HEADER ribosome 24-JUL-14 4U4O TITLE Crystal structure of Geneticin bound to the yeast 80S ribosome COMPND MOL_ID: 77; COMPND 2 MOLECULE: 60S ribosomal protein L41-A; COMPND 3 CHAIN: Q1, q1; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.60 ANGSTORMS DBREF 4U4O q 1 25 UNP P0CX86 RL41A_YEAST 1 25 SEQRES 1 q1 25 MET ARG ALA LYS TRP ARG LYS LYS ARG THR ARG ARG LEU SEQRES 2 q1 25 LYS ARG LYS ARG ARG LYS VAL ARG ALA ARG SER LYS ATOM 1 N MET q 1 225.142 1.590 236.688 1.00 65.45 ATOM 2 CA MET q 1 224.691 0.810 235.546 1.00 65.54 ATOM 3 C MET q 1 225.212 1.362 234.237 1.00 65.64 ATOM 4 O MET q 1 225.668 2.487 234.168 1.00 65.56 ATOM 5 CB MET q 1 223.215 0.813 235.522 1.00 65.21 ATOM 6 CG MET q 1 222.779 2.195 235.654 1.00 64.80 ATOM 7 SD MET q 1 221.084 2.375 235.183 1.00 64.56 ATOM 8 CE MET q 1 221.034 2.036 233.442 1.00 64.83 ATOM 9 N ARG q 2 225.125 0.569 233.186 1.00 65.90 ATOM 10 CA ARG q 2 225.860 0.884 231.971 1.00 66.21 ATOM 11 C ARG q 2 225.492 2.250 231.444 1.00 65.94 ATOM 12 O ARG q 2 224.323 2.543 231.318 1.00 65.62 ATOM 13 CB ARG q 2 225.618 -0.195 230.896 1.00 66.55 ATOM 14 CG ARG q 2 225.708 0.294 229.412 1.00 66.79 ATOM 15 CD ARG q 2 227.006 -0.062 228.637 1.00 67.44 ATOM 16 NE ARG q 2 226.934 -1.299 227.845 1.00 67.87 ATOM 17 CZ ARG q 2 226.585 -1.374 226.566 1.00 68.16 ATOM 18 NH1 ARG q 2 226.261 -0.280 225.899 1.00 68.08 ATOM 19 NH2 ARG q 2 226.560 -2.554 225.958 1.00 68.60 ATOM 20 N ALA q 3 226.493 3.080 231.156 1.00 66.18 ATOM 21 CA ALA q 3 226.279 4.390 230.551 1.00 66.08 ATOM 22 C ALA q 3 225.131 4.394 229.591 1.00 65.97 ATOM 23 O ALA q 3 224.118 5.022 229.843 1.00 65.58 ATOM 24 CB ALA q 3 227.465 4.826 229.862 1.00 66.63 ATOM 25 N LYS q 4 225.235 3.643 228.512 1.00 66.39 ATOM 26 CA LYS q 4 224.123 3.668 227.565 1.00 66.41 ATOM 27 C LYS q 4 222.745 3.237 228.067 1.00 66.06 ATOM 28 O LYS q 4 221.787 3.744 227.555 1.00 66.04 ATOM 29 CB LYS q 4 224.425 2.842 226.324 1.00 67.01 ATOM 30 CG LYS q 4 224.293 3.670 225.042 1.00 67.40 ATOM 31 CD LYS q 4 223.950 2.810 223.818 1.00 67.95 ATOM 32 CE LYS q 4 224.889 1.615 223.586 1.00 68.37 ATOM 33 NZ LYS q 4 224.524 0.881 222.329 1.00 68.98 ATOM 34 N TRP q 5 222.577 2.348 229.029 1.00 65.88 ATOM 35 CA TRP q 5 221.192 2.083 229.415 1.00 65.67 ATOM 36 C TRP q 5 220.783 3.131 230.378 1.00 65.21 ATOM 37 O TRP q 5 219.649 3.157 230.822 1.00 65.05 ATOM 38 CB TRP q 5 220.978 0.708 230.025 1.00 65.78 ATOM 39 CG TRP q 5 221.707 -0.328 229.289 1.00 66.25 ATOM 40 CD1 TRP q 5 222.548 -1.286 229.808 1.00 66.44 ATOM 41 CD2 TRP q 5 221.734 -0.499 227.871 1.00 66.69 ATOM 42 NE1 TRP q 5 223.087 -2.048 228.782 1.00 66.94 ATOM 43 CE2 TRP q 5 222.593 -1.577 227.592 1.00 67.10 ATOM 44 CE3 TRP q 5 221.107 0.149 226.808 1.00 66.85 ATOM 45 CZ2 TRP q 5 222.822 -2.002 226.316 1.00 67.63 ATOM 46 CZ3 TRP q 5 221.344 -0.278 225.542 1.00 67.41 ATOM 47 CH2 TRP q 5 222.183 -1.333 225.303 1.00 67.78 ATOM 48 N ARG q 6 221.721 4.004 230.706 1.00 66.32 ATOM 49 CA ARG q 6 221.393 5.151 231.521 1.00 65.94 ATOM 50 C ARG q 6 220.925 6.274 230.647 1.00 65.98 ATOM 51 O ARG q 6 219.919 6.893 230.966 1.00 65.76 ATOM 52 CB ARG q 6 222.565 5.594 232.363 1.00 65.87 ATOM 53 CG ARG q 6 222.393 5.197 233.816 1.00 65.64 ATOM 54 CD ARG q 6 222.941 6.196 234.799 1.00 65.48 ATOM 55 NE ARG q 6 223.160 7.484 234.146 1.00 65.49 ATOM 56 CZ ARG q 6 222.193 8.362 233.819 1.00 65.28 ATOM 57 NH1 ARG q 6 220.886 8.075 234.078 1.00 65.06 ATOM 58 NH2 ARG q 6 222.540 9.530 233.214 1.00 65.39 ATOM 59 N LYS q 7 221.654 6.543 229.563 1.00 65.09 ATOM 60 CA LYS q 7 221.086 7.286 228.445 1.00 65.34 ATOM 61 C LYS q 7 219.591 6.888 228.256 1.00 65.34 ATOM 62 O LYS q 7 218.714 7.661 228.643 1.00 65.14 ATOM 63 CB LYS q 7 221.893 7.045 227.163 1.00 65.91 ATOM 64 CG LYS q 7 222.126 8.300 226.295 1.00 66.25 ATOM 65 CD LYS q 7 223.306 8.174 225.288 1.00 66.88 ATOM 66 CE LYS q 7 223.895 9.550 224.867 1.00 67.22 ATOM 67 NZ LYS q 7 224.833 10.250 225.852 1.00 67.05 ATOM 68 N LYS q 8 219.301 5.695 227.724 1.00 65.64 ATOM 69 CA LYS q 8 217.924 5.248 227.511 1.00 65.81 ATOM 70 C LYS q 8 217.045 5.730 228.632 1.00 65.43 ATOM 71 O LYS q 8 216.159 6.532 228.437 1.00 65.51 ATOM 72 CB LYS q 8 217.840 3.714 227.408 1.00 66.07 ATOM 73 CG LYS q 8 216.625 3.207 226.569 1.00 66.61 ATOM 74 CD LYS q 8 216.652 1.730 226.157 1.00 67.04 ATOM 75 CE LYS q 8 217.618 1.401 224.985 1.00 67.46 ATOM 76 NZ LYS q 8 217.818 2.405 223.843 1.00 67.78 ATOM 77 N ARG q 9 217.381 5.314 229.835 1.00 65.62 ATOM 78 CA ARG q 9 216.516 5.527 231.002 1.00 65.34 ATOM 79 C ARG q 9 216.259 7.000 231.377 1.00 65.08 ATOM 80 O ARG q 9 215.269 7.315 232.048 1.00 65.00 ATOM 81 CB ARG q 9 217.110 4.781 232.210 1.00 65.10 ATOM 82 CG ARG q 9 216.303 4.799 233.504 1.00 64.93 ATOM 83 CD ARG q 9 217.224 5.110 234.663 1.00 64.59 ATOM 84 NE ARG q 9 216.990 4.281 235.841 1.00 64.63 ATOM 85 CZ ARG q 9 217.415 3.030 235.986 1.00 64.86 ATOM 86 NH1 ARG q 9 218.084 2.435 235.021 1.00 65.06 ATOM 87 NH2 ARG q 9 217.165 2.359 237.100 1.00 64.98 ATOM 88 N THR q 10 217.147 7.900 230.979 1.00 66.19 ATOM 89 CA THR q 10 216.878 9.300 231.228 1.00 66.03 ATOM 90 C THR q 10 215.963 9.750 230.153 1.00 66.43 ATOM 91 O THR q 10 214.935 10.347 230.434 1.00 66.45 ATOM 92 CB THR q 10 218.092 10.170 231.174 1.00 65.95 ATOM 93 OG1 THR q 10 218.568 10.175 229.833 1.00 66.36 ATOM 94 CG2 THR q 10 219.151 9.638 232.068 1.00 65.73 ATOM 95 N ARG q 11 216.341 9.458 228.912 1.00 66.43 ATOM 96 CA ARG q 11 215.489 9.749 227.767 1.00 66.98 ATOM 97 C ARG q 11 214.128 9.123 227.992 1.00 67.18 ATOM 98 O ARG q 11 213.121 9.625 227.512 1.00 67.60 ATOM 99 CB ARG q 11 216.090 9.216 226.465 1.00 67.47 ATOM 100 CG ARG q 11 217.144 10.094 225.837 1.00 67.63 ATOM 101 CD ARG q 11 217.773 9.462 224.581 1.00 68.20 ATOM 102 NE ARG q 11 218.342 10.529 223.749 1.00 68.63 ATOM 103 CZ ARG q 11 219.294 10.407 222.819 1.00 69.12 ATOM 104 NH1 ARG q 11 219.873 9.220 222.549 1.00 69.24 ATOM 105 NH2 ARG q 11 219.661 11.512 222.156 1.00 69.58 ATOM 106 N ARG q 12 214.115 8.007 228.716 1.00 66.86 ATOM 107 CA ARG q 12 212.880 7.346 229.107 1.00 67.10 ATOM 108 C ARG q 12 212.050 8.240 230.001 1.00 66.93 ATOM 109 O ARG q 12 210.843 8.300 229.894 1.00 67.38 ATOM 110 CB ARG q 12 213.199 6.047 229.843 1.00 66.93 ATOM 111 CG ARG q 12 213.649 4.877 228.960 1.00 67.29 ATOM 112 CD ARG q 12 212.758 3.643 229.160 1.00 67.71 ATOM 113 NE ARG q 12 213.189 2.520 228.363 1.00 68.08 ATOM 114 CZ ARG q 12 213.922 1.533 228.846 1.00 67.93 ATOM 115 NH1 ARG q 12 214.293 1.517 230.131 1.00 67.44 ATOM 116 NH2 ARG q 12 214.279 0.558 228.037 1.00 68.34 ATOM 117 N LEU q 13 212.737 8.912 230.909 1.00 69.36 ATOM 118 CA LEU q 13 212.110 9.802 231.855 1.00 69.11 ATOM 119 C LEU q 13 211.624 10.991 231.119 1.00 70.25 ATOM 120 O LEU q 13 210.448 11.056 230.815 1.00 71.29 ATOM 121 CB LEU q 13 213.089 10.226 232.966 1.00 67.97 ATOM 122 CG LEU q 13 212.573 9.868 234.380 1.00 67.39 ATOM 123 CD1 LEU q 13 213.697 9.447 235.371 1.00 66.79 ATOM 124 CD2 LEU q 13 211.630 10.958 234.976 1.00 67.63 ATOM 125 N LYS q 14 212.553 11.923 230.888 1.00 69.40 ATOM 126 CA LYS q 14 212.410 13.101 230.043 1.00 69.72 ATOM 127 C LYS q 14 211.080 13.112 229.312 1.00 70.41 ATOM 128 O LYS q 14 210.264 14.016 229.470 1.00 70.67 ATOM 129 CB LYS q 14 213.560 13.133 229.038 1.00 69.84 ATOM 130 CG LYS q 14 214.338 14.451 228.878 1.00 69.80 ATOM 131 CD LYS q 14 215.665 14.215 228.086 1.00 69.93 ATOM 132 CE LYS q 14 216.103 15.401 227.182 1.00 70.40 ATOM 133 NZ LYS q 14 216.365 15.079 225.679 1.00 71.09 ATOM 134 N ARG q 15 210.851 12.054 228.550 1.00 70.43 ATOM 135 CA ARG q 15 209.608 11.865 227.810 1.00 72.40 ATOM 136 C ARG q 15 208.396 11.559 228.665 1.00 72.38 ATOM 137 O ARG q 15 207.302 12.025 228.368 1.00 74.09 ATOM 138 CB ARG q 15 209.770 10.741 226.801 1.00 73.07 ATOM 139 CG ARG q 15 210.925 10.958 225.856 1.00 73.32 ATOM 140 CD ARG q 15 210.519 10.548 224.479 1.00 75.32 ATOM 141 NE ARG q 15 209.880 9.251 224.528 1.00 75.14 ATOM 142 CZ ARG q 15 210.547 8.141 224.293 1.00 74.15 ATOM 143 NH1 ARG q 15 211.826 8.252 223.992 1.00 73.34 ATOM 144 NH2 ARG q 15 209.957 6.948 224.345 1.00 74.03 ATOM 145 N LYS q 16 208.567 10.765 229.716 1.00 73.73 ATOM 146 CA LYS q 16 207.430 10.444 230.549 1.00 73.68 ATOM 147 C LYS q 16 207.245 11.574 231.510 1.00 73.43 ATOM 148 O LYS q 16 206.468 11.466 232.448 1.00 73.59 ATOM 149 CB LYS q 16 207.604 9.129 231.290 1.00 72.24 ATOM 150 CG LYS q 16 206.347 8.218 231.206 1.00 72.85 ATOM 151 CD LYS q 16 206.096 7.379 232.514 1.00 71.54 ATOM 152 CE LYS q 16 205.867 8.251 233.838 1.00 70.64 ATOM 153 NZ LYS q 16 206.391 7.704 235.192 1.00 69.21 ATOM 154 N ARG q 17 207.958 12.668 231.249 1.00 73.17 ATOM 155 CA ARG q 17 207.880 13.887 232.042 1.00 72.87 ATOM 156 C ARG q 17 207.305 15.015 231.242 1.00 74.50 ATOM 157 O ARG q 17 206.458 15.764 231.729 1.00 74.97 ATOM 158 CB ARG q 17 209.246 14.277 232.568 1.00 71.44 ATOM 159 CG ARG q 17 209.498 13.712 233.931 1.00 70.09 ATOM 160 CD ARG q 17 209.959 14.780 234.834 1.00 69.27 ATOM 161 NE ARG q 17 211.316 15.107 234.479 1.00 68.74 ATOM 162 CZ ARG q 17 212.353 14.612 235.116 1.00 67.84 ATOM 163 NH1 ARG q 17 212.109 13.811 236.142 1.00 67.42 ATOM 164 NH2 ARG q 17 213.597 14.927 234.745 1.00 67.55 ATOM 165 N ARG q 18 207.792 15.144 230.015 1.00 73.18 ATOM 166 CA ARG q 18 207.142 15.960 229.014 1.00 75.58 ATOM 167 C ARG q 18 205.671 15.731 229.094 1.00 76.88 ATOM 168 O ARG q 18 204.858 16.649 229.030 1.00 78.23 ATOM 169 CB ARG q 18 207.587 15.557 227.644 1.00 76.97 ATOM 170 CG ARG q 18 208.517 16.453 226.947 1.00 76.86 ATOM 171 CD ARG q 18 208.577 15.927 225.502 1.00 78.77 ATOM 172 NE ARG q 18 207.214 15.696 225.022 1.00 81.48 ATOM 173 CZ ARG q 18 206.409 16.658 224.551 1.00 83.99 ATOM 174 NH1 ARG q 18 205.167 16.346 224.155 1.00 86.58 ATOM 175 NH2 ARG q 18 206.839 17.933 224.468 1.00 84.05 ATOM 176 N LYS q 19 205.357 14.454 229.249 1.00 76.76 ATOM 177 CA LYS q 19 204.031 13.932 229.026 1.00 78.24 ATOM 178 C LYS q 19 203.072 14.207 230.176 1.00 77.86 ATOM 179 O LYS q 19 201.857 14.034 230.036 1.00 79.63 ATOM 180 CB LYS q 19 204.132 12.432 228.757 1.00 77.68 ATOM 181 CG LYS q 19 203.436 11.963 227.460 1.00 80.10 ATOM 182 CD LYS q 19 204.128 10.730 226.800 1.00 80.35 ATOM 183 CE LYS q 19 203.120 9.615 226.316 1.00 82.31 ATOM 184 NZ LYS q 19 203.221 8.241 226.977 1.00 80.81 ATOM 185 N VAL q 20 203.610 14.640 231.311 1.00 77.15 ATOM 186 CA VAL q 20 202.758 15.049 232.422 1.00 76.83 ATOM 187 C VAL q 20 202.272 16.436 232.191 1.00 78.05 ATOM 188 O VAL q 20 201.087 16.663 232.022 1.00 79.52 ATOM 189 CB VAL q 20 203.476 15.047 233.737 1.00 74.77 ATOM 190 CG1 VAL q 20 202.482 14.789 234.837 1.00 74.56 ATOM 191 CG2 VAL q 20 204.580 14.003 233.722 1.00 73.47 ATOM 192 N ARG q 21 203.220 17.358 232.205 1.00 73.32 ATOM 193 CA ARG q 21 203.028 18.704 231.722 1.00 74.78 ATOM 194 C ARG q 21 202.037 18.745 230.548 1.00 77.70 ATOM 195 O ARG q 21 201.185 19.628 230.445 1.00 79.32 ATOM 196 CB ARG q 21 204.383 19.262 231.310 1.00 74.08 ATOM 197 CG ARG q 21 204.495 20.782 231.284 1.00 75.29 ATOM 198 CD ARG q 21 205.816 21.180 231.883 1.00 73.44 ATOM 199 NE ARG q 21 206.693 22.026 231.075 1.00 73.90 ATOM 200 CZ ARG q 21 206.570 23.338 231.022 1.00 74.71 ATOM 201 NH1 ARG q 21 205.578 23.902 231.678 1.00 75.25 ATOM 202 NH2 ARG q 21 207.407 24.080 230.327 1.00 75.02 ATOM 203 N ALA q 22 202.147 17.767 229.667 1.00 78.58 ATOM 204 CA ALA q 22 201.152 17.559 228.619 1.00 81.47 ATOM 205 C ALA q 22 199.679 17.517 229.114 1.00 82.39 ATOM 206 O ALA q 22 198.734 17.838 228.382 1.00 84.93 ATOM 207 CB ALA q 22 201.492 16.252 227.856 1.00 81.94 ATOM 208 N ARG q 23 199.490 17.096 230.350 1.00 84.04 ATOM 209 CA ARG q 23 198.163 17.085 230.906 1.00 84.69 ATOM 210 C ARG q 23 197.800 18.482 231.448 1.00 85.00 ATOM 211 O ARG q 23 196.752 18.697 232.086 1.00 85.53 ATOM 212 CB ARG q 23 198.051 16.026 231.999 1.00 82.67 ATOM 213 CG ARG q 23 196.603 15.661 232.324 1.00 83.84 ATOM 214 CD ARG q 23 196.555 14.228 232.659 1.00 82.76 ATOM 215 NE ARG q 23 197.756 13.966 233.425 1.00 79.97 ATOM 216 CZ ARG q 23 197.727 13.707 234.718 1.00 78.74 ATOM 217 NH1 ARG q 23 196.547 13.644 235.332 1.00 80.01 ATOM 218 NH2 ARG q 23 198.863 13.487 235.383 1.00 76.41 ATOM 219 N SER q 24 198.654 19.457 231.216 1.00 82.47 ATOM 220 CA SER q 24 198.199 20.779 231.517 1.00 83.21 ATOM 221 C SER q 24 197.433 21.118 230.294 1.00 86.25 ATOM 222 O SER q 24 196.269 21.506 230.377 1.00 87.86 ATOM 223 CB SER q 24 199.348 21.715 231.763 1.00 81.63 ATOM 224 OG SER q 24 200.301 21.005 232.520 1.00 79.12 ATOM 225 N LYS q 25 198.104 20.842 229.171 1.00 83.50 ATOM 226 CA LYS q 25 197.717 21.170 227.787 1.00 86.44 ATOM 227 C LYS q 25 198.474 22.422 227.345 1.00 86.50 ATOM 228 O LYS q 25 199.622 22.619 227.726 1.00 84.25 ATOM 229 CB LYS q 25 196.198 21.377 227.615 1.00 88.99 ATOM 230 CG LYS q 25 195.395 20.140 227.294 1.00 89.52 ATOM 231 CD LYS q 25 194.461 20.404 226.117 1.00 92.29 ATOM 232 CE LYS q 25 193.207 21.218 226.506 1.00 94.12 ATOM 233 NZ LYS q 25 192.959 22.462 225.693 1.00 96.05 TER