HEADER ISOMERASE/ISOMERASE INHIBITOR 25-JUL-12 4GAE TITLE Crystal structure of plasmodium dxr in complex with a TITLE 2 pyridine-containing inhibitor COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, COMPND 3 CHAIN: A, B; COMPND 4 MUTATION: YES; COMPND 5 EC: 1.1.1.267; COMPND 6 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.30 ANGSTORMS DBREF 4GAE B 75 488 UNP O96693 DXR_PLAFX 75 488 SEQRES 1 B 30 SER GLU ASN SER GLU ASP LEU MET LYS GLN ILE LEU GLN SEQRES 2 B 30 ILE HIS SER TRP ALA LYS ASP LYS ALA THR ASP ILE TYR SEQRES 3 B 30 ASN LYS HIS ASN ATOM 1 N SER B 457 7.712 15.446 61.744 1.00 49.00 ATOM 2 CA SER B 457 6.686 16.443 62.042 1.00 52.03 ATOM 3 C SER B 457 5.393 16.092 61.320 1.00 54.18 ATOM 4 O SER B 457 5.412 15.438 60.273 1.00 53.83 ATOM 5 CB SER B 457 7.150 17.838 61.618 1.00 52.71 ATOM 6 OG SER B 457 8.264 18.262 62.386 1.00 53.88 ATOM 7 N GLU B 458 4.272 16.541 61.876 1.00 56.93 ATOM 8 CA GLU B 458 2.956 16.250 61.313 1.00 58.34 ATOM 9 C GLU B 458 2.507 17.162 60.170 1.00 57.22 ATOM 10 O GLU B 458 1.911 16.691 59.206 1.00 57.20 ATOM 11 CB GLU B 458 1.914 16.271 62.433 1.00 61.36 ATOM 12 CG GLU B 458 2.244 15.329 63.593 1.00 66.47 ATOM 13 CD GLU B 458 2.095 13.854 63.231 1.00 69.36 ATOM 14 OE1 GLU B 458 2.590 13.440 62.157 1.00 70.16 ATOM 15 OE2 GLU B 458 1.487 13.108 64.031 1.00 70.24 ATOM 16 N ASN B 459 2.781 18.458 60.273 1.00 56.18 ATOM 17 CA ASN B 459 2.380 19.395 59.221 1.00 55.96 ATOM 18 C ASN B 459 3.573 19.879 58.400 1.00 54.69 ATOM 19 O ASN B 459 4.678 20.019 58.919 1.00 54.41 ATOM 20 CB ASN B 459 1.662 20.594 59.834 1.00 56.66 ATOM 21 CG ASN B 459 2.520 21.325 60.834 1.00 58.15 ATOM 22 OD1 ASN B 459 3.012 20.728 61.795 1.00 59.08 ATOM 23 ND2 ASN B 459 2.711 22.624 60.618 1.00 57.05 ATOM 24 N SER B 460 3.330 20.148 57.120 1.00 54.47 ATOM 25 CA SER B 460 4.362 20.598 56.186 1.00 53.55 ATOM 26 C SER B 460 5.259 21.735 56.668 1.00 53.64 ATOM 27 O SER B 460 6.468 21.695 56.462 1.00 53.11 ATOM 28 CB SER B 460 3.715 21.001 54.862 1.00 53.66 ATOM 29 OG SER B 460 2.769 22.035 55.060 1.00 54.21 ATOM 30 N GLU B 461 4.671 22.750 57.297 1.00 53.67 ATOM 31 CA GLU B 461 5.441 23.893 57.791 1.00 53.41 ATOM 32 C GLU B 461 6.573 23.460 58.709 1.00 51.48 ATOM 33 O GLU B 461 7.722 23.838 58.507 1.00 51.32 ATOM 34 CB GLU B 461 4.535 24.874 58.553 1.00 57.41 ATOM 35 CG GLU B 461 3.653 25.796 57.693 1.00 61.18 ATOM 36 CD GLU B 461 4.340 27.111 57.308 1.00 63.49 ATOM 37 OE1 GLU B 461 4.946 27.761 58.193 1.00 63.02 ATOM 38 OE2 GLU B 461 4.257 27.500 56.120 1.00 64.14 ATOM 39 N ASP B 462 6.245 22.672 59.726 1.00 50.32 ATOM 40 CA ASP B 462 7.252 22.213 60.674 1.00 49.80 ATOM 41 C ASP B 462 8.193 21.193 60.046 1.00 47.65 ATOM 42 O ASP B 462 9.397 21.200 60.310 1.00 47.44 ATOM 43 CB ASP B 462 6.593 21.597 61.916 1.00 51.26 ATOM 44 CG ASP B 462 5.699 22.578 62.658 1.00 52.99 ATOM 45 OD1 ASP B 462 6.061 23.773 62.757 1.00 52.44 ATOM 46 OD2 ASP B 462 4.637 22.146 63.154 1.00 53.44 ATOM 47 N LEU B 463 7.641 20.315 59.217 1.00 45.10 ATOM 48 CA LEU B 463 8.440 19.292 58.564 1.00 42.71 ATOM 49 C LEU B 463 9.505 19.942 57.688 1.00 41.41 ATOM 50 O LEU B 463 10.580 19.394 57.503 1.00 41.84 ATOM 51 CB LEU B 463 7.544 18.378 57.731 1.00 41.15 ATOM 52 CG LEU B 463 8.252 17.284 56.929 1.00 42.20 ATOM 53 CD1 LEU B 463 9.310 16.590 57.784 1.00 40.62 ATOM 54 CD2 LEU B 463 7.217 16.298 56.428 1.00 41.39 ATOM 55 N MET B 464 9.193 21.125 57.171 1.00 41.18 ATOM 56 CA MET B 464 10.101 21.880 56.322 1.00 40.26 ATOM 57 C MET B 464 11.258 22.440 57.141 1.00 40.21 ATOM 58 O MET B 464 12.421 22.320 56.754 1.00 39.64 ATOM 59 CB MET B 464 9.347 23.031 55.650 1.00 43.26 ATOM 60 CG MET B 464 10.196 23.912 54.742 1.00 46.41 ATOM 61 SD MET B 464 10.979 22.983 53.400 1.00 52.01 ATOM 62 CE MET B 464 12.708 23.189 53.790 1.00 52.64 ATOM 63 N LYS B 465 10.940 23.062 58.270 1.00 38.69 ATOM 64 CA LYS B 465 11.974 23.631 59.121 1.00 38.83 ATOM 65 C LYS B 465 12.839 22.533 59.729 1.00 35.00 ATOM 66 O LYS B 465 13.990 22.765 60.083 1.00 33.01 ATOM 67 CB LYS B 465 11.346 24.492 60.226 1.00 43.59 ATOM 68 CG LYS B 465 10.676 25.772 59.698 1.00 50.02 ATOM 69 CD LYS B 465 10.105 26.642 60.818 1.00 53.36 ATOM 70 CE LYS B 465 9.407 27.875 60.255 1.00 55.88 ATOM 71 NZ LYS B 465 8.697 28.660 61.308 1.00 57.44 ATOM 72 N GLN B 466 12.274 21.338 59.842 1.00 31.31 ATOM 73 CA GLN B 466 12.997 20.205 60.396 1.00 30.16 ATOM 74 C GLN B 466 14.025 19.745 59.365 1.00 29.85 ATOM 75 O GLN B 466 15.196 19.541 59.685 1.00 28.48 ATOM 76 CB GLN B 466 12.018 19.081 60.719 1.00 27.81 ATOM 77 CG GLN B 466 12.649 17.867 61.336 1.00 27.80 ATOM 78 CD GLN B 466 11.619 16.918 61.915 1.00 29.35 ATOM 79 OE1 GLN B 466 10.510 16.785 61.390 1.00 24.00 ATOM 80 NE2 GLN B 466 11.987 16.237 62.998 1.00 28.85 ATOM 81 N ILE B 467 13.573 19.599 58.121 1.00 30.37 ATOM 82 CA ILE B 467 14.436 19.189 57.024 1.00 30.20 ATOM 83 C ILE B 467 15.587 20.184 56.905 1.00 30.60 ATOM 84 O ILE B 467 16.737 19.795 56.735 1.00 30.45 ATOM 85 CB ILE B 467 13.644 19.130 55.691 1.00 30.52 ATOM 86 CG1 ILE B 467 12.578 18.037 55.781 1.00 30.34 ATOM 87 CG2 ILE B 467 14.578 18.843 54.519 1.00 27.16 ATOM 88 CD1 ILE B 467 11.646 17.986 54.585 1.00 31.87 ATOM 89 N LEU B 468 15.278 21.470 57.017 1.00 31.58 ATOM 90 CA LEU B 468 16.307 22.501 56.930 1.00 33.38 ATOM 91 C LEU B 468 17.314 22.358 58.083 1.00 32.44 ATOM 92 O LEU B 468 18.523 22.382 57.872 1.00 30.34 ATOM 93 CB LEU B 468 15.656 23.889 56.966 1.00 36.13 ATOM 94 CG LEU B 468 16.587 25.108 56.993 1.00 40.88 ATOM 95 CD1 LEU B 468 17.407 25.178 55.706 1.00 42.96 ATOM 96 CD2 LEU B 468 15.755 26.377 57.166 1.00 41.08 ATOM 97 N GLN B 469 16.805 22.195 59.298 1.00 31.04 ATOM 98 CA GLN B 469 17.652 22.056 60.474 1.00 33.41 ATOM 99 C GLN B 469 18.587 20.847 60.393 1.00 30.85 ATOM 100 O GLN B 469 19.758 20.947 60.734 1.00 29.48 ATOM 101 CB GLN B 469 16.783 21.963 61.738 1.00 37.13 ATOM 102 CG GLN B 469 17.534 21.564 63.005 1.00 43.26 ATOM 103 CD GLN B 469 16.612 21.473 64.222 1.00 50.84 ATOM 104 OE1 GLN B 469 15.490 20.954 64.135 1.00 50.97 ATOM 105 NE2 GLN B 469 17.088 21.967 65.365 1.00 51.86 ATOM 106 N ILE B 470 18.059 19.712 59.949 1.00 28.96 ATOM 107 CA ILE B 470 18.843 18.491 59.826 1.00 27.83 ATOM 108 C ILE B 470 19.860 18.623 58.693 1.00 26.99 ATOM 109 O ILE B 470 20.984 18.132 58.793 1.00 24.73 ATOM 110 CB ILE B 470 17.922 17.279 59.572 1.00 28.07 ATOM 111 CG1 ILE B 470 17.079 17.012 60.824 1.00 29.32 ATOM 112 CG2 ILE B 470 18.735 16.058 59.223 1.00 27.81 ATOM 113 CD1 ILE B 470 16.203 15.785 60.729 1.00 29.85 ATOM 114 N HIS B 471 19.456 19.296 57.623 1.00 25.98 ATOM 115 CA HIS B 471 20.333 19.520 56.477 1.00 26.49 ATOM 116 C HIS B 471 21.558 20.319 56.923 1.00 27.82 ATOM 117 O HIS B 471 22.698 19.908 56.686 1.00 27.60 ATOM 118 CB HIS B 471 19.589 20.296 55.394 1.00 26.15 ATOM 119 CG HIS B 471 20.413 20.573 54.177 1.00 30.20 ATOM 120 ND1 HIS B 471 20.703 19.605 53.240 1.00 27.69 ATOM 121 CD2 HIS B 471 21.022 21.706 53.753 1.00 29.16 ATOM 122 CE1 HIS B 471 21.453 20.130 52.289 1.00 32.26 ATOM 123 NE2 HIS B 471 21.661 21.404 52.576 1.00 31.58 ATOM 124 N SER B 472 21.322 21.458 57.576 1.00 27.39 ATOM 125 CA SER B 472 22.416 22.305 58.057 1.00 27.99 ATOM 126 C SER B 472 23.301 21.531 59.018 1.00 26.91 ATOM 127 O SER B 472 24.526 21.616 58.951 1.00 25.06 ATOM 128 CB SER B 472 21.877 23.546 58.775 1.00 30.02 ATOM 129 OG SER B 472 20.976 24.256 57.942 1.00 37.60 ATOM 130 N TRP B 473 22.676 20.783 59.920 1.00 25.86 ATOM 131 CA TRP B 473 23.433 20.000 60.883 1.00 27.32 ATOM 132 C TRP B 473 24.350 18.980 60.196 1.00 27.51 ATOM 133 O TRP B 473 25.527 18.862 60.562 1.00 29.82 ATOM 134 CB TRP B 473 22.501 19.259 61.847 1.00 26.94 ATOM 135 CG TRP B 473 23.245 18.269 62.688 1.00 26.23 ATOM 136 CD1 TRP B 473 23.877 18.508 63.870 1.00 27.80 ATOM 137 CD2 TRP B 473 23.504 16.899 62.365 1.00 24.65 ATOM 138 NE1 TRP B 473 24.517 17.374 64.307 1.00 26.58 ATOM 139 CE2 TRP B 473 24.304 16.370 63.400 1.00 26.47 ATOM 140 CE3 TRP B 473 23.138 16.067 61.299 1.00 24.34 ATOM 141 CZ2 TRP B 473 24.748 15.043 63.403 1.00 25.92 ATOM 142 CZ3 TRP B 473 23.577 14.749 61.301 1.00 25.24 ATOM 143 CH2 TRP B 473 24.375 14.250 62.350 1.00 27.19 ATOM 144 N ALA B 474 23.819 18.242 59.218 1.00 24.63 ATOM 145 CA ALA B 474 24.621 17.239 58.508 1.00 25.78 ATOM 146 C ALA B 474 25.823 17.889 57.819 1.00 26.56 ATOM 147 O ALA B 474 26.914 17.333 57.811 1.00 26.90 ATOM 148 CB ALA B 474 23.773 16.502 57.485 1.00 24.31 ATOM 149 N LYS B 475 25.622 19.065 57.238 1.00 27.40 ATOM 150 CA LYS B 475 26.719 19.766 56.585 1.00 30.47 ATOM 151 C LYS B 475 27.773 20.231 57.601 1.00 31.14 ATOM 152 O LYS B 475 28.974 20.062 57.371 1.00 31.25 ATOM 153 CB LYS B 475 26.187 20.956 55.791 1.00 30.56 ATOM 154 CG LYS B 475 25.391 20.539 54.564 1.00 34.06 ATOM 155 CD LYS B 475 24.720 21.720 53.903 1.00 35.86 ATOM 156 CE LYS B 475 25.703 22.818 53.549 1.00 37.85 ATOM 157 NZ LYS B 475 24.978 24.027 53.042 1.00 42.78 ATOM 158 N ASP B 476 27.345 20.807 58.723 1.00 31.46 ATOM 159 CA ASP B 476 28.323 21.246 59.723 1.00 32.73 ATOM 160 C ASP B 476 29.089 20.035 60.245 1.00 30.92 ATOM 161 O ASP B 476 30.294 20.106 60.458 1.00 29.79 ATOM 162 CB ASP B 476 27.655 21.973 60.898 1.00 35.32 ATOM 163 CG ASP B 476 27.126 23.350 60.515 1.00 40.00 ATOM 164 OD1 ASP B 476 27.819 24.078 59.764 1.00 39.86 ATOM 165 OD2 ASP B 476 26.018 23.711 60.976 1.00 42.23 ATOM 166 N LYS B 477 28.385 18.921 60.432 1.00 29.72 ATOM 167 CA LYS B 477 29.016 17.701 60.920 1.00 29.53 ATOM 168 C LYS B 477 30.061 17.190 59.928 1.00 30.30 ATOM 169 O LYS B 477 31.148 16.762 60.330 1.00 29.65 ATOM 170 CB LYS B 477 27.962 16.620 61.161 1.00 29.72 ATOM 171 CG LYS B 477 28.496 15.335 61.777 1.00 32.45 ATOM 172 CD LYS B 477 28.956 15.535 63.220 1.00 33.79 ATOM 173 CE LYS B 477 29.316 14.196 63.858 1.00 37.03 ATOM 174 NZ LYS B 477 29.810 14.330 65.266 1.00 39.32 ATOM 175 N ALA B 478 29.736 17.232 58.635 1.00 29.68 ATOM 176 CA ALA B 478 30.675 16.767 57.618 1.00 28.81 ATOM 177 C ALA B 478 31.920 17.632 57.677 1.00 28.46 ATOM 178 O ALA B 478 33.035 17.127 57.757 1.00 28.54 ATOM 179 CB ALA B 478 30.052 16.841 56.228 1.00 26.91 ATOM 180 N THR B 479 31.722 18.942 57.639 1.00 29.81 ATOM 181 CA THR B 479 32.834 19.880 57.698 1.00 30.26 ATOM 182 C THR B 479 33.664 19.612 58.959 1.00 32.54 ATOM 183 O THR B 479 34.893 19.563 58.904 1.00 30.68 ATOM 184 CB THR B 479 32.311 21.333 57.697 1.00 30.02 ATOM 185 OG1 THR B 479 31.763 21.635 56.408 1.00 29.47 ATOM 186 CG2 THR B 479 33.422 22.314 58.016 1.00 30.32 ATOM 187 N ASP B 480 32.987 19.407 60.089 1.00 33.83 ATOM 188 CA ASP B 480 33.677 19.143 61.346 1.00 35.70 ATOM 189 C ASP B 480 34.555 17.887 61.278 1.00 36.88 ATOM 190 O ASP B 480 35.705 17.904 61.721 1.00 34.31 ATOM 191 CB ASP B 480 32.663 19.015 62.478 1.00 39.72 ATOM 192 CG ASP B 480 33.322 18.801 63.824 1.00 45.45 ATOM 193 OD1 ASP B 480 33.862 17.692 64.047 1.00 47.20 ATOM 194 OD2 ASP B 480 33.307 19.745 64.652 1.00 46.56 ATOM 195 N ILE B 481 34.015 16.801 60.729 1.00 37.00 ATOM 196 CA ILE B 481 34.782 15.563 60.601 1.00 37.81 ATOM 197 C ILE B 481 36.004 15.839 59.753 1.00 38.99 ATOM 198 O ILE B 481 37.078 15.303 60.001 1.00 40.06 ATOM 199 CB ILE B 481 33.976 14.449 59.922 1.00 36.38 ATOM 200 CG1 ILE B 481 32.904 13.924 60.879 1.00 35.20 ATOM 201 CG2 ILE B 481 34.915 13.330 59.485 1.00 36.53 ATOM 202 CD1 ILE B 481 31.954 12.934 60.241 1.00 32.76 ATOM 203 N TYR B 482 35.823 16.672 58.737 1.00 40.36 ATOM 204 CA TYR B 482 36.918 17.045 57.864 1.00 41.70 ATOM 205 C TYR B 482 37.919 17.909 58.621 1.00 44.57 ATOM 206 O TYR B 482 39.113 17.624 58.609 1.00 44.58 ATOM 207 CB TYR B 482 36.407 17.827 56.661 1.00 39.01 ATOM 208 CG TYR B 482 37.497 18.612 55.986 1.00 38.78 ATOM 209 CD1 TYR B 482 38.552 17.964 55.342 1.00 38.72 ATOM 210 CD2 TYR B 482 37.510 20.005 56.041 1.00 37.91 ATOM 211 CE1 TYR B 482 39.597 18.682 54.774 1.00 38.36 ATOM 212 CE2 TYR B 482 38.547 20.735 55.477 1.00 38.16 ATOM 213 CZ TYR B 482 39.588 20.066 54.844 1.00 39.68 ATOM 214 OH TYR B 482 40.616 20.781 54.279 1.00 39.11 ATOM 215 N ASN B 483 37.430 18.964 59.276 1.00 48.00 ATOM 216 CA ASN B 483 38.302 19.871 60.023 1.00 51.24 ATOM 217 C ASN B 483 39.259 19.162 60.969 1.00 54.34 ATOM 218 O ASN B 483 40.308 19.702 61.307 1.00 55.14 ATOM 219 CB ASN B 483 37.484 20.909 60.792 1.00 49.72 ATOM 220 CG ASN B 483 37.080 22.089 59.923 1.00 49.52 ATOM 221 OD1 ASN B 483 37.584 22.258 58.808 1.00 47.87 ATOM 222 ND2 ASN B 483 36.178 22.920 60.436 1.00 48.48 ATOM 223 N LYS B 484 38.906 17.957 61.401 1.00 59.14 ATOM 224 CA LYS B 484 39.796 17.194 62.235 1.00 64.34 ATOM 225 C LYS B 484 40.814 16.523 61.308 1.00 68.49 ATOM 226 O LYS B 484 41.386 15.483 61.622 1.00 68.86 ATOM 227 CB LYS B 484 39.030 16.175 63.107 1.00 63.73 ATOM 228 CG LYS B 484 38.135 16.836 64.147 1.00 64.50 ATOM 229 CD LYS B 484 37.130 15.851 64.741 1.00 65.78 ATOM 230 CE LYS B 484 36.104 16.559 65.623 1.00 64.84 ATOM 231 NZ LYS B 484 34.958 15.664 65.961 1.00 63.53 ATOM 232 N HIS B 485 41.006 17.171 60.153 1.00 73.37 ATOM 233 CA HIS B 485 41.973 16.811 59.092 1.00 77.46 ATOM 234 C HIS B 485 41.913 15.380 58.548 1.00 79.57 ATOM 235 O HIS B 485 42.686 15.029 57.650 1.00 80.59 ATOM 236 CB HIS B 485 43.386 17.135 59.581 1.00 78.87 ATOM 237 CG HIS B 485 43.547 18.650 59.939 1.00 81.31 ATOM 238 ND1 HIS B 485 43.240 19.650 59.039 1.00 81.89 ATOM 239 CD2 HIS B 485 43.939 19.273 61.075 1.00 82.41 ATOM 240 CE1 HIS B 485 43.435 20.826 59.609 1.00 82.49 ATOM 241 NE2 HIS B 485 43.859 20.626 60.844 1.00 82.77 ATOM 242 N ASN B 486 41.011 14.553 59.070 1.00 81.13 ATOM 243 CA ASN B 486 40.954 13.166 58.604 1.00 82.56 ATOM 244 C ASN B 486 42.099 12.824 57.669 1.00 82.73 ATOM 245 O ASN B 486 42.987 12.049 58.024 1.00 82.52 ATOM 246 CB ASN B 486 39.590 12.892 57.973 1.00 82.85 ATOM 247 CG ASN B 486 39.303 13.652 56.672 1.00 82.78 ATOM 248 OD1 ASN B 486 39.321 14.883 56.638 1.00 82.33 ATOM 249 ND2 ASN B 486 39.055 12.909 55.596 1.00 81.86 ATOM 250 C ACT B 507 20.459 16.653 66.201 1.00 67.30 ATOM 251 O ACT B 507 20.322 17.034 65.049 1.00 65.87 ATOM 252 OXT ACT B 507 21.536 16.215 66.574 1.00 67.59 ATOM 253 CH3 ACT B 507 19.299 16.726 67.165 1.00 67.13 TER