HEADER CYTOKINE/IMMUNE SYSTEM 31-DEC-69 4MXW TITLE Structure of heterotrimeric lymphotoxin LTa1b2 bound to lymphotoxin TITLE 2 beta receptor LTbR and anti-LTa Fab COMPND MOL_ID: 1; COMPND 2 MOLECULE: Tumor necrosis factor receptor superfamily member 3; COMPND 3 CHAIN: S, R; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.60 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET R 90 REMARK 465 GLY R 91 REMARK 465 LEU R 92 REMARK 465 GLU R 93 REMARK 465 GLN R 109 REMARK 465 PRO R 110 REMARK 465 GLY R 111 REMARK 465 MET R 112 REMARK 465 PHE R 113 REMARK 465 ALA R 115 REMARK 465 ALA R 116 REMARK 465 TRP R 117 REMARK 465 ALA R 118 REMARK 465 LEU R 119 REMARK 465 GLU R 120 DBREF 4MXW R 41 211 UNP P36941 TNR3_HUMAN 41 211 SEQRES 1 R 44 CYS ARG PRO CYS ASP PRO VAL MET GLY LEU GLU GLU ILE SEQRES 2 R 44 ALA PRO CYS THR SER LYS ARG LYS THR GLN CYS ARG CYS SEQRES 3 R 44 GLN PRO GLY MET PHE CYS ALA ALA TRP ALA LEU GLU CYS SEQRES 4 R 44 THR HIS CYS GLU LEU ATOM 1 N CYS R 101 -34.282 -33.743-240.018 1.00 93.53 ATOM 2 CA CYS R 101 -35.678 -33.376-239.853 1.00 93.40 ATOM 3 C CYS R 101 -36.051 -33.183-238.391 1.00 91.98 ATOM 4 O CYS R 101 -35.923 -34.122-237.601 1.00 89.90 ATOM 5 CB CYS R 101 -36.575 -34.457-240.461 1.00 98.38 ATOM 6 SG CYS R 101 -36.493 -34.605-242.256 1.00 94.18 ATOM 7 N ARG R 102 -36.547 -31.992-238.044 1.00108.58 ATOM 8 CA ARG R 102 -36.977 -31.707-236.674 1.00115.78 ATOM 9 C ARG R 102 -38.468 -31.441-236.531 1.00116.62 ATOM 10 O ARG R 102 -39.023 -30.632-237.275 1.00116.55 ATOM 11 CB ARG R 102 -36.213 -30.503-236.115 1.00118.00 ATOM 12 CG ARG R 102 -34.733 -30.758-235.914 1.00108.46 ATOM 13 CD ARG R 102 -34.017 -29.569-235.298 1.00107.27 ATOM 14 NE ARG R 102 -32.582 -29.811-235.289 1.00106.65 ATOM 15 CZ ARG R 102 -31.761 -29.430-236.256 1.00110.23 ATOM 16 NH1 ARG R 102 -32.233 -28.761-237.301 1.00115.85 ATOM 17 NH2 ARG R 102 -30.471 -29.710-236.171 1.00114.29 ATOM 18 N PRO R 103 -39.104 -32.097-235.534 1.00123.47 ATOM 19 CA PRO R 103 -40.503 -31.868-235.162 1.00130.64 ATOM 20 C PRO R 103 -40.818 -30.398-234.923 1.00141.93 ATOM 21 O PRO R 103 -39.918 -29.555-234.847 1.00142.81 ATOM 22 CB PRO R 103 -40.660 -32.656-233.851 1.00123.90 ATOM 23 CG PRO R 103 -39.627 -33.672-233.879 1.00117.52 ATOM 24 CD PRO R 103 -38.470 -33.089-234.645 1.00123.92 ATOM 25 N CYS R 104 -42.103 -30.103-234.786 1.00179.84 ATOM 26 CA CYS R 104 -42.541 -28.748-234.518 1.00184.85 ATOM 27 C CYS R 104 -42.398 -28.402-233.046 1.00183.50 ATOM 28 O CYS R 104 -43.171 -28.853-232.212 1.00179.43 ATOM 29 CB CYS R 104 -43.981 -28.564-234.982 1.00191.07 ATOM 30 SG CYS R 104 -44.177 -28.823-236.729 1.00232.13 ATOM 31 N ASP R 105 -41.383 -27.598-232.756 1.00169.42 ATOM 32 CA ASP R 105 -41.118 -27.100-231.420 1.00163.25 ATOM 33 C ASP R 105 -42.201 -26.115-231.001 1.00155.00 ATOM 34 O ASP R 105 -42.308 -25.036-231.579 1.00155.39 ATOM 35 CB ASP R 105 -39.739 -26.433-231.381 1.00165.61 ATOM 36 CG ASP R 105 -39.146 -26.402-229.999 1.00159.38 ATOM 37 OD1 ASP R 105 -37.923 -26.610-229.893 1.00155.16 ATOM 38 OD2 ASP R 105 -39.897 -26.168-229.029 1.00157.44 ATOM 39 N PRO R 106 -43.024 -26.492-230.007 1.00112.12 ATOM 40 CA PRO R 106 -44.014 -25.570-229.428 1.00106.44 ATOM 41 C PRO R 106 -43.415 -24.212-229.033 1.00108.24 ATOM 42 O PRO R 106 -43.179 -23.931-227.846 1.00 96.07 ATOM 43 CB PRO R 106 -44.513 -26.330-228.195 1.00 97.94 ATOM 44 CG PRO R 106 -44.358 -27.776-228.572 1.00 92.78 ATOM 45 CD PRO R 106 -43.111 -27.843-229.411 1.00106.13 ATOM 46 N VAL R 107 -43.152 -23.392-230.046 1.00133.52 ATOM 47 CA VAL R 107 -42.720 -22.015-229.853 1.00142.29 ATOM 48 C VAL R 107 -43.905 -21.116-230.216 1.00139.53 ATOM 49 O VAL R 107 -44.888 -21.601-230.783 1.00133.92 ATOM 50 CB VAL R 107 -41.460 -21.669-230.714 1.00143.24 ATOM 51 CG1 VAL R 107 -41.058 -20.211-230.550 1.00151.52 ATOM 52 CG2 VAL R 107 -40.288 -22.571-230.349 1.00133.56 ATOM 53 N GLU R 112 -48.363 -25.934-236.331 1.00116.45 ATOM 54 CA GLU R 112 -47.390 -27.028-236.466 1.00113.85 ATOM 55 C GLU R 112 -47.416 -27.551-237.913 1.00119.28 ATOM 56 O GLU R 112 -47.199 -26.783-238.881 1.00121.83 ATOM 57 CB GLU R 112 -47.675 -28.227-235.559 1.00116.56 ATOM 58 CG GLU R 112 -48.022 -28.019-233.984 1.00123.85 ATOM 59 CD GLU R 112 -47.975 -29.531-233.295 1.00136.32 ATOM 60 OE1 GLU R 112 -48.806 -30.490-233.797 1.00142.34 ATOM 61 OE2 GLU R 112 -47.052 -29.801-232.360 1.00142.76 ATOM 62 N ILE R 113 -47.596 -28.885-237.996 1.00146.97 ATOM 63 CA ILE R 113 -47.865 -29.794-239.150 1.00154.66 ATOM 64 C ILE R 113 -46.550 -30.502-239.569 1.00155.19 ATOM 65 O ILE R 113 -45.561 -30.627-238.817 1.00151.85 ATOM 66 CB ILE R 113 -48.611 -29.147-240.439 1.00149.88 ATOM 67 CG1 ILE R 113 -47.693 -28.335-241.383 1.00144.39 ATOM 68 CG2 ILE R 113 -49.914 -28.413-240.021 1.00144.58 ATOM 69 CD1 ILE R 113 -48.031 -28.449-242.845 1.00135.69 ATOM 70 N ALA R 114 -46.606 -30.999-240.790 1.00148.44 ATOM 71 CA ALA R 114 -45.754 -32.008-241.349 1.00144.17 ATOM 72 C ALA R 114 -45.648 -31.740-242.857 1.00137.21 ATOM 73 O ALA R 114 -46.013 -30.674-243.299 1.00133.50 ATOM 74 CB ALA R 114 -46.370 -33.393-241.025 1.00142.23 ATOM 75 N PRO R 115 -45.094 -32.663-243.654 1.00133.97 ATOM 76 CA PRO R 115 -44.418 -33.957-243.504 1.00137.11 ATOM 77 C PRO R 115 -43.006 -33.776-242.991 1.00149.15 ATOM 78 O PRO R 115 -42.836 -33.492-241.804 1.00154.43 ATOM 79 CB PRO R 115 -44.450 -34.538-244.924 1.00133.81 ATOM 80 CG PRO R 115 -44.471 -33.337-245.800 1.00134.94 ATOM 81 CD PRO R 115 -45.118 -32.218-245.057 1.00128.03 ATOM 82 N CYS R 116 -42.065 -33.856-243.925 1.00167.81 ATOM 83 CA CYS R 116 -40.622 -33.982-243.756 1.00167.32 ATOM 84 C CYS R 116 -40.234 -35.252-244.445 1.00161.51 ATOM 85 O CYS R 116 -40.358 -36.342-243.884 1.00155.54 ATOM 86 CB CYS R 116 -40.145 -34.014-242.305 1.00168.03 ATOM 87 SG CYS R 116 -38.519 -34.721-242.154 1.00178.07 ATOM 88 N THR R 117 -39.803 -35.092-245.687 1.00143.47 ATOM 89 CA THR R 117 -39.283 -36.198-246.465 1.00143.29 ATOM 90 C THR R 117 -37.969 -35.773-247.083 1.00138.07 ATOM 91 O THR R 117 -37.584 -34.615-246.997 1.00135.90 ATOM 92 CB THR R 117 -40.184 -36.624-247.576 1.00143.21 ATOM 93 OG1 THR R 117 -40.554 -35.475-248.333 1.00147.57 ATOM 94 CG2 THR R 117 -41.426 -37.228-247.004 1.00146.43 ATOM 95 N SER R 118 -37.323 -36.686-247.796 1.00121.17 ATOM 96 CA SER R 118 -35.910 -36.539-248.125 1.00112.66 ATOM 97 C SER R 118 -35.580 -35.326-248.980 1.00111.69 ATOM 98 O SER R 118 -34.411 -35.078-249.244 1.00113.69 ATOM 99 CB SER R 118 -35.409 -37.783-248.856 1.00104.25 ATOM 100 OG SER R 118 -36.252 -38.076-249.969 1.00110.66 ATOM 101 N LYS R 119 -36.567 -34.602-249.480 1.00114.94 ATOM 102 CA LYS R 119 -36.174 -33.507-250.334 1.00116.97 ATOM 103 C LYS R 119 -36.680 -32.183-249.758 1.00125.87 ATOM 104 O LYS R 119 -36.232 -31.131-250.192 1.00126.63 ATOM 105 CB LYS R 119 -36.652 -33.738-251.794 1.00120.67 ATOM 106 CG LYS R 119 -38.184 -34.025-251.942 1.00134.54 ATOM 107 CD LYS R 119 -38.566 -33.770-253.419 1.00129.27 ATOM 108 CE LYS R 119 -40.023 -34.154-253.667 1.00121.84 ATOM 109 NZ LYS R 119 -40.594 -33.923-255.035 1.00120.07 ATOM 110 N ARG R 120 -37.597 -32.234-248.798 1.00143.18 ATOM 111 CA ARG R 120 -38.179 -31.041-248.254 1.00158.80 ATOM 112 C ARG R 120 -38.192 -31.218-246.741 1.00152.34 ATOM 113 O ARG R 120 -38.372 -32.325-246.174 1.00157.69 ATOM 114 CB ARG R 120 -39.582 -30.808-248.815 1.00175.91 ATOM 115 CG ARG R 120 -39.489 -30.232-250.264 1.00184.38 ATOM 116 CD ARG R 120 -40.812 -30.103-250.948 1.00192.39 ATOM 117 NE ARG R 120 -40.704 -29.918-252.406 1.00202.41 ATOM 118 CZ ARG R 120 -41.739 -29.839-253.248 1.00209.36 ATOM 119 NH1 ARG R 120 -42.976 -29.926-252.788 1.00215.57 ATOM 120 NH2 ARG R 120 -41.539 -29.671-254.554 1.00207.48 ATOM 121 N LYS R 121 -38.105 -30.074-246.083 1.00154.53 ATOM 122 CA LYS R 121 -37.913 -29.986-244.641 1.00150.87 ATOM 123 C LYS R 121 -39.246 -29.805-243.976 1.00158.61 ATOM 124 O LYS R 121 -40.174 -29.316-244.601 1.00165.45 ATOM 125 CB LYS R 121 -36.922 -28.847-244.298 1.00146.46 ATOM 126 CG LYS R 121 -37.327 -27.439-244.635 1.00149.42 ATOM 127 CD LYS R 121 -36.275 -26.425-244.224 1.00153.73 ATOM 128 CE LYS R 121 -36.634 -24.968-244.544 1.00163.37 ATOM 129 NZ LYS R 121 -35.556 -24.000-244.114 1.00155.51 ATOM 130 N THR R 122 -39.334 -30.283-242.737 1.00148.79 ATOM 131 CA THR R 122 -40.441 -29.954-241.861 1.00147.95 ATOM 132 C THR R 122 -41.024 -28.606-242.257 1.00158.16 ATOM 133 O THR R 122 -40.493 -27.572-241.829 1.00161.36 ATOM 134 CB THR R 122 -40.020 -29.829-240.395 1.00148.74 ATOM 135 OG1 THR R 122 -39.330 -31.006-239.980 1.00147.12 ATOM 136 CG2 THR R 122 -41.240 -29.609-239.539 1.00150.69 ATOM 137 N GLN R 123 -42.037 -28.571-243.125 1.00152.35 ATOM 138 CA GLN R 123 -42.685 -27.296-243.375 1.00150.24 ATOM 139 C GLN R 123 -43.675 -27.236-242.228 1.00144.75 ATOM 140 O GLN R 123 -44.746 -27.818-242.207 1.00140.28 ATOM 141 CB GLN R 123 -43.283 -27.178-244.770 1.00153.55 ATOM 142 CG GLN R 123 -42.286 -26.381-245.641 1.00156.77 ATOM 143 CD GLN R 123 -42.326 -26.630-247.155 1.00163.21 ATOM 144 OE1 GLN R 123 -42.908 -27.608-247.634 1.00161.46 ATOM 145 NE2 GLN R 123 -41.687 -25.725-247.917 1.00163.41 ATOM 146 N CYS R 124 -43.168 -26.624-241.187 1.00129.35 ATOM 147 CA CYS R 124 -43.898 -26.061-240.098 1.00122.46 ATOM 148 C CYS R 124 -44.312 -24.643-240.370 1.00116.42 ATOM 149 O CYS R 124 -43.508 -23.805-240.741 1.00111.15 ATOM 150 CB CYS R 124 -42.997 -26.113-238.870 1.00120.54 ATOM 151 SG CYS R 124 -43.160 -27.391-237.732 1.00128.76 ATOM 152 N ARG R 125 -45.559 -24.366-240.056 1.00141.87 ATOM 153 CA ARG R 125 -46.070 -23.063-240.396 1.00138.79 ATOM 154 C ARG R 125 -46.902 -22.425-239.290 1.00141.52 ATOM 155 O ARG R 125 -47.732 -23.093-238.672 1.00136.70 ATOM 156 CB ARG R 125 -46.856 -23.169-241.724 1.00146.88 ATOM 157 CG ARG R 125 -46.054 -23.494-242.990 1.00154.74 ATOM 158 CD ARG R 125 -46.887 -23.539-244.295 1.00165.83 ATOM 159 NE ARG R 125 -46.077 -23.923-245.461 1.00179.44 ATOM 160 CZ ARG R 125 -46.573 -24.147-246.678 1.00174.92 ATOM 161 NH1 ARG R 125 -47.875 -24.019-246.895 1.00171.25 ATOM 162 NH2 ARG R 125 -45.774 -24.495-247.683 1.00170.47 ATOM 163 N CYS R 126 -46.668 -21.126-239.060 1.00138.50 ATOM 164 CA CYS R 126 -47.275 -20.389-237.946 1.00144.52 ATOM 165 C CYS R 126 -46.815 -18.932-237.892 1.00154.23 ATOM 166 O CYS R 126 -47.406 -18.098-237.220 1.00164.82 ATOM 167 CB CYS R 126 -46.943 -21.075-236.620 1.00148.88 ATOM 168 SG CYS R 126 -48.054 -20.621-235.287 1.00175.41 ATOM 169 N CYS R 132 -54.053 -18.287-232.868 1.00125.35 ATOM 170 CA CYS R 132 -54.201 -18.510-234.303 1.00126.73 ATOM 171 C CYS R 132 -53.362 -19.694-234.772 1.00129.37 ATOM 172 O CYS R 132 -53.500 -20.146-235.907 1.00119.39 ATOM 173 CB CYS R 132 -53.823 -17.242-235.083 1.00139.66 ATOM 174 SG CYS R 132 -52.350 -16.372-234.451 1.00162.32 ATOM 175 N CYS R 139 -43.237 -18.871-232.349 1.00144.04 ATOM 176 CA CYS R 139 -43.951 -18.706-233.607 1.00158.17 ATOM 177 C CYS R 139 -43.750 -17.290-234.132 1.00171.07 ATOM 178 O CYS R 139 -43.922 -16.327-233.388 1.00165.89 ATOM 179 CB CYS R 139 -45.439 -18.998-233.429 1.00162.92 ATOM 180 SG CYS R 139 -46.213 -19.850-234.834 1.00175.21 ATOM 181 N THR R 140 -43.367 -17.188-235.408 1.00201.41 ATOM 182 CA THR R 140 -43.062 -15.923-236.090 1.00210.04 ATOM 183 C THR R 140 -44.027 -14.819-235.709 1.00207.64 ATOM 184 O THR R 140 -43.794 -14.084-234.752 1.00211.87 ATOM 185 CB THR R 140 -43.110 -16.086-237.614 1.00212.89 ATOM 186 OG1 THR R 140 -44.420 -16.527-237.994 1.00210.13 ATOM 187 CG2 THR R 140 -42.074 -17.094-238.092 1.00220.89 ATOM 188 N HIS R 141 -45.098 -14.683-236.479 1.00186.22 ATOM 189 CA HIS R 141 -46.260 -13.989-235.963 1.00179.48 ATOM 190 C HIS R 141 -47.508 -14.784-236.263 1.00172.54 ATOM 191 O HIS R 141 -47.592 -15.454-237.288 1.00171.65 ATOM 192 CB HIS R 141 -46.389 -12.573-236.507 1.00180.06 ATOM 193 CG HIS R 141 -47.113 -11.658-235.569 1.00177.72 ATOM 194 ND1 HIS R 141 -46.540 -11.197-234.402 1.00177.05 ATOM 195 CD2 HIS R 141 -48.376 -11.172-235.585 1.00177.78 ATOM 196 CE1 HIS R 141 -47.409 -10.437-233.758 1.00176.02 ATOM 197 NE2 HIS R 141 -48.531 -10.407-234.455 1.00178.81 ATOM 198 N CYS R 142 -48.470 -14.606-235.358 1.00173.43 ATOM 199 CA CYS R 142 -49.599 -15.485-235.035 1.00169.34 ATOM 200 C CYS R 142 -49.272 -15.997-233.650 1.00172.97 ATOM 201 O CYS R 142 -48.175 -15.747-233.158 1.00180.25 ATOM 202 CB CYS R 142 -49.800 -16.641-236.012 1.00171.25 ATOM 203 SG CYS R 142 -51.470 -17.272-236.083 1.00199.24 ATOM 204 N GLU R 143 -50.220 -16.690-233.023 1.00170.49 ATOM 205 CA GLU R 143 -50.051 -17.241-231.668 1.00174.91 ATOM 206 C GLU R 143 -49.731 -16.148-230.610 1.00179.02 ATOM 207 O GLU R 143 -50.543 -15.904-229.701 1.00175.54 ATOM 208 CB GLU R 143 -48.967 -18.335-231.673 1.00165.93 ATOM 209 CG GLU R 143 -49.079 -19.367-230.559 1.00156.77 ATOM 210 CD GLU R 143 -48.270 -18.988-229.346 1.00161.25 ATOM 211 OE1 GLU R 143 -47.464 -18.039-229.456 1.00167.23 ATOM 212 OE2 GLU R 143 -48.436 -19.635-228.288 1.00161.17 ATOM 213 N LEU R 144 -48.580 -15.474-230.749 1.00184.74 ATOM 214 CA LEU R 144 -48.163 -14.373-229.857 1.00180.77 ATOM 215 C LEU R 144 -49.157 -13.202-229.834 1.00180.80 ATOM 216 O LEU R 144 -48.935 -12.205-229.138 1.00179.74 ATOM 217 CB LEU R 144 -46.776 -13.838-230.266 1.00176.05 ATOM 218 CG LEU R 144 -45.480 -14.658-230.161 1.00165.97 ATOM 219 CD1 LEU R 144 -44.539 -14.220-231.258 1.00162.92 ATOM 220 CD2 LEU R 144 -44.799 -14.497-228.808 1.00159.43 TER