HEADER RIBOSOME 31-DEC-69 4V4B TITLE Structure of the ribosomal 80S-eEF2-sordarin complex from yeast TITLE 2 obtained by docking atomic models for RNA and protein components into TITLE 3 a 11.7 A cryo-EM map. COMPND MOL_ID: 14; COMPND 2 MOLECULE: 40S ribosomal protein S29-B; COMPND 3 CHAIN: AN; EXPDTA ELECTRON MICROSCOPY DBREF 4V4B A 20 55 UNP P41058 R29B_YEAST 20 55 SEQRES 1 AN 29 CYS ARG VAL CYS SER SER HIS THR GLY LEU VAL ARG LYS SEQRES 2 AN 29 TYR ASP LEU ASN ILE CYS ARG GLN CYS PHE ARG GLU LYS SEQRES 3 AN 29 ALA ASN ASP ATOM 1 N CYS A 20 -99.275 4.782 -6.030 1.00 57.09 ATOM 2 CA CYS A 20 -100.445 4.144 -6.659 1.00 57.09 ATOM 3 C CYS A 20 -101.022 5.056 -7.675 1.00 57.09 ATOM 4 O CYS A 20 -100.368 5.421 -8.650 1.00 57.09 ATOM 5 CB CYS A 20 -101.571 3.874 -5.658 1.00 57.09 ATOM 6 SG CYS A 20 -102.718 2.626 -6.305 1.00 57.09 ATOM 7 N ARG A 21 -102.291 5.447 -7.466 1.00191.79 ATOM 8 CA ARG A 21 -102.895 6.252 -8.470 1.00191.79 ATOM 9 C ARG A 21 -102.185 7.568 -8.557 1.00191.79 ATOM 10 O ARG A 21 -101.856 8.005 -9.659 1.00191.79 ATOM 11 CB ARG A 21 -104.402 6.501 -8.261 1.00191.79 ATOM 12 CG ARG A 21 -105.079 6.689 -9.621 1.00191.79 ATOM 13 CD ARG A 21 -106.606 6.703 -9.608 1.00191.79 ATOM 14 NE ARG A 21 -107.078 5.473 -8.908 1.00191.79 ATOM 15 CZ ARG A 21 -106.973 4.245 -9.493 1.00191.79 ATOM 16 NH1 ARG A 21 -106.258 4.088 -10.647 1.00191.79 ATOM 17 NH2 ARG A 21 -107.580 3.167 -8.915 1.00191.79 ATOM 18 N VAL A 22 -101.952 8.270 -7.426 1.00139.24 ATOM 19 CA VAL A 22 -101.281 9.535 -7.589 1.00139.24 ATOM 20 C VAL A 22 -99.814 9.422 -7.913 1.00139.24 ATOM 21 O VAL A 22 -99.385 9.765 -9.014 1.00139.24 ATOM 22 CB VAL A 22 -101.424 10.474 -6.417 1.00139.24 ATOM 23 CG1 VAL A 22 -100.953 9.805 -5.111 1.00139.24 ATOM 24 CG2 VAL A 22 -100.648 11.753 -6.782 1.00139.24 ATOM 25 N CYS A 23 -99.017 8.923 -6.942 1.00136.00 ATOM 26 CA CYS A 23 -97.582 8.843 -6.996 1.00136.00 ATOM 27 C CYS A 23 -97.127 7.702 -7.845 1.00136.00 ATOM 28 O CYS A 23 -96.082 7.773 -8.490 1.00136.00 ATOM 29 CB CYS A 23 -96.931 8.754 -5.606 1.00136.00 ATOM 30 SG CYS A 23 -95.146 9.066 -5.714 1.00136.00 ATOM 31 N SER A 24 -97.940 6.632 -7.889 1.00219.17 ATOM 32 CA SER A 24 -97.627 5.428 -8.600 1.00219.17 ATOM 33 C SER A 24 -96.588 4.644 -7.862 1.00219.17 ATOM 34 O SER A 24 -95.916 3.788 -8.434 1.00219.17 ATOM 35 CB SER A 24 -97.144 5.688 -10.037 1.00219.17 ATOM 36 OG SER A 24 -96.959 4.455 -10.722 1.00219.17 ATOM 37 N SER A 25 -96.405 4.899 -6.551 1.00137.75 ATOM 38 CA SER A 25 -95.522 3.957 -5.941 1.00137.75 ATOM 39 C SER A 25 -96.308 2.695 -5.785 1.00137.75 ATOM 40 O SER A 25 -97.285 2.630 -5.045 1.00137.75 ATOM 41 CB SER A 25 -94.913 4.348 -4.583 1.00137.75 ATOM 42 OG SER A 25 -94.171 3.249 -4.067 1.00137.75 ATOM 43 N HIS A 26 -95.852 1.652 -6.506 1.00 96.27 ATOM 44 CA HIS A 26 -96.456 0.352 -6.563 1.00 96.27 ATOM 45 C HIS A 26 -96.316 -0.367 -5.265 1.00 96.27 ATOM 46 O HIS A 26 -97.191 -1.155 -4.909 1.00 96.27 ATOM 47 CB HIS A 26 -95.836 -0.585 -7.622 1.00 96.27 ATOM 48 CG HIS A 26 -96.236 -0.276 -9.032 1.00 96.27 ATOM 49 ND1 HIS A 26 -97.373 -0.769 -9.634 1.00 96.27 ATOM 50 CD2 HIS A 26 -95.623 0.496 -9.975 1.00 96.27 ATOM 51 CE1 HIS A 26 -97.391 -0.283 -10.900 1.00 96.27 ATOM 52 NE2 HIS A 26 -96.352 0.492 -11.153 1.00 96.27 ATOM 53 N THR A 27 -95.257 -0.074 -4.490 1.00157.54 ATOM 54 CA THR A 27 -94.851 -0.914 -3.394 1.00157.54 ATOM 55 C THR A 27 -95.934 -1.190 -2.393 1.00157.54 ATOM 56 O THR A 27 -95.893 -2.240 -1.750 1.00157.54 ATOM 57 CB THR A 27 -93.619 -0.439 -2.684 1.00157.54 ATOM 58 OG1 THR A 27 -93.143 -1.452 -1.809 1.00157.54 ATOM 59 CG2 THR A 27 -93.942 0.831 -1.902 1.00157.54 ATOM 60 N GLY A 28 -96.939 -0.315 -2.196 1.00199.77 ATOM 61 CA GLY A 28 -97.914 -0.761 -1.236 1.00199.77 ATOM 62 C GLY A 28 -98.909 0.312 -0.997 1.00199.77 ATOM 63 O GLY A 28 -98.823 1.131 -0.082 1.00199.77 ATOM 64 N LEU A 29 -99.969 0.232 -1.819 1.00148.47 ATOM 65 CA LEU A 29 -101.024 1.182 -1.791 1.00148.47 ATOM 66 C LEU A 29 -102.207 0.433 -1.320 1.00148.47 ATOM 67 O LEU A 29 -102.415 -0.713 -1.711 1.00148.47 ATOM 68 CB LEU A 29 -101.411 1.667 -3.183 1.00148.47 ATOM 69 CG LEU A 29 -100.136 1.963 -3.967 1.00148.47 ATOM 70 CD1 LEU A 29 -99.206 2.801 -3.097 1.00148.47 ATOM 71 CD2 LEU A 29 -99.496 0.693 -4.555 1.00148.47 ATOM 72 N VAL A 30 -103.015 1.053 -0.452 1.00113.49 ATOM 73 CA VAL A 30 -104.190 0.347 -0.060 1.00113.49 ATOM 74 C VAL A 30 -105.121 0.380 -1.229 1.00113.49 ATOM 75 O VAL A 30 -105.105 1.335 -2.003 1.00113.49 ATOM 76 CB VAL A 30 -104.895 0.941 1.109 1.00113.49 ATOM 77 CG1 VAL A 30 -105.189 2.419 0.804 1.00113.49 ATOM 78 CG2 VAL A 30 -106.163 0.105 1.327 1.00113.49 ATOM 79 N ARG A 31 -105.924 -0.695 -1.408 1.00111.38 ATOM 80 CA ARG A 31 -106.828 -0.800 -2.522 1.00111.38 ATOM 81 C ARG A 31 -107.900 0.230 -2.409 1.00111.38 ATOM 82 O ARG A 31 -108.255 0.891 -3.387 1.00111.38 ATOM 83 CB ARG A 31 -107.573 -2.151 -2.597 1.00111.38 ATOM 84 CG ARG A 31 -108.526 -2.397 -1.424 1.00111.38 ATOM 85 CD ARG A 31 -109.345 -3.684 -1.528 1.00111.38 ATOM 86 NE ARG A 31 -110.410 -3.611 -0.487 1.00111.38 ATOM 87 CZ ARG A 31 -111.028 -4.761 -0.095 1.00111.38 ATOM 88 NH1 ARG A 31 -110.611 -5.945 -0.625 1.00111.38 ATOM 89 NH2 ARG A 31 -112.053 -4.730 0.807 1.00111.38 ATOM 90 N LYS A 32 -108.426 0.414 -1.188 1.00 86.68 ATOM 91 CA LYS A 32 -109.566 1.250 -0.996 1.00 86.68 ATOM 92 C LYS A 32 -109.271 2.615 -1.508 1.00 86.68 ATOM 93 O LYS A 32 -110.007 3.153 -2.333 1.00 86.68 ATOM 94 CB LYS A 32 -109.891 1.377 0.491 1.00 86.68 ATOM 95 CG LYS A 32 -111.237 2.028 0.754 1.00 86.68 ATOM 96 CD LYS A 32 -111.699 1.841 2.192 1.00 86.68 ATOM 97 CE LYS A 32 -113.119 2.347 2.396 1.00 86.68 ATOM 98 NZ LYS A 32 -113.173 3.773 2.015 1.00 86.68 ATOM 99 N TYR A 33 -108.182 3.226 -1.023 1.00111.50 ATOM 100 CA TYR A 33 -107.843 4.514 -1.536 1.00111.50 ATOM 101 C TYR A 33 -107.367 4.319 -2.935 1.00111.50 ATOM 102 O TYR A 33 -107.682 5.101 -3.831 1.00111.50 ATOM 103 CB TYR A 33 -106.744 5.205 -0.723 1.00111.50 ATOM 104 CG TYR A 33 -107.351 5.494 0.606 1.00111.50 ATOM 105 CD1 TYR A 33 -107.555 4.475 1.507 1.00111.50 ATOM 106 CD2 TYR A 33 -107.709 6.777 0.949 1.00111.50 ATOM 107 CE1 TYR A 33 -108.117 4.728 2.735 1.00111.50 ATOM 108 CE2 TYR A 33 -108.273 7.035 2.174 1.00111.50 ATOM 109 CZ TYR A 33 -108.478 6.010 3.069 1.00111.50 ATOM 110 OH TYR A 33 -109.058 6.279 4.326 1.00111.50 ATOM 111 N ASP A 34 -106.557 3.255 -3.128 1.00118.54 ATOM 112 CA ASP A 34 -105.937 2.905 -4.373 1.00118.54 ATOM 113 C ASP A 34 -105.188 4.121 -4.801 1.00118.54 ATOM 114 O ASP A 34 -104.958 4.378 -5.980 1.00118.54 ATOM 115 CB ASP A 34 -106.942 2.461 -5.455 1.00118.54 ATOM 116 CG ASP A 34 -106.206 1.615 -6.495 1.00118.54 ATOM 117 OD1 ASP A 34 -105.424 2.197 -7.292 1.00118.54 ATOM 118 OD2 ASP A 34 -106.428 0.377 -6.506 1.00118.54 ATOM 119 N LEU A 35 -104.749 4.888 -3.792 1.00155.53 ATOM 120 CA LEU A 35 -104.088 6.125 -4.030 1.00155.53 ATOM 121 C LEU A 35 -102.895 6.201 -3.180 1.00155.53 ATOM 122 O LEU A 35 -102.519 5.255 -2.481 1.00155.53 ATOM 123 CB LEU A 35 -104.888 7.376 -3.619 1.00155.53 ATOM 124 CG LEU A 35 -105.953 7.907 -4.592 1.00155.53 ATOM 125 CD1 LEU A 35 -106.650 9.137 -3.982 1.00155.53 ATOM 126 CD2 LEU A 35 -105.329 8.215 -5.966 1.00155.53 ATOM 127 N ASN A 36 -102.264 7.382 -3.300 1.00208.26 ATOM 128 CA ASN A 36 -101.172 7.757 -2.484 1.00208.26 ATOM 129 C ASN A 36 -99.972 7.141 -3.085 1.00208.26 ATOM 130 O ASN A 36 -100.073 6.228 -3.899 1.00208.26 ATOM 131 CB ASN A 36 -101.349 7.272 -1.044 1.00208.26 ATOM 132 CG ASN A 36 -102.677 7.850 -0.576 1.00208.26 ATOM 133 OD1 ASN A 36 -103.653 7.134 -0.352 1.00208.26 ATOM 134 ND2 ASN A 36 -102.723 9.201 -0.430 1.00208.26 ATOM 135 N ILE A 37 -98.798 7.658 -2.701 1.00155.68 ATOM 136 CA ILE A 37 -97.582 7.095 -3.166 1.00155.68 ATOM 137 C ILE A 37 -97.654 5.701 -2.672 1.00155.68 ATOM 138 O ILE A 37 -97.338 4.766 -3.399 1.00155.68 ATOM 139 CB ILE A 37 -96.378 7.815 -2.599 1.00155.68 ATOM 140 CG1 ILE A 37 -95.069 7.290 -3.203 1.00155.68 ATOM 141 CG2 ILE A 37 -96.416 7.757 -1.064 1.00155.68 ATOM 142 CD1 ILE A 37 -93.874 8.216 -2.964 1.00155.68 ATOM 143 N CYS A 38 -98.134 5.555 -1.424 1.00140.04 ATOM 144 CA CYS A 38 -98.309 4.320 -0.737 1.00140.04 ATOM 145 C CYS A 38 -98.961 4.748 0.516 1.00140.04 ATOM 146 O CYS A 38 -99.850 5.599 0.529 1.00140.04 ATOM 147 CB CYS A 38 -97.001 3.671 -0.250 1.00140.04 ATOM 148 SG CYS A 38 -95.836 3.207 -1.556 1.00140.04 ATOM 149 N ARG A 39 -98.504 4.158 1.621 1.00215.21 ATOM 150 CA ARG A 39 -99.011 4.619 2.862 1.00215.21 ATOM 151 C ARG A 39 -98.546 6.036 2.980 1.00215.21 ATOM 152 O ARG A 39 -99.224 6.863 3.586 1.00215.21 ATOM 153 CB ARG A 39 -98.463 3.897 4.097 1.00215.21 ATOM 154 CG ARG A 39 -99.147 4.385 5.375 1.00215.21 ATOM 155 CD ARG A 39 -98.282 4.228 6.621 1.00215.21 ATOM 156 NE ARG A 39 -97.345 5.383 6.628 1.00215.21 ATOM 157 CZ ARG A 39 -97.707 6.528 7.277 1.00215.21 ATOM 158 NH1 ARG A 39 -98.853 6.543 8.018 1.00215.21 ATOM 159 NH2 ARG A 39 -96.935 7.650 7.173 1.00215.21 ATOM 160 N GLN A 40 -97.368 6.357 2.400 1.00116.69 ATOM 161 CA GLN A 40 -96.824 7.668 2.628 1.00116.69 ATOM 162 C GLN A 40 -97.756 8.754 2.181 1.00116.69 ATOM 163 O GLN A 40 -98.106 9.620 2.979 1.00116.69 ATOM 164 CB GLN A 40 -95.499 7.958 1.884 1.00116.69 ATOM 165 CG GLN A 40 -94.250 7.242 2.408 1.00116.69 ATOM 166 CD GLN A 40 -93.824 7.855 3.740 1.00116.69 ATOM 167 OE1 GLN A 40 -94.003 7.238 4.786 1.00116.69 ATOM 168 NE2 GLN A 40 -93.231 9.084 3.710 1.00116.69 ATOM 169 N CYS A 41 -98.219 8.735 0.913 1.00 70.70 ATOM 170 CA CYS A 41 -99.056 9.816 0.470 1.00 70.70 ATOM 171 C CYS A 41 -100.360 9.764 1.190 1.00 70.70 ATOM 172 O CYS A 41 -100.965 10.797 1.471 1.00 70.70 ATOM 173 CB CYS A 41 -99.289 9.883 -1.049 1.00 70.70 ATOM 174 SG CYS A 41 -97.808 10.480 -1.930 1.00 70.70 ATOM 175 N PHE A 42 -100.818 8.548 1.521 1.00 67.19 ATOM 176 CA PHE A 42 -102.046 8.399 2.238 1.00 67.19 ATOM 177 C PHE A 42 -101.927 9.213 3.483 1.00 67.19 ATOM 178 O PHE A 42 -102.810 10.009 3.805 1.00 67.19 ATOM 179 CB PHE A 42 -102.258 6.919 2.598 1.00 67.19 ATOM 180 CG PHE A 42 -103.361 6.784 3.578 1.00 67.19 ATOM 181 CD1 PHE A 42 -104.652 7.108 3.240 1.00 67.19 ATOM 182 CD2 PHE A 42 -103.092 6.293 4.831 1.00 67.19 ATOM 183 CE1 PHE A 42 -105.662 6.960 4.161 1.00 67.19 ATOM 184 CE2 PHE A 42 -104.100 6.142 5.753 1.00 67.19 ATOM 185 CZ PHE A 42 -105.387 6.486 5.420 1.00 67.19 ATOM 186 N ARG A 43 -100.800 9.051 4.196 1.00127.59 ATOM 187 CA ARG A 43 -100.527 9.768 5.404 1.00127.59 ATOM 188 C ARG A 43 -100.308 11.220 5.092 1.00127.59 ATOM 189 O ARG A 43 -100.689 12.089 5.877 1.00127.59 ATOM 190 CB ARG A 43 -99.291 9.217 6.145 1.00127.59 ATOM 191 CG ARG A 43 -98.937 9.914 7.466 1.00127.59 ATOM 192 CD ARG A 43 -100.014 9.820 8.553 1.00127.59 ATOM 193 NE ARG A 43 -100.963 10.953 8.348 1.00127.59 ATOM 194 CZ ARG A 43 -101.950 11.223 9.252 1.00127.59 ATOM 195 NH1 ARG A 43 -102.129 10.436 10.353 1.00127.59 ATOM 196 NH2 ARG A 43 -102.775 12.292 9.048 1.00127.59 ATOM 197 N GLU A 44 -99.676 11.518 3.940 1.00 53.39 ATOM 198 CA GLU A 44 -99.354 12.878 3.604 1.00 53.39 ATOM 199 C GLU A 44 -100.598 13.683 3.422 1.00 53.39 ATOM 200 O GLU A 44 -100.727 14.775 3.971 1.00 53.39 ATOM 201 CB GLU A 44 -98.574 13.013 2.284 1.00 53.39 ATOM 202 CG GLU A 44 -97.172 12.401 2.272 1.00 53.39 ATOM 203 CD GLU A 44 -96.420 13.121 1.161 1.00 53.39 ATOM 204 OE1 GLU A 44 -96.747 14.319 0.954 1.00 53.39 ATOM 205 OE2 GLU A 44 -95.519 12.514 0.525 1.00 53.39 ATOM 206 N LYS A 45 -101.557 13.158 2.634 1.00128.94 ATOM 207 CA LYS A 45 -102.752 13.889 2.338 1.00128.94 ATOM 208 C LYS A 45 -103.507 14.028 3.610 1.00128.94 ATOM 209 O LYS A 45 -104.071 15.075 3.916 1.00128.94 ATOM 210 CB LYS A 45 -103.631 13.154 1.315 1.00128.94 ATOM 211 CG LYS A 45 -104.623 14.040 0.553 1.00128.94 ATOM 212 CD LYS A 45 -105.751 14.638 1.393 1.00128.94 ATOM 213 CE LYS A 45 -106.883 15.243 0.550 1.00128.94 ATOM 214 NZ LYS A 45 -106.806 16.721 0.541 1.00128.94 ATOM 215 N ALA A 46 -103.497 12.945 4.399 1.00 27.34 ATOM 216 CA ALA A 46 -104.192 12.903 5.645 1.00 27.34 ATOM 217 C ALA A 46 -103.596 13.942 6.541 1.00 27.34 ATOM 218 O ALA A 46 -104.298 14.596 7.307 1.00 27.34 ATOM 219 CB ALA A 46 -104.053 11.530 6.327 1.00 27.34 ATOM 220 N ASN A 47 -102.271 14.134 6.450 1.00 74.82 ATOM 221 CA ASN A 47 -101.616 15.016 7.363 1.00 74.82 ATOM 222 C ASN A 47 -102.128 16.416 7.251 1.00 74.82 ATOM 223 O ASN A 47 -102.356 17.067 8.268 1.00 74.82 ATOM 224 CB ASN A 47 -100.099 15.056 7.168 1.00 74.82 ATOM 225 CG ASN A 47 -99.551 15.714 8.418 1.00 74.82 ATOM 226 OD1 ASN A 47 -99.827 15.271 9.532 1.00 74.82 ATOM 227 ND2 ASN A 47 -98.766 16.806 8.230 1.00 74.82 ATOM 228 N ASP A 48 -102.327 16.950 6.032 1.00 78.11 ATOM 229 CA ASP A 48 -102.792 18.302 6.071 1.00 78.11 ATOM 230 C ASP A 48 -104.311 18.273 6.213 1.00 78.11 ATOM 231 O ASP A 48 -104.801 17.442 7.024 1.00 78.11 ATOM 232 CB ASP A 48 -102.375 19.178 4.864 1.00 78.11 ATOM 233 CG ASP A 48 -103.014 18.736 3.556 1.00 78.11 ATOM 234 OD1 ASP A 48 -103.453 17.557 3.442 1.00 78.11 ATOM 235 OD2 ASP A 48 -103.066 19.596 2.636 1.00 78.11 TER