HEADER TRANSFERASE 31-DEC-69 4TYP TITLE Crystal structure of an adenylate kinase mutant--AKm1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: Adenylate kinase; COMPND 3 CHAIN: C, B, A, D; COMPND 4 MUTATION: YES; COMPND 5 EC: 2.7.4.3; COMPND 6 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.90 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS D 130 REMARK 465 SER D 131 REMARK 465 VAL D 132 REMARK 465 CYS D 133 REMARK 465 GLY D 134 REMARK 465 THR D 135 REMARK 465 GLY D 148 REMARK 465 ILE D 149 REMARK 465 CYS D 150 REMARK 465 ASP D 151 REMARK 465 LYS D 152 REMARK 465 ASP D 153 REMARK 465 GLY D 154 REMARK 465 GLY D 155 REMARK 465 GLU D 156 DBREF 4TYP D 1 217 UNP P16304 KAD_BACSU 1 217 SEQRES 1 D 35 GLY ARG ARG ILE CYS SER VAL CYS GLY THR THR TYR HIS SEQRES 2 D 35 LEU VAL PHE ASN PRO PRO LYS THR PRO GLY ILE CYS ASP SEQRES 3 D 35 LYS ASP GLY GLY GLU LEU TYR GLN ARG ATOM 1 N GLY D 126 20.121 -10.677 136.463 1.00 55.38 ATOM 2 CA GLY D 126 19.515 -11.174 135.226 1.00 56.15 ATOM 3 C GLY D 126 18.348 -10.358 134.697 1.00 55.94 ATOM 4 O GLY D 126 17.965 -10.502 133.548 1.00 53.82 ATOM 5 N ARG D 127 17.793 -9.491 135.536 1.00 58.58 ATOM 6 CA ARG D 127 16.630 -8.681 135.154 1.00 61.06 ATOM 7 C ARG D 127 16.970 -7.755 133.996 1.00 63.91 ATOM 8 O ARG D 127 18.053 -7.182 133.938 1.00 66.33 ATOM 9 CB ARG D 127 16.109 -7.846 136.333 1.00 59.69 ATOM 10 CG ARG D 127 15.126 -6.756 135.912 1.00 59.74 ATOM 11 CD ARG D 127 14.301 -6.212 137.056 1.00 59.20 ATOM 12 NE ARG D 127 15.108 -5.524 138.056 1.00 59.65 ATOM 13 CZ ARG D 127 14.609 -4.818 139.062 1.00 61.04 ATOM 14 NH1 ARG D 127 15.428 -4.243 139.925 1.00 62.30 ATOM 15 NH2 ARG D 127 13.292 -4.688 139.222 1.00 62.69 ATOM 16 N ARG D 128 16.026 -7.629 133.079 1.00 64.78 ATOM 17 CA ARG D 128 16.116 -6.679 131.980 1.00 68.12 ATOM 18 C ARG D 128 14.755 -6.021 131.787 1.00 68.33 ATOM 19 O ARG D 128 13.723 -6.649 132.001 1.00 66.98 ATOM 20 CB ARG D 128 16.544 -7.409 130.708 1.00 69.74 ATOM 21 CG ARG D 128 17.895 -8.113 130.757 1.00 70.68 ATOM 22 CD ARG D 128 19.066 -7.140 130.674 1.00 72.85 ATOM 23 NE ARG D 128 20.362 -7.829 130.668 1.00 72.71 ATOM 24 CZ ARG D 128 20.992 -8.299 131.747 1.00 72.59 ATOM 25 NH1 ARG D 128 22.161 -8.902 131.605 1.00 71.71 ATOM 26 NH2 ARG D 128 20.471 -8.165 132.962 1.00 74.15 ATOM 27 N ILE D 129 14.763 -4.754 131.386 1.00 72.09 ATOM 28 CA ILE D 129 13.524 -4.012 131.165 1.00 75.90 ATOM 29 C ILE D 129 13.534 -3.320 129.805 1.00 79.45 ATOM 30 O ILE D 129 14.554 -2.791 129.371 1.00 78.01 ATOM 31 CB ILE D 129 13.294 -2.964 132.267 1.00 76.07 ATOM 32 CG1 ILE D 129 13.602 -3.559 133.645 1.00 75.44 ATOM 33 CG2 ILE D 129 11.873 -2.426 132.206 1.00 75.54 ATOM 34 CD1 ILE D 129 14.094 -2.548 134.655 1.00 76.84 ATOM 35 N THR D 136 9.496 -6.427 132.815 1.00 82.81 ATOM 36 CA THR D 136 10.663 -7.240 133.125 1.00 78.72 ATOM 37 C THR D 136 10.698 -8.552 132.387 1.00 75.97 ATOM 38 O THR D 136 9.711 -9.264 132.296 1.00 74.28 ATOM 39 CB THR D 136 10.734 -7.590 134.620 1.00 80.17 ATOM 40 OG1 THR D 136 9.406 -7.822 135.126 1.00 80.54 ATOM 41 CG2 THR D 136 11.395 -6.473 135.409 1.00 80.77 ATOM 42 N TYR D 137 11.872 -8.863 131.889 1.00 73.62 ATOM 43 CA TYR D 137 12.169 -10.176 131.374 1.00 74.12 ATOM 44 C TYR D 137 13.155 -10.767 132.342 1.00 70.89 ATOM 45 O TYR D 137 13.454 -10.190 133.379 1.00 68.87 ATOM 46 CB TYR D 137 12.801 -10.097 129.986 1.00 77.67 ATOM 47 CG TYR D 137 11.830 -9.637 128.949 1.00 81.51 ATOM 48 CD1 TYR D 137 10.633 -10.300 128.779 1.00 85.58 ATOM 49 CD2 TYR D 137 12.087 -8.527 128.160 1.00 85.11 ATOM 50 CE1 TYR D 137 9.718 -9.886 127.839 1.00 89.12 ATOM 51 CE2 TYR D 137 11.180 -8.099 127.219 1.00 88.37 ATOM 52 CZ TYR D 137 9.995 -8.785 127.067 1.00 91.99 ATOM 53 OH TYR D 137 9.070 -8.380 126.149 1.00101.26 ATOM 54 N HIS D 138 13.666 -11.931 132.000 1.00 68.98 ATOM 55 CA HIS D 138 14.824 -12.458 132.692 1.00 65.66 ATOM 56 C HIS D 138 15.717 -13.216 131.733 1.00 64.35 ATOM 57 O HIS D 138 15.252 -13.955 130.872 1.00 62.95 ATOM 58 CB HIS D 138 14.406 -13.381 133.833 1.00 65.94 ATOM 59 CG HIS D 138 15.425 -13.506 134.922 1.00 65.08 ATOM 60 ND1 HIS D 138 16.696 -13.976 134.699 1.00 65.46 ATOM 61 CD2 HIS D 138 15.361 -13.232 136.248 1.00 64.63 ATOM 62 CE1 HIS D 138 17.376 -13.984 135.826 1.00 64.30 ATOM 63 NE2 HIS D 138 16.587 -13.542 136.783 1.00 63.99 ATOM 64 N LEU D 139 17.019 -13.032 131.911 1.00 64.10 ATOM 65 CA LEU D 139 18.016 -13.677 131.068 1.00 64.78 ATOM 66 C LEU D 139 17.998 -15.195 131.208 1.00 63.04 ATOM 67 O LEU D 139 18.362 -15.908 130.274 1.00 65.29 ATOM 68 CB LEU D 139 19.415 -13.139 131.387 1.00 65.96 ATOM 69 CG LEU D 139 20.436 -13.201 130.249 1.00 67.19 ATOM 70 CD1 LEU D 139 20.102 -12.188 129.163 1.00 67.60 ATOM 71 CD2 LEU D 139 21.843 -12.974 130.779 1.00 68.33 ATOM 72 N VAL D 140 17.566 -15.699 132.356 1.00 62.36 ATOM 73 CA VAL D 140 17.576 -17.145 132.580 1.00 63.76 ATOM 74 C VAL D 140 16.190 -17.749 132.798 1.00 65.94 ATOM 75 O VAL D 140 15.741 -18.601 132.029 1.00 67.85 ATOM 76 CB VAL D 140 18.474 -17.519 133.776 1.00 63.23 ATOM 77 CG1 VAL D 140 18.588 -19.030 133.900 1.00 63.55 ATOM 78 CG2 VAL D 140 19.848 -16.886 133.627 1.00 63.70 ATOM 79 N PHE D 141 15.526 -17.307 133.859 1.00 67.90 ATOM 80 CA PHE D 141 14.240 -17.885 134.298 1.00 70.06 ATOM 81 C PHE D 141 13.261 -17.896 133.144 1.00 73.67 ATOM 82 O PHE D 141 12.378 -18.755 133.055 1.00 78.38 ATOM 83 CB PHE D 141 13.639 -17.096 135.448 1.00 69.99 ATOM 84 CG PHE D 141 14.506 -17.037 136.678 1.00 71.03 ATOM 85 CD1 PHE D 141 15.450 -18.027 136.972 1.00 70.67 ATOM 86 CD2 PHE D 141 14.329 -16.000 137.575 1.00 71.42 ATOM 87 CE1 PHE D 141 16.207 -17.948 138.126 1.00 70.40 ATOM 88 CE2 PHE D 141 15.079 -15.918 138.725 1.00 70.63 ATOM 89 CZ PHE D 141 16.025 -16.890 139.002 1.00 70.51 ATOM 90 N ASN D 142 13.435 -16.936 132.248 1.00 75.13 ATOM 91 CA ASN D 142 12.681 -16.912 130.996 1.00 77.85 ATOM 92 C ASN D 142 13.471 -16.193 129.907 1.00 79.75 ATOM 93 O ASN D 142 13.154 -15.052 129.587 1.00 77.36 ATOM 94 CB ASN D 142 11.319 -16.244 131.238 1.00 78.21 ATOM 95 CG ASN D 142 11.439 -14.789 131.632 1.00 74.81 ATOM 96 OD1 ASN D 142 12.304 -14.067 131.141 1.00 70.29 ATOM 97 ND2 ASN D 142 10.552 -14.342 132.504 1.00 74.42 ATOM 98 N PRO D 143 14.526 -16.847 129.342 1.00 84.04 ATOM 99 CA PRO D 143 15.260 -16.063 128.332 1.00 85.39 ATOM 100 C PRO D 143 14.372 -15.503 127.227 1.00 84.57 ATOM 101 O PRO D 143 13.341 -16.090 126.911 1.00 90.83 ATOM 102 CB PRO D 143 16.290 -17.058 127.780 1.00 87.39 ATOM 103 CG PRO D 143 16.461 -18.073 128.867 1.00 87.60 ATOM 104 CD PRO D 143 15.108 -18.200 129.496 1.00 85.93 ATOM 105 N PRO D 144 14.758 -14.356 126.652 1.00 80.90 ATOM 106 CA PRO D 144 13.934 -13.745 125.624 1.00 80.17 ATOM 107 C PRO D 144 14.045 -14.415 124.250 1.00 80.32 ATOM 108 O PRO D 144 14.968 -15.192 123.991 1.00 78.90 ATOM 109 CB PRO D 144 14.476 -12.325 125.557 1.00 79.57 ATOM 110 CG PRO D 144 15.904 -12.469 125.899 1.00 79.34 ATOM 111 CD PRO D 144 15.981 -13.574 126.906 1.00 80.02 ATOM 112 N LYS D 145 13.081 -14.098 123.393 1.00 78.14 ATOM 113 CA LYS D 145 13.043 -14.622 122.038 1.00 76.36 ATOM 114 C LYS D 145 14.377 -14.258 121.398 1.00 75.19 ATOM 115 O LYS D 145 15.067 -15.102 120.848 1.00 72.39 ATOM 116 CB LYS D 145 11.877 -13.996 121.251 1.00 76.98 ATOM 117 CG LYS D 145 11.226 -14.917 120.209 1.00 76.25 ATOM 118 CD LYS D 145 10.222 -15.879 120.859 1.00 74.75 ATOM 119 CE LYS D 145 8.951 -16.076 120.012 1.00 74.18 ATOM 120 NZ LYS D 145 8.077 -14.865 120.022 1.00 73.94 ATOM 121 N THR D 146 14.724 -12.984 121.501 1.00 76.23 ATOM 122 CA THR D 146 16.011 -12.470 121.057 1.00 79.83 ATOM 123 C THR D 146 16.501 -11.488 122.117 1.00 80.95 ATOM 124 O THR D 146 15.696 -10.831 122.781 1.00 82.32 ATOM 125 CB THR D 146 15.881 -11.744 119.698 1.00 81.41 ATOM 126 OG1 THR D 146 15.125 -12.548 118.768 1.00 82.36 ATOM 127 CG2 THR D 146 17.253 -11.421 119.099 1.00 82.08 ATOM 128 N PRO D 147 17.806 -11.398 122.243 1.00 80.95 ATOM 129 CA PRO D 147 18.438 -10.561 123.231 1.00 80.55 ATOM 130 C PRO D 147 18.100 -9.092 123.075 1.00 81.68 ATOM 131 O PRO D 147 18.989 -8.260 123.053 1.00 83.96 ATOM 132 CB PRO D 147 19.909 -10.804 122.960 1.00 81.46 ATOM 133 CG PRO D 147 19.980 -12.160 122.349 1.00 80.31 ATOM 134 CD PRO D 147 18.608 -12.589 121.959 1.00 79.64 ATOM 135 N LEU D 157 15.997 -3.813 124.851 1.00 92.11 ATOM 136 CA LEU D 157 16.286 -4.105 126.252 1.00 87.50 ATOM 137 C LEU D 157 17.347 -3.193 126.863 1.00 85.85 ATOM 138 O LEU D 157 18.166 -2.596 126.156 1.00 85.98 ATOM 139 CB LEU D 157 16.756 -5.544 126.409 1.00 85.17 ATOM 140 CG LEU D 157 15.696 -6.645 126.531 1.00 82.65 ATOM 141 CD1 LEU D 157 15.733 -7.259 127.913 1.00 79.26 ATOM 142 CD2 LEU D 157 14.286 -6.164 126.220 1.00 83.29 ATOM 143 N TYR D 158 17.296 -3.092 128.188 1.00 80.90 ATOM 144 CA TYR D 158 18.329 -2.444 129.001 1.00 78.19 ATOM 145 C TYR D 158 18.229 -2.920 130.454 1.00 74.65 ATOM 146 O TYR D 158 17.140 -3.263 130.917 1.00 75.63 ATOM 147 CB TYR D 158 18.171 -0.921 128.933 1.00 79.52 ATOM 148 CG TYR D 158 17.094 -0.361 129.851 1.00 78.08 ATOM 149 CD1 TYR D 158 15.744 -0.426 129.500 1.00 78.32 ATOM 150 CD2 TYR D 158 17.432 0.232 131.079 1.00 76.90 ATOM 151 CE1 TYR D 158 14.762 0.084 130.337 1.00 76.35 ATOM 152 CE2 TYR D 158 16.460 0.733 131.932 1.00 73.41 ATOM 153 CZ TYR D 158 15.130 0.659 131.560 1.00 72.03 ATOM 154 OH TYR D 158 14.166 1.156 132.396 1.00 67.86 ATOM 155 N GLN D 159 19.352 -2.954 131.170 1.00 70.93 ATOM 156 CA GLN D 159 19.336 -3.303 132.606 1.00 68.46 ATOM 157 C GLN D 159 19.329 -2.045 133.470 1.00 67.82 ATOM 158 O GLN D 159 19.818 -0.994 133.052 1.00 70.07 ATOM 159 CB GLN D 159 20.494 -4.222 132.994 1.00 67.87 ATOM 160 CG GLN D 159 21.845 -3.537 133.113 1.00 70.05 ATOM 161 CD GLN D 159 22.815 -4.285 134.024 1.00 69.31 ATOM 162 OE1 GLN D 159 22.475 -5.306 134.624 1.00 67.69 ATOM 163 NE2 GLN D 159 24.018 -3.747 134.158 1.00 71.45 ATOM 164 N ARG D 160 18.776 -2.166 134.675 1.00 65.17 ATOM 165 CA ARG D 160 18.654 -1.018 135.601 1.00 64.44 ATOM 166 C ARG D 160 20.002 -0.625 136.212 1.00 66.06 ATOM 167 O ARG D 160 20.865 -1.474 136.434 1.00 68.82 ATOM 168 CB ARG D 160 17.622 -1.288 136.711 1.00 60.56 ATOM 169 CG ARG D 160 16.709 -0.111 136.989 1.00 58.68 ATOM 170 CD ARG D 160 15.517 -0.518 137.829 1.00 56.44 ATOM 171 NE ARG D 160 15.862 -0.603 139.235 1.00 55.96 ATOM 172 CZ ARG D 160 15.020 -1.000 140.179 1.00 55.54 ATOM 173 NH1 ARG D 160 15.419 -1.071 141.446 1.00 55.76 ATOM 174 NH2 ARG D 160 13.777 -1.343 139.871 1.00 54.92 ATOM 175 PA AP5 D 301 11.055 -7.485 140.051 1.00 83.70 ATOM 176 O1A AP5 D 301 9.584 -7.665 140.328 1.00 84.79 ATOM 177 O2A AP5 D 301 11.482 -6.533 138.978 1.00 85.74 ATOM 178 O3A AP5 D 301 11.945 -7.159 141.351 1.00 81.42 ATOM 179 PB AP5 D 301 11.492 -6.338 142.650 1.00 77.23 ATOM 180 O1B AP5 D 301 11.169 -7.392 143.680 1.00 77.16 ATOM 181 O2B AP5 D 301 10.470 -5.288 142.284 1.00 76.42 ATOM 182 O3B AP5 D 301 12.880 -5.655 143.103 1.00 77.98 ATOM 183 PG AP5 D 301 13.256 -4.142 142.750 1.00 77.26 ATOM 184 O1G AP5 D 301 14.737 -3.991 142.742 1.00 76.54 ATOM 185 O2G AP5 D 301 12.476 -3.749 141.535 1.00 79.50 ATOM 186 O3G AP5 D 301 12.645 -3.286 143.963 1.00 82.92 ATOM 187 PD AP5 D 301 13.485 -2.773 145.224 1.00 82.39 ATOM 188 O1D AP5 D 301 12.600 -2.794 146.441 1.00 83.63 ATOM 189 O2D AP5 D 301 14.835 -3.412 145.271 1.00 81.25 ATOM 190 O3D AP5 D 301 13.719 -1.245 144.863 1.00 87.25 ATOM 191 PE AP5 D 301 12.585 -0.232 144.350 1.00 89.82 ATOM 192 O1E AP5 D 301 12.583 -0.247 142.848 1.00 89.34 ATOM 193 O2E AP5 D 301 11.305 -0.393 145.129 1.00 92.72 ATOM 194 O5F AP5 D 301 11.634 -8.921 139.704 1.00 87.54 ATOM 195 C5F AP5 D 301 13.020 -9.026 139.492 1.00 94.07 ATOM 196 C4F AP5 D 301 13.209 -10.269 138.674 1.00 97.46 ATOM 197 O4F AP5 D 301 12.785 -11.379 139.455 1.00100.96 ATOM 198 C3F AP5 D 301 12.347 -10.213 137.429 1.00 99.68 ATOM 199 O3F AP5 D 301 13.198 -10.293 136.290 1.00 98.28 ATOM 200 C2F AP5 D 301 11.394 -11.388 137.556 1.00101.98 ATOM 201 O2F AP5 D 301 11.231 -12.070 136.315 1.00 98.11 ATOM 202 C1F AP5 D 301 12.049 -12.252 138.613 1.00104.48 ATOM 203 N9A AP5 D 301 11.076 -12.968 139.441 1.00111.89 ATOM 204 C8A AP5 D 301 10.300 -12.475 140.421 1.00119.65 ATOM 205 N7A AP5 D 301 9.536 -13.455 140.969 1.00121.66 ATOM 206 C5A AP5 D 301 9.848 -14.590 140.323 1.00119.79 ATOM 207 C6A AP5 D 301 9.438 -16.003 140.373 1.00119.87 ATOM 208 N6A AP5 D 301 8.509 -16.421 141.256 1.00121.13 ATOM 209 N1A AP5 D 301 10.026 -16.856 139.508 1.00119.41 ATOM 210 C2A AP5 D 301 10.955 -16.467 138.618 1.00116.92 ATOM 211 N3A AP5 D 301 11.369 -15.195 138.517 1.00115.62 ATOM 212 C4A AP5 D 301 10.863 -14.251 139.324 1.00115.66 ATOM 213 O5J AP5 D 301 13.301 1.132 144.790 1.00 92.54 ATOM 214 C5J AP5 D 301 14.663 1.321 144.423 1.00 93.73 ATOM 215 C4J AP5 D 301 15.366 2.133 145.489 1.00 94.52 ATOM 216 O4J AP5 D 301 14.523 3.200 145.913 1.00 96.72 ATOM 217 C3J AP5 D 301 15.685 1.307 146.716 1.00 94.86 ATOM 218 O3J AP5 D 301 16.985 0.710 146.629 1.00 93.52 ATOM 219 C2J AP5 D 301 15.567 2.312 147.828 1.00 94.95 ATOM 220 O2J AP5 D 301 16.834 2.893 148.068 1.00 96.40 ATOM 221 C1J AP5 D 301 14.648 3.398 147.315 1.00 96.32 ATOM 222 N9B AP5 D 301 13.343 3.245 147.979 1.00 98.20 ATOM 223 C8B AP5 D 301 12.173 2.923 147.405 1.00100.17 ATOM 224 N7B AP5 D 301 11.186 2.859 148.328 1.00 99.31 ATOM 225 C5B AP5 D 301 11.735 3.156 149.515 1.00 97.57 ATOM 226 C6B AP5 D 301 11.276 3.273 150.909 1.00 94.31 ATOM 227 N6B AP5 D 301 9.993 3.061 151.243 1.00 95.39 ATOM 228 N1B AP5 D 301 12.186 3.591 151.849 1.00 93.38 ATOM 229 C2B AP5 D 301 13.480 3.805 151.560 1.00 93.84 ATOM 230 N3B AP5 D 301 13.968 3.713 150.313 1.00 95.62 ATOM 231 C4B AP5 D 301 13.161 3.398 149.277 1.00 97.59 TER