HEADER RIBOSOME 24-JUL-14 4U4N TITLE Crystal structure of Edeine bound to the yeast 80S ribosome COMPND MOL_ID: 77; COMPND 2 MOLECULE: 60S ribosomal protein L41-A; COMPND 3 CHAIN: Q1, q1; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.10 ANGSTORMS DBREF 4U4N q 1 25 UNP P0CX86 RL41A_YEAST 1 25 SEQRES 1 q1 25 MET ARG ALA LYS TRP ARG LYS LYS ARG THR ARG ARG LEU SEQRES 2 q1 25 LYS ARG LYS ARG ARG LYS VAL ARG ALA ARG SER LYS ATOM 1 N MET q 1 225.643 0.955 235.881 1.00 44.79 ATOM 2 CA MET q 1 225.217 0.432 234.590 1.00 43.52 ATOM 3 C MET q 1 226.011 1.049 233.451 1.00 42.85 ATOM 4 O MET q 1 226.474 2.196 233.555 1.00 42.99 ATOM 5 CB MET q 1 223.735 0.683 234.384 1.00 42.75 ATOM 6 CG MET q 1 223.317 2.141 234.476 1.00 42.45 ATOM 7 SD MET q 1 221.562 2.283 234.091 1.00 41.81 ATOM 8 CE MET q 1 221.501 1.170 232.719 1.00 41.37 ATOM 9 N ARG q 2 226.189 0.273 232.379 1.00 41.74 ATOM 10 CA ARG q 2 226.944 0.735 231.220 1.00 41.79 ATOM 11 C ARG q 2 226.372 2.077 230.780 1.00 41.20 ATOM 12 O ARG q 2 225.155 2.233 230.715 1.00 40.51 ATOM 13 CB ARG q 2 226.902 -0.269 230.060 1.00 41.69 ATOM 14 CG ARG q 2 226.666 0.404 228.728 1.00 41.28 ATOM 15 CD ARG q 2 227.437 -0.160 227.568 1.00 41.67 ATOM 16 NE ARG q 2 227.017 -1.505 227.220 1.00 41.63 ATOM 17 CZ ARG q 2 227.221 -2.087 226.046 1.00 41.80 ATOM 18 NH1 ARG q 2 227.828 -1.456 225.059 1.00 42.03 ATOM 19 NH2 ARG q 2 226.799 -3.318 225.867 1.00 41.85 ATOM 20 N ALA q 3 227.260 3.043 230.554 1.00 41.65 ATOM 21 CA ALA q 3 226.941 4.342 230.007 1.00 41.37 ATOM 22 C ALA q 3 225.846 4.268 228.969 1.00 40.66 ATOM 23 O ALA q 3 224.750 4.736 229.211 1.00 40.10 ATOM 24 CB ALA q 3 228.157 4.936 229.420 1.00 42.18 ATOM 25 N LYS q 4 226.138 3.669 227.825 1.00 41.35 ATOM 26 CA LYS q 4 225.157 3.523 226.750 1.00 40.96 ATOM 27 C LYS q 4 223.713 3.203 227.207 1.00 40.32 ATOM 28 O LYS q 4 222.764 3.776 226.684 1.00 40.07 ATOM 29 CB LYS q 4 225.638 2.451 225.778 1.00 41.28 ATOM 30 CG LYS q 4 224.604 2.039 224.763 1.00 41.07 ATOM 31 CD LYS q 4 225.160 1.046 223.760 1.00 41.51 ATOM 32 CE LYS q 4 225.855 1.772 222.627 1.00 42.09 ATOM 33 NZ LYS q 4 226.145 0.842 221.541 1.00 42.52 ATOM 34 N TRP q 5 223.558 2.316 228.188 1.00 41.81 ATOM 35 CA TRP q 5 222.244 1.954 228.734 1.00 41.79 ATOM 36 C TRP q 5 221.690 3.025 229.672 1.00 42.01 ATOM 37 O TRP q 5 220.477 3.266 229.708 1.00 42.18 ATOM 38 CB TRP q 5 222.316 0.631 229.477 1.00 41.65 ATOM 39 CG TRP q 5 222.861 -0.533 228.705 1.00 41.46 ATOM 40 CD1 TRP q 5 223.534 -1.617 229.221 1.00 41.54 ATOM 41 CD2 TRP q 5 222.780 -0.758 227.291 1.00 41.37 ATOM 42 NE1 TRP q 5 223.867 -2.491 228.215 1.00 41.29 ATOM 43 CE2 TRP q 5 223.411 -1.986 227.025 1.00 41.17 ATOM 44 CE3 TRP q 5 222.236 -0.041 226.221 1.00 41.69 ATOM 45 CZ2 TRP q 5 223.505 -2.506 225.740 1.00 41.10 ATOM 46 CZ3 TRP q 5 222.345 -0.562 224.938 1.00 41.85 ATOM 47 CH2 TRP q 5 222.976 -1.775 224.711 1.00 41.47 ATOM 48 N ARG q 6 222.580 3.640 230.445 1.00 43.58 ATOM 49 CA ARG q 6 222.258 4.839 231.207 1.00 43.87 ATOM 50 C ARG q 6 221.777 5.932 230.261 1.00 44.10 ATOM 51 O ARG q 6 220.920 6.762 230.620 1.00 44.35 ATOM 52 CB ARG q 6 223.472 5.342 231.989 1.00 44.23 ATOM 53 CG ARG q 6 223.158 5.846 233.373 1.00 44.53 ATOM 54 CD ARG q 6 223.247 7.359 233.515 1.00 44.90 ATOM 55 NE ARG q 6 224.525 7.780 234.119 1.00 45.57 ATOM 56 CZ ARG q 6 224.692 8.856 234.921 1.00 46.16 ATOM 57 NH1 ARG q 6 223.648 9.649 235.267 1.00 46.09 ATOM 58 NH2 ARG q 6 225.921 9.139 235.395 1.00 46.93 ATOM 59 N LYS q 7 222.359 5.963 229.062 1.00 41.46 ATOM 60 CA LYS q 7 221.917 6.922 228.073 1.00 41.50 ATOM 61 C LYS q 7 220.459 6.593 227.828 1.00 41.11 ATOM 62 O LYS q 7 219.594 7.318 228.287 1.00 40.85 ATOM 63 CB LYS q 7 222.741 6.845 226.815 1.00 42.05 ATOM 64 CG LYS q 7 222.536 7.993 225.896 1.00 42.41 ATOM 65 CD LYS q 7 223.800 8.262 225.075 1.00 43.22 ATOM 66 CE LYS q 7 223.480 8.811 223.710 1.00 43.78 ATOM 67 NZ LYS q 7 224.685 8.927 222.915 1.00 44.67 ATOM 68 N LYS q 8 220.191 5.460 227.188 1.00 42.64 ATOM 69 CA LYS q 8 218.828 4.976 226.983 1.00 42.83 ATOM 70 C LYS q 8 217.885 5.295 228.148 1.00 42.50 ATOM 71 O LYS q 8 216.740 5.697 227.942 1.00 42.95 ATOM 72 CB LYS q 8 218.854 3.464 226.734 1.00 42.65 ATOM 73 CG LYS q 8 217.617 2.906 226.020 1.00 43.20 ATOM 74 CD LYS q 8 217.715 1.406 225.793 1.00 43.05 ATOM 75 CE LYS q 8 218.577 1.083 224.598 1.00 43.53 ATOM 76 NZ LYS q 8 217.739 1.051 223.392 1.00 44.63 ATOM 77 N ARG q 9 218.380 5.155 229.372 1.00 43.84 ATOM 78 CA ARG q 9 217.553 5.440 230.544 1.00 43.79 ATOM 79 C ARG q 9 217.019 6.876 230.512 1.00 44.39 ATOM 80 O ARG q 9 215.802 7.080 230.457 1.00 44.81 ATOM 81 CB ARG q 9 218.337 5.195 231.842 1.00 43.37 ATOM 82 CG ARG q 9 217.512 4.887 233.070 1.00 43.47 ATOM 83 CD ARG q 9 218.355 5.192 234.255 1.00 43.59 ATOM 84 NE ARG q 9 218.180 4.337 235.432 1.00 43.79 ATOM 85 CZ ARG q 9 218.361 3.013 235.472 1.00 43.91 ATOM 86 NH1 ARG q 9 218.681 2.324 234.370 1.00 43.64 ATOM 87 NH2 ARG q 9 218.200 2.362 236.627 1.00 44.46 ATOM 88 N THR q 10 217.921 7.862 230.535 1.00 43.32 ATOM 89 CA THR q 10 217.508 9.270 230.547 1.00 43.95 ATOM 90 C THR q 10 216.695 9.639 229.310 1.00 45.00 ATOM 91 O THR q 10 215.793 10.436 229.397 1.00 45.53 ATOM 92 CB THR q 10 218.729 10.243 230.669 1.00 43.88 ATOM 93 OG1 THR q 10 219.523 10.214 229.473 1.00 44.25 ATOM 94 CG2 THR q 10 219.614 9.908 231.894 1.00 43.17 ATOM 95 N ARG q 11 217.007 9.049 228.167 1.00 44.28 ATOM 96 CA ARG q 11 216.220 9.275 226.968 1.00 45.65 ATOM 97 C ARG q 11 214.789 8.823 227.158 1.00 45.99 ATOM 98 O ARG q 11 213.865 9.463 226.655 1.00 47.13 ATOM 99 CB ARG q 11 216.825 8.560 225.765 1.00 46.05 ATOM 100 CG ARG q 11 218.097 9.239 225.267 1.00 46.02 ATOM 101 CD ARG q 11 218.048 9.513 223.771 1.00 47.62 ATOM 102 NE ARG q 11 219.162 10.361 223.315 1.00 47.81 ATOM 103 CZ ARG q 11 220.275 9.897 222.742 1.00 47.48 ATOM 104 NH1 ARG q 11 220.442 8.583 222.562 1.00 46.86 ATOM 105 NH2 ARG q 11 221.218 10.741 222.339 1.00 47.78 ATOM 106 N ARG q 12 214.594 7.720 227.869 1.00 45.31 ATOM 107 CA ARG q 12 213.254 7.325 228.243 1.00 45.28 ATOM 108 C ARG q 12 212.663 8.288 229.247 1.00 45.11 ATOM 109 O ARG q 12 211.554 8.778 229.059 1.00 45.87 ATOM 110 CB ARG q 12 213.271 5.941 228.808 1.00 44.23 ATOM 111 CG ARG q 12 213.630 4.928 227.780 1.00 44.39 ATOM 112 CD ARG q 12 213.981 3.626 228.439 1.00 43.32 ATOM 113 NE ARG q 12 214.175 2.585 227.451 1.00 43.47 ATOM 114 CZ ARG q 12 214.497 1.356 227.788 1.00 42.77 ATOM 115 NH1 ARG q 12 214.639 1.071 229.075 1.00 42.10 ATOM 116 NH2 ARG q 12 214.681 0.437 226.858 1.00 42.94 ATOM 117 N LEU q 13 213.406 8.565 230.311 1.00 44.17 ATOM 118 CA LEU q 13 212.981 9.540 231.300 1.00 43.97 ATOM 119 C LEU q 13 212.545 10.856 230.672 1.00 44.95 ATOM 120 O LEU q 13 211.541 11.405 231.070 1.00 45.25 ATOM 121 CB LEU q 13 214.100 9.800 232.286 1.00 43.25 ATOM 122 CG LEU q 13 213.710 9.807 233.761 1.00 42.79 ATOM 123 CD1 LEU q 13 214.767 10.557 234.548 1.00 42.59 ATOM 124 CD2 LEU q 13 212.325 10.378 234.017 1.00 43.07 ATOM 125 N LYS q 14 213.291 11.348 229.684 1.00 43.98 ATOM 126 CA LYS q 14 212.959 12.607 229.027 1.00 45.33 ATOM 127 C LYS q 14 211.631 12.544 228.268 1.00 46.73 ATOM 128 O LYS q 14 210.794 13.440 228.393 1.00 47.56 ATOM 129 CB LYS q 14 214.063 13.021 228.075 1.00 45.96 ATOM 130 CG LYS q 14 215.077 13.844 228.730 1.00 45.21 ATOM 131 CD LYS q 14 216.332 13.947 227.904 1.00 45.42 ATOM 132 CE LYS q 14 216.420 15.254 227.141 1.00 46.92 ATOM 133 NZ LYS q 14 217.840 15.534 226.741 1.00 46.72 ATOM 134 N ARG q 15 211.426 11.505 227.471 1.00 46.77 ATOM 135 CA ARG q 15 210.165 11.394 226.765 1.00 48.25 ATOM 136 C ARG q 15 209.009 11.382 227.764 1.00 47.62 ATOM 137 O ARG q 15 207.980 12.036 227.543 1.00 48.84 ATOM 138 CB ARG q 15 210.148 10.141 225.897 1.00 48.62 ATOM 139 CG ARG q 15 210.874 10.310 224.592 1.00 50.03 ATOM 140 CD ARG q 15 210.514 9.192 223.666 1.00 50.87 ATOM 141 NE ARG q 15 211.020 7.922 224.182 1.00 48.97 ATOM 142 CZ ARG q 15 212.211 7.411 223.849 1.00 48.38 ATOM 143 NH1 ARG q 15 212.990 8.086 222.993 1.00 49.53 ATOM 144 NH2 ARG q 15 212.626 6.224 224.346 1.00 46.77 ATOM 145 N LYS q 16 209.218 10.646 228.865 1.00 47.70 ATOM 146 CA LYS q 16 208.274 10.543 229.981 1.00 46.98 ATOM 147 C LYS q 16 207.983 11.895 230.625 1.00 47.18 ATOM 148 O LYS q 16 206.833 12.252 230.862 1.00 47.63 ATOM 149 CB LYS q 16 208.808 9.591 231.041 1.00 45.39 ATOM 150 CG LYS q 16 207.734 8.701 231.609 1.00 45.09 ATOM 151 CD LYS q 16 208.153 8.026 232.920 1.00 43.89 ATOM 152 CE LYS q 16 208.351 9.023 234.072 1.00 43.51 ATOM 153 NZ LYS q 16 208.914 8.390 235.320 1.00 42.79 ATOM 154 N ARG q 17 209.026 12.651 230.910 1.00 46.47 ATOM 155 CA ARG q 17 208.832 13.989 231.407 1.00 46.82 ATOM 156 C ARG q 17 208.038 14.818 230.432 1.00 48.77 ATOM 157 O ARG q 17 207.001 15.321 230.811 1.00 49.24 ATOM 158 CB ARG q 17 210.159 14.667 231.689 1.00 46.28 ATOM 159 CG ARG q 17 210.737 14.367 233.055 1.00 44.74 ATOM 160 CD ARG q 17 212.076 15.045 233.151 1.00 44.57 ATOM 161 NE ARG q 17 213.036 14.318 233.975 1.00 43.61 ATOM 162 CZ ARG q 17 212.966 14.250 235.301 1.00 42.88 ATOM 163 NH1 ARG q 17 211.951 14.853 235.946 1.00 42.83 ATOM 164 NH2 ARG q 17 213.899 13.576 235.977 1.00 42.41 ATOM 165 N ARG q 18 208.509 14.959 229.192 1.00 46.53 ATOM 166 CA ARG q 18 207.797 15.742 228.173 1.00 48.91 ATOM 167 C ARG q 18 206.292 15.538 228.183 1.00 49.58 ATOM 168 O ARG q 18 205.521 16.493 228.116 1.00 50.88 ATOM 169 CB ARG q 18 208.291 15.382 226.793 1.00 50.27 ATOM 170 CG ARG q 18 209.572 16.009 226.387 1.00 50.50 ATOM 171 CD ARG q 18 209.800 15.723 224.909 1.00 52.32 ATOM 172 NE ARG q 18 208.596 16.054 224.141 1.00 54.49 ATOM 173 CZ ARG q 18 208.579 16.423 222.851 1.00 56.24 ATOM 174 NH1 ARG q 18 207.406 16.724 222.262 1.00 57.69 ATOM 175 NH2 ARG q 18 209.725 16.510 222.142 1.00 56.48 ATOM 176 N LYS q 19 205.915 14.260 228.268 1.00 47.66 ATOM 177 CA LYS q 19 204.547 13.777 228.176 1.00 47.98 ATOM 178 C LYS q 19 203.736 14.164 229.392 1.00 47.15 ATOM 179 O LYS q 19 202.543 14.456 229.273 1.00 48.11 ATOM 180 CB LYS q 19 204.542 12.258 227.999 1.00 47.10 ATOM 181 CG LYS q 19 204.070 11.745 226.630 1.00 48.69 ATOM 182 CD LYS q 19 204.913 10.544 226.123 1.00 48.40 ATOM 183 CE LYS q 19 204.327 9.792 224.867 1.00 49.85 ATOM 184 NZ LYS q 19 203.453 8.588 225.149 1.00 49.30 ATOM 185 N VAL q 20 204.382 14.178 230.559 1.00 46.72 ATOM 186 CA VAL q 20 203.751 14.643 231.803 1.00 46.33 ATOM 187 C VAL q 20 203.576 16.153 231.822 1.00 47.10 ATOM 188 O VAL q 20 202.696 16.680 232.461 1.00 47.31 ATOM 189 CB VAL q 20 204.562 14.222 233.012 1.00 45.36 ATOM 190 CG1 VAL q 20 203.912 14.679 234.254 1.00 45.19 ATOM 191 CG2 VAL q 20 204.676 12.741 233.046 1.00 45.34 ATOM 192 N ARG q 21 204.417 16.869 231.105 1.00 46.08 ATOM 193 CA ARG q 21 204.256 18.306 231.048 1.00 46.44 ATOM 194 C ARG q 21 203.105 18.591 230.106 1.00 47.71 ATOM 195 O ARG q 21 202.133 19.244 230.471 1.00 48.15 ATOM 196 CB ARG q 21 205.549 18.986 230.587 1.00 46.33 ATOM 197 CG ARG q 21 205.530 20.501 230.710 1.00 46.70 ATOM 198 CD ARG q 21 206.763 21.037 231.355 1.00 46.10 ATOM 199 NE ARG q 21 207.611 21.799 230.452 1.00 46.75 ATOM 200 CZ ARG q 21 207.693 23.116 230.453 1.00 47.34 ATOM 201 NH1 ARG q 21 206.952 23.815 231.288 1.00 47.27 ATOM 202 NH2 ARG q 21 208.507 23.725 229.616 1.00 48.09 ATOM 203 N ALA q 22 203.214 18.056 228.896 1.00 51.90 ATOM 204 CA ALA q 22 202.185 18.177 227.866 1.00 53.36 ATOM 205 C ALA q 22 200.795 17.823 228.361 1.00 53.02 ATOM 206 O ALA q 22 199.799 18.259 227.795 1.00 54.26 ATOM 207 CB ALA q 22 202.540 17.304 226.700 1.00 53.94 ATOM 208 N ARG q 23 200.742 17.011 229.411 1.00 56.45 ATOM 209 CA ARG q 23 199.513 16.681 230.120 1.00 55.97 ATOM 210 C ARG q 23 198.727 17.921 230.514 1.00 56.72 ATOM 211 O ARG q 23 197.536 17.846 230.804 1.00 56.91 ATOM 212 CB ARG q 23 199.851 15.874 231.367 1.00 53.97 ATOM 213 CG ARG q 23 198.676 15.411 232.134 1.00 53.49 ATOM 214 CD ARG q 23 198.451 13.971 231.819 1.00 53.27 ATOM 215 NE ARG q 23 198.740 13.154 232.990 1.00 51.70 ATOM 216 CZ ARG q 23 197.843 12.905 233.947 1.00 51.34 ATOM 217 NH1 ARG q 23 196.617 13.432 233.826 1.00 52.31 ATOM 218 NH2 ARG q 23 198.170 12.148 235.015 1.00 50.16 ATOM 219 N SER q 24 199.393 19.067 230.533 1.00 56.62 ATOM 220 CA SER q 24 198.747 20.298 230.940 1.00 57.15 ATOM 221 C SER q 24 198.985 21.296 229.877 1.00 58.46 ATOM 222 O SER q 24 199.057 22.484 230.156 1.00 58.64 ATOM 223 CB SER q 24 199.314 20.804 232.252 1.00 56.13 ATOM 224 OG SER q 24 200.729 20.780 232.199 1.00 55.54 ATOM 225 N LYS q 25 199.120 20.791 228.656 1.00 59.63 ATOM 226 CA LYS q 25 199.515 21.580 227.485 1.00 60.98 ATOM 227 C LYS q 25 200.935 22.134 227.703 1.00 60.46 ATOM 228 O LYS q 25 201.681 21.673 228.591 1.00 59.17 ATOM 229 CB LYS q 25 198.506 22.716 227.191 1.00 62.11 ATOM 230 CG LYS q 25 197.019 22.320 227.355 1.00 62.40 ATOM 231 CD LYS q 25 196.626 21.027 226.598 1.00 62.90 ATOM 232 CE LYS q 25 195.102 20.863 226.477 1.00 63.68 ATOM 233 NZ LYS q 25 194.613 20.685 225.046 1.00 65.47 TER