HEADER RIBOSOME 13-DEC-10 4V84 TITLE Crystal structure of a complex containing domain 3 of CrPV IGR IRES TITLE 2 RNA bound to the 70S ribosome. COMPND MOL_ID: 49; COMPND 2 MOLECULE: 50S ribosomal protein L31; COMPND 3 CHAIN: B1, D1; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.40 ANGSTORMS DBREF 4V84 D 36 65 UNP Q72JR0 RL31_THET2 10 39 SEQRES 1 D1 30 VAL PRO ALA ARG ILE ILE CYS GLY CYS GLY ASN VAL ILE SEQRES 2 D1 30 GLU THR TYR SER THR LYS PRO GLU ILE TYR VAL GLU VAL SEQRES 3 D1 30 CYS SER LYS CYS ATOM 1 N VAL D 36 -181.872 -5.175 50.285 1.00169.54 ATOM 2 CA VAL D 36 -182.791 -4.070 50.531 1.00180.26 ATOM 3 C VAL D 36 -183.605 -3.749 49.274 1.00197.21 ATOM 4 O VAL D 36 -183.253 -4.197 48.184 1.00198.85 ATOM 5 CB VAL D 36 -182.028 -2.820 50.991 1.00180.22 ATOM 6 CG1 VAL D 36 -181.302 -3.104 52.293 1.00172.89 ATOM 7 CG2 VAL D 36 -181.051 -2.380 49.920 1.00185.04 ATOM 8 N PRO D 37 -184.709 -2.992 49.424 1.00276.30 ATOM 9 CA PRO D 37 -185.529 -2.597 48.269 1.00283.90 ATOM 10 C PRO D 37 -184.884 -1.486 47.440 1.00284.99 ATOM 11 O PRO D 37 -184.874 -0.328 47.859 1.00283.68 ATOM 12 CB PRO D 37 -186.822 -2.091 48.915 1.00289.02 ATOM 13 CG PRO D 37 -186.407 -1.626 50.262 1.00287.33 ATOM 14 CD PRO D 37 -185.314 -2.562 50.698 1.00282.00 ATOM 15 N ALA D 38 -184.360 -1.847 46.271 1.00272.75 ATOM 16 CA ALA D 38 -183.665 -0.900 45.402 1.00269.40 ATOM 17 C ALA D 38 -184.607 -0.210 44.420 1.00264.90 ATOM 18 O ALA D 38 -185.036 -0.809 43.434 1.00267.42 ATOM 19 CB ALA D 38 -182.540 -1.601 44.649 1.00267.90 ATOM 20 N ARG D 39 -184.920 1.052 44.695 1.00206.27 ATOM 21 CA ARG D 39 -185.744 1.852 43.798 1.00197.14 ATOM 22 C ARG D 39 -184.916 2.375 42.622 1.00204.07 ATOM 23 O ARG D 39 -183.865 2.988 42.818 1.00201.44 ATOM 24 CB ARG D 39 -186.384 3.017 44.559 1.00187.27 ATOM 25 CG ARG D 39 -187.329 2.589 45.666 1.00184.48 ATOM 26 CD ARG D 39 -187.707 3.764 46.558 1.00180.58 ATOM 27 NE ARG D 39 -188.334 4.850 45.811 1.00180.09 ATOM 28 CZ ARG D 39 -188.746 5.992 46.356 1.00177.29 ATOM 29 NH1 ARG D 39 -188.597 6.205 47.657 1.00173.16 ATOM 30 NH2 ARG D 39 -189.306 6.925 45.598 1.00177.49 ATOM 31 N ILE D 40 -185.397 2.127 41.405 1.00242.49 ATOM 32 CA ILE D 40 -184.745 2.618 40.191 1.00247.70 ATOM 33 C ILE D 40 -185.500 3.811 39.599 1.00255.90 ATOM 34 O ILE D 40 -186.362 3.643 38.734 1.00254.29 ATOM 35 CB ILE D 40 -184.627 1.509 39.122 1.00245.80 ATOM 36 CG1 ILE D 40 -183.699 0.394 39.607 1.00245.64 ATOM 37 CG2 ILE D 40 -184.123 2.079 37.803 1.00252.52 ATOM 38 CD1 ILE D 40 -184.333 -0.547 40.601 1.00244.75 ATOM 39 N ILE D 41 -185.174 5.011 40.072 1.00294.83 ATOM 40 CA ILE D 41 -185.820 6.234 39.600 1.00295.98 ATOM 41 C ILE D 41 -185.272 6.640 38.234 1.00300.02 ATOM 42 O ILE D 41 -184.979 7.814 38.003 1.00299.61 ATOM 43 CB ILE D 41 -185.604 7.412 40.584 1.00296.36 ATOM 44 CG1 ILE D 41 -185.569 6.922 42.035 1.00294.34 ATOM 45 CG2 ILE D 41 -186.678 8.481 40.396 1.00295.74 ATOM 46 CD1 ILE D 41 -186.934 6.793 42.677 1.00292.43 ATOM 47 N CYS D 42 -185.130 5.672 37.332 1.00314.71 ATOM 48 CA CYS D 42 -184.516 5.934 36.033 1.00314.91 ATOM 49 C CYS D 42 -185.142 7.142 35.337 1.00306.96 ATOM 50 O CYS D 42 -186.362 7.249 35.222 1.00309.10 ATOM 51 CB CYS D 42 -184.563 4.692 35.133 1.00312.89 ATOM 52 SG CYS D 42 -186.212 4.133 34.656 1.00310.02 ATOM 53 N GLY D 43 -184.286 8.053 34.886 1.00217.54 ATOM 54 CA GLY D 43 -184.714 9.288 34.261 1.00203.18 ATOM 55 C GLY D 43 -185.351 9.105 32.899 1.00205.78 ATOM 56 O GLY D 43 -184.663 8.874 31.895 1.00198.18 ATOM 57 N CYS D 44 -186.678 9.213 32.884 1.00288.84 ATOM 58 CA CYS D 44 -187.486 9.197 31.668 1.00295.59 ATOM 59 C CYS D 44 -188.946 8.989 32.055 1.00297.27 ATOM 60 O CYS D 44 -189.852 9.205 31.250 1.00299.22 ATOM 61 CB CYS D 44 -187.029 8.106 30.696 1.00298.29 ATOM 62 SG CYS D 44 -187.298 6.412 31.261 1.00299.64 ATOM 63 N GLY D 45 -189.160 8.567 33.298 1.00274.43 ATOM 64 CA GLY D 45 -190.496 8.358 33.826 1.00273.93 ATOM 65 C GLY D 45 -190.757 6.928 34.261 1.00272.61 ATOM 66 O GLY D 45 -191.437 6.178 33.561 1.00272.93 ATOM 67 N ASN D 46 -190.218 6.552 35.419 1.00264.88 ATOM 68 CA ASN D 46 -190.420 5.214 35.973 1.00263.93 ATOM 69 C ASN D 46 -189.633 5.001 37.271 1.00265.02 ATOM 70 O ASN D 46 -188.604 5.642 37.491 1.00267.79 ATOM 71 CB ASN D 46 -190.057 4.143 34.939 1.00263.85 ATOM 72 CG ASN D 46 -190.641 2.784 35.273 1.00263.38 ATOM 73 OD1 ASN D 46 -189.933 1.777 35.284 1.00262.49 ATOM 74 ND2 ASN D 46 -191.940 2.751 35.552 1.00262.77 ATOM 75 N VAL D 47 -190.122 4.099 38.123 1.00259.12 ATOM 76 CA VAL D 47 -189.510 3.827 39.427 1.00256.76 ATOM 77 C VAL D 47 -189.734 2.370 39.856 1.00252.56 ATOM 78 O VAL D 47 -190.690 2.073 40.575 1.00253.85 ATOM 79 CB VAL D 47 -190.088 4.757 40.531 1.00256.94 ATOM 80 CG1 VAL D 47 -189.490 4.420 41.890 1.00253.09 ATOM 81 CG2 VAL D 47 -189.851 6.223 40.195 1.00258.61 ATOM 82 N ILE D 48 -188.857 1.464 39.422 1.00228.83 ATOM 83 CA ILE D 48 -189.017 0.038 39.725 1.00226.60 ATOM 84 C ILE D 48 -188.460 -0.346 41.098 1.00228.51 ATOM 85 O ILE D 48 -187.268 -0.183 41.360 1.00225.64 ATOM 86 CB ILE D 48 -188.363 -0.877 38.652 1.00221.58 ATOM 87 CG1 ILE D 48 -188.561 -0.313 37.243 1.00217.69 ATOM 88 CG2 ILE D 48 -188.912 -2.294 38.749 1.00217.41 ATOM 89 CD1 ILE D 48 -187.408 0.548 36.762 1.00218.23 ATOM 90 N GLU D 49 -189.330 -0.862 41.964 1.00259.16 ATOM 91 CA GLU D 49 -188.917 -1.350 43.280 1.00263.67 ATOM 92 C GLU D 49 -188.341 -2.764 43.204 1.00268.72 ATOM 93 O GLU D 49 -189.003 -3.737 43.569 1.00267.86 ATOM 94 CB GLU D 49 -190.083 -1.310 44.273 1.00263.94 ATOM 95 CG GLU D 49 -190.321 0.051 44.912 1.00262.58 ATOM 96 CD GLU D 49 -190.818 1.087 43.925 1.00260.57 ATOM 97 OE1 GLU D 49 -190.004 1.918 43.472 1.00257.43 ATOM 98 OE2 GLU D 49 -192.025 1.074 43.604 1.00263.41 ATOM 99 N THR D 50 -187.104 -2.864 42.727 1.00303.74 ATOM 100 CA THR D 50 -186.411 -4.141 42.606 1.00305.00 ATOM 101 C THR D 50 -185.608 -4.426 43.876 1.00300.12 ATOM 102 O THR D 50 -185.662 -3.655 44.832 1.00300.79 ATOM 103 CB THR D 50 -185.466 -4.131 41.388 1.00306.65 ATOM 104 OG1 THR D 50 -186.097 -3.447 40.298 1.00306.74 ATOM 105 CG2 THR D 50 -185.114 -5.547 40.959 1.00304.55 ATOM 106 N TYR D 51 -184.878 -5.539 43.889 1.00225.26 ATOM 107 CA TYR D 51 -183.968 -5.849 44.989 1.00216.35 ATOM 108 C TYR D 51 -182.513 -5.703 44.548 1.00212.61 ATOM 109 O TYR D 51 -182.173 -5.994 43.401 1.00206.32 ATOM 110 CB TYR D 51 -184.212 -7.263 45.521 1.00207.96 ATOM 111 CG TYR D 51 -185.518 -7.438 46.266 1.00207.25 ATOM 112 CD1 TYR D 51 -185.568 -7.346 47.651 1.00205.84 ATOM 113 CD2 TYR D 51 -186.700 -7.704 45.583 1.00208.75 ATOM 114 CE1 TYR D 51 -186.763 -7.511 48.335 1.00205.85 ATOM 115 CE2 TYR D 51 -187.898 -7.870 46.258 1.00205.28 ATOM 116 CZ TYR D 51 -187.926 -7.773 47.633 1.00204.77 ATOM 117 OH TYR D 51 -189.122 -7.939 48.300 1.00203.27 ATOM 118 N SER D 52 -181.662 -5.254 45.468 1.00230.14 ATOM 119 CA SER D 52 -180.239 -5.059 45.196 1.00230.22 ATOM 120 C SER D 52 -179.551 -4.321 46.343 1.00235.54 ATOM 121 O SER D 52 -179.898 -4.509 47.509 1.00233.88 ATOM 122 CB SER D 52 -180.041 -4.275 43.902 1.00230.23 ATOM 123 OG SER D 52 -178.670 -4.228 43.550 1.00232.16 ATOM 124 N THR D 53 -178.572 -3.485 46.001 1.00254.60 ATOM 125 CA THR D 53 -177.864 -2.665 46.984 1.00257.55 ATOM 126 C THR D 53 -178.163 -1.169 46.816 1.00260.38 ATOM 127 O THR D 53 -178.189 -0.653 45.697 1.00261.39 ATOM 128 CB THR D 53 -176.337 -2.896 46.925 1.00255.24 ATOM 129 OG1 THR D 53 -175.842 -2.534 45.630 1.00256.83 ATOM 130 CG2 THR D 53 -176.008 -4.353 47.197 1.00254.26 ATOM 131 N LYS D 54 -178.373 -0.482 47.938 1.00272.64 ATOM 132 CA LYS D 54 -178.733 0.941 47.960 1.00272.43 ATOM 133 C LYS D 54 -180.087 1.219 47.308 1.00273.12 ATOM 134 O LYS D 54 -180.222 1.120 46.089 1.00273.24 ATOM 135 CB LYS D 54 -177.657 1.802 47.291 1.00271.68 ATOM 136 CG LYS D 54 -176.259 1.638 47.858 1.00272.19 ATOM 137 CD LYS D 54 -175.511 0.531 47.142 1.00272.07 ATOM 138 CE LYS D 54 -174.101 0.380 47.674 1.00273.23 ATOM 139 NZ LYS D 54 -173.408 -0.758 47.015 1.00274.22 ATOM 140 N PRO D 55 -181.096 1.578 48.121 1.00273.85 ATOM 141 CA PRO D 55 -182.423 1.923 47.599 1.00273.76 ATOM 142 C PRO D 55 -182.389 3.139 46.672 1.00270.10 ATOM 143 O PRO D 55 -183.292 3.302 45.850 1.00267.53 ATOM 144 CB PRO D 55 -183.224 2.242 48.865 1.00272.55 ATOM 145 CG PRO D 55 -182.541 1.479 49.941 1.00272.22 ATOM 146 CD PRO D 55 -181.081 1.538 49.593 1.00272.90 ATOM 147 N GLU D 56 -181.367 3.980 46.807 1.00257.48 ATOM 148 CA GLU D 56 -181.210 5.145 45.936 1.00254.53 ATOM 149 C GLU D 56 -180.463 4.810 44.643 1.00252.80 ATOM 150 O GLU D 56 -179.273 5.096 44.509 1.00251.04 ATOM 151 CB GLU D 56 -180.505 6.286 46.676 1.00254.29 ATOM 152 CG GLU D 56 -181.419 7.123 47.565 1.00252.28 ATOM 153 CD GLU D 56 -182.303 8.071 46.773 1.00252.29 ATOM 154 OE1 GLU D 56 -182.226 8.061 45.527 1.00254.68 ATOM 155 OE2 GLU D 56 -183.074 8.830 47.397 1.00250.10 ATOM 156 N ILE D 57 -181.173 4.204 43.695 1.00248.41 ATOM 157 CA ILE D 57 -180.598 3.858 42.398 1.00249.67 ATOM 158 C ILE D 57 -181.017 4.857 41.318 1.00253.63 ATOM 159 O ILE D 57 -182.059 4.699 40.682 1.00254.44 ATOM 160 CB ILE D 57 -181.003 2.430 41.966 1.00246.68 ATOM 161 CG1 ILE D 57 -180.485 1.401 42.971 1.00246.20 ATOM 162 CG2 ILE D 57 -180.470 2.114 40.583 1.00248.76 ATOM 163 CD1 ILE D 57 -178.981 1.405 43.117 1.00247.46 ATOM 164 N TYR D 58 -180.203 5.891 41.122 1.00281.43 ATOM 165 CA TYR D 58 -180.459 6.880 40.081 1.00286.76 ATOM 166 C TYR D 58 -180.064 6.321 38.720 1.00291.56 ATOM 167 O TYR D 58 -178.941 5.853 38.539 1.00289.94 ATOM 168 CB TYR D 58 -179.676 8.166 40.355 1.00286.77 ATOM 169 CG TYR D 58 -180.005 8.834 41.673 1.00286.07 ATOM 170 CD1 TYR D 58 -179.519 8.328 42.871 1.00284.36 ATOM 171 CD2 TYR D 58 -180.788 9.981 41.717 1.00284.66 ATOM 172 CE1 TYR D 58 -179.812 8.936 44.075 1.00283.40 ATOM 173 CE2 TYR D 58 -181.086 10.597 42.917 1.00283.88 ATOM 174 CZ TYR D 58 -180.594 10.069 44.093 1.00284.10 ATOM 175 OH TYR D 58 -180.886 10.675 45.292 1.00284.79 ATOM 176 N VAL D 59 -180.984 6.376 37.762 1.00356.93 ATOM 177 CA VAL D 59 -180.729 5.834 36.430 1.00356.67 ATOM 178 C VAL D 59 -181.318 6.741 35.351 1.00353.24 ATOM 179 O VAL D 59 -181.693 7.880 35.627 1.00354.73 ATOM 180 CB VAL D 59 -181.304 4.408 36.274 1.00361.08 ATOM 181 CG1 VAL D 59 -180.647 3.687 35.103 1.00360.64 ATOM 182 CG2 VAL D 59 -181.102 3.614 37.550 1.00362.06 ATOM 183 N GLU D 60 -181.391 6.228 34.126 1.00253.02 ATOM 184 CA GLU D 60 -181.875 6.995 32.984 1.00242.27 ATOM 185 C GLU D 60 -181.923 6.126 31.733 1.00240.11 ATOM 186 O GLU D 60 -181.098 5.227 31.562 1.00239.98 ATOM 187 CB GLU D 60 -180.980 8.211 32.736 1.00235.06 ATOM 188 CG GLU D 60 -179.543 7.864 32.381 1.00234.61 ATOM 189 CD GLU D 60 -178.895 6.948 33.403 1.00239.59 ATOM 190 OE1 GLU D 60 -178.316 7.460 34.384 1.00240.10 ATOM 191 OE2 GLU D 60 -178.975 5.712 33.230 1.00239.73 ATOM 192 N VAL D 61 -182.897 6.398 30.869 1.00256.81 ATOM 193 CA VAL D 61 -183.038 5.694 29.596 1.00261.54 ATOM 194 C VAL D 61 -183.059 4.169 29.760 1.00258.38 ATOM 195 O VAL D 61 -182.313 3.454 29.088 1.00261.52 ATOM 196 CB VAL D 61 -181.928 6.102 28.598 1.00263.04 ATOM 197 CG1 VAL D 61 -182.292 5.668 27.186 1.00264.37 ATOM 198 CG2 VAL D 61 -181.704 7.603 28.642 1.00262.39 ATOM 199 N CYS D 62 -183.913 3.679 30.657 1.00208.65 ATOM 200 CA CYS D 62 -184.058 2.239 30.881 1.00199.33 ATOM 201 C CYS D 62 -184.961 1.555 29.842 1.00198.49 ATOM 202 O CYS D 62 -184.799 1.755 28.638 1.00200.56 ATOM 203 CB CYS D 62 -184.548 1.964 32.307 1.00195.93 ATOM 204 SG CYS D 62 -185.762 3.151 32.934 1.00203.20 ATOM 205 N SER D 63 -185.896 0.734 30.308 1.00210.43 ATOM 206 CA SER D 63 -186.823 0.046 29.412 1.00210.12 ATOM 207 C SER D 63 -188.064 0.889 29.114 1.00220.75 ATOM 208 O SER D 63 -188.738 0.685 28.101 1.00216.43 ATOM 209 CB SER D 63 -187.239 -1.301 30.003 1.00208.12 ATOM 210 OG SER D 63 -188.087 -1.127 31.126 1.00209.11 ATOM 211 N LYS D 64 -188.364 1.832 30.004 1.00293.88 ATOM 212 CA LYS D 64 -189.540 2.689 29.859 1.00302.75 ATOM 213 C LYS D 64 -189.394 3.681 28.701 1.00306.19 ATOM 214 O LYS D 64 -190.369 4.309 28.287 1.00309.47 ATOM 215 CB LYS D 64 -189.820 3.438 31.169 1.00305.22 ATOM 216 CG LYS D 64 -191.155 4.175 31.209 1.00307.94 ATOM 217 CD LYS D 64 -192.223 3.375 31.945 1.00308.48 ATOM 218 CE LYS D 64 -192.536 2.063 31.243 1.00308.79 ATOM 219 NZ LYS D 64 -193.569 1.276 31.971 1.00308.49 ATOM 220 N CYS D 65 -188.176 3.811 28.179 1.00292.10 ATOM 221 CA CYS D 65 -187.895 4.761 27.103 1.00293.06 ATOM 222 C CYS D 65 -186.586 4.456 26.373 1.00290.87 ATOM 223 O CYS D 65 -186.587 3.909 25.268 1.00291.43 ATOM 224 CB CYS D 65 -187.881 6.196 27.646 1.00295.34 ATOM 225 SG CYS D 65 -187.041 6.409 29.243 1.00296.40 ATOM 226 OXT CYS D 65 -185.495 4.746 26.863 1.00290.24 TER