HEADER ISOMERASE/DNA/INHIBITOR 31-DEC-69 4KPF TITLE Novel fluoroquinolones in complex with topoisomerase IV from S. TITLE 2 pneumoniae and E-site G-gate COMPND MOL_ID: 2; COMPND 2 MOLECULE: ParE30; COMPND 3 CHAIN: C, D; COMPND 4 FRAGMENT: ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.24 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER D 167 REMARK 465 LYS D 168 REMARK 465 GLY D 169 REMARK 465 LYS D 170 REMARK 465 GLY D 171 REMARK 465 LYS D 172 REMARK 465 LYS D 173 REMARK 465 GLU D 174 REMARK 465 GLU D 175 REMARK 465 VAL D 176 REMARK 465 PHE D 192 REMARK 465 GLY D 193 REMARK 465 LYS D 194 REMARK 465 GLY D 195 REMARK 465 ALA D 196 REMARK 465 THR D 197 DBREF 4KPF D 404 647 UNP Q59961 PARE_STRPN 404 647 SEQRES 1 D 42 PRO LEU TYR LYS MET SER LYS GLY LYS GLY LYS LYS GLU SEQRES 2 D 42 GLU VAL ALA TYR ALA TRP THR ASP GLY GLU LEU GLU GLU SEQRES 3 D 42 LEU ARG LYS GLN PHE GLY LYS GLY ALA THR LEU GLN ARG SEQRES 4 D 42 TYR LYS GLY ATOM 1 N PRO D 541 -62.763 88.635 -14.374 1.00123.41 ATOM 2 CA PRO D 541 -64.102 88.053 -14.256 1.00123.43 ATOM 3 C PRO D 541 -64.058 86.651 -13.668 1.00118.30 ATOM 4 O PRO D 541 -63.141 85.874 -13.958 1.00115.19 ATOM 5 CB PRO D 541 -64.585 88.001 -15.707 1.00128.37 ATOM 6 CG PRO D 541 -63.336 87.876 -16.504 1.00130.60 ATOM 7 CD PRO D 541 -62.288 88.670 -15.767 1.00127.78 ATOM 8 N LEU D 542 -65.045 86.332 -12.842 1.00118.94 ATOM 9 CA LEU D 542 -65.143 84.990 -12.293 1.00117.09 ATOM 10 C LEU D 542 -65.975 84.097 -13.214 1.00120.73 ATOM 11 O LEU D 542 -65.816 82.879 -13.193 1.00118.77 ATOM 12 CB LEU D 542 -65.723 85.000 -10.860 1.00110.04 ATOM 13 CG LEU D 542 -64.871 85.525 -9.686 1.00 98.65 ATOM 14 N TYR D 543 -66.836 84.695 -14.039 1.00126.35 ATOM 15 CA TYR D 543 -67.818 83.905 -14.794 1.00132.07 ATOM 16 C TYR D 543 -68.077 84.337 -16.247 1.00136.26 ATOM 17 O TYR D 543 -67.804 85.477 -16.621 1.00141.70 ATOM 18 CB TYR D 543 -69.137 83.863 -14.017 1.00135.63 ATOM 19 CG TYR D 543 -68.962 83.406 -12.588 1.00141.40 ATOM 20 CD1 TYR D 543 -68.869 82.056 -12.276 1.00143.02 ATOM 21 CD2 TYR D 543 -68.869 84.322 -11.552 1.00145.12 ATOM 22 CE1 TYR D 543 -68.701 81.630 -10.972 1.00143.67 ATOM 23 CE2 TYR D 543 -68.701 83.905 -10.242 1.00146.61 ATOM 24 CZ TYR D 543 -68.619 82.558 -9.957 1.00145.93 ATOM 25 OH TYR D 543 -68.453 82.134 -8.655 1.00147.95 ATOM 26 N LYS D 544 -68.600 83.406 -17.052 1.00134.62 ATOM 27 CA LYS D 544 -69.073 83.680 -18.422 1.00133.13 ATOM 28 C LYS D 544 -70.154 82.669 -18.840 1.00132.95 ATOM 29 O LYS D 544 -69.915 81.460 -18.801 1.00135.57 ATOM 30 CB LYS D 544 -67.915 83.651 -19.428 1.00130.24 ATOM 31 N MET D 545 -71.330 83.156 -19.245 1.00128.66 ATOM 32 CA MET D 545 -72.456 82.267 -19.570 1.00126.26 ATOM 33 C MET D 545 -72.816 82.220 -21.069 1.00126.89 ATOM 34 O MET D 545 -72.326 83.011 -21.880 1.00122.72 ATOM 35 CB MET D 545 -73.695 82.620 -18.725 1.00120.43 ATOM 36 CG MET D 545 -74.671 81.459 -18.494 1.00115.24 ATOM 37 N ALA D 556 -72.065 86.798 -21.807 1.00137.79 ATOM 38 CA ALA D 556 -71.632 87.952 -21.019 1.00138.76 ATOM 39 C ALA D 556 -70.767 87.551 -19.815 1.00138.61 ATOM 40 O ALA D 556 -70.276 86.420 -19.740 1.00134.81 ATOM 41 CB ALA D 556 -72.835 88.784 -20.572 1.00139.46 ATOM 42 N TYR D 557 -70.592 88.481 -18.876 1.00140.46 ATOM 43 CA TYR D 557 -69.674 88.284 -17.755 1.00138.51 ATOM 44 C TYR D 557 -70.251 88.719 -16.401 1.00140.44 ATOM 45 O TYR D 557 -71.057 89.647 -16.329 1.00144.07 ATOM 46 CB TYR D 557 -68.361 89.029 -18.021 1.00136.42 ATOM 47 CG TYR D 557 -67.544 88.480 -19.178 1.00134.44 ATOM 48 CD1 TYR D 557 -67.770 88.908 -20.483 1.00133.85 ATOM 49 CD2 TYR D 557 -66.538 87.545 -18.959 1.00134.80 ATOM 50 CE1 TYR D 557 -67.019 88.411 -21.541 1.00135.94 ATOM 51 CE2 TYR D 557 -65.784 87.041 -20.005 1.00136.68 ATOM 52 CZ TYR D 557 -66.024 87.476 -21.297 1.00137.37 ATOM 53 OH TYR D 557 -65.266 86.971 -22.338 1.00136.73 ATOM 54 N ALA D 558 -69.821 88.043 -15.335 1.00138.64 ATOM 55 CA ALA D 558 -70.242 88.362 -13.968 1.00140.28 ATOM 56 C ALA D 558 -69.088 88.208 -12.972 1.00139.37 ATOM 57 O ALA D 558 -68.298 87.259 -13.063 1.00135.90 ATOM 58 CB ALA D 558 -71.412 87.491 -13.554 1.00141.28 ATOM 59 N TRP D 559 -69.005 89.141 -12.022 1.00140.68 ATOM 60 CA TRP D 559 -67.921 89.170 -11.033 1.00137.27 ATOM 61 C TRP D 559 -68.321 88.567 -9.683 1.00142.24 ATOM 62 O TRP D 559 -67.552 87.819 -9.080 1.00142.92 ATOM 63 CB TRP D 559 -67.412 90.602 -10.831 1.00135.18 ATOM 64 CG TRP D 559 -66.416 91.051 -11.854 1.00134.83 ATOM 65 CD1 TRP D 559 -65.110 91.388 -11.633 1.00134.31 ATOM 66 CD2 TRP D 559 -66.638 91.207 -13.262 1.00135.15 ATOM 67 NE1 TRP D 559 -64.508 91.747 -12.815 1.00132.97 ATOM 68 CE2 TRP D 559 -65.423 91.643 -13.830 1.00133.93 ATOM 69 CE3 TRP D 559 -67.745 91.021 -14.098 1.00133.88 ATOM 70 CZ2 TRP D 559 -65.286 91.895 -15.200 1.00132.60 ATOM 71 CZ3 TRP D 559 -67.605 91.272 -15.458 1.00129.84 ATOM 72 CH2 TRP D 559 -66.386 91.703 -15.993 1.00130.37 ATOM 73 N THR D 560 -69.516 88.906 -9.206 1.00145.56 ATOM 74 CA THR D 560 -70.001 88.400 -7.927 1.00147.57 ATOM 75 C THR D 560 -71.028 87.293 -8.154 1.00150.23 ATOM 76 O THR D 560 -71.848 87.384 -9.066 1.00151.40 ATOM 77 CB THR D 560 -70.637 89.527 -7.082 1.00151.71 ATOM 78 N ASP D 561 -70.979 86.247 -7.331 1.00151.06 ATOM 79 CA ASP D 561 -71.958 85.166 -7.420 1.00151.89 ATOM 80 C ASP D 561 -73.374 85.739 -7.514 1.00154.87 ATOM 81 O ASP D 561 -74.304 85.066 -7.970 1.00155.81 ATOM 82 CB ASP D 561 -71.835 84.218 -6.223 1.00152.14 ATOM 83 N GLY D 562 -73.523 86.991 -7.083 1.00154.60 ATOM 84 CA GLY D 562 -74.783 87.705 -7.198 1.00156.39 ATOM 85 C GLY D 562 -74.961 88.324 -8.573 1.00153.01 ATOM 86 O GLY D 562 -76.047 88.266 -9.161 1.00149.42 ATOM 87 N GLU D 563 -73.889 88.923 -9.084 1.00154.95 ATOM 88 CA GLU D 563 -73.882 89.451 -10.444 1.00158.20 ATOM 89 C GLU D 563 -74.068 88.309 -11.449 1.00162.18 ATOM 90 O GLU D 563 -74.464 88.537 -12.594 1.00164.77 ATOM 91 CB GLU D 563 -72.587 90.227 -10.727 1.00152.00 ATOM 92 N LEU D 564 -73.789 87.080 -11.010 1.00161.61 ATOM 93 CA LEU D 564 -73.986 85.892 -11.844 1.00157.74 ATOM 94 C LEU D 564 -75.463 85.537 -11.954 1.00165.33 ATOM 95 O LEU D 564 -76.047 85.638 -13.033 1.00167.94 ATOM 96 CB LEU D 564 -73.207 84.692 -11.296 1.00150.51 ATOM 97 N GLU D 565 -76.060 85.139 -10.830 1.00169.45 ATOM 98 CA GLU D 565 -77.453 84.673 -10.791 1.00172.91 ATOM 99 C GLU D 565 -78.454 85.594 -11.500 1.00176.08 ATOM 100 O GLU D 565 -79.586 85.193 -11.771 1.00179.88 ATOM 101 CB GLU D 565 -77.903 84.424 -9.346 1.00174.11 ATOM 102 N GLU D 566 -78.036 86.823 -11.796 1.00174.79 ATOM 103 CA GLU D 566 -78.883 87.763 -12.526 1.00176.59 ATOM 104 C GLU D 566 -78.759 87.581 -14.042 1.00175.70 ATOM 105 O GLU D 566 -79.673 87.941 -14.791 1.00178.08 ATOM 106 CB GLU D 566 -78.553 89.207 -12.136 1.00175.53 ATOM 107 N LEU D 567 -77.628 87.021 -14.482 1.00171.74 ATOM 108 CA LEU D 567 -77.366 86.778 -15.908 1.00166.49 ATOM 109 C LEU D 567 -78.175 85.590 -16.466 1.00170.99 ATOM 110 O LEU D 567 -78.647 85.635 -17.607 1.00173.28 ATOM 111 CB LEU D 567 -75.858 86.596 -16.170 1.00151.87 ATOM 112 N ARG D 568 -78.342 84.547 -15.647 1.00168.76 ATOM 113 CA ARG D 568 -79.104 83.347 -16.020 1.00164.88 ATOM 114 C ARG D 568 -80.568 83.652 -16.383 1.00168.02 ATOM 115 O ARG D 568 -81.278 82.805 -16.934 1.00168.22 ATOM 116 CB ARG D 568 -79.033 82.297 -14.904 1.00159.82 ATOM 117 N LYS D 569 -81.010 84.865 -16.065 1.00169.12 ATOM 118 CA LYS D 569 -82.324 85.338 -16.473 1.00174.22 ATOM 119 C LYS D 569 -82.219 86.031 -17.828 1.00177.55 ATOM 120 O LYS D 569 -83.018 85.773 -18.730 1.00180.51 ATOM 121 CB LYS D 569 -82.889 86.304 -15.431 1.00175.35 ATOM 122 N GLN D 570 -81.216 86.901 -17.963 1.00176.22 ATOM 123 CA GLN D 570 -81.012 87.700 -19.176 1.00175.18 ATOM 124 C GLN D 570 -80.847 86.841 -20.431 1.00174.45 ATOM 125 O GLN D 570 -80.788 87.360 -21.549 1.00174.04 ATOM 126 CB GLN D 570 -79.803 88.633 -19.013 1.00167.94 ATOM 127 N LEU D 577 -72.468 78.464 -18.074 1.00132.76 ATOM 128 CA LEU D 577 -71.494 79.075 -17.161 1.00129.14 ATOM 129 C LEU D 577 -70.075 78.510 -17.305 1.00134.89 ATOM 130 O LEU D 577 -69.808 77.374 -16.909 1.00139.00 ATOM 131 CB LEU D 577 -71.948 78.950 -15.698 1.00119.67 ATOM 132 N GLN D 578 -69.173 79.305 -17.876 1.00134.21 ATOM 133 CA GLN D 578 -67.748 78.996 -17.833 1.00132.39 ATOM 134 C GLN D 578 -67.170 79.631 -16.568 1.00129.75 ATOM 135 O GLN D 578 -67.133 80.856 -16.445 1.00132.40 ATOM 136 CB GLN D 578 -67.027 79.521 -19.079 1.00131.80 ATOM 137 N ARG D 579 -66.744 78.795 -15.623 1.00124.53 ATOM 138 CA ARG D 579 -66.236 79.267 -14.332 1.00118.93 ATOM 139 C ARG D 579 -64.712 79.474 -14.345 1.00118.10 ATOM 140 O ARG D 579 -63.953 78.571 -13.986 1.00122.97 ATOM 141 CB ARG D 579 -66.646 78.295 -13.208 1.00116.16 ATOM 142 N TYR D 580 -64.270 80.666 -14.746 1.00113.70 ATOM 143 CA TYR D 580 -62.841 80.946 -14.893 1.00117.85 ATOM 144 C TYR D 580 -62.015 80.525 -13.678 1.00117.67 ATOM 145 O TYR D 580 -62.128 81.112 -12.598 1.00113.33 ATOM 146 CB TYR D 580 -62.596 82.415 -15.260 1.00125.35 ATOM 147 CG TYR D 580 -63.101 82.752 -16.647 1.00137.36 ATOM 148 CD1 TYR D 580 -62.487 82.227 -17.780 1.00139.81 ATOM 149 CD2 TYR D 580 -64.206 83.578 -16.825 1.00143.17 ATOM 150 CE1 TYR D 580 -62.957 82.522 -19.053 1.00143.43 ATOM 151 CE2 TYR D 580 -64.680 83.880 -18.094 1.00145.62 ATOM 152 CZ TYR D 580 -64.053 83.351 -19.202 1.00147.99 ATOM 153 OH TYR D 580 -64.530 83.653 -20.458 1.00155.02 ATOM 154 N LYS D 581 -61.187 79.497 -13.876 1.00119.85 ATOM 155 CA LYS D 581 -60.343 78.938 -12.816 1.00115.67 ATOM 156 C LYS D 581 -58.977 79.654 -12.720 1.00116.13 ATOM 157 O LYS D 581 -58.186 79.411 -11.792 1.00111.57 ATOM 158 CB LYS D 581 -60.170 77.426 -13.023 1.00112.68 ATOM 159 N GLY D 582 -58.716 80.540 -13.682 1.00109.99 ATOM 160 CA GLY D 582 -57.502 81.337 -13.699 1.00112.07 ATOM 161 C GLY D 582 -57.408 82.197 -14.944 1.00117.09 ATOM 162 O GLY D 582 -58.277 82.129 -15.813 1.00123.51 TER