HEADER VIRAL PROTEIN 30-MAR-15 4UIH TITLE Cryo-EM structure of Dengue virus serotype 2 strain New Guinea-C TITLE 2 complexed with human antibody 2D22 Fab at 37 degree C. The Fab TITLE 3 molecules were added to the virus before 37 degree C incubation. COMPND MOL_ID: 2; COMPND 2 MOLECULE: ANTIGEN-BINDING FRAGMENT OF HUMAN ANTIBODY 2D22 -HEAVY COMPND 3 CHAIN: D, F; EXPDTA ELECTRON MICROSCOPY DBREF 4UIH F 1 128 PDB 4UIH 4UIH 1 128 SEQRES 1 F 119 GLN LEU VAL GLU SER GLY ALA GLU VAL LYS LYS PRO GLY SEQRES 2 F 119 SER SER VAL LYS VAL SER CYS LYS ALA SER GLY GLY THR SEQRES 3 F 119 PHE ASN ASN TYR ALA ILE SER TRP VAL ARG GLN ALA PRO SEQRES 4 F 119 GLY GLN GLY LEU GLU TRP MET GLY GLY ILE ILE PRO ILE SEQRES 5 F 119 PHE GLY GLY ALA ASN TYR ALA GLN LYS PHE GLN GLY ARG SEQRES 6 F 119 VAL THR ILE THR ALA ASP ARG SER THR SER THR VAL TYR SEQRES 7 F 119 MET GLU LEU SER GLY LEU ARG SER GLU ASP THR ALA VAL SEQRES 8 F 119 TYR TYR CYS ALA ARG ARG PRO GLN SER ILE PHE ASP TRP SEQRES 9 F 119 ASN PHE ASP LEU TRP GLY ARG GLY THR LEU VAL THR VAL SEQRES 10 F 119 SER SER ATOM 1 CA GLN F 3 49.920 188.292-169.802 1.00 0.00 ATOM 2 CA LEU F 4 46.951 189.603-171.821 1.00 0.00 ATOM 3 CA VAL F 5 47.508 189.913-175.588 1.00 0.00 ATOM 4 CA GLU F 6 45.167 191.757-177.852 1.00 0.00 ATOM 5 CA SER F 7 44.204 191.912-181.512 1.00 0.00 ATOM 6 CA GLY F 8 45.524 194.594-183.930 1.00 0.00 ATOM 7 CA ALA F 9 44.334 198.163-184.479 1.00 0.00 ATOM 8 CA GLU F 10 40.848 198.690-186.030 1.00 0.00 ATOM 9 CA VAL F 11 39.452 201.369-188.403 1.00 0.00 ATOM 10 CA LYS F 12 35.642 201.583-188.340 1.00 0.00 ATOM 11 CA LYS F 13 33.424 204.338-189.662 1.00 0.00 ATOM 12 CA PRO F 14 30.582 206.181-187.626 1.00 0.00 ATOM 13 CA GLY F 15 27.444 204.124-186.919 1.00 0.00 ATOM 14 CA SER F 16 29.020 200.766-187.117 1.00 0.00 ATOM 15 CA SER F 17 30.083 198.257-184.564 1.00 0.00 ATOM 16 CA VAL F 18 33.558 196.713-183.519 1.00 0.00 ATOM 17 CA LYS F 19 34.246 193.479-181.550 1.00 0.00 ATOM 18 CA VAL F 20 37.694 193.577-179.967 1.00 0.00 ATOM 19 CA SER F 21 39.338 190.469-178.778 1.00 0.00 ATOM 20 CA CYS F 22 41.685 189.913-175.875 1.00 0.00 ATOM 21 CA LYS F 23 43.311 186.481-175.573 1.00 0.00 ATOM 22 CA ALA F 24 44.061 186.000-171.892 1.00 0.00 ATOM 23 CA SER F 25 46.864 183.746-170.857 1.00 0.00 ATOM 24 CA GLY F 26 49.932 183.456-168.669 1.00 0.00 ATOM 25 CA GLY F 27 48.307 182.990-165.363 1.00 0.00 ATOM 26 CA THR F 28 45.687 180.745-163.658 1.00 0.00 ATOM 27 CA PHE F 29 42.741 180.366-165.911 1.00 0.00 ATOM 28 CA ASN F 30 40.139 180.062-163.188 1.00 0.00 ATOM 29 CA ASN F 31 41.279 183.423-161.888 1.00 0.00 ATOM 30 CA TYR F 32 40.789 185.229-165.194 1.00 0.00 ATOM 31 CA ALA F 33 38.279 188.041-165.064 1.00 0.00 ATOM 32 CA ILE F 34 38.445 191.271-167.244 1.00 0.00 ATOM 33 CA SER F 35 37.287 194.834-167.290 1.00 0.00 ATOM 34 CA TRP F 36 37.336 197.190-170.088 1.00 0.00 ATOM 35 CA VAL F 37 38.712 200.582-169.748 1.00 0.00 ATOM 36 CA ARG F 38 38.971 203.033-172.720 1.00 0.00 ATOM 37 CA GLN F 39 41.193 206.190-173.013 1.00 0.00 ATOM 38 CA ALA F 40 40.288 208.903-175.582 1.00 0.00 ATOM 39 CA PRO F 41 42.941 211.543-176.287 1.00 0.00 ATOM 40 CA GLY F 42 42.330 214.588-174.049 1.00 0.00 ATOM 41 CA GLN F 43 40.317 212.526-171.637 1.00 0.00 ATOM 42 CA GLY F 44 41.456 210.453-168.727 1.00 0.00 ATOM 43 CA LEU F 45 40.948 206.644-168.149 1.00 0.00 ATOM 44 CA GLU F 46 37.191 205.755-168.135 1.00 0.00 ATOM 45 CA TRP F 47 36.108 202.391-166.734 1.00 0.00 ATOM 46 CA MET F 48 33.394 200.976-168.918 1.00 0.00 ATOM 47 CA GLY F 49 32.278 197.701-167.615 1.00 0.00 ATOM 48 CA GLY F 50 33.408 194.352-166.200 1.00 0.00 ATOM 49 CA ILE F 51 32.879 190.564-166.645 1.00 0.00 ATOM 50 CA ILE F 52 34.039 187.643-164.454 1.00 0.00 ATOM 51 CA PRO F 53 34.028 184.747-167.082 1.00 0.00 ATOM 52 CA ILE F 54 33.984 181.965-164.579 1.00 0.00 ATOM 53 CA PHE F 55 30.537 182.949-163.373 1.00 0.00 ATOM 54 CA GLY F 56 29.611 185.206-166.318 1.00 0.00 ATOM 55 CA GLY F 57 28.594 187.931-163.879 1.00 0.00 ATOM 56 CA ALA F 58 29.084 191.342-165.446 1.00 0.00 ATOM 57 CA ASN F 59 28.268 194.881-164.286 1.00 0.00 ATOM 58 CA TYR F 60 28.184 198.217-166.200 1.00 0.00 ATOM 59 CA ALA F 61 28.321 201.939-165.399 1.00 0.00 ATOM 60 CA GLN F 62 25.279 203.813-166.550 1.00 0.00 ATOM 61 CA LYS F 63 27.423 205.836-168.989 1.00 0.00 ATOM 62 CA PHE F 64 27.948 202.898-171.340 1.00 0.00 ATOM 63 CA GLN F 65 24.589 201.149-170.708 1.00 0.00 ATOM 64 CA GLY F 66 22.918 200.152-173.956 1.00 0.00 ATOM 65 CA ARG F 67 26.051 200.305-176.091 1.00 0.00 ATOM 66 CA VAL F 68 28.731 197.864-174.839 1.00 0.00 ATOM 67 CA THR F 69 28.279 194.166-174.645 1.00 0.00 ATOM 68 CA ILE F 70 31.075 192.104-173.113 1.00 0.00 ATOM 69 CA THR F 71 31.177 188.361-173.814 1.00 0.00 ATOM 70 CA ALA F 72 33.595 185.618-173.165 1.00 0.00 ATOM 71 CA ASP F 73 34.284 182.259-174.717 1.00 0.00 ATOM 72 CA ARG F 74 35.644 179.876-172.279 1.00 0.00 ATOM 73 CA SER F 75 36.680 177.014-174.697 1.00 0.00 ATOM 74 CA THR F 76 38.733 179.388-176.745 1.00 0.00 ATOM 75 CA SER F 77 39.980 181.346-173.686 1.00 0.00 ATOM 76 CA THR F 78 39.315 184.622-175.420 1.00 0.00 ATOM 77 CA VAL F 79 37.207 187.562-173.985 1.00 0.00 ATOM 78 CA TYR F 80 35.477 189.931-176.325 1.00 0.00 ATOM 79 CA MET F 81 34.252 193.510-176.040 1.00 0.00 ATOM 80 CA GLU F 82 31.751 194.523-178.663 1.00 0.00 ATOM 81 CA LEU F 83 31.020 198.198-178.842 1.00 0.00 ATOM 82 CA SER F 84 28.168 199.497-181.069 1.00 0.00 ATOM 83 CA GLY F 85 26.579 202.943-181.370 1.00 0.00 ATOM 84 CA LEU F 86 29.897 204.263-182.965 1.00 0.00 ATOM 85 CA ARG F 87 30.689 207.874-183.895 1.00 0.00 ATOM 86 CA SER F 88 33.896 209.867-184.474 1.00 0.00 ATOM 87 CA GLU F 89 34.560 210.860-180.763 1.00 0.00 ATOM 88 CA ASP F 90 34.580 207.195-179.868 1.00 0.00 ATOM 89 CA THR F 91 38.097 206.959-181.300 1.00 0.00 ATOM 90 CA ALA F 92 40.112 205.804-178.280 1.00 0.00 ATOM 91 CA VAL F 93 42.447 203.045-177.122 1.00 0.00 ATOM 92 CA TYR F 94 40.487 200.213-175.617 1.00 0.00 ATOM 93 CA TYR F 95 42.153 198.065-172.930 1.00 0.00 ATOM 94 CA CYS F 96 41.359 194.712-171.306 1.00 0.00 ATOM 95 CA ALA F 97 42.851 194.535-167.872 1.00 0.00 ATOM 96 CA ARG F 98 42.567 191.579-165.540 1.00 0.00 ATOM 97 CA ARG F 99 41.766 191.572-161.829 1.00 0.00 ATOM 98 CA PRO F 100 38.315 190.342-160.306 1.00 0.00 ATOM 99 CA GLN F 101 38.489 187.440-157.809 1.00 0.00 ATOM 100 CA SER F 102 37.666 188.905-154.395 1.00 0.00 ATOM 101 CA ILE F 103 35.558 191.195-152.317 1.00 0.00 ATOM 102 CA PHE F 104 38.332 193.765-151.992 1.00 0.00 ATOM 103 CA ASP F 105 39.805 193.122-155.476 1.00 0.00 ATOM 104 CA TRP F 106 39.625 196.390-157.340 1.00 0.00 ATOM 105 CA ASN F 107 43.333 196.179-158.266 1.00 0.00 ATOM 106 CA PHE F 108 44.731 195.593-161.827 1.00 0.00 ATOM 107 CA ASP F 109 47.722 193.323-162.107 1.00 0.00 ATOM 108 CA LEU F 110 47.595 191.680-165.602 1.00 0.00 ATOM 109 CA TRP F 111 47.289 194.226-168.399 1.00 0.00 ATOM 110 CA GLY F 112 46.480 194.336-172.138 1.00 0.00 ATOM 111 CA ARG F 113 48.673 196.146-174.566 1.00 0.00 ATOM 112 CA GLY F 114 46.086 198.515-175.854 1.00 0.00 ATOM 113 CA THR F 115 43.856 198.355-179.042 1.00 0.00 ATOM 114 CA LEU F 116 43.249 201.553-180.904 1.00 0.00 ATOM 115 CA VAL F 117 39.792 201.737-182.445 1.00 0.00 ATOM 116 CA THR F 118 39.716 204.645-184.867 1.00 0.00 ATOM 117 CA VAL F 119 36.225 205.668-185.624 1.00 0.00 ATOM 118 CA SER F 120 36.047 207.983-188.595 1.00 0.00 ATOM 119 CA SER F 121 35.501 207.985-192.256 1.00 0.00 TER