HEADER ribosome 24-JUL-14 4U4Z TITLE Crystal structure of Phyllanthoside bound to the yeast 80S ribosome COMPND MOL_ID: 77; COMPND 2 MOLECULE: 60S ribosomal protein L41-A; COMPND 3 CHAIN: Q1, q1; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.10 ANGSTORMS DBREF 4U4Z q 1 25 UNP P0CX86 RL41A_YEAST 1 25 SEQRES 1 q1 25 MET ARG ALA LYS TRP ARG LYS LYS ARG THR ARG ARG LEU SEQRES 2 q1 25 LYS ARG LYS ARG ARG LYS VAL ARG ALA ARG SER LYS ATOM 1 N MET q 1 226.223 1.119 235.573 1.00 53.50 ATOM 2 CA MET q 1 225.782 0.582 234.297 1.00 50.85 ATOM 3 C MET q 1 226.588 1.186 233.143 1.00 48.60 ATOM 4 O MET q 1 227.147 2.287 233.277 1.00 48.44 ATOM 5 CB MET q 1 224.303 0.844 234.115 1.00 48.37 ATOM 6 CG MET q 1 223.951 2.293 233.910 1.00 45.75 ATOM 7 SD MET q 1 222.177 2.520 233.604 1.00 42.98 ATOM 8 CE MET q 1 221.895 1.235 232.431 1.00 41.86 ATOM 9 N ARG q 2 226.660 0.456 232.026 1.00 50.38 ATOM 10 CA ARG q 2 227.442 0.887 230.858 1.00 48.31 ATOM 11 C ARG q 2 226.989 2.267 230.379 1.00 45.72 ATOM 12 O ARG q 2 225.800 2.574 230.426 1.00 44.06 ATOM 13 CB ARG q 2 227.337 -0.129 229.714 1.00 47.09 ATOM 14 CG ARG q 2 227.366 0.509 228.326 1.00 44.77 ATOM 15 CD ARG q 2 228.326 -0.140 227.356 1.00 45.38 ATOM 16 NE ARG q 2 227.826 -1.381 226.773 1.00 44.55 ATOM 17 CZ ARG q 2 227.979 -1.708 225.495 1.00 43.88 ATOM 18 NH1 ARG q 2 228.588 -0.886 224.665 1.00 44.32 ATOM 19 NH2 ARG q 2 227.504 -2.847 225.040 1.00 43.25 ATOM 20 N ALA q 3 227.940 3.096 229.950 1.00 47.30 ATOM 21 CA ALA q 3 227.667 4.450 229.502 1.00 45.44 ATOM 22 C ALA q 3 226.531 4.434 228.532 1.00 43.50 ATOM 23 O ALA q 3 225.463 4.976 228.803 1.00 42.50 ATOM 24 CB ALA q 3 228.858 5.038 228.862 1.00 47.81 ATOM 25 N LYS q 4 226.768 3.789 227.397 1.00 44.71 ATOM 26 CA LYS q 4 225.749 3.611 226.367 1.00 43.99 ATOM 27 C LYS q 4 224.335 3.329 226.929 1.00 43.33 ATOM 28 O LYS q 4 223.383 3.996 226.554 1.00 43.41 ATOM 29 CB LYS q 4 226.192 2.495 225.428 1.00 44.16 ATOM 30 CG LYS q 4 225.330 2.356 224.218 1.00 44.62 ATOM 31 CD LYS q 4 225.825 1.240 223.348 1.00 44.82 ATOM 32 CE LYS q 4 226.317 1.791 222.043 1.00 46.38 ATOM 33 NZ LYS q 4 226.295 0.672 221.094 1.00 46.73 ATOM 34 N TRP q 5 224.207 2.385 227.854 1.00 45.64 ATOM 35 CA TRP q 5 222.908 2.063 228.415 1.00 45.25 ATOM 36 C TRP q 5 222.381 3.135 229.363 1.00 45.12 ATOM 37 O TRP q 5 221.169 3.320 229.471 1.00 44.50 ATOM 38 CB TRP q 5 222.971 0.734 229.121 1.00 46.60 ATOM 39 CG TRP q 5 223.455 -0.403 228.273 1.00 46.70 ATOM 40 CD1 TRP q 5 224.039 -1.556 228.727 1.00 48.71 ATOM 41 CD2 TRP q 5 223.399 -0.529 226.837 1.00 45.56 ATOM 42 NE1 TRP q 5 224.356 -2.389 227.667 1.00 47.93 ATOM 43 CE2 TRP q 5 223.963 -1.785 226.503 1.00 46.03 ATOM 44 CE3 TRP q 5 222.932 0.291 225.798 1.00 45.21 ATOM 45 CZ2 TRP q 5 224.078 -2.227 225.183 1.00 45.56 ATOM 46 CZ3 TRP q 5 223.046 -0.166 224.479 1.00 45.84 ATOM 47 CH2 TRP q 5 223.629 -1.401 224.189 1.00 45.71 ATOM 48 N ARG q 6 223.281 3.843 230.041 1.00 47.08 ATOM 49 CA ARG q 6 222.901 5.072 230.751 1.00 46.94 ATOM 50 C ARG q 6 222.382 6.091 229.743 1.00 45.83 ATOM 51 O ARG q 6 221.303 6.670 229.916 1.00 45.31 ATOM 52 CB ARG q 6 224.077 5.681 231.533 1.00 48.29 ATOM 53 CG ARG q 6 223.721 6.128 232.942 1.00 49.29 ATOM 54 CD ARG q 6 223.749 7.637 233.148 1.00 48.37 ATOM 55 NE ARG q 6 224.943 8.061 233.927 1.00 49.96 ATOM 56 CZ ARG q 6 225.048 9.224 234.608 1.00 50.09 ATOM 57 NH1 ARG q 6 224.032 10.112 234.649 1.00 48.91 ATOM 58 NH2 ARG q 6 226.174 9.513 235.266 1.00 51.71 ATOM 59 N LYS q 7 223.159 6.314 228.686 1.00 42.35 ATOM 60 CA LYS q 7 222.725 7.220 227.643 1.00 42.99 ATOM 61 C LYS q 7 221.322 6.865 227.215 1.00 43.15 ATOM 62 O LYS q 7 220.461 7.726 227.220 1.00 43.51 ATOM 63 CB LYS q 7 223.647 7.181 226.454 1.00 44.30 ATOM 64 CG LYS q 7 223.258 8.160 225.403 1.00 46.42 ATOM 65 CD LYS q 7 224.352 8.185 224.419 1.00 47.62 ATOM 66 CE LYS q 7 224.087 9.122 223.326 1.00 50.47 ATOM 67 NZ LYS q 7 225.338 9.145 222.579 1.00 50.95 ATOM 68 N LYS q 8 221.077 5.595 226.901 1.00 43.81 ATOM 69 CA LYS q 8 219.717 5.153 226.569 1.00 43.58 ATOM 70 C LYS q 8 218.709 5.522 227.675 1.00 42.57 ATOM 71 O LYS q 8 217.589 5.949 227.404 1.00 42.86 ATOM 72 CB LYS q 8 219.690 3.640 226.299 1.00 43.31 ATOM 73 CG LYS q 8 218.426 3.147 225.593 1.00 43.89 ATOM 74 CD LYS q 8 218.488 1.658 225.423 1.00 43.66 ATOM 75 CE LYS q 8 218.907 1.244 224.048 1.00 45.40 ATOM 76 NZ LYS q 8 217.697 1.022 223.221 1.00 46.80 ATOM 77 N ARG q 9 219.134 5.388 228.918 1.00 43.41 ATOM 78 CA ARG q 9 218.224 5.628 230.016 1.00 43.04 ATOM 79 C ARG q 9 217.795 7.089 230.018 1.00 43.20 ATOM 80 O ARG q 9 216.599 7.379 230.040 1.00 43.37 ATOM 81 CB ARG q 9 218.868 5.227 231.361 1.00 43.67 ATOM 82 CG ARG q 9 217.984 5.200 232.599 1.00 44.67 ATOM 83 CD ARG q 9 218.900 5.405 233.795 1.00 46.77 ATOM 84 NE ARG q 9 218.846 4.457 234.923 1.00 50.28 ATOM 85 CZ ARG q 9 218.685 3.135 234.834 1.00 51.86 ATOM 86 NH1 ARG q 9 218.535 2.535 233.646 1.00 49.54 ATOM 87 NH2 ARG q 9 218.674 2.400 235.948 1.00 56.32 ATOM 88 N THR q 10 218.744 8.015 229.977 1.00 43.50 ATOM 89 CA THR q 10 218.355 9.410 230.114 1.00 44.04 ATOM 90 C THR q 10 217.396 9.831 229.002 1.00 45.92 ATOM 91 O THR q 10 216.468 10.605 229.223 1.00 46.63 ATOM 92 CB THR q 10 219.558 10.335 230.104 1.00 44.45 ATOM 93 OG1 THR q 10 219.857 10.707 228.753 1.00 46.07 ATOM 94 CG2 THR q 10 220.757 9.656 230.761 1.00 43.84 ATOM 95 N ARG q 11 217.621 9.290 227.814 1.00 42.48 ATOM 96 CA ARG q 11 216.792 9.578 226.676 1.00 45.99 ATOM 97 C ARG q 11 215.396 9.006 226.854 1.00 45.73 ATOM 98 O ARG q 11 214.409 9.600 226.405 1.00 48.38 ATOM 99 CB ARG q 11 217.452 9.051 225.417 1.00 48.51 ATOM 100 CG ARG q 11 218.497 10.026 224.945 1.00 50.03 ATOM 101 CD ARG q 11 219.263 9.583 223.689 1.00 53.42 ATOM 102 NE ARG q 11 220.142 10.674 223.217 1.00 54.85 ATOM 103 CZ ARG q 11 221.111 10.535 222.309 1.00 55.61 ATOM 104 NH1 ARG q 11 221.368 9.341 221.759 1.00 55.50 ATOM 105 NH2 ARG q 11 221.826 11.598 221.949 1.00 56.24 ATOM 106 N ARG q 12 215.291 7.860 227.512 1.00 48.01 ATOM 107 CA ARG q 12 213.975 7.395 227.916 1.00 47.35 ATOM 108 C ARG q 12 213.380 8.376 228.905 1.00 46.69 ATOM 109 O ARG q 12 212.292 8.877 228.684 1.00 48.02 ATOM 110 CB ARG q 12 214.047 6.011 228.507 1.00 45.27 ATOM 111 CG ARG q 12 214.192 4.971 227.456 1.00 46.07 ATOM 112 CD ARG q 12 214.725 3.696 228.060 1.00 44.36 ATOM 113 NE ARG q 12 214.965 2.679 227.045 1.00 44.89 ATOM 114 CZ ARG q 12 215.266 1.422 227.341 1.00 43.89 ATOM 115 NH1 ARG q 12 215.337 1.046 228.618 1.00 43.20 ATOM 116 NH2 ARG q 12 215.486 0.541 226.371 1.00 44.40 ATOM 117 N LEU q 13 214.103 8.663 229.979 1.00 46.20 ATOM 118 CA LEU q 13 213.672 9.662 230.949 1.00 45.95 ATOM 119 C LEU q 13 213.190 10.955 230.293 1.00 47.92 ATOM 120 O LEU q 13 212.111 11.451 230.608 1.00 48.54 ATOM 121 CB LEU q 13 214.817 9.985 231.912 1.00 45.03 ATOM 122 CG LEU q 13 214.515 10.063 233.419 1.00 44.95 ATOM 123 CD1 LEU q 13 215.784 10.439 234.160 1.00 44.95 ATOM 124 CD2 LEU q 13 213.373 11.031 233.768 1.00 45.52 ATOM 125 N LYS q 14 214.002 11.477 229.375 1.00 43.32 ATOM 126 CA LYS q 14 213.730 12.743 228.711 1.00 46.51 ATOM 127 C LYS q 14 212.362 12.763 228.021 1.00 49.33 ATOM 128 O LYS q 14 211.547 13.640 228.289 1.00 50.68 ATOM 129 CB LYS q 14 214.840 13.067 227.717 1.00 48.99 ATOM 130 CG LYS q 14 215.626 14.277 228.158 1.00 49.02 ATOM 131 CD LYS q 14 217.069 14.333 227.644 1.00 49.52 ATOM 132 CE LYS q 14 217.170 14.926 226.239 1.00 54.12 ATOM 133 NZ LYS q 14 218.182 16.004 226.171 1.00 54.69 ATOM 134 N ARG q 15 212.106 11.795 227.151 1.00 48.32 ATOM 135 CA ARG q 15 210.823 11.678 226.499 1.00 50.64 ATOM 136 C ARG q 15 209.676 11.684 227.503 1.00 48.17 ATOM 137 O ARG q 15 208.665 12.345 227.301 1.00 50.14 ATOM 138 CB ARG q 15 210.796 10.405 225.680 1.00 50.86 ATOM 139 CG ARG q 15 211.382 10.542 224.313 1.00 55.45 ATOM 140 CD ARG q 15 210.823 9.455 223.414 1.00 56.37 ATOM 141 NE ARG q 15 211.248 8.129 223.870 1.00 52.52 ATOM 142 CZ ARG q 15 212.407 7.562 223.522 1.00 53.03 ATOM 143 NH1 ARG q 15 213.234 8.229 222.709 1.00 57.67 ATOM 144 NH2 ARG q 15 212.750 6.337 223.979 1.00 49.44 ATOM 145 N LYS q 16 209.860 10.948 228.597 1.00 52.13 ATOM 146 CA LYS q 16 208.864 10.837 229.663 1.00 50.62 ATOM 147 C LYS q 16 208.599 12.187 230.360 1.00 51.40 ATOM 148 O LYS q 16 207.441 12.559 230.603 1.00 52.44 ATOM 149 CB LYS q 16 209.295 9.801 230.692 1.00 47.89 ATOM 150 CG LYS q 16 208.114 9.101 231.327 1.00 47.62 ATOM 151 CD LYS q 16 208.462 8.357 232.651 1.00 46.57 ATOM 152 CE LYS q 16 209.361 9.184 233.593 1.00 46.42 ATOM 153 NZ LYS q 16 209.857 8.398 234.773 1.00 46.67 ATOM 154 N ARG q 17 209.660 12.918 230.680 1.00 50.63 ATOM 155 CA ARG q 17 209.496 14.266 231.183 1.00 51.62 ATOM 156 C ARG q 17 208.805 15.126 230.138 1.00 55.66 ATOM 157 O ARG q 17 207.798 15.755 230.426 1.00 56.90 ATOM 158 CB ARG q 17 210.845 14.881 231.559 1.00 50.59 ATOM 159 CG ARG q 17 211.410 14.518 232.953 1.00 47.63 ATOM 160 CD ARG q 17 212.814 15.131 233.114 1.00 47.03 ATOM 161 NE ARG q 17 213.639 14.457 234.123 1.00 45.21 ATOM 162 CZ ARG q 17 213.572 14.704 235.441 1.00 44.95 ATOM 163 NH1 ARG q 17 212.697 15.620 235.926 1.00 45.62 ATOM 164 NH2 ARG q 17 214.364 14.028 236.287 1.00 44.73 ATOM 165 N ARG q 18 209.344 15.142 228.921 1.00 49.52 ATOM 166 CA ARG q 18 208.808 15.950 227.829 1.00 54.56 ATOM 167 C ARG q 18 207.311 15.749 227.718 1.00 54.95 ATOM 168 O ARG q 18 206.557 16.701 227.571 1.00 57.50 ATOM 169 CB ARG q 18 209.496 15.586 226.509 1.00 57.55 ATOM 170 CG ARG q 18 209.422 16.664 225.427 1.00 62.88 ATOM 171 CD ARG q 18 209.704 16.109 223.998 1.00 66.38 ATOM 172 NE ARG q 18 209.005 16.908 222.971 1.00 70.01 ATOM 173 CZ ARG q 18 209.493 17.273 221.772 1.00 73.35 ATOM 174 NH1 ARG q 18 208.726 18.010 220.958 1.00 74.99 ATOM 175 NH2 ARG q 18 210.727 16.922 221.371 1.00 74.46 ATOM 176 N LYS q 19 206.901 14.490 227.841 1.00 54.27 ATOM 177 CA LYS q 19 205.512 14.062 227.735 1.00 54.26 ATOM 178 C LYS q 19 204.654 14.454 228.928 1.00 53.28 ATOM 179 O LYS q 19 203.540 14.908 228.740 1.00 55.34 ATOM 180 CB LYS q 19 205.468 12.553 227.550 1.00 51.81 ATOM 181 CG LYS q 19 204.525 12.043 226.461 1.00 53.64 ATOM 182 CD LYS q 19 205.055 10.733 225.836 1.00 52.53 ATOM 183 CE LYS q 19 203.971 9.940 225.079 1.00 53.02 ATOM 184 NZ LYS q 19 203.311 8.887 225.934 1.00 50.24 ATOM 185 N VAL q 20 205.140 14.266 230.151 1.00 51.96 ATOM 186 CA VAL q 20 204.418 14.788 231.327 1.00 52.01 ATOM 187 C VAL q 20 204.166 16.282 231.201 1.00 54.31 ATOM 188 O VAL q 20 203.087 16.765 231.493 1.00 55.82 ATOM 189 CB VAL q 20 205.172 14.563 232.651 1.00 49.86 ATOM 190 CG1 VAL q 20 204.559 15.404 233.723 1.00 50.68 ATOM 191 CG2 VAL q 20 205.157 13.110 233.060 1.00 48.44 ATOM 192 N ARG q 21 205.177 17.013 230.757 1.00 50.17 ATOM 193 CA ARG q 21 205.051 18.455 230.574 1.00 50.90 ATOM 194 C ARG q 21 203.923 18.784 229.578 1.00 53.13 ATOM 195 O ARG q 21 203.053 19.622 229.859 1.00 54.14 ATOM 196 CB ARG q 21 206.377 19.044 230.110 1.00 50.50 ATOM 197 CG ARG q 21 206.380 20.529 230.134 1.00 51.29 ATOM 198 CD ARG q 21 207.469 21.061 230.973 1.00 50.29 ATOM 199 NE ARG q 21 208.374 21.892 230.207 1.00 51.27 ATOM 200 CZ ARG q 21 208.337 23.204 230.232 1.00 52.34 ATOM 201 NH1 ARG q 21 207.430 23.764 230.990 1.00 52.30 ATOM 202 NH2 ARG q 21 209.178 23.939 229.517 1.00 53.67 ATOM 203 N ALA q 22 203.949 18.114 228.424 1.00 57.10 ATOM 204 CA ALA q 22 202.845 18.140 227.470 1.00 59.68 ATOM 205 C ALA q 22 201.484 18.159 228.156 1.00 59.54 ATOM 206 O ALA q 22 200.663 19.026 227.884 1.00 61.85 ATOM 207 CB ALA q 22 202.926 16.953 226.553 1.00 59.02 ATOM 208 N ARG q 23 201.273 17.211 229.068 1.00 63.20 ATOM 209 CA ARG q 23 199.997 17.029 229.766 1.00 63.46 ATOM 210 C ARG q 23 199.370 18.329 230.254 1.00 66.00 ATOM 211 O ARG q 23 198.170 18.392 230.519 1.00 67.59 ATOM 212 CB ARG q 23 200.192 16.096 230.955 1.00 60.08 ATOM 213 CG ARG q 23 198.952 15.389 231.380 1.00 60.07 ATOM 214 CD ARG q 23 199.135 13.876 231.243 1.00 57.61 ATOM 215 NE ARG q 23 199.566 13.281 232.510 1.00 55.44 ATOM 216 CZ ARG q 23 198.766 13.165 233.578 1.00 56.24 ATOM 217 NH1 ARG q 23 197.503 13.614 233.487 1.00 59.01 ATOM 218 NH2 ARG q 23 199.218 12.609 234.722 1.00 54.64 ATOM 219 N SER q 24 200.185 19.367 230.385 1.00 62.09 ATOM 220 CA SER q 24 199.687 20.633 230.874 1.00 64.05 ATOM 221 C SER q 24 199.336 21.506 229.714 1.00 66.94 ATOM 222 O SER q 24 199.086 22.698 229.890 1.00 68.48 ATOM 223 CB SER q 24 200.723 21.339 231.697 1.00 62.62 ATOM 224 OG SER q 24 201.495 22.122 230.807 1.00 63.79 ATOM 225 N LYS q 25 199.334 20.896 228.529 1.00 67.79 ATOM 226 CA LYS q 25 199.330 21.608 227.240 1.00 69.72 ATOM 227 C LYS q 25 200.560 22.518 227.234 1.00 69.82 ATOM 228 O LYS q 25 201.619 22.136 227.789 1.00 68.43 ATOM 229 CB LYS q 25 198.019 22.368 227.010 1.00 71.15 ATOM 230 CG LYS q 25 196.765 21.449 226.900 1.00 70.81 ATOM 231 CD LYS q 25 196.542 20.817 225.501 1.00 71.20 ATOM 232 CE LYS q 25 195.112 21.139 224.956 1.00 72.16 ATOM 233 NZ LYS q 25 194.676 20.449 223.670 1.00 72.50 TER