HEADER DNA BINDING PROTEIN/DNA 26-OCT-13 4NDH TITLE Human Aprataxin (Aptx) bound to DNA, AMP, and Zn - product complex COMPND MOL_ID: 1; COMPND 2 MOLECULE: Aprataxin; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.85 ANGSTORMS DBREF 4NDH B 165 342 UNP Q7Z2E3 APTX_HUMAN 179 356 SEQRES 1 B 25 PRO LEU ARG CYS HIS GLU CYS GLN GLN LEU LEU PRO SER SEQRES 2 B 25 ILE PRO GLN LEU LYS GLU HIS LEU ARG LYS HIS TRP ATOM 1 N PRO B 316 25.821 42.374 -57.490 1.00 34.59 ATOM 2 CA PRO B 316 25.195 42.526 -58.807 1.00 35.53 ATOM 3 C PRO B 316 23.764 42.006 -58.781 1.00 32.91 ATOM 4 O PRO B 316 23.470 41.070 -58.037 1.00 32.33 ATOM 5 CB PRO B 316 26.066 41.643 -59.709 1.00 38.69 ATOM 6 CG PRO B 316 27.402 41.640 -59.042 1.00 39.89 ATOM 7 CD PRO B 316 27.102 41.650 -57.565 1.00 36.97 ATOM 8 N LEU B 317 22.889 42.617 -59.573 1.00 30.29 ATOM 9 CA LEU B 317 21.474 42.268 -59.566 1.00 31.14 ATOM 10 C LEU B 317 21.252 40.855 -60.084 1.00 32.58 ATOM 11 O LEU B 317 21.743 40.491 -61.150 1.00 35.11 ATOM 12 CB LEU B 317 20.680 43.265 -60.412 1.00 30.75 ATOM 13 CG LEU B 317 20.644 44.711 -59.908 1.00 29.46 ATOM 14 CD1 LEU B 317 20.081 45.618 -60.981 1.00 30.43 ATOM 15 CD2 LEU B 317 19.830 44.834 -58.629 1.00 29.00 ATOM 16 N ARG B 318 20.517 40.056 -59.318 1.00 31.02 ATOM 17 CA ARG B 318 20.190 38.706 -59.748 1.00 32.50 ATOM 18 C ARG B 318 18.708 38.426 -59.539 1.00 32.95 ATOM 19 O ARG B 318 18.166 38.700 -58.466 1.00 31.12 ATOM 20 CB ARG B 318 21.029 37.680 -58.990 1.00 38.75 ATOM 21 CG ARG B 318 20.853 36.270 -59.515 1.00 45.22 ATOM 22 CD ARG B 318 21.499 35.227 -58.620 1.00 49.72 ATOM 23 NE ARG B 318 22.950 35.365 -58.542 1.00 53.62 ATOM 24 CZ ARG B 318 23.796 34.950 -59.482 1.00 57.21 ATOM 25 NH1 ARG B 318 23.339 34.385 -60.591 1.00 58.23 ATOM 26 NH2 ARG B 318 25.101 35.112 -59.316 1.00 58.97 ATOM 27 N CYS B 319 18.056 37.883 -60.563 1.00 32.63 ATOM 28 CA CYS B 319 16.645 37.521 -60.458 1.00 34.02 ATOM 29 C CYS B 319 16.434 36.501 -59.349 1.00 32.63 ATOM 30 O CYS B 319 17.233 35.583 -59.180 1.00 35.14 ATOM 31 CB CYS B 319 16.115 36.962 -61.779 1.00 36.34 ATOM 32 SG CYS B 319 14.343 36.593 -61.725 1.00 35.20 ATOM 33 N HIS B 320 15.360 36.666 -58.588 1.00 32.56 ATOM 34 CA HIS B 320 15.078 35.762 -57.480 1.00 34.56 ATOM 35 C HIS B 320 14.370 34.493 -57.945 1.00 35.48 ATOM 36 O HIS B 320 14.322 33.498 -57.221 1.00 37.78 ATOM 37 CB HIS B 320 14.244 36.472 -56.412 1.00 34.84 ATOM 38 CG HIS B 320 12.863 36.840 -56.864 1.00 34.37 ATOM 39 ND1 HIS B 320 12.618 37.537 -58.028 1.00 30.71 ATOM 40 CD2 HIS B 320 11.653 36.619 -56.296 1.00 35.14 ATOM 41 CE1 HIS B 320 11.316 37.721 -58.162 1.00 31.25 ATOM 42 NE2 HIS B 320 10.709 37.177 -57.122 1.00 31.79 ATOM 43 N GLU B 321 13.830 34.527 -59.158 1.00 35.88 ATOM 44 CA GLU B 321 13.097 33.382 -59.698 1.00 42.60 ATOM 45 C GLU B 321 13.978 32.411 -60.492 1.00 44.13 ATOM 46 O GLU B 321 13.884 31.194 -60.312 1.00 45.40 ATOM 47 CB GLU B 321 11.921 33.852 -60.566 1.00 45.13 ATOM 48 CG GLU B 321 10.851 34.639 -59.813 1.00 47.22 ATOM 49 CD GLU B 321 9.965 33.757 -58.946 1.00 52.88 ATOM 50 OE1 GLU B 321 10.003 32.517 -59.115 1.00 55.31 ATOM 51 OE2 GLU B 321 9.228 34.309 -58.097 1.00 53.38 ATOM 52 N CYS B 322 14.827 32.944 -61.368 1.00 41.40 ATOM 53 CA CYS B 322 15.647 32.101 -62.240 1.00 45.68 ATOM 54 C CYS B 322 17.149 32.367 -62.122 1.00 45.79 ATOM 55 O CYS B 322 17.949 31.746 -62.823 1.00 47.45 ATOM 56 CB CYS B 322 15.213 32.256 -63.699 1.00 46.00 ATOM 57 SG CYS B 322 15.618 33.864 -64.410 1.00 42.64 ATOM 58 N GLN B 323 17.517 33.301 -61.249 1.00 42.33 ATOM 59 CA GLN B 323 18.921 33.609 -60.950 1.00 43.75 ATOM 60 C GLN B 323 19.715 34.191 -62.117 1.00 44.03 ATOM 61 O GLN B 323 20.945 34.157 -62.114 1.00 45.23 ATOM 62 CB GLN B 323 19.657 32.398 -60.357 1.00 48.48 ATOM 63 CG GLN B 323 19.237 32.030 -58.938 1.00 50.25 ATOM 64 CD GLN B 323 17.861 31.389 -58.878 1.00 55.04 ATOM 65 OE1 GLN B 323 17.540 30.507 -59.675 1.00 59.25 ATOM 66 NE2 GLN B 323 17.037 31.840 -57.937 1.00 53.54 ATOM 67 N GLN B 324 19.014 34.731 -63.106 1.00 44.73 ATOM 68 CA GLN B 324 19.676 35.428 -64.200 1.00 46.82 ATOM 69 C GLN B 324 20.316 36.714 -63.678 1.00 43.33 ATOM 70 O GLN B 324 19.755 37.386 -62.809 1.00 35.17 ATOM 71 CB GLN B 324 18.670 35.744 -65.309 1.00 51.22 ATOM 72 CG GLN B 324 19.269 36.445 -66.520 1.00 58.52 ATOM 73 CD GLN B 324 18.251 36.673 -67.623 1.00 63.44 ATOM 74 OE1 GLN B 324 17.453 35.790 -67.940 1.00 65.46 ATOM 75 NE2 GLN B 324 18.271 37.865 -68.211 1.00 64.09 ATOM 76 N LEU B 325 21.497 37.046 -64.189 1.00 43.73 ATOM 77 CA LEU B 325 22.138 38.310 -63.838 1.00 40.66 ATOM 78 C LEU B 325 21.641 39.436 -64.742 1.00 39.58 ATOM 79 O LEU B 325 21.606 39.292 -65.963 1.00 41.14 ATOM 80 CB LEU B 325 23.662 38.195 -63.921 1.00 44.54 ATOM 81 CG LEU B 325 24.371 37.370 -62.845 1.00 48.47 ATOM 82 CD1 LEU B 325 25.857 37.243 -63.161 1.00 54.05 ATOM 83 CD2 LEU B 325 24.165 37.981 -61.462 1.00 47.86 ATOM 84 N LEU B 326 21.243 40.549 -64.133 1.00 36.93 ATOM 85 CA LEU B 326 20.782 41.717 -64.878 1.00 38.54 ATOM 86 C LEU B 326 21.692 42.914 -64.601 1.00 37.33 ATOM 87 O LEU B 326 22.129 43.119 -63.467 1.00 36.49 ATOM 88 CB LEU B 326 19.329 42.055 -64.522 1.00 37.60 ATOM 89 CG LEU B 326 18.203 41.294 -65.238 1.00 39.30 ATOM 90 CD1 LEU B 326 18.398 41.318 -66.746 1.00 44.00 ATOM 91 CD2 LEU B 326 18.066 39.865 -64.730 1.00 41.46 ATOM 92 N PRO B 327 21.982 43.712 -65.637 1.00 38.11 ATOM 93 CA PRO B 327 22.981 44.775 -65.491 1.00 39.80 ATOM 94 C PRO B 327 22.429 46.094 -64.961 1.00 36.42 ATOM 95 O PRO B 327 23.214 47.007 -64.714 1.00 38.80 ATOM 96 CB PRO B 327 23.499 44.955 -66.918 1.00 43.66 ATOM 97 CG PRO B 327 22.323 44.610 -67.773 1.00 44.78 ATOM 98 CD PRO B 327 21.542 43.552 -67.036 1.00 41.59 ATOM 99 N SER B 328 21.116 46.200 -64.787 1.00 29.59 ATOM 100 CA SER B 328 20.532 47.449 -64.311 1.00 30.10 ATOM 101 C SER B 328 19.126 47.261 -63.761 1.00 27.92 ATOM 102 O SER B 328 18.445 46.282 -64.073 1.00 27.11 ATOM 103 CB SER B 328 20.516 48.501 -65.429 1.00 33.83 ATOM 104 OG SER B 328 19.509 48.221 -66.387 1.00 34.43 ATOM 105 N ILE B 329 18.704 48.206 -62.927 1.00 27.24 ATOM 106 CA ILE B 329 17.349 48.213 -62.388 1.00 27.99 ATOM 107 C ILE B 329 16.267 48.251 -63.483 1.00 27.53 ATOM 108 O ILE B 329 15.328 47.458 -63.428 1.00 28.14 ATOM 109 CB ILE B 329 17.150 49.340 -61.326 1.00 25.08 ATOM 110 CG1 ILE B 329 17.910 49.004 -60.039 1.00 24.30 ATOM 111 CG2 ILE B 329 15.671 49.555 -61.022 1.00 26.64 ATOM 112 CD1 ILE B 329 17.371 47.777 -59.291 1.00 25.23 ATOM 113 N PRO B 330 16.399 49.145 -64.490 1.00 30.50 ATOM 114 CA PRO B 330 15.395 49.115 -65.567 1.00 31.35 ATOM 115 C PRO B 330 15.313 47.763 -66.279 1.00 31.22 ATOM 116 O PRO B 330 14.208 47.312 -66.588 1.00 28.40 ATOM 117 CB PRO B 330 15.895 50.184 -66.542 1.00 34.53 ATOM 118 CG PRO B 330 16.670 51.119 -65.691 1.00 34.65 ATOM 119 CD PRO B 330 17.349 50.259 -64.678 1.00 31.72 ATOM 120 N GLN B 331 16.455 47.124 -66.522 1.00 27.87 ATOM 121 CA GLN B 331 16.454 45.798 -67.136 1.00 31.93 ATOM 122 C GLN B 331 15.919 44.719 -66.195 1.00 28.30 ATOM 123 O GLN B 331 15.259 43.785 -66.642 1.00 30.48 ATOM 124 CB GLN B 331 17.838 45.419 -67.671 1.00 35.29 ATOM 125 CG GLN B 331 18.281 46.262 -68.852 1.00 38.18 ATOM 126 CD GLN B 331 19.525 45.722 -69.528 1.00 46.11 ATOM 127 OE1 GLN B 331 19.669 44.513 -69.722 1.00 48.83 ATOM 128 NE2 GLN B 331 20.436 46.620 -69.894 1.00 47.67 ATOM 129 N LEU B 332 16.194 44.849 -64.899 1.00 28.16 ATOM 130 CA LEU B 332 15.626 43.930 -63.913 1.00 28.69 ATOM 131 C LEU B 332 14.104 44.025 -63.904 1.00 30.42 ATOM 132 O LEU B 332 13.407 43.010 -63.990 1.00 27.83 ATOM 133 CB LEU B 332 16.163 44.210 -62.505 1.00 24.81 ATOM 134 CG LEU B 332 15.643 43.260 -61.418 1.00 31.58 ATOM 135 CD1 LEU B 332 16.004 41.817 -61.750 1.00 35.26 ATOM 136 CD2 LEU B 332 16.183 43.631 -60.046 1.00 32.85 ATOM 137 N LYS B 333 13.595 45.251 -63.813 1.00 28.68 ATOM 138 CA LYS B 333 12.158 45.472 -63.717 1.00 34.05 ATOM 139 C LYS B 333 11.442 44.954 -64.955 1.00 36.13 ATOM 140 O LYS B 333 10.313 44.474 -64.872 1.00 37.70 ATOM 141 CB LYS B 333 11.846 46.951 -63.454 1.00 35.03 ATOM 142 CG LYS B 333 12.210 47.394 -62.037 1.00 33.89 ATOM 143 CD LYS B 333 12.229 48.910 -61.870 1.00 36.17 ATOM 144 CE LYS B 333 10.848 49.492 -61.611 1.00 37.80 ATOM 145 NZ LYS B 333 10.306 49.104 -60.272 1.00 32.50 ATOM 146 N GLU B 334 12.115 45.033 -66.097 1.00 38.66 ATOM 147 CA GLU B 334 11.598 44.462 -67.332 1.00 42.26 ATOM 148 C GLU B 334 11.631 42.935 -67.293 1.00 38.68 ATOM 149 O GLU B 334 10.686 42.272 -67.723 1.00 37.94 ATOM 150 CB GLU B 334 12.406 44.974 -68.529 1.00 50.02 ATOM 151 CG GLU B 334 12.207 44.182 -69.812 1.00 60.40 ATOM 152 CD GLU B 334 10.861 44.434 -70.467 1.00 67.61 ATOM 153 OE1 GLU B 334 10.587 43.804 -71.511 1.00 72.03 ATOM 154 OE2 GLU B 334 10.081 45.264 -69.948 1.00 68.67 ATOM 155 N HIS B 335 12.728 42.383 -66.782 1.00 35.27 ATOM 156 CA HIS B 335 12.891 40.932 -66.700 1.00 37.31 ATOM 157 C HIS B 335 11.844 40.287 -65.792 1.00 36.26 ATOM 158 O HIS B 335 11.345 39.205 -66.088 1.00 40.86 ATOM 159 CB HIS B 335 14.296 40.572 -66.205 1.00 37.05 ATOM 160 CG HIS B 335 14.493 39.106 -65.958 1.00 38.43 ATOM 161 ND1 HIS B 335 14.926 38.239 -66.938 1.00 43.84 ATOM 162 CD2 HIS B 335 14.311 38.355 -64.846 1.00 37.18 ATOM 163 CE1 HIS B 335 15.006 37.018 -66.440 1.00 44.87 ATOM 164 NE2 HIS B 335 14.637 37.060 -65.172 1.00 41.07 ATOM 165 N LEU B 336 11.521 40.958 -64.689 1.00 36.06 ATOM 166 CA LEU B 336 10.585 40.425 -63.702 1.00 38.38 ATOM 167 C LEU B 336 9.177 40.225 -64.264 1.00 43.03 ATOM 168 O LEU B 336 8.412 39.412 -63.746 1.00 43.39 ATOM 169 CB LEU B 336 10.537 41.322 -62.462 1.00 35.15 ATOM 170 CG LEU B 336 11.817 41.358 -61.627 1.00 34.70 ATOM 171 CD1 LEU B 336 11.684 42.344 -60.475 1.00 33.51 ATOM 172 CD2 LEU B 336 12.169 39.962 -61.113 1.00 36.75 ATOM 173 N ARG B 337 8.842 40.961 -65.320 1.00 44.98 ATOM 174 CA ARG B 337 7.532 40.848 -65.957 0.37 48.99 ATOM 175 C ARG B 337 7.295 39.441 -66.496 1.00 52.40 ATOM 176 O ARG B 337 6.162 38.962 -66.537 1.00 54.96 ATOM 177 CB ARG B 337 7.400 41.856 -67.100 0.37 50.84 ATOM 178 CG ARG B 337 7.731 43.287 -66.723 0.37 49.81 ATOM 179 CD ARG B 337 7.364 44.240 -67.848 0.37 53.82 ATOM 180 NE ARG B 337 6.232 45.087 -67.489 0.37 55.66 ATOM 181 CZ ARG B 337 6.348 46.331 -67.037 0.37 54.49 ATOM 182 NH1 ARG B 337 7.549 46.875 -66.898 0.37 52.44 ATOM 183 NH2 ARG B 337 5.265 47.033 -66.731 0.37 55.88 ATOM 184 N LYS B 338 8.375 38.789 -66.912 1.00 51.53 ATOM 185 CA LYS B 338 8.305 37.447 -67.478 1.00 56.01 ATOM 186 C LYS B 338 7.860 36.397 -66.458 1.00 55.45 ATOM 187 O LYS B 338 7.355 35.341 -66.833 1.00 58.97 ATOM 188 CB LYS B 338 9.661 37.059 -68.069 1.00 59.40 ATOM 189 CG LYS B 338 10.196 38.060 -69.086 1.00 64.08 ATOM 190 CD LYS B 338 11.672 37.823 -69.390 1.00 67.42 ATOM 191 CE LYS B 338 11.895 36.482 -70.072 1.00 73.97 ATOM 192 NZ LYS B 338 13.342 36.205 -70.295 1.00 75.81 ATOM 193 N HIS B 339 8.046 36.685 -65.173 1.00 51.25 ATOM 194 CA HIS B 339 7.698 35.722 -64.131 1.00 52.86 ATOM 195 C HIS B 339 6.321 35.974 -63.526 1.00 57.68 ATOM 196 O HIS B 339 5.977 35.396 -62.496 1.00 59.84 ATOM 197 CB HIS B 339 8.757 35.701 -63.026 1.00 47.45 ATOM 198 CG HIS B 339 10.139 35.412 -63.520 1.00 45.25 ATOM 199 ND1 HIS B 339 10.518 34.175 -63.995 1.00 48.85 ATOM 200 CD2 HIS B 339 11.235 36.203 -63.612 1.00 43.29 ATOM 201 CE1 HIS B 339 11.787 34.217 -64.362 1.00 47.15 ATOM 202 NE2 HIS B 339 12.244 35.436 -64.140 1.00 38.88 ATOM 203 N TRP B 340 5.537 36.839 -64.162 1.00 60.86 ATOM 204 CA TRP B 340 4.170 37.083 -63.717 1.00 64.98 ATOM 205 C TRP B 340 3.202 36.216 -64.517 1.00 68.49 ATOM 206 O TRP B 340 2.362 35.515 -63.952 1.00 70.91 ATOM 207 CB TRP B 340 3.795 38.558 -63.876 1.00 66.62 ATOM 208 CG TRP B 340 4.736 39.519 -63.210 1.00 65.96 ATOM 209 CD1 TRP B 340 5.690 39.227 -62.277 1.00 65.29 ATOM 210 CD2 TRP B 340 4.815 40.931 -63.436 1.00 66.13 ATOM 211 NE1 TRP B 340 6.357 40.372 -61.909 1.00 62.68 ATOM 212 CE2 TRP B 340 5.838 41.431 -62.607 1.00 62.44 ATOM 213 CE3 TRP B 340 4.118 41.822 -64.260 1.00 69.06 ATOM 214 CZ2 TRP B 340 6.182 42.781 -62.578 1.00 62.02 ATOM 215 CZ3 TRP B 340 4.459 43.161 -64.228 1.00 67.32 ATOM 216 CH2 TRP B 340 5.482 43.628 -63.394 1.00 63.62 ATOM 217 ZN ZN B 402 14.204 35.593 -63.837 1.00 39.29 TER