.193 -20.515 -10.781 1.00 37.77 ATOM 169 O LYS A 477 5.054 -20.891 -11.574 1.00 38.99 ATOM 170 CB LYS A 477 2.661 -18.587 -11.251 1.00 37.95 ATOM 171 CG LYS A 477 3.747 -17.858 -12.041 1.00 40.09 ATOM 172 CD LYS A 477 3.713 -18.215 -13.525 1.00 39.60 ATOM 173 CE LYS A 477 2.500 -17.610 -14.208 1.00 41.31 ATOM 174 NZ LYS A 477 2.447 -17.933 -15.665 1.00 42.20 ATOM 175 N ALA A 478 4.407 -20.440 -9.470 1.00 37.07 ATOM 176 CA ALA A 478 5.695 -20.810 -8.886 1.00 37.00 ATOM 177 C ALA A 478 6.044 -22.249 -9.236 1.00 37.00 ATOM 178 O ALA A 478 7.203 -22.568 -9.476 1.00 36.48 ATOM 179 CB ALA A 478 5.664 -20.636 -7.366 1.00 36.38 ATOM 180 N THR A 479 5.034 -23.114 -9.270 1.00 38.36 ATOM 181 CA THR A 479 5.253 -24.521 -9.594 1.00 40.48 ATOM 182 C THR A 479 5.682 -24.697 -11.049 1.00 39.82 ATOM 183 O THR A 479 6.539 -25.527 -11.351 1.00 39.92 ATOM 184 CB THR A 479 3.984 -25.368 -9.348 1.00 40.33 ATOM 185 OG1 THR A 479 3.502 -25.131 -8.020 1.00 42.59 ATOM 186 CG2 THR A 479 4.301 -26.850 -9.498 1.00 39.77 ATOM 187 N ASP A 480 5.085 -23.913 -11.942 1.00 39.72 ATOM 188 CA ASP A 480 5.418 -23.975 -13.360 1.00 41.69 ATOM 189 C ASP A 480 6.882 -23.650 -13.565 1.00 41.19 ATOM 190 O ASP A 480 7.596 -24.372 -14.260 1.00 41.24 ATOM 191 CB ASP A 480 4.564 -22.988 -14.152 1.00 43.98 ATOM 192 CG ASP A 480 3.110 -23.383 -14.178 1.00 47.57 ATOM 193 OD1 ASP A 480 2.282 -22.574 -14.660 1.00 50.36 ATOM 194 OD2 ASP A 480 2.800 -24.509 -13.716 1.00 46.81 ATOM 195 N ILE A 481 7.318 -22.555 -12.951 1.00 41.02 ATOM 196 CA ILE A 481 8.703 -22.117 -13.043 1.00 38.92 ATOM 197 C ILE A 481 9.623 -23.218 -12.524 1.00 40.09 ATOM 198 O ILE A 481 10.690 -23.478 -13.091 1.00 39.12 ATOM 199 CB ILE A 481 8.896 -20.809 -12.247 1.00 38.90 ATOM 200 CG1 ILE A 481 8.144 -19.682 -12.965 1.00 37.09 ATOM 201 CG2 ILE A 481 10.371 -20.496 -12.080 1.00 36.29 ATOM 202 CD1 ILE A 481 8.102 -18.374 -12.224 1.00 37.69 ATOM 203 N TYR A 482 9.205 -23.881 -11.452 1.00 40.03 ATOM 204 CA TYR A 482 10.005 -24.964 -10.912 1.00 40.46 ATOM 205 C TYR A 482 10.106 -26.098 -11.935 1.00 43.27 ATOM 206 O TYR A 482 11.172 -26.693 -12.113 1.00 43.10 ATOM 207 CB TYR A 482 9.383 -25.508 -9.628 1.00 38.61 ATOM 208 CG TYR A 482 9.961 -26.843 -9.232 1.00 35.49 ATOM 209 CD1 TYR A 482 11.307 -26.968 -8.911 1.00 35.68 ATOM 210 CD2 TYR A 482 9.175 -27.991 -9.230 1.00 36.96 ATOM 211 CE1 TYR A 482 11.862 -28.204 -8.600 1.00 36.64 ATOM 212 CE2 TYR A 482 9.719 -29.237 -8.922 1.00 37.41 ATOM 213 CZ TYR A 482 11.065 -29.335 -8.607 1.00 38.11 ATOM 214 OH TYR A 482 11.620 -30.555 -8.288 1.00 38.48 ATOM 215 N ASN A 483 8.993 -26.396 -12.603 1.00 45.16 ATOM 216 CA ASN A 483 8.965 -27.472 -13.590 1.00 47.67 ATOM 217 C ASN A 483 9.781 -27.161 -14.843 1.00 50.83 ATOM 218 O ASN A 483 10.614 -27.965 -15.263 1.00 49.63 ATOM 219 CB ASN A 483 7.518 -27.805 -13.975 1.00 45.64 ATOM 220 CG ASN A 483 6.730 -28.403 -12.820 1.00 43.17 ATOM 221 OD1 ASN A 483 7.275 -29.152 -12.012 1.00 41.87 ATOM 222 ND2 ASN A 483 5.440 -28.091 -12.750 1.00 39.02 ATOM 223 N LYS A 484 9.547 -25.998 -15.438 1.00 55.47 ATOM 224 CA LYS A 484 10.284 -25.603 -16.633 1.00 60.58 ATOM 225 C LYS A 484 11.783 -25.729 -16.371 1.00 63.48 ATOM 226 O LYS A 484 12.565 -25.992 -17.285 1.00 63.98 ATOM 227 CB LYS A 484 9.948 -24.158 -17.006 1.00 61.82 ATOM 228 CG LYS A 484 8.465 -23.905 -17.243 1.00 65.87 ATOM 229 CD LYS A 484 8.172 -22.408 -17.315 1.00 68.62 ATOM 230 CE LYS A 484 6.675 -22.124 -17.354 1.00 69.13 ATOM 231 NZ LYS A 484 6.402 -20.663 -17.222 1.00 68.93 ATOM 232 N HIS A 485 12.173 -25.546 -15.113 1.00 66.56 ATOM 233 CA HIS A 485 13.572 -25.631 -14.714 1.00 70.31 ATOM 234 C HIS A 485 14.038 -27.066 -14.479 1.00 71.72 ATOM 235 O HIS A 485 15.183 -27.409 -14.784 1.00 71.57 ATOM 236 CB HIS A 485 13.802 -24.794 -13.453 1.00 73.12 ATOM 237 CG HIS A 485 15.109 -25.063 -12.773 1.00 76.78 ATOM 238 ND1 HIS A 485 15.338 -26.200 -12.026 1.00 78.02 ATOM 239 CD2 HIS A 485 16.255 -24.342 -12.723 1.00 77.85 ATOM 240 CE1 HIS A 485 16.568 -26.166 -11.544 1.00 78.74 ATOM 241 NE2 HIS A 485 17.145 -25.049 -11.952 1.00 79.13 ATOM 242 N ASN A 486 13.154 -27.898 -13.933 1.00 73.35 ATOM 243 CA ASN A 486 13.482 -29.296 -13.662 1.00 74.64 ATOM 244 C ASN A 486 12.985 -30.201 -14.798 1.00 75.22 ATOM 245 O ASN A 486 12.396 -29.669 -15.764 1.00 75.41 ATOM 246 CB ASN A 486 12.859 -29.731 -12.328 1.00 74.60 ATOM 247 CG ASN A 486 13.405 -31.062 -11.832 1.00 76.09 ATOM 248 OD1 ASN A 486 14.612 -31.214 -11.631 1.00 76.82 ATOM 249 ND2 ASN A 486 12.517 -32.032 -11.628 1.00 75.45 TER