HEADER Apoptosis/Immune System 18-OCT-13 4N90 TITLE Crystal structure of ternary complex of TRAIL, DR5, and Fab fragment TITLE 2 from a DR5 agonist antibody COMPND MOL_ID: 1; COMPND 2 MOLECULE: Tumor necrosis factor receptor superfamily member 10B; COMPND 3 CHAIN: R, S, T; COMPND 4 FRAGMENT: UNP residues ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.30 ANGSTORMS DBREF 4N90 R 4 129 UNP O14763 TR10B_HUMAN 57 182 SEQRES 1 R 27 LYS CYS ARG THR GLY CYS PRO ARG GLY MET VAL LYS VAL SEQRES 2 R 27 GLY ASP CYS THR PRO TRP SER ASP ILE GLU CYS VAL HIS SEQRES 3 R 27 LYS ATOM 1 N LYS R 102 47.138 -38.103 33.543 1.00 76.36 ATOM 2 CA LYS R 102 46.557 -38.048 34.887 1.00 78.50 ATOM 3 C LYS R 102 46.525 -36.623 35.426 1.00 81.41 ATOM 4 O LYS R 102 47.519 -35.889 35.350 1.00 79.70 ATOM 5 CB LYS R 102 47.344 -38.929 35.871 1.00 79.11 ATOM 6 CG LYS R 102 47.121 -40.428 35.732 1.00 78.90 ATOM 7 CD LYS R 102 48.286 -41.221 36.322 1.00 79.62 ATOM 8 CE LYS R 102 48.327 -42.640 35.755 1.00 83.20 ATOM 9 NZ LYS R 102 49.557 -43.424 36.087 1.00 79.02 ATOM 10 N CYS R 103 45.366 -36.242 35.954 1.00 85.13 ATOM 11 CA CYS R 103 45.240 -35.066 36.795 1.00 85.44 ATOM 12 C CYS R 103 45.883 -35.435 38.125 1.00 85.92 ATOM 13 O CYS R 103 45.739 -36.569 38.579 1.00 87.83 ATOM 14 CB CYS R 103 43.757 -34.730 36.991 1.00 90.47 ATOM 15 SG CYS R 103 42.822 -34.511 35.450 1.00 98.59 ATOM 16 N ARG R 104 46.619 -34.514 38.741 1.00 90.32 ATOM 17 CA ARG R 104 47.101 -34.764 40.110 1.00100.71 ATOM 18 C ARG R 104 46.000 -34.320 41.070 1.00112.94 ATOM 19 O ARG R 104 45.237 -33.396 40.761 1.00120.64 ATOM 20 CB ARG R 104 48.419 -34.045 40.429 1.00 92.02 ATOM 21 CG ARG R 104 49.217 -33.602 39.219 1.00 88.93 ATOM 22 CD ARG R 104 48.821 -32.196 38.806 1.00 83.57 ATOM 23 NE ARG R 104 49.619 -31.191 39.497 1.00 85.15 ATOM 24 CZ ARG R 104 49.410 -29.878 39.430 1.00 90.63 ATOM 25 NH1 ARG R 104 48.408 -29.388 38.709 1.00 88.97 ATOM 26 NH2 ARG R 104 50.207 -29.048 40.096 1.00 96.23 ATOM 27 N THR R 105 45.902 -34.981 42.221 1.00117.11 ATOM 28 CA THR R 105 44.792 -34.725 43.142 1.00123.76 ATOM 29 C THR R 105 45.071 -33.613 44.159 1.00130.12 ATOM 30 O THR R 105 44.303 -32.652 44.250 1.00143.09 ATOM 31 CB THR R 105 44.281 -36.014 43.823 1.00123.44 ATOM 32 OG1 THR R 105 45.316 -37.007 43.811 1.00122.89 ATOM 33 CG2 THR R 105 43.064 -36.560 43.076 1.00121.67 ATOM 34 N GLY R 106 46.159 -33.728 44.913 1.00129.37 ATOM 35 CA GLY R 106 46.548 -32.654 45.821 1.00136.08 ATOM 36 C GLY R 106 47.149 -31.479 45.066 1.00143.22 ATOM 37 O GLY R 106 47.553 -31.617 43.904 1.00138.88 ATOM 38 N CYS R 107 47.179 -30.315 45.711 1.00146.14 ATOM 39 CA CYS R 107 47.990 -29.199 45.230 1.00150.99 ATOM 40 C CYS R 107 49.339 -29.220 45.966 1.00156.44 ATOM 41 O CYS R 107 49.439 -29.807 47.051 1.00150.87 ATOM 42 CB CYS R 107 47.273 -27.857 45.429 1.00148.46 ATOM 43 SG CYS R 107 46.152 -27.357 44.094 1.00146.17 ATOM 44 N PRO R 108 50.385 -28.603 45.374 1.00161.95 ATOM 45 CA PRO R 108 51.692 -28.531 46.041 1.00164.79 ATOM 46 C PRO R 108 51.640 -27.740 47.345 1.00171.78 ATOM 47 O PRO R 108 50.723 -26.938 47.552 1.00184.78 ATOM 48 CB PRO R 108 52.568 -27.790 45.024 1.00163.08 ATOM 49 CG PRO R 108 51.904 -28.016 43.711 1.00163.94 ATOM 50 CD PRO R 108 50.437 -28.034 44.014 1.00160.52 ATOM 51 N ARG R 109 52.622 -27.973 48.213 1.00168.43 ATOM 52 CA ARG R 109 52.746 -27.244 49.472 1.00165.39 ATOM 53 C ARG R 109 52.937 -25.738 49.211 1.00168.33 ATOM 54 O ARG R 109 53.948 -25.315 48.639 1.00166.24 ATOM 55 CB ARG R 109 53.903 -27.821 50.297 1.00155.27 ATOM 56 CG ARG R 109 54.057 -27.218 51.683 1.00153.97 ATOM 57 CD ARG R 109 55.489 -27.355 52.175 1.00151.51 ATOM 58 NE ARG R 109 55.800 -26.403 53.244 1.00154.24 ATOM 59 CZ ARG R 109 56.249 -25.159 53.049 1.00152.53 ATOM 60 NH1 ARG R 109 56.442 -24.690 51.816 1.00152.88 ATOM 61 NH2 ARG R 109 56.504 -24.374 54.091 1.00148.53 ATOM 62 N GLY R 110 51.945 -24.944 49.612 1.00168.99 ATOM 63 CA GLY R 110 51.988 -23.487 49.443 1.00164.51 ATOM 64 C GLY R 110 51.074 -22.937 48.360 1.00160.10 ATOM 65 O GLY R 110 51.198 -21.771 47.967 1.00148.02 ATOM 66 N MET R 111 50.150 -23.775 47.888 1.00161.46 ATOM 67 CA MET R 111 49.226 -23.407 46.813 1.00157.01 ATOM 68 C MET R 111 47.787 -23.832 47.099 1.00148.13 ATOM 69 O MET R 111 47.546 -24.841 47.771 1.00138.90 ATOM 70 CB MET R 111 49.691 -23.999 45.479 1.00161.99 ATOM 71 CG MET R 111 50.761 -23.186 44.765 1.00168.42 ATOM 72 SD MET R 111 51.113 -23.832 43.118 1.00176.10 ATOM 73 CE MET R 111 51.742 -22.379 42.280 1.00170.43 ATOM 74 N VAL R 112 46.841 -23.050 46.578 1.00146.97 ATOM 75 CA VAL R 112 45.409 -23.316 46.751 1.00150.58 ATOM 76 C VAL R 112 44.768 -23.765 45.432 1.00146.22 ATOM 77 O VAL R 112 44.998 -23.154 44.381 1.00142.10 ATOM 78 CB VAL R 112 44.662 -22.100 47.371 1.00154.50 ATOM 79 CG1 VAL R 112 44.560 -20.935 46.386 1.00151.21 ATOM 80 CG2 VAL R 112 43.287 -22.505 47.893 1.00148.95 ATOM 81 N LYS R 113 43.972 -24.835 45.508 1.00137.58 ATOM 82 CA LYS R 113 43.363 -25.462 44.334 1.00128.64 ATOM 83 C LYS R 113 42.305 -24.568 43.680 1.00128.15 ATOM 84 O LYS R 113 41.125 -24.633 44.025 1.00130.25 ATOM 85 CB LYS R 113 42.774 -26.834 44.699 1.00119.66 ATOM 86 CG LYS R 113 42.703 -27.798 43.525 1.00112.93 ATOM 87 CD LYS R 113 41.484 -28.696 43.614 1.00107.78 ATOM 88 CE LYS R 113 40.991 -29.061 42.225 1.00104.43 ATOM 89 NZ LYS R 113 39.582 -29.542 42.207 1.00 98.30 ATOM 90 N VAL R 114 42.737 -23.739 42.730 1.00126.91 ATOM 91 CA VAL R 114 41.842 -22.784 42.061 1.00123.10 ATOM 92 C VAL R 114 41.087 -23.376 40.861 1.00123.50 ATOM 93 O VAL R 114 39.909 -23.073 40.662 1.00120.43 ATOM 94 CB VAL R 114 42.554 -21.449 41.682 1.00123.18 ATOM 95 CG1 VAL R 114 42.921 -20.663 42.934 1.00123.79 ATOM 96 CG2 VAL R 114 43.788 -21.675 40.813 1.00121.86 ATOM 97 N GLY R 115 41.760 -24.224 40.082 1.00128.04 ATOM 98 CA GLY R 115 41.186 -24.804 38.861 1.00128.13 ATOM 99 C GLY R 115 40.836 -26.285 38.937 1.00129.20 ATOM 100 O GLY R 115 41.449 -27.045 39.693 1.00136.41 ATOM 101 N ASP R 116 39.854 -26.691 38.134 1.00113.82 ATOM 102 CA ASP R 116 39.356 -28.064 38.141 1.00105.17 ATOM 103 C ASP R 116 39.955 -28.944 37.046 1.00 99.85 ATOM 104 O ASP R 116 40.264 -28.457 35.957 1.00 99.21 ATOM 105 CB ASP R 116 37.833 -28.056 38.013 1.00103.27 ATOM 106 CG ASP R 116 37.142 -28.599 39.244 1.00103.21 ATOM 107 OD1 ASP R 116 37.800 -28.715 40.305 1.00103.84 ATOM 108 OD2 ASP R 116 35.940 -28.924 39.141 1.00 98.06 ATOM 109 N CYS R 117 40.108 -30.238 37.342 1.00 90.44 ATOM 110 CA CYS R 117 40.468 -31.229 36.328 1.00 85.66 ATOM 111 C CYS R 117 39.279 -31.564 35.421 1.00 83.29 ATOM 112 O CYS R 117 38.280 -32.129 35.867 1.00 84.91 ATOM 113 CB CYS R 117 41.032 -32.500 36.977 1.00 90.35 ATOM 114 SG CYS R 117 40.908 -34.028 35.994 1.00105.94 ATOM 115 N THR R 118 39.389 -31.201 34.147 1.00 80.23 ATOM 116 CA THR R 118 38.416 -31.614 33.137 1.00 76.67 ATOM 117 C THR R 118 39.044 -32.636 32.207 1.00 74.32 ATOM 118 O THR R 118 40.194 -33.041 32.413 1.00 71.55 ATOM 119 CB THR R 118 37.954 -30.441 32.251 1.00 76.72 ATOM 120 OG1 THR R 118 39.095 -29.678 31.830 1.00 75.17 ATOM 121 CG2 THR R 118 36.944 -29.563 32.982 1.00 77.64 ATOM 122 N PRO R 119 38.283 -33.072 31.185 1.00 70.57 ATOM 123 CA PRO R 119 38.847 -33.764 30.038 1.00 71.28 ATOM 124 C PRO R 119 39.841 -32.915 29.249 1.00 71.62 ATOM 125 O PRO R 119 40.662 -33.479 28.531 1.00 72.56 ATOM 126 CB PRO R 119 37.621 -34.072 29.172 1.00 67.45 ATOM 127 CG PRO R 119 36.523 -33.240 29.728 1.00 67.96 ATOM 128 CD PRO R 119 36.821 -33.183 31.187 1.00 68.36 ATOM 129 N TRP R 120 39.777 -31.589 29.383 1.00 72.03 ATOM 130 CA TRP R 120 40.684 -30.709 28.647 1.00 73.22 ATOM 131 C TRP R 120 41.674 -29.947 29.467 1.00 69.48 ATOM 132 O TRP R 120 42.449 -29.167 28.916 1.00 65.88 ATOM 133 CB TRP R 120 39.904 -29.735 27.792 1.00 87.31 ATOM 134 CG TRP R 120 39.370 -30.358 26.536 1.00103.10 ATOM 135 CD1 TRP R 120 40.057 -30.600 25.343 1.00105.73 ATOM 136 CD2 TRP R 120 38.005 -30.840 26.303 1.00114.03 ATOM 137 NE1 TRP R 120 39.230 -31.181 24.413 1.00115.40 ATOM 138 CE2 TRP R 120 37.983 -31.356 24.920 1.00118.96 ATOM 139 CE3 TRP R 120 36.838 -30.894 27.067 1.00113.59 ATOM 140 CZ2 TRP R 120 36.832 -31.901 24.354 1.00119.25 ATOM 141 CZ3 TRP R 120 35.687 -31.445 26.485 1.00121.66 ATOM 142 CH2 TRP R 120 35.686 -31.936 25.160 1.00123.76 ATOM 143 N SER R 121 41.668 -30.146 30.782 1.00 70.71 ATOM 144 CA SER R 121 42.595 -29.425 31.653 1.00 71.63 ATOM 145 C SER R 121 42.886 -30.133 32.964 1.00 73.21 ATOM 146 O SER R 121 42.001 -30.729 33.572 1.00 74.42 ATOM 147 CB SER R 121 42.065 -28.021 31.949 1.00 72.49 ATOM 148 OG SER R 121 42.976 -27.285 32.749 1.00 73.48 ATOM 149 N ASP R 122 44.141 -30.051 33.393 1.00 76.71 ATOM 150 CA ASP R 122 44.549 -30.481 34.727 1.00 79.77 ATOM 151 C ASP R 122 44.001 -29.491 35.755 1.00 83.41 ATOM 152 O ASP R 122 43.592 -28.381 35.401 1.00 87.46 ATOM 153 CB ASP R 122 46.080 -30.501 34.809 1.00 78.90 ATOM 154 CG ASP R 122 46.612 -31.231 36.046 1.00 80.39 ATOM 155 OD1 ASP R 122 45.994 -32.205 36.529 1.00 77.54 ATOM 156 OD2 ASP R 122 47.683 -30.830 36.534 1.00 83.02 ATOM 157 N ILE R 123 43.991 -29.898 37.023 1.00 87.46 ATOM 158 CA ILE R 123 43.715 -28.984 38.130 1.00 89.78 ATOM 159 C ILE R 123 44.725 -27.837 38.095 1.00102.19 ATOM 160 O ILE R 123 45.916 -28.054 37.839 1.00105.94 ATOM 161 CB ILE R 123 43.790 -29.684 39.507 1.00 83.26 ATOM 162 CG1 ILE R 123 45.199 -30.218 39.773 1.00 80.58 ATOM 163 CG2 ILE R 123 42.777 -30.814 39.594 1.00 83.64 ATOM 164 CD1 ILE R 123 45.637 -30.108 41.214 1.00 83.28 ATOM 165 N GLU R 124 44.249 -26.618 38.328 1.00111.97 ATOM 166 CA GLU R 124 45.135 -25.464 38.415 1.00114.44 ATOM 167 C GLU R 124 45.285 -25.040 39.867 1.00116.12 ATOM 168 O GLU R 124 44.293 -24.894 40.580 1.00108.92 ATOM 169 CB GLU R 124 44.610 -24.305 37.571 1.00116.29 ATOM 170 CG GLU R 124 44.609 -24.571 36.075 1.00119.03 ATOM 171 CD GLU R 124 43.746 -23.583 35.314 1.00123.95 ATOM 172 OE1 GLU R 124 42.631 -23.264 35.787 1.00120.63 ATOM 173 OE2 GLU R 124 44.182 -23.125 34.237 1.00128.95 ATOM 174 N CYS R 125 46.531 -24.888 40.306 1.00126.06 ATOM 175 CA CYS R 125 46.827 -24.303 41.610 1.00136.08 ATOM 176 C CYS R 125 47.517 -22.948 41.386 1.00143.58 ATOM 177 O CYS R 125 48.008 -22.672 40.282 1.00134.97 ATOM 178 CB CYS R 125 47.709 -25.231 42.473 1.00137.03 ATOM 179 SG CYS R 125 47.342 -27.011 42.467 1.00137.21 ATOM 180 N VAL R 126 47.531 -22.108 42.425 1.00152.19 ATOM 181 CA VAL R 126 48.252 -20.822 42.411 1.00152.37 ATOM 182 C VAL R 126 48.788 -20.479 43.817 1.00154.23 ATOM 183 O VAL R 126 48.181 -20.867 44.826 1.00147.76 ATOM 184 CB VAL R 126 47.389 -19.675 41.800 1.00144.68 ATOM 185 CG1 VAL R 126 46.177 -19.364 42.668 1.00139.89 ATOM 186 CG2 VAL R 126 48.224 -18.421 41.540 1.00136.19 ATOM 187 N HIS R 127 49.935 -19.787 43.869 1.00154.97 ATOM 188 CA HIS R 127 50.555 -19.339 45.130 1.00153.79 ATOM 189 C HIS R 127 49.599 -18.487 45.919 1.00158.85 ATOM 190 O HIS R 127 48.883 -17.661 45.344 1.00167.77 ATOM 191 CB HIS R 127 51.815 -18.507 44.870 1.00144.57 ATOM 192 CG HIS R 127 52.816 -19.154 43.943 1.00142.47 ATOM 193 ND1 HIS R 127 52.895 -18.841 42.636 1.00141.79 ATOM 194 CD2 HIS R 127 53.816 -20.097 44.183 1.00143.57 ATOM 195 CE1 HIS R 127 53.884 -19.557 42.061 1.00143.49 ATOM 196 NE2 HIS R 127 54.446 -20.327 43.009 1.00143.00 ATOM 197 N LYS R 128 49.577 -18.663 47.239 1.00152.65 ATOM 198 CA LYS R 128 48.784 -17.777 48.097 1.00146.21 ATOM 199 C LYS R 128 49.669 -16.690 48.707 1.00140.82 ATOM 200 O LYS R 128 49.206 -15.579 48.977 1.00134.77 ATOM 201 CB LYS R 128 48.047 -18.543 49.207 1.00144.02 ATOM 202 CG LYS R 128 47.661 -19.984 48.894 1.00133.12 ATOM 203 CD LYS R 128 48.492 -20.969 49.709 1.00131.18 ATOM 204 CE LYS R 128 48.053 -21.030 51.170 1.00121.68 ATOM 205 NZ LYS R 128 48.926 -21.911 51.994 1.00114.45 TER