HEADER ribosome 24-JUL-14 4U4Y TITLE Crystal structure of Pactamycin bound to the yeast 80S ribosome COMPND MOL_ID: 77; COMPND 2 MOLECULE: 60S ribosomal protein L41-A; COMPND 3 CHAIN: Q1, q1; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.20 ANGSTORMS DBREF 4U4Y Q 1 25 UNP P0CX86 RL41A_YEAST 1 25 SEQRES 1 Q1 25 MET ARG ALA LYS TRP ARG LYS LYS ARG THR ARG ARG LEU SEQRES 2 Q1 25 LYS ARG LYS ARG ARG LYS VAL ARG ALA ARG SER LYS ATOM 1 N MET Q 1 -48.224 -4.410 78.961 1.00 62.72 ATOM 2 CA MET Q 1 -47.379 -4.868 80.054 1.00 60.84 ATOM 3 C MET Q 1 -47.897 -4.296 81.345 1.00 60.38 ATOM 4 O MET Q 1 -48.555 -3.270 81.324 1.00 60.95 ATOM 5 CB MET Q 1 -45.942 -4.454 79.818 1.00 58.74 ATOM 6 CG MET Q 1 -45.778 -3.055 79.287 1.00 58.06 ATOM 7 SD MET Q 1 -44.160 -2.391 79.748 1.00 55.44 ATOM 8 CE MET Q 1 -43.234 -3.907 80.003 1.00 55.14 ATOM 9 N ARG Q 2 -47.614 -4.961 82.458 1.00 59.65 ATOM 10 CA ARG Q 2 -48.087 -4.498 83.757 1.00 59.42 ATOM 11 C ARG Q 2 -47.818 -3.025 83.862 1.00 58.52 ATOM 12 O ARG Q 2 -46.717 -2.566 83.556 1.00 57.06 ATOM 13 CB ARG Q 2 -47.413 -5.247 84.914 1.00 58.37 ATOM 14 CG ARG Q 2 -47.797 -4.769 86.312 1.00 58.21 ATOM 15 CD ARG Q 2 -48.566 -5.819 87.084 1.00 59.31 ATOM 16 NE ARG Q 2 -47.733 -6.743 87.855 1.00 58.52 ATOM 17 CZ ARG Q 2 -47.550 -6.671 89.179 1.00 58.07 ATOM 18 NH1 ARG Q 2 -48.122 -5.701 89.887 1.00 58.31 ATOM 19 NH2 ARG Q 2 -46.791 -7.566 89.807 1.00 57.69 ATOM 20 N ALA Q 3 -48.852 -2.283 84.224 1.00 59.75 ATOM 21 CA ALA Q 3 -48.735 -0.855 84.396 1.00 59.46 ATOM 22 C ALA Q 3 -47.479 -0.546 85.205 1.00 57.52 ATOM 23 O ALA Q 3 -46.663 0.271 84.781 1.00 56.59 ATOM 24 CB ALA Q 3 -49.979 -0.304 85.073 1.00 61.31 ATOM 25 N LYS Q 4 -47.294 -1.237 86.331 1.00 57.13 ATOM 26 CA LYS Q 4 -46.127 -1.000 87.188 1.00 55.79 ATOM 27 C LYS Q 4 -44.773 -1.298 86.521 1.00 54.37 ATOM 28 O LYS Q 4 -43.763 -0.752 86.921 1.00 53.55 ATOM 29 CB LYS Q 4 -46.245 -1.821 88.479 1.00 55.97 ATOM 30 CG LYS Q 4 -45.444 -3.118 88.469 1.00 55.23 ATOM 31 CD LYS Q 4 -44.835 -3.402 89.806 1.00 54.97 ATOM 32 CE LYS Q 4 -45.887 -3.478 90.855 1.00 56.04 ATOM 33 NZ LYS Q 4 -45.231 -3.383 92.179 1.00 55.98 ATOM 34 N TRP Q 5 -44.755 -2.170 85.522 1.00 55.01 ATOM 35 CA TRP Q 5 -43.517 -2.520 84.840 1.00 54.75 ATOM 36 C TRP Q 5 -43.170 -1.450 83.822 1.00 54.07 ATOM 37 O TRP Q 5 -41.994 -1.176 83.547 1.00 53.12 ATOM 38 CB TRP Q 5 -43.613 -3.865 84.118 1.00 56.79 ATOM 39 CG TRP Q 5 -43.787 -5.124 84.954 1.00 57.90 ATOM 40 CD1 TRP Q 5 -44.387 -6.287 84.541 1.00 60.47 ATOM 41 CD2 TRP Q 5 -43.339 -5.368 86.299 1.00 56.87 ATOM 42 NE1 TRP Q 5 -44.354 -7.221 85.540 1.00 60.91 ATOM 43 CE2 TRP Q 5 -43.711 -6.689 86.627 1.00 58.64 ATOM 44 CE3 TRP Q 5 -42.681 -4.604 87.258 1.00 55.08 ATOM 45 CZ2 TRP Q 5 -43.434 -7.258 87.870 1.00 58.30 ATOM 46 CZ3 TRP Q 5 -42.411 -5.180 88.491 1.00 55.10 ATOM 47 CH2 TRP Q 5 -42.795 -6.487 88.787 1.00 56.51 ATOM 48 N ARG Q 6 -44.199 -0.861 83.233 1.00 57.51 ATOM 49 CA ARG Q 6 -43.950 0.240 82.345 1.00 57.02 ATOM 50 C ARG Q 6 -43.468 1.436 83.166 1.00 55.55 ATOM 51 O ARG Q 6 -42.622 2.207 82.709 1.00 54.68 ATOM 52 CB ARG Q 6 -45.186 0.586 81.533 1.00 58.53 ATOM 53 CG ARG Q 6 -44.970 1.821 80.712 1.00 58.01 ATOM 54 CD ARG Q 6 -45.421 1.643 79.305 1.00 59.71 ATOM 55 NE ARG Q 6 -46.559 2.514 79.010 1.00 60.53 ATOM 56 CZ ARG Q 6 -46.464 3.779 78.563 1.00 60.12 ATOM 57 NH1 ARG Q 6 -45.253 4.357 78.365 1.00 58.88 ATOM 58 NH2 ARG Q 6 -47.593 4.476 78.308 1.00 61.10 ATOM 59 N LYS Q 7 -43.980 1.590 84.382 1.00 53.73 ATOM 60 CA LYS Q 7 -43.457 2.621 85.262 1.00 53.62 ATOM 61 C LYS Q 7 -41.956 2.399 85.484 1.00 52.34 ATOM 62 O LYS Q 7 -41.167 3.339 85.456 1.00 52.08 ATOM 63 CB LYS Q 7 -44.198 2.609 86.567 1.00 54.65 ATOM 64 CG LYS Q 7 -43.815 3.689 87.518 1.00 55.16 ATOM 65 CD LYS Q 7 -44.461 3.361 88.850 1.00 56.16 ATOM 66 CE LYS Q 7 -44.245 4.400 89.883 1.00 57.28 ATOM 67 NZ LYS Q 7 -45.562 4.728 90.418 1.00 59.10 ATOM 68 N LYS Q 8 -41.552 1.144 85.663 1.00 53.42 ATOM 69 CA LYS Q 8 -40.132 0.806 85.790 1.00 52.62 ATOM 70 C LYS Q 8 -39.402 0.980 84.461 1.00 51.89 ATOM 71 O LYS Q 8 -38.194 1.229 84.429 1.00 51.42 ATOM 72 CB LYS Q 8 -39.958 -0.625 86.285 1.00 52.68 ATOM 73 CG LYS Q 8 -38.559 -0.948 86.676 1.00 52.42 ATOM 74 CD LYS Q 8 -38.348 -2.428 86.695 1.00 52.67 ATOM 75 CE LYS Q 8 -38.895 -3.054 87.953 1.00 53.35 ATOM 76 NZ LYS Q 8 -37.832 -3.585 88.856 1.00 53.84 ATOM 77 N ARG Q 9 -40.132 0.824 83.360 1.00 52.50 ATOM 78 CA ARG Q 9 -39.504 0.958 82.060 1.00 52.19 ATOM 79 C ARG Q 9 -39.013 2.356 81.927 1.00 51.40 ATOM 80 O ARG Q 9 -37.864 2.576 81.519 1.00 50.80 ATOM 81 CB ARG Q 9 -40.448 0.651 80.907 1.00 53.25 ATOM 82 CG ARG Q 9 -39.902 -0.412 79.974 1.00 54.18 ATOM 83 CD ARG Q 9 -39.950 0.017 78.507 1.00 54.71 ATOM 84 NE ARG Q 9 -40.891 -0.737 77.667 1.00 57.09 ATOM 85 CZ ARG Q 9 -40.844 -2.039 77.444 1.00 59.01 ATOM 86 NH1 ARG Q 9 -39.926 -2.789 78.012 1.00 58.74 ATOM 87 NH2 ARG Q 9 -41.736 -2.594 76.666 1.00 61.46 ATOM 88 N THR Q 10 -39.871 3.312 82.278 1.00 52.83 ATOM 89 CA THR Q 10 -39.496 4.692 82.024 1.00 52.49 ATOM 90 C THR Q 10 -38.579 5.211 83.131 1.00 52.59 ATOM 91 O THR Q 10 -37.645 5.975 82.851 1.00 52.45 ATOM 92 CB THR Q 10 -40.720 5.612 81.842 1.00 53.20 ATOM 93 OG1 THR Q 10 -40.975 6.337 83.049 1.00 53.82 ATOM 94 CG2 THR Q 10 -41.950 4.808 81.401 1.00 54.05 ATOM 95 N ARG Q 11 -38.800 4.771 84.366 1.00 51.85 ATOM 96 CA ARG Q 11 -37.856 5.100 85.429 1.00 52.60 ATOM 97 C ARG Q 11 -36.433 4.897 84.900 1.00 52.18 ATOM 98 O ARG Q 11 -35.627 5.821 84.900 1.00 52.76 ATOM 99 CB ARG Q 11 -38.101 4.248 86.682 1.00 53.26 ATOM 100 CG ARG Q 11 -38.532 5.007 87.931 1.00 54.76 ATOM 101 CD ARG Q 11 -39.913 5.605 87.763 1.00 54.88 ATOM 102 NE ARG Q 11 -40.497 6.081 89.024 1.00 56.37 ATOM 103 CZ ARG Q 11 -40.967 5.284 89.989 1.00 56.82 ATOM 104 NH1 ARG Q 11 -40.901 3.969 89.834 1.00 55.92 ATOM 105 NH2 ARG Q 11 -41.500 5.787 91.104 1.00 58.27 ATOM 106 N ARG Q 12 -36.163 3.706 84.382 1.00 52.66 ATOM 107 CA ARG Q 12 -34.863 3.399 83.804 1.00 52.39 ATOM 108 C ARG Q 12 -34.533 4.331 82.655 1.00 51.77 ATOM 109 O ARG Q 12 -33.426 4.850 82.581 1.00 52.02 ATOM 110 CB ARG Q 12 -34.811 1.963 83.288 1.00 52.23 ATOM 111 CG ARG Q 12 -34.805 0.867 84.302 1.00 53.01 ATOM 112 CD ARG Q 12 -35.025 -0.388 83.530 1.00 53.34 ATOM 113 NE ARG Q 12 -35.210 -1.565 84.356 1.00 54.30 ATOM 114 CZ ARG Q 12 -35.791 -2.676 83.920 1.00 55.13 ATOM 115 NH1 ARG Q 12 -36.256 -2.731 82.679 1.00 55.39 ATOM 116 NH2 ARG Q 12 -35.922 -3.722 84.721 1.00 56.13 ATOM 117 N LEU Q 13 -35.487 4.502 81.744 1.00 52.85 ATOM 118 CA LEU Q 13 -35.269 5.298 80.542 1.00 52.27 ATOM 119 C LEU Q 13 -34.791 6.673 80.958 1.00 52.74 ATOM 120 O LEU Q 13 -33.795 7.187 80.445 1.00 52.65 ATOM 121 CB LEU Q 13 -36.554 5.399 79.717 1.00 52.22 ATOM 122 CG LEU Q 13 -36.549 5.756 78.222 1.00 51.97 ATOM 123 CD1 LEU Q 13 -35.683 6.924 77.914 1.00 51.49 ATOM 124 CD2 LEU Q 13 -36.173 4.577 77.311 1.00 52.23 ATOM 125 N LYS Q 14 -35.504 7.242 81.919 1.00 52.53 ATOM 126 CA LYS Q 14 -35.201 8.566 82.415 1.00 53.70 ATOM 127 C LYS Q 14 -33.756 8.619 82.907 1.00 54.55 ATOM 128 O LYS Q 14 -33.054 9.592 82.648 1.00 55.20 ATOM 129 CB LYS Q 14 -36.183 8.965 83.535 1.00 54.90 ATOM 130 CG LYS Q 14 -37.612 9.305 83.072 1.00 54.65 ATOM 131 CD LYS Q 14 -38.451 10.053 84.139 1.00 56.09 ATOM 132 CE LYS Q 14 -38.538 9.262 85.461 1.00 56.77 ATOM 133 NZ LYS Q 14 -39.895 9.242 86.181 1.00 57.39 ATOM 134 N ARG Q 15 -33.312 7.557 83.588 1.00 54.27 ATOM 135 CA ARG Q 15 -32.017 7.545 84.270 1.00 55.50 ATOM 136 C ARG Q 15 -30.848 7.535 83.273 1.00 54.85 ATOM 137 O ARG Q 15 -29.784 8.089 83.555 1.00 56.02 ATOM 138 CB ARG Q 15 -31.927 6.343 85.218 1.00 55.80 ATOM 139 CG ARG Q 15 -30.865 6.472 86.352 1.00 57.58 ATOM 140 CD ARG Q 15 -30.358 5.096 86.904 1.00 57.76 ATOM 141 NE ARG Q 15 -31.296 4.024 86.564 1.00 56.37 ATOM 142 CZ ARG Q 15 -32.347 3.672 87.306 1.00 56.51 ATOM 143 NH1 ARG Q 15 -32.579 4.293 88.462 1.00 57.98 ATOM 144 NH2 ARG Q 15 -33.161 2.692 86.893 1.00 55.42 ATOM 145 N LYS Q 16 -31.061 6.921 82.110 1.00 54.60 ATOM 146 CA LYS Q 16 -30.058 6.851 81.048 1.00 53.96 ATOM 147 C LYS Q 16 -29.941 8.184 80.308 1.00 53.99 ATOM 148 O LYS Q 16 -28.832 8.661 80.019 1.00 54.49 ATOM 149 CB LYS Q 16 -30.415 5.739 80.065 1.00 52.66 ATOM 150 CG LYS Q 16 -29.223 5.018 79.471 1.00 52.65 ATOM 151 CD LYS Q 16 -29.616 3.607 79.006 1.00 52.52 ATOM 152 CE LYS Q 16 -28.883 2.490 79.795 1.00 53.44 ATOM 153 NZ LYS Q 16 -27.361 2.474 79.597 1.00 53.93 ATOM 154 N ARG Q 17 -31.094 8.779 79.994 1.00 53.89 ATOM 155 CA ARG Q 17 -31.100 10.067 79.326 1.00 54.05 ATOM 156 C ARG Q 17 -30.444 11.018 80.260 1.00 56.06 ATOM 157 O ARG Q 17 -29.673 11.856 79.841 1.00 56.66 ATOM 158 CB ARG Q 17 -32.505 10.544 78.978 1.00 53.59 ATOM 159 CG ARG Q 17 -33.344 9.483 78.293 1.00 52.25 ATOM 160 CD ARG Q 17 -34.432 10.036 77.383 1.00 51.90 ATOM 161 NE ARG Q 17 -35.725 10.080 78.046 1.00 52.50 ATOM 162 CZ ARG Q 17 -36.889 9.949 77.424 1.00 52.59 ATOM 163 NH1 ARG Q 17 -36.936 9.732 76.107 1.00 52.27 ATOM 164 NH2 ARG Q 17 -38.012 10.022 78.125 1.00 53.40 ATOM 165 N ARG Q 18 -30.734 10.862 81.541 1.00 52.76 ATOM 166 CA ARG Q 18 -30.102 11.682 82.549 1.00 55.03 ATOM 167 C ARG Q 18 -28.593 11.537 82.396 1.00 55.40 ATOM 168 O ARG Q 18 -27.879 12.541 82.319 1.00 56.64 ATOM 169 CB ARG Q 18 -30.564 11.290 83.953 1.00 56.15 ATOM 170 CG ARG Q 18 -30.720 12.462 84.896 1.00 58.47 ATOM 171 CD ARG Q 18 -30.984 11.975 86.288 1.00 59.60 ATOM 172 NE ARG Q 18 -32.281 11.299 86.385 1.00 58.48 ATOM 173 CZ ARG Q 18 -32.681 10.536 87.421 1.00 58.87 ATOM 174 NH1 ARG Q 18 -31.877 10.314 88.477 1.00 60.37 ATOM 175 NH2 ARG Q 18 -33.902 9.977 87.401 1.00 57.77 ATOM 176 N LYS Q 19 -28.118 10.292 82.292 1.00 54.27 ATOM 177 CA LYS Q 19 -26.688 10.028 82.148 1.00 54.52 ATOM 178 C LYS Q 19 -26.120 10.658 80.893 1.00 53.96 ATOM 179 O LYS Q 19 -25.110 11.353 80.942 1.00 55.16 ATOM 180 CB LYS Q 19 -26.398 8.531 82.130 1.00 53.74 ATOM 181 CG LYS Q 19 -25.820 7.993 83.422 1.00 55.45 ATOM 182 CD LYS Q 19 -26.919 7.392 84.301 1.00 55.24 ATOM 183 CE LYS Q 19 -26.465 7.193 85.749 1.00 57.34 ATOM 184 NZ LYS Q 19 -25.043 6.711 85.958 1.00 58.95 ATOM 185 N VAL Q 20 -26.771 10.416 79.766 1.00 53.00 ATOM 186 CA VAL Q 20 -26.256 10.909 78.509 1.00 52.39 ATOM 187 C VAL Q 20 -26.225 12.426 78.501 1.00 53.29 ATOM 188 O VAL Q 20 -25.363 13.033 77.887 1.00 53.59 ATOM 189 CB VAL Q 20 -27.077 10.365 77.336 1.00 50.77 ATOM 190 CG1 VAL Q 20 -27.362 11.437 76.302 1.00 50.40 ATOM 191 CG2 VAL Q 20 -26.368 9.172 76.709 1.00 50.30 ATOM 192 N ARG Q 21 -27.127 13.064 79.218 1.00 51.85 ATOM 193 CA ARG Q 21 -27.108 14.511 79.174 1.00 53.07 ATOM 194 C ARG Q 21 -25.976 15.058 80.019 1.00 55.15 ATOM 195 O ARG Q 21 -25.428 16.115 79.711 1.00 56.22 ATOM 196 CB ARG Q 21 -28.432 15.095 79.623 1.00 53.68 ATOM 197 CG ARG Q 21 -29.098 15.894 78.529 1.00 53.28 ATOM 198 CD ARG Q 21 -30.375 16.534 79.014 1.00 54.46 ATOM 199 NE ARG Q 21 -30.235 17.967 78.948 1.00 56.27 ATOM 200 CZ ARG Q 21 -30.924 18.806 79.690 1.00 58.38 ATOM 201 NH1 ARG Q 21 -30.706 20.105 79.578 1.00 60.30 ATOM 202 NH2 ARG Q 21 -31.824 18.339 80.531 1.00 58.75 ATOM 203 N ALA Q 22 -25.609 14.327 81.066 1.00 55.98 ATOM 204 CA ALA Q 22 -24.518 14.749 81.921 1.00 58.41 ATOM 205 C ALA Q 22 -23.180 14.774 81.188 1.00 58.61 ATOM 206 O ALA Q 22 -22.291 15.517 81.575 1.00 60.85 ATOM 207 CB ALA Q 22 -24.434 13.854 83.124 1.00 59.33 ATOM 208 N ARG Q 23 -23.032 13.966 80.136 1.00 59.15 ATOM 209 CA ARG Q 23 -21.786 13.914 79.365 1.00 58.83 ATOM 210 C ARG Q 23 -21.548 15.252 78.691 1.00 59.60 ATOM 211 O ARG Q 23 -20.460 15.537 78.195 1.00 59.80 ATOM 212 CB ARG Q 23 -21.818 12.811 78.302 1.00 56.67 ATOM 213 CG ARG Q 23 -22.469 11.522 78.735 1.00 55.49 ATOM 214 CD ARG Q 23 -22.412 10.442 77.640 1.00 53.65 ATOM 215 NE ARG Q 23 -21.078 9.863 77.509 1.00 54.07 ATOM 216 CZ ARG Q 23 -20.317 9.995 76.425 1.00 53.92 ATOM 217 NH1 ARG Q 23 -19.089 9.457 76.370 1.00 55.38 ATOM 218 NH2 ARG Q 23 -20.807 10.670 75.386 1.00 52.56 ATOM 219 N SER Q 24 -22.577 16.080 78.663 1.00 60.75 ATOM 220 CA SER Q 24 -22.459 17.353 77.994 1.00 61.36 ATOM 221 C SER Q 24 -22.373 18.544 78.965 1.00 63.78 ATOM 222 O SER Q 24 -21.937 19.621 78.581 1.00 64.83 ATOM 223 CB SER Q 24 -23.637 17.520 77.039 1.00 59.76 ATOM 224 OG SER Q 24 -23.357 18.519 76.075 1.00 59.85 ATOM 225 N LYS Q 25 -22.767 18.318 80.217 1.00 62.08 ATOM 226 CA LYS Q 25 -23.001 19.369 81.220 1.00 64.55 ATOM 227 C LYS Q 25 -22.287 20.708 80.989 1.00 66.86 ATOM 228 O LYS Q 25 -21.088 20.843 81.230 1.00 68.71 ATOM 229 CB LYS Q 25 -22.624 18.849 82.607 1.00 66.53 ATOM 230 CG LYS Q 25 -23.834 18.570 83.475 1.00 66.49 ATOM 231 CD LYS Q 25 -23.488 18.516 84.965 1.00 69.49 ATOM 232 CE LYS Q 25 -22.655 17.290 85.325 1.00 69.24 ATOM 233 NZ LYS Q 25 -22.182 17.380 86.745 1.00 72.78 TER