HEADER TRANSFERASE 09-JUL-14 4TYP TITLE Crystal structure of an adenylate kinase mutant--AKm1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: Adenylate kinase; COMPND 3 CHAIN: C, B, A, D; COMPND 4 MUTATION: YES; COMPND 5 EC: 2.7.4.3; COMPND 6 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.90 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS C 130 REMARK 465 SER C 131 REMARK 465 VAL C 132 REMARK 465 CYS C 133 REMARK 465 GLY C 134 REMARK 465 THR C 135 REMARK 465 GLY C 148 REMARK 465 ILE C 149 REMARK 465 CYS C 150 REMARK 465 ASP C 151 REMARK 465 LYS C 152 REMARK 465 ASP C 153 REMARK 465 GLY C 154 REMARK 465 GLY C 155 REMARK 465 GLU C 156 REMARK 465 LEU C 157 DBREF 4TYP C 1 217 UNP P16304 KAD_BACSU 1 217 SEQRES 1 C 35 GLY ARG ARG ILE CYS SER VAL CYS GLY THR THR TYR HIS SEQRES 2 C 35 LEU VAL PHE ASN PRO PRO LYS THR PRO GLY ILE CYS ASP SEQRES 3 C 35 LYS ASP GLY GLY GLU LEU TYR GLN ARG ATOM 1 N GLY C 126 14.385 8.231 99.573 1.00 69.40 ATOM 2 CA GLY C 126 14.259 6.760 99.503 1.00 70.90 ATOM 3 C GLY C 126 13.984 6.159 98.120 1.00 71.17 ATOM 4 O GLY C 126 13.914 4.939 97.984 1.00 73.42 ATOM 5 N ARG C 127 13.825 7.007 97.103 1.00 70.30 ATOM 6 CA ARG C 127 13.539 6.561 95.736 1.00 70.59 ATOM 7 C ARG C 127 14.745 5.914 95.072 1.00 73.15 ATOM 8 O ARG C 127 15.858 6.442 95.139 1.00 73.57 ATOM 9 CB ARG C 127 13.046 7.726 94.865 1.00 69.29 ATOM 10 CG ARG C 127 13.003 7.415 93.364 1.00 67.91 ATOM 11 CD ARG C 127 12.175 8.404 92.567 1.00 65.52 ATOM 12 NE ARG C 127 12.723 9.763 92.586 1.00 63.76 ATOM 13 CZ ARG C 127 12.279 10.767 91.831 1.00 62.29 ATOM 14 NH1 ARG C 127 12.831 11.964 91.920 1.00 60.73 ATOM 15 NH2 ARG C 127 11.277 10.571 90.960 1.00 62.25 ATOM 16 N ARG C 128 14.496 4.786 94.417 1.00 78.31 ATOM 17 CA ARG C 128 15.504 4.099 93.614 1.00 83.41 ATOM 18 C ARG C 128 14.895 3.758 92.256 1.00 86.99 ATOM 19 O ARG C 128 13.815 3.188 92.185 1.00 90.83 ATOM 20 CB ARG C 128 15.968 2.830 94.306 1.00 84.61 ATOM 21 CG ARG C 128 16.563 3.040 95.684 1.00 84.40 ATOM 22 CD ARG C 128 17.928 3.705 95.620 1.00 83.87 ATOM 23 NE ARG C 128 18.516 3.879 96.955 1.00 83.21 ATOM 24 CZ ARG C 128 18.216 4.856 97.814 1.00 81.95 ATOM 25 NH1 ARG C 128 18.818 4.905 98.994 1.00 81.45 ATOM 26 NH2 ARG C 128 17.324 5.790 97.506 1.00 81.84 ATOM 27 N ILE C 129 15.599 4.098 91.181 1.00 90.66 ATOM 28 CA ILE C 129 15.058 3.992 89.810 1.00 92.08 ATOM 29 C ILE C 129 15.904 3.043 88.969 1.00 90.13 ATOM 30 O ILE C 129 17.128 3.054 89.079 1.00 86.02 ATOM 31 CB ILE C 129 14.992 5.377 89.127 1.00 94.35 ATOM 32 CG1 ILE C 129 14.388 6.413 90.086 1.00 92.92 ATOM 33 CG2 ILE C 129 14.174 5.290 87.847 1.00 95.98 ATOM 34 CD1 ILE C 129 14.492 7.840 89.620 1.00 93.26 ATOM 35 N THR C 136 10.346 3.228 88.624 1.00104.98 ATOM 36 CA THR C 136 10.795 3.634 89.938 1.00103.05 ATOM 37 C THR C 136 10.483 2.595 91.008 1.00 99.55 ATOM 38 O THR C 136 9.620 1.735 90.840 1.00103.48 ATOM 39 CB THR C 136 10.173 4.973 90.357 1.00105.89 ATOM 40 OG1 THR C 136 8.745 4.842 90.444 1.00108.83 ATOM 41 CG2 THR C 136 10.550 6.060 89.362 1.00106.50 ATOM 42 N TYR C 137 11.227 2.689 92.106 1.00 93.55 ATOM 43 CA TYR C 137 10.999 1.903 93.318 1.00 90.21 ATOM 44 C TYR C 137 11.321 2.751 94.553 1.00 88.32 ATOM 45 O TYR C 137 11.956 3.798 94.459 1.00 86.72 ATOM 46 CB TYR C 137 11.866 0.646 93.316 1.00 90.48 ATOM 47 CG TYR C 137 11.348 -0.507 92.463 1.00 91.17 ATOM 48 CD1 TYR C 137 10.099 -1.076 92.704 1.00 89.91 ATOM 49 CD2 TYR C 137 12.129 -1.052 91.441 1.00 90.67 ATOM 50 CE1 TYR C 137 9.639 -2.130 91.941 1.00 89.97 ATOM 51 CE2 TYR C 137 11.677 -2.114 90.675 1.00 90.84 ATOM 52 CZ TYR C 137 10.428 -2.645 90.932 1.00 90.15 ATOM 53 OH TYR C 137 9.957 -3.689 90.185 1.00 91.20 ATOM 54 N HIS C 138 10.865 2.281 95.707 1.00 85.58 ATOM 55 CA HIS C 138 11.117 2.955 96.989 1.00 81.96 ATOM 56 C HIS C 138 11.535 1.966 98.055 1.00 81.83 ATOM 57 O HIS C 138 11.017 0.862 98.116 1.00 81.41 ATOM 58 CB HIS C 138 9.896 3.729 97.467 1.00 80.64 ATOM 59 CG HIS C 138 10.234 4.826 98.425 1.00 80.28 ATOM 60 ND1 HIS C 138 10.055 4.720 99.788 1.00 79.38 ATOM 61 CD2 HIS C 138 10.763 6.052 98.210 1.00 79.50 ATOM 62 CE1 HIS C 138 10.449 5.838 100.370 1.00 78.77 ATOM 63 NE2 HIS C 138 10.878 6.666 99.435 1.00 79.29 ATOM 64 N LEU C 139 12.437 2.409 98.924 1.00 82.72 ATOM 65 CA LEU C 139 13.123 1.524 99.866 1.00 86.29 ATOM 66 C LEU C 139 12.212 0.975 100.970 1.00 82.65 ATOM 67 O LEU C 139 12.447 -0.112 101.485 1.00 85.10 ATOM 68 CB LEU C 139 14.349 2.237 100.458 1.00 89.64 ATOM 69 CG LEU C 139 15.554 1.365 100.843 1.00 94.77 ATOM 70 CD1 LEU C 139 16.198 0.717 99.626 1.00 96.63 ATOM 71 CD2 LEU C 139 16.573 2.207 101.587 1.00 96.24 ATOM 72 N VAL C 140 11.176 1.723 101.308 1.00 78.60 ATOM 73 CA VAL C 140 10.245 1.353 102.384 1.00 76.96 ATOM 74 C VAL C 140 8.799 1.144 101.898 1.00 74.42 ATOM 75 O VAL C 140 8.044 0.425 102.538 1.00 74.82 ATOM 76 CB VAL C 140 10.336 2.367 103.569 1.00 76.10 ATOM 77 CG1 VAL C 140 10.306 3.806 103.083 1.00 75.31 ATOM 78 CG2 VAL C 140 9.244 2.143 104.610 1.00 75.25 ATOM 79 N PHE C 141 8.434 1.720 100.759 1.00 72.15 ATOM 80 CA PHE C 141 7.047 1.685 100.291 1.00 71.23 ATOM 81 C PHE C 141 6.785 0.650 99.210 1.00 72.71 ATOM 82 O PHE C 141 5.869 -0.156 99.333 1.00 73.75 ATOM 83 CB PHE C 141 6.615 3.046 99.765 1.00 70.13 ATOM 84 CG PHE C 141 6.587 4.114 100.815 1.00 69.68 ATOM 85 CD1 PHE C 141 5.876 3.930 101.994 1.00 70.08 ATOM 86 CD2 PHE C 141 7.255 5.312 100.623 1.00 68.35 ATOM 87 CE1 PHE C 141 5.843 4.919 102.964 1.00 69.91 ATOM 88 CE2 PHE C 141 7.224 6.309 101.582 1.00 67.92 ATOM 89 CZ PHE C 141 6.519 6.111 102.758 1.00 68.23 ATOM 90 N ASN C 142 7.589 0.698 98.155 1.00 72.00 ATOM 91 CA ASN C 142 7.512 -0.230 97.035 1.00 73.49 ATOM 92 C ASN C 142 8.855 -0.940 96.936 1.00 75.37 ATOM 93 O ASN C 142 9.630 -0.691 96.000 1.00 76.96 ATOM 94 CB ASN C 142 7.183 0.527 95.737 1.00 74.23 ATOM 95 CG ASN C 142 6.970 -0.395 94.544 1.00 75.65 ATOM 96 OD1 ASN C 142 7.046 -1.619 94.656 1.00 76.61 ATOM 97 ND2 ASN C 142 6.720 0.198 93.380 1.00 74.72 ATOM 98 N PRO C 143 9.149 -1.831 97.906 1.00 75.69 ATOM 99 CA PRO C 143 10.500 -2.340 98.004 1.00 76.38 ATOM 100 C PRO C 143 10.789 -3.432 96.984 1.00 77.81 ATOM 101 O PRO C 143 9.903 -4.231 96.687 1.00 77.35 ATOM 102 CB PRO C 143 10.571 -2.885 99.443 1.00 76.89 ATOM 103 CG PRO C 143 9.170 -2.868 99.980 1.00 76.61 ATOM 104 CD PRO C 143 8.260 -2.533 98.843 1.00 75.47 ATOM 105 N PRO C 144 12.012 -3.441 96.423 1.00 79.62 ATOM 106 CA PRO C 144 12.416 -4.530 95.554 1.00 81.65 ATOM 107 C PRO C 144 12.891 -5.722 96.359 1.00 84.39 ATOM 108 O PRO C 144 13.469 -5.554 97.427 1.00 84.00 ATOM 109 CB PRO C 144 13.583 -3.938 94.775 1.00 81.83 ATOM 110 CG PRO C 144 14.202 -2.990 95.729 1.00 79.91 ATOM 111 CD PRO C 144 13.072 -2.424 96.547 1.00 79.09 ATOM 112 N LYS C 145 12.676 -6.919 95.819 1.00 87.18 ATOM 113 CA LYS C 145 13.023 -8.164 96.513 1.00 88.40 ATOM 114 C LYS C 145 14.485 -8.175 96.946 1.00 90.11 ATOM 115 O LYS C 145 14.829 -8.702 97.997 1.00 90.52 ATOM 116 CB LYS C 145 12.752 -9.342 95.598 1.00 89.25 ATOM 117 CG LYS C 145 11.279 -9.580 95.313 1.00 89.08 ATOM 118 CD LYS C 145 11.138 -10.397 94.053 1.00 90.08 ATOM 119 CE LYS C 145 9.726 -10.899 93.831 1.00 90.73 ATOM 120 NZ LYS C 145 9.645 -11.772 92.628 1.00 91.45 ATOM 121 N THR C 146 15.332 -7.594 96.111 1.00 93.33 ATOM 122 CA THR C 146 16.738 -7.396 96.428 1.00 99.31 ATOM 123 C THR C 146 17.106 -5.935 96.105 1.00101.87 ATOM 124 O THR C 146 16.454 -5.315 95.280 1.00101.96 ATOM 125 CB THR C 146 17.629 -8.369 95.633 1.00101.64 ATOM 126 OG1 THR C 146 17.578 -8.043 94.236 1.00103.83 ATOM 127 CG2 THR C 146 17.179 -9.827 95.832 1.00102.18 ATOM 128 N PRO C 147 18.155 -5.378 96.748 1.00105.04 ATOM 129 CA PRO C 147 18.546 -3.997 96.459 1.00104.36 ATOM 130 C PRO C 147 19.359 -3.876 95.182 1.00107.82 ATOM 131 O PRO C 147 20.454 -4.428 95.096 1.00111.99 ATOM 132 CB PRO C 147 19.426 -3.599 97.665 1.00104.61 ATOM 133 CG PRO C 147 19.463 -4.782 98.559 1.00105.64 ATOM 134 CD PRO C 147 19.032 -5.967 97.763 1.00107.24 ATOM 135 N TYR C 158 19.551 2.772 90.380 1.00 93.01 ATOM 136 CA TYR C 158 20.446 3.843 90.818 1.00 88.20 ATOM 137 C TYR C 158 19.622 4.833 91.645 1.00 85.29 ATOM 138 O TYR C 158 18.406 4.658 91.810 1.00 83.90 ATOM 139 CB TYR C 158 21.173 4.499 89.623 1.00 87.15 ATOM 140 CG TYR C 158 20.437 5.608 88.898 1.00 81.39 ATOM 141 CD1 TYR C 158 19.409 5.315 88.013 1.00 80.60 ATOM 142 CD2 TYR C 158 20.803 6.946 89.066 1.00 78.00 ATOM 143 CE1 TYR C 158 18.732 6.325 87.341 1.00 78.66 ATOM 144 CE2 TYR C 158 20.141 7.957 88.393 1.00 76.07 ATOM 145 CZ TYR C 158 19.104 7.643 87.535 1.00 75.54 ATOM 146 OH TYR C 158 18.433 8.637 86.869 1.00 71.61 ATOM 147 N GLN C 159 20.291 5.847 92.174 1.00 84.71 ATOM 148 CA GLN C 159 19.629 6.917 92.949 1.00 84.42 ATOM 149 C GLN C 159 19.839 8.300 92.330 1.00 81.16 ATOM 150 O GLN C 159 20.972 8.696 92.092 1.00 86.48 ATOM 151 CB GLN C 159 20.100 6.920 94.404 1.00 86.75 ATOM 152 CG GLN C 159 21.602 6.809 94.566 1.00 90.75 ATOM 153 CD GLN C 159 22.057 6.907 96.008 1.00 95.26 ATOM 154 OE1 GLN C 159 21.255 6.864 96.949 1.00 96.91 ATOM 155 NE2 GLN C 159 23.362 7.048 96.190 1.00 98.19 ATOM 156 N ARG C 160 18.748 9.043 92.108 1.00 73.41 ATOM 157 CA ARG C 160 18.778 10.252 91.241 1.00 67.27 ATOM 158 C ARG C 160 19.660 11.345 91.829 1.00 63.33 ATOM 159 O ARG C 160 19.763 11.486 93.041 1.00 59.67 ATOM 160 CB ARG C 160 17.370 10.791 90.953 1.00 65.27 ATOM 161 CG ARG C 160 17.157 11.252 89.520 1.00 64.84 ATOM 162 CD ARG C 160 15.687 11.451 89.155 1.00 63.50 ATOM 163 NE ARG C 160 15.209 12.816 89.379 1.00 62.19 ATOM 164 CZ ARG C 160 13.963 13.212 89.162 1.00 60.09 ATOM 165 NH1 ARG C 160 13.619 14.469 89.391 1.00 58.06 ATOM 166 NH2 ARG C 160 13.051 12.345 88.712 1.00 61.43 ATOM 167 PA AP5 C 301 7.631 9.733 91.473 1.00 85.06 ATOM 168 O1A AP5 C 301 6.736 9.029 90.509 1.00 85.47 ATOM 169 O2A AP5 C 301 9.118 9.737 91.334 1.00 83.31 ATOM 170 O3A AP5 C 301 7.156 11.224 91.764 1.00 82.11 ATOM 171 PB AP5 C 301 7.536 12.446 90.824 1.00 82.08 ATOM 172 O1B AP5 C 301 6.372 13.343 90.912 1.00 83.44 ATOM 173 O2B AP5 C 301 7.938 12.007 89.463 1.00 87.22 ATOM 174 O3B AP5 C 301 8.740 13.177 91.541 1.00 82.71 ATOM 175 PG AP5 C 301 9.820 13.969 90.712 1.00 78.37 ATOM 176 O1G AP5 C 301 11.002 14.100 91.602 1.00 79.78 ATOM 177 O2G AP5 C 301 9.990 13.460 89.331 1.00 77.52 ATOM 178 O3G AP5 C 301 9.130 15.390 90.649 1.00 80.34 ATOM 179 PD AP5 C 301 9.833 16.629 89.957 1.00 80.72 ATOM 180 O1D AP5 C 301 8.743 17.383 89.257 1.00 79.27 ATOM 181 O2D AP5 C 301 10.699 17.378 90.913 1.00 78.06 ATOM 182 O3D AP5 C 301 10.828 15.885 88.973 1.00 79.69 ATOM 183 PE AP5 C 301 10.914 16.244 87.446 1.00 75.74 ATOM 184 O1E AP5 C 301 11.832 15.246 86.851 1.00 72.42 ATOM 185 O2E AP5 C 301 9.569 16.400 86.833 1.00 77.07 ATOM 186 O5F AP5 C 301 7.291 8.966 92.808 1.00 86.28 ATOM 187 C5F AP5 C 301 7.865 9.396 94.021 1.00 89.68 ATOM 188 C4F AP5 C 301 8.340 8.275 94.913 1.00 86.74 ATOM 189 O4F AP5 C 301 7.328 7.905 95.837 1.00 87.59 ATOM 190 C3F AP5 C 301 8.666 7.053 94.130 1.00 86.40 ATOM 191 O3F AP5 C 301 9.809 6.509 94.747 1.00 85.10 ATOM 192 C2F AP5 C 301 7.485 6.156 94.330 1.00 87.54 ATOM 193 O2F AP5 C 301 7.910 4.816 94.402 1.00 87.91 ATOM 194 C1F AP5 C 301 6.871 6.584 95.640 1.00 88.25 ATOM 195 N9A AP5 C 301 5.401 6.598 95.541 1.00 90.08 ATOM 196 C8A AP5 C 301 4.699 6.804 94.428 1.00 90.04 ATOM 197 N7A AP5 C 301 3.382 6.757 94.663 1.00 89.52 ATOM 198 C5A AP5 C 301 3.214 6.515 95.954 1.00 89.70 ATOM 199 C6A AP5 C 301 2.070 6.334 96.848 1.00 90.26 ATOM 200 N6A AP5 C 301 0.809 6.417 96.404 1.00 90.21 ATOM 201 N1A AP5 C 301 2.324 6.098 98.137 1.00 90.26 ATOM 202 C2A AP5 C 301 3.573 6.021 98.584 1.00 88.95 ATOM 203 N3A AP5 C 301 4.655 6.167 97.821 1.00 87.54 ATOM 204 C4A AP5 C 301 4.547 6.413 96.522 1.00 88.49 ATOM 205 O5J AP5 C 301 11.614 17.659 87.504 1.00 74.93 ATOM 206 C5J AP5 C 301 12.984 17.734 87.807 1.00 74.61 ATOM 207 C4J AP5 C 301 13.522 19.001 87.228 1.00 73.85 ATOM 208 O4J AP5 C 301 12.965 19.199 85.952 1.00 73.26 ATOM 209 C3J AP5 C 301 13.096 20.211 87.987 1.00 75.29 ATOM 210 O3J AP5 C 301 14.053 20.495 88.977 1.00 76.05 ATOM 211 C2J AP5 C 301 13.211 21.250 86.926 1.00 74.95 ATOM 212 O2J AP5 C 301 14.586 21.478 86.845 1.00 76.38 ATOM 213 C1J AP5 C 301 12.898 20.576 85.636 1.00 71.53 ATOM 214 N9B AP5 C 301 11.563 20.896 85.117 1.00 68.00 ATOM 215 C8B AP5 C 301 10.669 19.991 84.756 1.00 68.51 ATOM 216 N7B AP5 C 301 9.534 20.541 84.299 1.00 66.19 ATOM 217 C5B AP5 C 301 9.724 21.825 84.352 1.00 65.09 ATOM 218 C6B AP5 C 301 8.935 22.973 84.021 1.00 66.89 ATOM 219 N6B AP5 C 301 7.703 22.839 83.539 1.00 69.09 ATOM 220 N1B AP5 C 301 9.466 24.159 84.236 1.00 67.75 ATOM 221 C2B AP5 C 301 10.681 24.304 84.730 1.00 66.24 ATOM 222 N3B AP5 C 301 11.448 23.289 85.053 1.00 66.52 ATOM 223 C4B AP5 C 301 11.037 22.055 84.896 1.00 65.82 TER