HEADER Apoptosis/Immune System 18-OCT-13 4N90 TITLE Crystal structure of ternary complex of TRAIL, DR5, and Fab fragment TITLE 2 from a DR5 agonist antibody COMPND MOL_ID: 1; COMPND 2 MOLECULE: Tumor necrosis factor receptor superfamily member 10B; COMPND 3 CHAIN: R, S, T; COMPND 4 FRAGMENT: UNP residues ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.30 ANGSTORMS DBREF 4N90 T 4 129 UNP O14763 TR10B_HUMAN 57 182 SEQRES 1 T 26 LYS CYS ARG THR GLY CYS PRO ARG GLY MET VAL LYS VAL SEQRES 2 T 26 GLY ASP CYS THR PRO TRP SER ASP ILE GLU CYS VAL HIS ATOM 1 N LYS T 102 76.797 -31.663 33.566 1.00 72.94 ATOM 2 CA LYS T 102 77.153 -31.075 34.862 1.00 75.54 ATOM 3 C LYS T 102 78.345 -31.772 35.518 1.00 75.40 ATOM 4 O LYS T 102 78.361 -33.001 35.642 1.00 74.57 ATOM 5 CB LYS T 102 75.956 -31.123 35.820 1.00 80.00 ATOM 6 CG LYS T 102 74.698 -30.424 35.326 1.00 81.17 ATOM 7 CD LYS T 102 73.536 -30.665 36.277 1.00 82.31 ATOM 8 CE LYS T 102 72.253 -30.048 35.738 1.00 89.23 ATOM 9 NZ LYS T 102 71.037 -30.543 36.444 1.00 88.94 ATOM 10 N CYS T 103 79.335 -30.983 35.933 1.00 77.96 ATOM 11 CA CYS T 103 80.447 -31.493 36.742 1.00 81.91 ATOM 12 C CYS T 103 79.918 -32.042 38.059 1.00 84.31 ATOM 13 O CYS T 103 79.011 -31.458 38.647 1.00 86.59 ATOM 14 CB CYS T 103 81.469 -30.385 37.023 1.00 81.52 ATOM 15 SG CYS T 103 82.392 -29.885 35.554 1.00 87.95 ATOM 16 N ARG T 104 80.465 -33.168 38.513 1.00 86.83 ATOM 17 CA ARG T 104 80.155 -33.674 39.851 1.00 91.62 ATOM 18 C ARG T 104 80.715 -32.717 40.894 1.00 97.03 ATOM 19 O ARG T 104 81.693 -32.010 40.636 1.00 95.12 ATOM 20 CB ARG T 104 80.766 -35.048 40.080 1.00 88.47 ATOM 21 CG ARG T 104 80.167 -36.161 39.252 1.00 88.74 ATOM 22 CD ARG T 104 80.961 -37.440 39.458 1.00 93.63 ATOM 23 NE ARG T 104 82.400 -37.251 39.252 1.00 91.28 ATOM 24 CZ ARG T 104 83.302 -38.226 39.343 1.00 95.66 ATOM 25 NH1 ARG T 104 82.925 -39.467 39.639 1.00103.37 ATOM 26 NH2 ARG T 104 84.588 -37.963 39.144 1.00 98.87 ATOM 27 N THR T 105 80.097 -32.697 42.071 1.00101.37 ATOM 28 CA THR T 105 80.601 -31.877 43.170 1.00100.91 ATOM 29 C THR T 105 81.457 -32.699 44.126 1.00 96.91 ATOM 30 O THR T 105 82.644 -32.430 44.269 1.00 87.79 ATOM 31 CB THR T 105 79.476 -31.128 43.916 1.00101.71 ATOM 32 OG1 THR T 105 78.261 -31.890 43.845 1.00101.86 ATOM 33 CG2 THR T 105 79.247 -29.754 43.288 1.00 97.04 ATOM 34 N GLY T 106 80.860 -33.710 44.753 1.00102.84 ATOM 35 CA GLY T 106 81.598 -34.607 45.642 1.00116.06 ATOM 36 C GLY T 106 82.225 -35.792 44.923 1.00122.62 ATOM 37 O GLY T 106 81.886 -36.078 43.774 1.00125.26 ATOM 38 N CYS T 107 83.170 -36.453 45.594 1.00127.48 ATOM 39 CA CYS T 107 83.660 -37.771 45.188 1.00129.78 ATOM 40 C CYS T 107 82.966 -38.794 46.087 1.00135.15 ATOM 41 O CYS T 107 82.281 -38.407 47.038 1.00140.41 ATOM 42 CB CYS T 107 85.181 -37.887 45.366 1.00135.20 ATOM 43 SG CYS T 107 86.229 -36.736 44.434 1.00139.12 ATOM 44 N PRO T 108 83.117 -40.099 45.789 1.00142.94 ATOM 45 CA PRO T 108 82.650 -41.100 46.759 1.00151.78 ATOM 46 C PRO T 108 83.574 -41.222 47.979 1.00155.25 ATOM 47 O PRO T 108 84.682 -40.673 47.968 1.00155.86 ATOM 48 CB PRO T 108 82.652 -42.407 45.951 1.00152.81 ATOM 49 CG PRO T 108 82.637 -41.985 44.519 1.00147.68 ATOM 50 CD PRO T 108 83.419 -40.707 44.481 1.00144.78 ATOM 51 N ARG T 109 83.109 -41.918 49.021 1.00153.99 ATOM 52 CA ARG T 109 83.952 -42.259 50.174 1.00152.92 ATOM 53 C ARG T 109 85.116 -43.140 49.715 1.00157.44 ATOM 54 O ARG T 109 85.015 -43.845 48.703 1.00149.52 ATOM 55 CB ARG T 109 83.150 -42.986 51.263 1.00147.30 ATOM 56 CG ARG T 109 82.183 -42.115 52.048 1.00144.08 ATOM 57 CD ARG T 109 81.195 -42.975 52.820 1.00147.94 ATOM 58 NE ARG T 109 79.885 -42.316 52.941 1.00157.43 ATOM 59 CZ ARG T 109 79.307 -41.957 54.095 1.00160.57 ATOM 60 NH1 ARG T 109 79.903 -42.196 55.269 1.00159.84 ATOM 61 NH2 ARG T 109 78.111 -41.364 54.075 1.00161.52 ATOM 62 N GLY T 110 86.222 -43.087 50.457 1.00165.88 ATOM 63 CA GLY T 110 87.433 -43.845 50.122 1.00169.73 ATOM 64 C GLY T 110 88.109 -43.352 48.855 1.00169.50 ATOM 65 O GLY T 110 89.111 -43.921 48.408 1.00167.21 ATOM 66 N MET T 111 87.550 -42.288 48.283 1.00167.32 ATOM 67 CA MET T 111 88.039 -41.708 47.042 1.00160.32 ATOM 68 C MET T 111 88.342 -40.225 47.219 1.00151.27 ATOM 69 O MET T 111 87.533 -39.477 47.777 1.00145.84 ATOM 70 CB MET T 111 87.028 -41.916 45.909 1.00167.51 ATOM 71 CG MET T 111 86.850 -43.366 45.476 1.00169.50 ATOM 72 SD MET T 111 86.041 -43.533 43.871 1.00168.51 ATOM 73 CE MET T 111 87.393 -43.151 42.755 1.00158.62 ATOM 74 N VAL T 112 89.513 -39.818 46.734 1.00149.20 ATOM 75 CA VAL T 112 90.011 -38.448 46.887 1.00154.58 ATOM 76 C VAL T 112 90.176 -37.741 45.528 1.00160.54 ATOM 77 O VAL T 112 90.496 -38.377 44.522 1.00167.73 ATOM 78 CB VAL T 112 91.314 -38.419 47.733 1.00152.31 ATOM 79 CG1 VAL T 112 92.467 -39.116 47.016 1.00150.37 ATOM 80 CG2 VAL T 112 91.686 -36.998 48.137 1.00148.43 ATOM 81 N LYS T 113 89.959 -36.424 45.524 1.00156.11 ATOM 82 CA LYS T 113 89.854 -35.609 44.304 1.00148.78 ATOM 83 C LYS T 113 91.163 -34.920 43.880 1.00148.20 ATOM 84 O LYS T 113 91.731 -34.135 44.642 1.00153.68 ATOM 85 CB LYS T 113 88.755 -34.559 44.514 1.00141.11 ATOM 86 CG LYS T 113 88.640 -33.496 43.436 1.00137.98 ATOM 87 CD LYS T 113 87.649 -32.427 43.858 1.00128.15 ATOM 88 CE LYS T 113 87.584 -31.305 42.840 1.00119.94 ATOM 89 NZ LYS T 113 86.543 -30.321 43.230 1.00113.48 ATOM 90 N VAL T 114 91.624 -35.208 42.661 1.00141.59 ATOM 91 CA VAL T 114 92.781 -34.514 42.068 1.00136.68 ATOM 92 C VAL T 114 92.564 -34.140 40.602 1.00137.55 ATOM 93 O VAL T 114 92.574 -35.000 39.716 1.00140.41 ATOM 94 CB VAL T 114 94.106 -35.300 42.206 1.00135.76 ATOM 95 CG1 VAL T 114 94.801 -34.958 43.518 1.00139.69 ATOM 96 CG2 VAL T 114 93.878 -36.800 42.057 1.00135.00 ATOM 97 N GLY T 115 92.384 -32.845 40.358 1.00133.46 ATOM 98 CA GLY T 115 92.075 -32.337 39.027 1.00122.90 ATOM 99 C GLY T 115 90.684 -31.745 39.030 1.00116.93 ATOM 100 O GLY T 115 89.688 -32.473 39.100 1.00112.97 ATOM 101 N ASP T 116 90.627 -30.418 38.965 1.00115.33 ATOM 102 CA ASP T 116 89.370 -29.666 38.997 1.00117.10 ATOM 103 C ASP T 116 88.458 -29.956 37.796 1.00114.41 ATOM 104 O ASP T 116 88.802 -30.751 36.915 1.00117.06 ATOM 105 CB ASP T 116 89.664 -28.161 39.078 1.00119.27 ATOM 106 CG ASP T 116 90.067 -27.719 40.469 1.00118.83 ATOM 107 OD1 ASP T 116 89.246 -27.855 41.401 1.00117.61 ATOM 108 OD2 ASP T 116 91.201 -27.220 40.625 1.00119.44 ATOM 109 N CYS T 117 87.294 -29.307 37.777 1.00102.01 ATOM 110 CA CYS T 117 86.356 -29.410 36.662 1.00 92.17 ATOM 111 C CYS T 117 86.670 -28.364 35.582 1.00 84.99 ATOM 112 O CYS T 117 86.664 -27.162 35.854 1.00 80.21 ATOM 113 CB CYS T 117 84.909 -29.313 37.182 1.00 88.59 ATOM 114 SG CYS T 117 83.700 -28.439 36.155 1.00 83.35 ATOM 115 N THR T 118 86.966 -28.836 34.369 1.00 81.96 ATOM 116 CA THR T 118 87.236 -27.950 33.222 1.00 81.66 ATOM 117 C THR T 118 86.081 -27.916 32.191 1.00 77.59 ATOM 118 O THR T 118 85.160 -28.731 32.247 1.00 74.60 ATOM 119 CB THR T 118 88.580 -28.279 32.500 1.00 81.78 ATOM 120 OG1 THR T 118 88.348 -29.115 31.354 1.00 84.79 ATOM 121 CG2 THR T 118 89.579 -28.942 33.441 1.00 81.20 ATOM 122 N PRO T 119 86.123 -26.952 31.258 1.00 73.63 ATOM 123 CA PRO T 119 85.254 -26.990 30.093 1.00 71.16 ATOM 124 C PRO T 119 85.252 -28.317 29.327 1.00 68.26 ATOM 125 O PRO T 119 84.264 -28.608 28.663 1.00 66.45 ATOM 126 CB PRO T 119 85.824 -25.891 29.207 1.00 73.42 ATOM 127 CG PRO T 119 86.413 -24.905 30.162 1.00 75.05 ATOM 128 CD PRO T 119 86.745 -25.625 31.435 1.00 74.58 ATOM 129 N TRP T 120 86.325 -29.106 29.406 1.00 71.27 ATOM 130 CA TRP T 120 86.369 -30.396 28.689 1.00 75.29 ATOM 131 C TRP T 120 86.443 -31.627 29.538 1.00 74.61 ATOM 132 O TRP T 120 86.398 -32.740 29.007 1.00 76.94 ATOM 133 CB TRP T 120 87.500 -30.453 27.672 1.00 81.25 ATOM 134 CG TRP T 120 87.579 -29.245 26.807 1.00 87.77 ATOM 135 CD1 TRP T 120 87.081 -29.082 25.517 1.00 88.04 ATOM 136 CD2 TRP T 120 88.196 -27.967 27.158 1.00 96.14 ATOM 137 NE1 TRP T 120 87.345 -27.818 25.055 1.00 96.87 ATOM 138 CE2 TRP T 120 88.015 -27.094 25.991 1.00102.03 ATOM 139 CE3 TRP T 120 88.866 -27.472 28.285 1.00 96.26 ATOM 140 CZ2 TRP T 120 88.489 -25.783 25.974 1.00106.95 ATOM 141 CZ3 TRP T 120 89.342 -26.154 28.257 1.00 99.81 ATOM 142 CH2 TRP T 120 89.158 -25.330 27.129 1.00105.56 ATOM 143 N SER T 121 86.570 -31.483 30.849 1.00 73.81 ATOM 144 CA SER T 121 86.516 -32.682 31.672 1.00 81.71 ATOM 145 C SER T 121 85.738 -32.539 32.975 1.00 83.97 ATOM 146 O SER T 121 85.667 -31.457 33.564 1.00 78.49 ATOM 147 CB SER T 121 87.917 -33.247 31.938 1.00 84.28 ATOM 148 OG SER T 121 88.515 -32.600 33.047 1.00 92.13 ATOM 149 N ASP T 122 85.148 -33.660 33.389 1.00 88.84 ATOM 150 CA ASP T 122 84.588 -33.860 34.720 1.00 90.85 ATOM 151 C ASP T 122 85.658 -33.576 35.783 1.00 94.77 ATOM 152 O ASP T 122 86.794 -33.212 35.458 1.00 96.46 ATOM 153 CB ASP T 122 84.137 -35.322 34.828 1.00 89.42 ATOM 154 CG ASP T 122 82.920 -35.504 35.703 1.00 85.14 ATOM 155 OD1 ASP T 122 82.395 -34.492 36.217 1.00 80.66 ATOM 156 OD2 ASP T 122 82.488 -36.671 35.865 1.00 83.62 ATOM 157 N ILE T 123 85.315 -33.744 37.054 1.00 92.16 ATOM 158 CA ILE T 123 86.358 -33.800 38.067 1.00 94.95 ATOM 159 C ILE T 123 87.017 -35.178 38.018 1.00106.07 ATOM 160 O ILE T 123 86.431 -36.128 37.486 1.00110.66 ATOM 161 CB ILE T 123 85.832 -33.479 39.470 1.00 89.58 ATOM 162 CG1 ILE T 123 84.395 -33.990 39.638 1.00 88.01 ATOM 163 CG2 ILE T 123 85.923 -31.980 39.703 1.00 91.27 ATOM 164 CD1 ILE T 123 83.964 -34.176 41.080 1.00 88.29 ATOM 165 N GLU T 124 88.236 -35.284 38.543 1.00111.87 ATOM 166 CA GLU T 124 88.962 -36.551 38.515 1.00114.35 ATOM 167 C GLU T 124 89.246 -37.081 39.924 1.00116.42 ATOM 168 O GLU T 124 90.188 -36.640 40.584 1.00117.21 ATOM 169 CB GLU T 124 90.262 -36.399 37.721 1.00116.07 ATOM 170 CG GLU T 124 90.635 -37.621 36.884 1.00122.82 ATOM 171 CD GLU T 124 90.286 -37.474 35.405 1.00122.51 ATOM 172 OE1 GLU T 124 89.589 -36.499 35.035 1.00124.13 ATOM 173 OE2 GLU T 124 90.719 -38.337 34.604 1.00114.58 ATOM 174 N CYS T 125 88.428 -38.024 40.387 1.00118.84 ATOM 175 CA CYS T 125 88.647 -38.610 41.702 1.00123.83 ATOM 176 C CYS T 125 89.450 -39.901 41.596 1.00124.57 ATOM 177 O CYS T 125 89.193 -40.727 40.716 1.00116.23 ATOM 178 CB CYS T 125 87.325 -38.850 42.443 1.00131.64 ATOM 179 SG CYS T 125 86.214 -37.420 42.503 1.00149.75 ATOM 180 N VAL T 126 90.438 -40.033 42.486 1.00132.22 ATOM 181 CA VAL T 126 91.200 -41.277 42.714 1.00134.51 ATOM 182 C VAL T 126 90.865 -41.854 44.101 1.00141.08 ATOM 183 O VAL T 126 89.961 -41.355 44.767 1.00137.13 ATOM 184 CB VAL T 126 92.732 -41.078 42.571 1.00126.54 ATOM 185 CG1 VAL T 126 93.090 -40.635 41.163 1.00121.70 ATOM 186 CG2 VAL T 126 93.266 -40.093 43.604 1.00124.25 ATOM 187 N HIS T 127 91.599 -42.884 44.534 1.00145.52 ATOM 188 CA HIS T 127 91.271 -43.627 45.765 1.00141.89 ATOM 189 C HIS T 127 91.875 -43.068 47.028 1.00131.93 ATOM 190 O HIS T 127 93.081 -42.834 47.111 1.00127.90 ATOM 191 CB HIS T 127 91.638 -45.105 45.614 1.00142.04 ATOM 192 CG HIS T 127 90.835 -45.828 44.555 1.00142.02 ATOM 193 ND1 HIS T 127 89.788 -46.620 44.854 1.00140.85 ATOM 194 CD2 HIS T 127 90.959 -45.847 43.164 1.00140.81 ATOM 195 CE1 HIS T 127 89.268 -47.124 43.717 1.00144.08 ATOM 196 NE2 HIS T 127 89.986 -46.649 42.684 1.00143.73 TER