HEADER TRANSFERASE 03-DEC-13 4NTZ TITLE Crystal structure of Adenylate kinase from Streptococcus pneumoniae COMPND MOL_ID: 1; COMPND 2 MOLECULE: Adenylate kinase; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.4.3; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.69 ANGSTORMS DBREF 4NTZ A 1 212 UNP Q04ML5 KAD_STRP2 1 212 SEQRES 1 A 30 GLY ARG ILE ILE HIS ARG VAL THR GLY GLU THR PHE HIS SEQRES 2 A 30 LYS VAL PHE ASN PRO PRO VAL ASP TYR LYS GLU GLU ASP SEQRES 3 A 30 TYR TYR GLN ARG ATOM 1 N GLY A 127 47.546 -10.949 16.828 1.00 9.64 ATOM 2 CA GLY A 127 46.684 -12.105 16.618 1.00 9.19 ATOM 3 C GLY A 127 47.270 -13.502 16.734 1.00 9.95 ATOM 4 O GLY A 127 46.482 -14.446 16.801 1.00 9.46 ATOM 5 N ARG A 128 48.597 -13.671 16.763 1.00 9.04 ATOM 6 CA ARG A 128 49.171 -15.023 16.663 1.00 8.64 ATOM 7 C ARG A 128 48.964 -15.707 17.996 1.00 9.11 ATOM 8 O ARG A 128 49.341 -15.161 19.019 1.00 9.42 ATOM 9 CB ARG A 128 50.675 -14.968 16.337 1.00 10.87 ATOM 10 CG ARG A 128 51.333 -16.285 16.271 1.00 12.90 ATOM 11 CD ARG A 128 50.708 -17.032 15.125 1.00 19.58 ATOM 12 NE ARG A 128 50.699 -16.259 13.869 1.00 28.34 ATOM 13 CZ ARG A 128 50.269 -16.730 12.702 1.00 20.82 ATOM 14 NH1 ARG A 128 49.825 -17.970 12.621 1.00 26.26 ATOM 15 NH2 ARG A 128 50.319 -15.971 11.616 1.00 30.74 ATOM 16 N ILE A 129 48.415 -16.915 17.963 1.00 6.46 ATOM 17 CA ILE A 129 48.104 -17.676 19.171 1.00 8.17 ATOM 18 C ILE A 129 48.617 -19.091 19.061 1.00 9.38 ATOM 19 O ILE A 129 48.737 -19.660 17.978 1.00 11.08 ATOM 20 CB ILE A 129 46.594 -17.652 19.500 1.00 6.92 ATOM 21 CG1 ILE A 129 45.774 -18.148 18.290 1.00 10.01 ATOM 22 CG2 ILE A 129 46.184 -16.260 19.996 1.00 9.26 ATOM 23 CD1 ILE A 129 44.279 -18.110 18.575 1.00 10.00 ATOM 24 N ILE A 130 48.982 -19.689 20.189 1.00 8.66 ATOM 25 CA ILE A 130 49.573 -21.049 20.127 1.00 11.49 ATOM 26 C ILE A 130 48.715 -21.976 20.987 1.00 9.07 ATOM 27 O ILE A 130 48.405 -21.613 22.124 1.00 7.97 ATOM 28 CB ILE A 130 50.975 -21.011 20.711 1.00 11.27 ATOM 29 CG1 ILE A 130 51.837 -20.079 19.841 1.00 13.44 ATOM 30 CG2 ILE A 130 51.599 -22.391 20.781 1.00 11.44 ATOM 31 CD1 ILE A 130 53.173 -19.778 20.503 1.00 19.37 ATOM 32 N HIS A 131 48.329 -23.139 20.453 1.00 9.29 ATOM 33 CA HIS A 131 47.459 -24.021 21.230 1.00 9.10 ATOM 34 C HIS A 131 48.197 -24.568 22.452 1.00 10.41 ATOM 35 O HIS A 131 49.371 -25.006 22.347 1.00 9.46 ATOM 36 CB HIS A 131 46.928 -25.191 20.361 1.00 8.34 ATOM 37 CG HIS A 131 45.785 -25.923 20.993 1.00 8.79 ATOM 38 ND1 HIS A 131 45.962 -26.976 21.877 1.00 9.34 ATOM 39 CD2 HIS A 131 44.440 -25.744 20.885 1.00 11.86 ATOM 40 CE1 HIS A 131 44.783 -27.421 22.276 1.00 10.48 ATOM 41 NE2 HIS A 131 43.839 -26.692 21.678 1.00 8.86 ATOM 42 N ARG A 132 47.514 -24.534 23.614 1.00 7.81 ATOM 43 CA ARG A 132 48.206 -24.787 24.882 1.00 8.77 ATOM 44 C ARG A 132 48.459 -26.268 25.111 1.00 12.64 ATOM 45 O ARG A 132 49.137 -26.637 26.064 1.00 13.92 ATOM 46 CB ARG A 132 47.430 -24.178 26.043 1.00 8.43 ATOM 47 CG ARG A 132 46.153 -24.919 26.442 1.00 10.23 ATOM 48 CD ARG A 132 45.637 -24.283 27.684 1.00 7.64 ATOM 49 NE ARG A 132 44.302 -24.805 28.059 1.00 9.25 ATOM 50 CZ ARG A 132 44.118 -25.951 28.729 1.00 10.48 ATOM 51 NH1 ARG A 132 45.149 -26.740 29.029 1.00 11.49 ATOM 52 NH2 ARG A 132 42.893 -26.341 29.021 1.00 13.51 ATOM 53 N VAL A 133 47.925 -27.125 24.247 1.00 9.06 ATOM 54 CA VAL A 133 48.157 -28.565 24.325 1.00 12.71 ATOM 55 C VAL A 133 48.885 -28.942 23.050 1.00 14.65 ATOM 56 O VAL A 133 48.461 -28.633 21.907 1.00 16.12 ATOM 57 CB VAL A 133 46.861 -29.388 24.469 1.00 12.12 ATOM 58 CG1 VAL A 133 47.174 -30.882 24.425 1.00 15.58 ATOM 59 CG2 VAL A 133 46.140 -29.025 25.735 1.00 13.64 ATOM 60 N THR A 134 49.990 -29.619 23.273 1.00 14.02 ATOM 61 CA THR A 134 51.146 -29.465 22.415 1.00 30.39 ATOM 62 C THR A 134 50.839 -29.667 20.930 1.00 33.18 ATOM 63 O THR A 134 50.685 -30.810 20.460 1.00 34.98 ATOM 64 CB THR A 134 52.313 -30.373 22.904 1.00 18.38 ATOM 65 OG1 THR A 134 53.085 -30.811 21.807 1.00 28.65 ATOM 66 CG2 THR A 134 51.772 -31.607 23.630 1.00 31.14 ATOM 67 N GLY A 135 50.727 -28.551 20.204 1.00 22.65 ATOM 68 CA GLY A 135 50.846 -28.640 18.785 1.00 22.55 ATOM 69 C GLY A 135 50.925 -27.402 17.869 1.00 28.34 ATOM 70 O GLY A 135 51.762 -27.431 16.939 1.00 37.18 ATOM 71 N GLU A 136 50.146 -26.314 18.054 1.00 13.09 ATOM 72 CA GLU A 136 49.760 -25.650 16.773 1.00 11.98 ATOM 73 C GLU A 136 49.560 -24.127 16.825 1.00 12.46 ATOM 74 O GLU A 136 48.936 -23.613 17.742 1.00 11.43 ATOM 75 CB GLU A 136 48.488 -26.312 16.229 1.00 12.71 ATOM 76 CG GLU A 136 48.584 -27.834 15.864 1.00 20.95 ATOM 77 CD GLU A 136 47.237 -28.416 15.432 1.00 25.35 ATOM 78 OE1 GLU A 136 46.424 -27.675 14.858 1.00 23.65 ATOM 79 OE2 GLU A 136 46.992 -29.622 15.671 1.00 36.30 ATOM 80 N THR A 137 49.999 -23.435 15.770 1.00 11.43 ATOM 81 CA THR A 137 49.923 -21.989 15.667 1.00 11.14 ATOM 82 C THR A 137 48.693 -21.592 14.864 1.00 11.20 ATOM 83 O THR A 137 48.424 -22.193 13.813 1.00 12.26 ATOM 84 CB THR A 137 51.187 -21.507 14.920 1.00 15.71 ATOM 85 OG1 THR A 137 52.336 -21.726 15.754 1.00 18.46 ATOM 86 CG2 THR A 137 51.098 -20.110 14.669 1.00 19.43 ATOM 87 N PHE A 138 47.966 -20.587 15.353 1.00 9.36 ATOM 88 CA PHE A 138 46.783 -20.045 14.637 1.00 10.96 ATOM 89 C PHE A 138 46.874 -18.531 14.715 1.00 8.93 ATOM 90 O PHE A 138 47.839 -17.960 15.251 1.00 9.12 ATOM 91 CB PHE A 138 45.465 -20.520 15.277 1.00 9.25 ATOM 92 CG PHE A 138 45.261 -22.010 15.229 1.00 9.44 ATOM 93 CD1 PHE A 138 44.611 -22.596 14.144 1.00 11.99 ATOM 94 CD2 PHE A 138 45.711 -22.823 16.259 1.00 10.00 ATOM 95 CE1 PHE A 138 44.434 -23.962 14.104 1.00 13.15 ATOM 96 CE2 PHE A 138 45.556 -24.156 16.233 1.00 10.08 ATOM 97 CZ PHE A 138 44.898 -24.764 15.175 1.00 13.50 ATOM 98 N HIS A 139 45.856 -17.855 14.186 1.00 8.87 ATOM 99 CA HIS A 139 45.855 -16.390 14.210 1.00 7.37 ATOM 100 C HIS A 139 44.430 -15.862 14.310 1.00 8.98 ATOM 101 O HIS A 139 43.568 -16.266 13.540 1.00 8.60 ATOM 102 CB HIS A 139 46.583 -15.859 12.956 1.00 9.92 ATOM 103 CG HIS A 139 46.923 -14.412 13.041 1.00 9.02 ATOM 104 ND1 HIS A 139 45.955 -13.430 13.080 1.00 9.03 ATOM 105 CD2 HIS A 139 48.110 -13.774 13.132 1.00 9.40 ATOM 106 CE1 HIS A 139 46.527 -12.252 13.157 1.00 9.26 ATOM 107 NE2 HIS A 139 47.837 -12.433 13.208 1.00 10.43 ATOM 108 N LYS A 140 44.169 -14.979 15.278 1.00 8.05 ATOM 109 CA LYS A 140 42.810 -14.500 15.544 1.00 9.12 ATOM 110 C LYS A 140 42.165 -13.817 14.340 1.00 9.95 ATOM 111 O LYS A 140 40.937 -13.876 14.181 1.00 10.49 ATOM 112 CB LYS A 140 42.793 -13.554 16.759 1.00 8.62 ATOM 113 CG LYS A 140 43.126 -14.245 18.062 1.00 10.40 ATOM 114 CD LYS A 140 42.956 -13.191 19.173 1.00 16.04 ATOM 115 CE LYS A 140 44.099 -13.216 20.151 1.00 17.81 ATOM 116 NZ LYS A 140 43.736 -12.480 21.486 1.00 20.25 ATOM 117 N VAL A 141 42.988 -13.196 13.489 1.00 9.07 ATOM 118 CA VAL A 141 42.446 -12.558 12.310 1.00 9.93 ATOM 119 C VAL A 141 42.538 -13.489 11.118 1.00 9.81 ATOM 120 O VAL A 141 41.516 -13.709 10.446 1.00 11.62 ATOM 121 CB VAL A 141 43.139 -11.259 11.979 1.00 9.60 ATOM 122 CG1 VAL A 141 42.588 -10.668 10.677 1.00 10.67 ATOM 123 CG2 VAL A 141 42.969 -10.273 13.146 1.00 11.26 ATOM 124 N PHE A 142 43.733 -14.037 10.859 1.00 8.22 ATOM 125 CA PHE A 142 44.006 -14.671 9.550 1.00 9.11 ATOM 126 C PHE A 142 43.681 -16.145 9.506 1.00 12.67 ATOM 127 O PHE A 142 43.505 -16.699 8.437 1.00 11.38 ATOM 128 CB PHE A 142 45.497 -14.554 9.145 1.00 9.41 ATOM 129 CG PHE A 142 46.038 -13.145 9.212 1.00 10.94 ATOM 130 CD1 PHE A 142 45.327 -12.100 8.643 1.00 13.73 ATOM 131 CD2 PHE A 142 47.245 -12.868 9.831 1.00 11.00 ATOM 132 CE1 PHE A 142 45.782 -10.824 8.711 1.00 15.00 ATOM 133 CE2 PHE A 142 47.717 -11.581 9.892 1.00 13.85 ATOM 134 CZ PHE A 142 46.982 -10.550 9.343 1.00 12.90 ATOM 135 N ASN A 143 43.642 -16.800 10.658 1.00 9.89 ATOM 136 CA ASN A 143 43.508 -18.237 10.674 1.00 11.00 ATOM 137 C ASN A 143 42.952 -18.691 12.035 1.00 9.63 ATOM 138 O ASN A 143 43.670 -19.269 12.809 1.00 10.89 ATOM 139 CB ASN A 143 44.905 -18.849 10.418 1.00 10.99 ATOM 140 CG ASN A 143 44.889 -20.374 10.408 1.00 13.34 ATOM 141 OD1 ASN A 143 43.856 -20.990 10.092 1.00 13.39 ATOM 142 ND2 ASN A 143 46.025 -20.987 10.743 1.00 11.73 ATOM 143 N PRO A 144 41.657 -18.428 12.330 1.00 8.98 ATOM 144 CA PRO A 144 41.092 -18.858 13.616 1.00 8.34 ATOM 145 C PRO A 144 40.977 -20.372 13.726 1.00 11.27 ATOM 146 O PRO A 144 40.658 -21.042 12.756 1.00 13.20 ATOM 147 CB PRO A 144 39.694 -18.236 13.621 1.00 12.40 ATOM 148 CG PRO A 144 39.338 -18.151 12.123 1.00 13.97 ATOM 149 CD PRO A 144 40.660 -17.719 11.489 1.00 9.95 ATOM 150 N PRO A 145 41.214 -20.917 14.917 1.00 8.87 ATOM 151 CA PRO A 145 41.085 -22.355 15.113 1.00 9.40 ATOM 152 C PRO A 145 39.628 -22.748 15.252 1.00 11.08 ATOM 153 O PRO A 145 38.762 -21.885 15.438 1.00 11.70 ATOM 154 CB PRO A 145 41.814 -22.582 16.454 1.00 10.94 ATOM 155 CG PRO A 145 41.561 -21.287 17.175 1.00 8.49 ATOM 156 CD PRO A 145 41.616 -20.209 16.161 1.00 9.71 ATOM 157 N VAL A 146 39.389 -24.063 15.165 1.00 10.38 ATOM 158 CA VAL A 146 38.062 -24.642 15.375 1.00 11.98 ATOM 159 C VAL A 146 37.604 -24.285 16.742 1.00 15.80 ATOM 160 O VAL A 146 38.323 -24.471 17.720 1.00 14.72 ATOM 161 CB VAL A 146 38.037 -26.157 15.138 1.00 16.19 ATOM 162 CG1 VAL A 146 36.697 -26.805 15.576 1.00 16.73 ATOM 163 CG2 VAL A 146 38.303 -26.425 13.683 1.00 15.74 ATOM 164 N ASP A 147 36.311 -24.037 16.733 1.00 16.59 ATOM 165 CA ASP A 147 35.567 -23.001 17.332 1.00 21.92 ATOM 166 C ASP A 147 36.409 -21.756 17.560 1.00 27.45 ATOM 167 O ASP A 147 36.437 -20.877 16.673 1.00 33.97 ATOM 168 CB ASP A 147 34.820 -23.530 18.530 1.00 26.73 ATOM 169 CG ASP A 147 34.872 -25.022 18.612 1.00 24.96 ATOM 170 OD1 ASP A 147 33.916 -25.736 18.092 1.00 24.11 ATOM 171 OD2 ASP A 147 35.896 -25.483 19.158 1.00 28.99 ATOM 172 N TYR A 148 37.032 -21.730 18.732 1.00 12.94 ATOM 173 CA TYR A 148 37.968 -20.746 19.287 1.00 11.35 ATOM 174 C TYR A 148 37.426 -20.294 20.635 1.00 13.06 ATOM 175 O TYR A 148 36.307 -19.757 20.736 1.00 14.19 ATOM 176 CB TYR A 148 38.222 -19.496 18.415 1.00 13.81 ATOM 177 CG TYR A 148 39.025 -18.483 19.200 1.00 12.06 ATOM 178 CD1 TYR A 148 38.417 -17.379 19.789 1.00 12.16 ATOM 179 CD2 TYR A 148 40.361 -18.700 19.424 1.00 12.17 ATOM 180 CE1 TYR A 148 39.140 -16.464 20.517 1.00 15.00 ATOM 181 CE2 TYR A 148 41.099 -17.820 20.192 1.00 11.51 ATOM 182 CZ TYR A 148 40.474 -16.693 20.726 1.00 15.59 ATOM 183 OH TYR A 148 41.177 -15.789 21.471 1.00 17.11 ATOM 184 N LYS A 149 38.245 -20.473 21.679 1.00 9.72 ATOM 185 CA LYS A 149 38.024 -19.775 22.939 1.00 9.49 ATOM 186 C LYS A 149 39.432 -19.456 23.476 1.00 10.25 ATOM 187 O LYS A 149 40.350 -20.315 23.405 1.00 9.93 ATOM 188 CB LYS A 149 37.166 -20.589 23.928 1.00 10.77 ATOM 189 CG LYS A 149 37.774 -21.926 24.414 1.00 10.35 ATOM 190 CD LYS A 149 36.699 -22.737 25.163 1.00 12.33 ATOM 191 CE LYS A 149 37.255 -24.043 25.772 1.00 10.30 ATOM 192 NZ LYS A 149 37.430 -25.041 24.646 1.00 9.86 ATOM 193 N GLU A 150 39.616 -18.244 23.992 1.00 11.62 ATOM 194 CA GLU A 150 40.930 -17.737 24.358 1.00 11.53 ATOM 195 C GLU A 150 41.730 -18.589 25.312 1.00 11.78 ATOM 196 O GLU A 150 42.968 -18.694 25.220 1.00 11.17 ATOM 197 CB GLU A 150 40.747 -16.314 24.897 1.00 14.23 ATOM 198 CG GLU A 150 41.985 -15.568 25.232 1.00 19.81 ATOM 199 CD GLU A 150 41.605 -14.239 25.803 1.00 27.78 ATOM 200 OE1 GLU A 150 41.808 -14.021 27.016 1.00 31.57 ATOM 201 OE2 GLU A 150 41.058 -13.425 25.019 1.00 30.59 ATOM 202 N GLU A 151 41.032 -19.233 26.242 1.00 9.19 ATOM 203 CA GLU A 151 41.713 -20.034 27.253 1.00 8.32 ATOM 204 C GLU A 151 42.412 -21.269 26.723 1.00 8.36 ATOM 205 O GLU A 151 43.109 -22.008 27.499 1.00 10.69 ATOM 206 CB GLU A 151 40.725 -20.390 28.380 1.00 11.35 ATOM 207 CG GLU A 151 39.463 -21.172 27.901 1.00 9.20 ATOM 208 CD GLU A 151 38.256 -20.268 27.621 1.00 11.52 ATOM 209 OE1 GLU A 151 38.332 -19.251 26.829 1.00 11.77 ATOM 210 OE2 GLU A 151 37.158 -20.593 28.158 1.00 9.96 ATOM 211 N ASP A 152 42.213 -21.569 25.429 1.00 8.49 ATOM 212 CA ASP A 152 42.858 -22.727 24.859 1.00 7.02 ATOM 213 C ASP A 152 44.231 -22.391 24.273 1.00 7.34 ATOM 214 O ASP A 152 44.902 -23.287 23.726 1.00 8.49 ATOM 215 CB ASP A 152 41.981 -23.371 23.777 1.00 5.96 ATOM 216 CG ASP A 152 40.705 -23.980 24.324 1.00 9.97 ATOM 217 OD1 ASP A 152 40.456 -24.018 25.554 1.00 8.20 ATOM 218 OD2 ASP A 152 39.957 -24.473 23.460 1.00 9.56 ATOM 219 N TYR A 153 44.610 -21.103 24.357 1.00 7.33 ATOM 220 CA TYR A 153 45.816 -20.614 23.650 1.00 7.62 ATOM 221 C TYR A 153 46.666 -19.762 24.537 1.00 8.67 ATOM 222 O TYR A 153 46.192 -19.249 25.560 1.00 11.85 ATOM 223 CB TYR A 153 45.458 -19.793 22.388 1.00 6.98 ATOM 224 CG TYR A 153 44.566 -20.638 21.552 1.00 6.81 ATOM 225 CD1 TYR A 153 45.083 -21.479 20.598 1.00 9.51 ATOM 226 CD2 TYR A 153 43.205 -20.615 21.767 1.00 9.56 ATOM 227 CE1 TYR A 153 44.252 -22.355 19.882 1.00 11.46 ATOM 228 CE2 TYR A 153 42.360 -21.490 21.056 1.00 9.27 ATOM 229 CZ TYR A 153 42.907 -22.338 20.145 1.00 7.15 ATOM 230 OH TYR A 153 42.046 -23.193 19.523 1.00 11.10 ATOM 231 N TYR A 154 47.957 -19.637 24.178 1.00 7.75 ATOM 232 CA TYR A 154 48.741 -18.580 24.814 1.00 8.54 ATOM 233 C TYR A 154 49.475 -17.838 23.732 1.00 9.99 ATOM 234 O TYR A 154 49.373 -18.195 22.563 1.00 9.99 ATOM 235 CB TYR A 154 49.731 -19.174 25.842 1.00 8.85 ATOM 236 CG TYR A 154 50.932 -19.926 25.277 1.00 8.66 ATOM 237 CD1 TYR A 154 52.171 -19.342 25.255 1.00 9.60 ATOM 238 CD2 TYR A 154 50.793 -21.223 24.759 1.00 9.32 ATOM 239 CE1 TYR A 154 53.306 -20.045 24.761 1.00 11.29 ATOM 240 CE2 TYR A 154 51.906 -21.917 24.252 1.00 11.40 ATOM 241 CZ TYR A 154 53.147 -21.308 24.281 1.00 11.18 ATOM 242 OH TYR A 154 54.221 -21.996 23.815 1.00 15.88 ATOM 243 N GLN A 155 50.234 -16.819 24.113 1.00 9.03 ATOM 244 CA GLN A 155 50.971 -16.066 23.108 1.00 6.98 ATOM 245 C GLN A 155 52.422 -15.914 23.456 1.00 10.03 ATOM 246 O GLN A 155 52.765 -15.775 24.652 1.00 12.41 ATOM 247 CB GLN A 155 50.399 -14.655 23.012 1.00 9.15 ATOM 248 CG GLN A 155 48.970 -14.652 22.413 1.00 8.85 ATOM 249 CD GLN A 155 48.532 -13.249 22.058 1.00 11.92 ATOM 250 OE1 GLN A 155 48.251 -12.407 22.938 1.00 12.50 ATOM 251 NE2 GLN A 155 48.408 -12.994 20.740 1.00 11.06 ATOM 252 N ARG A 156 53.264 -15.835 22.409 1.00 9.68 ATOM 253 CA ARG A 156 54.648 -15.388 22.609 1.00 12.90 ATOM 254 C ARG A 156 54.663 -13.933 23.060 1.00 10.81 ATOM 255 O ARG A 156 53.817 -13.094 22.659 1.00 9.49 ATOM 256 CB ARG A 156 55.420 -15.484 21.292 1.00 14.77 ATOM 257 CG ARG A 156 55.423 -16.878 20.653 1.00 17.61 ATOM 258 CD ARG A 156 56.428 -17.806 21.313 1.00 19.73 ATOM 259 NE ARG A 156 56.288 -19.126 20.709 1.00 18.48 ATOM 260 CZ ARG A 156 56.176 -20.280 21.381 1.00 26.32 ATOM 261 NH1 ARG A 156 56.219 -20.305 22.722 1.00 21.59 ATOM 262 NH2 ARG A 156 56.009 -21.416 20.698 1.00 23.10 TER