HEADER RIBOSOME 17-NOV-11 4V89 TITLE Crystal Structure of Release Factor RF3 Trapped in the GTP State on a TITLE 2 Rotated Conformation of the Ribosome (without viomycin) COMPND MOL_ID: 42; COMPND 2 MOLECULE: 50S ribosomal protein L7/L12; COMPND 3 CHAIN: BJ, BK, BL, BM; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.70 ANGSTORMS DBREF 4V89 B 0 120 UNP P0A7K2 RL7_ECOLI 1 121 SEQRES 1 BK 30 SER ILE THR LYS ASP GLN ILE ILE GLU ALA VAL ALA ALA SEQRES 2 BK 30 MET SER VAL MET ASP VAL VAL GLU LEU ILE SER ALA MET SEQRES 3 BK 30 GLU GLU LYS PHE ATOM 1 N SER B 1 -262.760 37.621 -72.299 1.00219.88 ATOM 2 CA SER B 1 -261.776 36.631 -72.722 1.00230.58 ATOM 3 C SER B 1 -261.456 35.630 -71.610 1.00263.87 ATOM 4 O SER B 1 -261.557 35.949 -70.425 1.00252.05 ATOM 5 CB SER B 1 -260.498 37.318 -73.213 1.00205.12 ATOM 6 OG SER B 1 -260.752 38.111 -74.362 1.00170.18 ATOM 7 N ILE B 2 -261.073 34.418 -72.008 1.00334.66 ATOM 8 CA ILE B 2 -260.771 33.338 -71.069 1.00348.35 ATOM 9 C ILE B 2 -259.500 33.630 -70.265 1.00325.13 ATOM 10 O ILE B 2 -258.451 33.912 -70.840 1.00321.81 ATOM 11 CB ILE B 2 -260.611 31.979 -71.804 1.00356.52 ATOM 12 CG1 ILE B 2 -261.889 31.619 -72.568 1.00368.73 ATOM 13 CG2 ILE B 2 -260.246 30.872 -70.826 1.00344.06 ATOM 14 CD1 ILE B 2 -261.819 30.285 -73.289 1.00342.65 ATOM 15 N THR B 3 -259.601 33.551 -68.940 1.00300.92 ATOM 16 CA THR B 3 -258.481 33.849 -68.045 1.00283.77 ATOM 17 C THR B 3 -257.338 32.840 -68.178 1.00282.24 ATOM 18 O THR B 3 -256.162 33.197 -68.048 1.00274.49 ATOM 19 CB THR B 3 -258.936 33.890 -66.573 1.00263.02 ATOM 20 OG1 THR B 3 -259.494 32.621 -66.208 1.00261.91 ATOM 21 CG2 THR B 3 -259.983 34.980 -66.362 1.00251.36 ATOM 22 N LYS B 4 -257.699 31.585 -68.438 1.00287.26 ATOM 23 CA LYS B 4 -256.737 30.489 -68.552 1.00282.61 ATOM 24 C LYS B 4 -255.668 30.772 -69.616 1.00286.87 ATOM 25 O LYS B 4 -254.467 30.668 -69.346 1.00279.26 ATOM 26 CB LYS B 4 -257.470 29.171 -68.847 1.00253.61 ATOM 27 CG LYS B 4 -258.539 28.797 -67.817 1.00227.32 ATOM 28 CD LYS B 4 -259.332 27.566 -68.243 1.00211.88 ATOM 29 CE LYS B 4 -260.423 27.231 -67.235 1.00195.82 ATOM 30 NZ LYS B 4 -261.268 26.081 -67.666 1.00191.37 ATOM 31 N ASP B 5 -256.113 31.146 -70.814 1.00294.19 ATOM 32 CA ASP B 5 -255.211 31.506 -71.908 1.00290.70 ATOM 33 C ASP B 5 -254.413 32.775 -71.586 1.00278.34 ATOM 34 O ASP B 5 -253.234 32.892 -71.940 1.00271.37 ATOM 35 CB ASP B 5 -255.994 31.694 -73.215 1.00288.80 ATOM 36 CG ASP B 5 -256.751 30.442 -73.636 1.00288.50 ATOM 37 OD1 ASP B 5 -256.129 29.539 -74.236 1.00275.66 ATOM 38 OD2 ASP B 5 -257.973 30.368 -73.382 1.00293.11 ATOM 39 N GLN B 6 -255.068 33.719 -70.914 1.00273.87 ATOM 40 CA GLN B 6 -254.437 34.969 -70.494 1.00262.93 ATOM 41 C GLN B 6 -253.270 34.708 -69.543 1.00261.25 ATOM 42 O GLN B 6 -252.297 35.463 -69.517 1.00250.26 ATOM 43 CB GLN B 6 -255.470 35.893 -69.834 1.00252.70 ATOM 44 CG GLN B 6 -256.551 36.388 -70.790 1.00245.53 ATOM 45 CD GLN B 6 -257.686 37.116 -70.089 1.00240.95 ATOM 46 OE1 GLN B 6 -257.952 36.892 -68.908 1.00237.24 ATOM 47 NE2 GLN B 6 -258.364 37.992 -70.819 1.00229.30 ATOM 48 N ILE B 7 -253.382 33.637 -68.761 1.00273.23 ATOM 49 CA ILE B 7 -252.297 33.193 -67.887 1.00276.70 ATOM 50 C ILE B 7 -251.238 32.391 -68.661 1.00273.61 ATOM 51 O ILE B 7 -250.027 32.551 -68.431 1.00277.28 ATOM 52 CB ILE B 7 -252.845 32.371 -66.693 1.00290.96 ATOM 53 CG1 ILE B 7 -253.874 33.192 -65.915 1.00283.76 ATOM 54 CG2 ILE B 7 -251.724 31.922 -65.769 1.00298.53 ATOM 55 CD1 ILE B 7 -253.403 34.587 -65.568 1.00250.93 ATOM 56 N ILE B 8 -251.707 31.539 -69.577 1.00273.11 ATOM 57 CA ILE B 8 -250.839 30.711 -70.428 1.00264.95 ATOM 58 C ILE B 8 -249.878 31.553 -71.283 1.00259.26 ATOM 59 O ILE B 8 -248.730 31.161 -71.517 1.00258.96 ATOM 60 CB ILE B 8 -251.672 29.762 -71.348 1.00251.92 ATOM 61 CG1 ILE B 8 -252.409 28.697 -70.528 1.00241.31 ATOM 62 CG2 ILE B 8 -250.796 29.095 -72.396 1.00235.92 ATOM 63 CD1 ILE B 8 -251.513 27.808 -69.698 1.00201.95 ATOM 64 N GLU B 9 -250.343 32.721 -71.724 1.00254.97 ATOM 65 CA GLU B 9 -249.530 33.615 -72.552 1.00242.16 ATOM 66 C GLU B 9 -248.615 34.505 -71.704 1.00235.44 ATOM 67 O GLU B 9 -247.869 35.338 -72.227 1.00224.54 ATOM 68 CB GLU B 9 -250.430 34.457 -73.458 1.00235.63 ATOM 69 CG GLU B 9 -251.356 33.622 -74.338 1.00229.30 ATOM 70 CD GLU B 9 -252.336 34.462 -75.133 1.00232.26 ATOM 71 OE1 GLU B 9 -251.895 35.410 -75.814 1.00237.38 ATOM 72 OE2 GLU B 9 -253.551 34.173 -75.077 1.00232.46 ATOM 73 N ALA B 10 -248.680 34.308 -70.391 1.00237.47 ATOM 74 CA ALA B 10 -247.896 35.078 -69.431 1.00231.38 ATOM 75 C ALA B 10 -246.804 34.240 -68.757 1.00257.58 ATOM 76 O ALA B 10 -245.619 34.556 -68.879 1.00251.33 ATOM 77 CB ALA B 10 -248.808 35.711 -68.388 1.00212.56 ATOM 78 N VAL B 11 -247.216 33.181 -68.052 1.00284.98 ATOM 79 CA VAL B 11 -246.328 32.402 -67.165 1.00302.30 ATOM 80 C VAL B 11 -244.935 32.028 -67.703 1.00310.23 ATOM 81 O VAL B 11 -243.920 32.437 -67.136 1.00312.30 ATOM 82 CB VAL B 11 -247.011 31.113 -66.643 1.00304.82 ATOM 83 CG1 VAL B 11 -246.024 30.270 -65.844 1.00308.31 ATOM 84 CG2 VAL B 11 -248.215 31.452 -65.791 1.00304.75 ATOM 85 N ALA B 12 -244.890 31.241 -68.775 1.00318.83 ATOM 86 CA ALA B 12 -243.635 30.661 -69.261 1.00318.27 ATOM 87 C ALA B 12 -242.883 31.566 -70.237 1.00307.36 ATOM 88 O ALA B 12 -241.862 31.172 -70.804 1.00311.77 ATOM 89 CB ALA B 12 -243.889 29.296 -69.893 1.00306.66 ATOM 90 N ALA B 13 -243.384 32.784 -70.415 1.00281.20 ATOM 91 CA ALA B 13 -242.803 33.733 -71.357 1.00266.02 ATOM 92 C ALA B 13 -241.449 34.230 -70.871 1.00277.26 ATOM 93 O ALA B 13 -240.935 33.772 -69.850 1.00278.80 ATOM 94 CB ALA B 13 -243.745 34.907 -71.575 1.00237.88 ATOM 95 N MET B 14 -240.871 35.166 -71.613 1.00292.68 ATOM 96 CA MET B 14 -239.530 35.658 -71.317 1.00300.13 ATOM 97 C MET B 14 -239.564 37.002 -70.576 1.00308.82 ATOM 98 O MET B 14 -240.474 37.809 -70.767 1.00301.94 ATOM 99 CB MET B 14 -238.691 35.732 -72.594 1.00280.62 ATOM 100 CG MET B 14 -238.635 34.418 -73.385 1.00270.70 ATOM 101 SD MET B 14 -237.662 33.093 -72.622 1.00263.33 ATOM 102 CE MET B 14 -238.932 32.082 -71.871 1.00260.41 ATOM 103 N SER B 15 -238.566 37.211 -69.721 1.00329.99 ATOM 104 CA SER B 15 -238.601 38.228 -68.666 1.00322.23 ATOM 105 C SER B 15 -238.480 39.709 -69.063 1.00305.01 ATOM 106 O SER B 15 -239.035 40.572 -68.379 1.00311.12 ATOM 107 CB SER B 15 -237.563 37.888 -67.596 1.00320.42 ATOM 108 OG SER B 15 -236.308 37.592 -68.187 1.00317.33 ATOM 109 N VAL B 16 -237.746 40.013 -70.131 1.00276.31 ATOM 110 CA VAL B 16 -237.647 41.390 -70.615 1.00254.42 ATOM 111 C VAL B 16 -239.029 41.889 -71.015 1.00259.82 ATOM 112 O VAL B 16 -239.488 42.953 -70.564 1.00257.70 ATOM 113 CB VAL B 16 -236.725 41.495 -71.844 1.00219.01 ATOM 114 CG1 VAL B 16 -236.684 42.930 -72.350 1.00200.88 ATOM 115 CG2 VAL B 16 -235.329 40.994 -71.511 1.00212.60 ATOM 116 N MET B 17 -239.684 41.094 -71.860 1.00261.66 ATOM 117 CA MET B 17 -241.069 41.316 -72.262 1.00265.45 ATOM 118 C MET B 17 -241.952 41.542 -71.047 1.00284.87 ATOM 119 O MET B 17 -242.867 42.360 -71.085 1.00280.60 ATOM 120 CB MET B 17 -241.603 40.119 -73.057 1.00253.80 ATOM 121 CG MET B 17 -241.425 40.210 -74.568 1.00232.53 ATOM 122 SD MET B 17 -242.434 41.480 -75.368 1.00210.32 ATOM 123 CE MET B 17 -244.018 41.222 -74.575 1.00223.67 ATOM 124 N ASP B 18 -241.674 40.805 -69.974 1.00319.59 ATOM 125 CA ASP B 18 -242.400 40.975 -68.721 1.00335.69 ATOM 126 C ASP B 18 -242.152 42.367 -68.123 1.00321.85 ATOM 127 O ASP B 18 -243.105 43.075 -67.821 1.00326.63 ATOM 128 CB ASP B 18 -242.057 39.860 -67.721 1.00341.46 ATOM 129 CG ASP B 18 -242.316 38.468 -68.283 1.00346.87 ATOM 130 OD1 ASP B 18 -243.169 38.333 -69.187 1.00340.01 ATOM 131 OD2 ASP B 18 -241.667 37.507 -67.818 1.00347.27 ATOM 132 N VAL B 19 -240.887 42.771 -67.987 1.00300.34 ATOM 133 CA VAL B 19 -240.549 44.070 -67.384 1.00287.32 ATOM 134 C VAL B 19 -241.138 45.254 -68.160 1.00275.48 ATOM 135 O VAL B 19 -241.742 46.177 -67.571 1.00269.44 ATOM 136 CB VAL B 19 -239.012 44.244 -67.233 1.00273.63 ATOM 137 CG1 VAL B 19 -238.633 45.716 -67.120 1.00267.67 ATOM 138 CG2 VAL B 19 -238.517 43.478 -66.027 1.00266.01 ATOM 139 N VAL B 20 -240.972 45.206 -69.482 1.00264.60 ATOM 140 CA VAL B 20 -241.559 46.209 -70.366 1.00244.52 ATOM 141 C VAL B 20 -243.073 46.319 -70.147 1.00251.81 ATOM 142 O VAL B 20 -243.653 47.393 -70.299 1.00234.85 ATOM 143 CB VAL B 20 -241.251 45.892 -71.855 1.00218.15 ATOM 144 CG1 VAL B 20 -241.775 46.998 -72.761 1.00190.95 ATOM 145 CG2 VAL B 20 -239.753 45.709 -72.056 1.00199.89 ATOM 146 N GLU B 21 -243.702 45.207 -69.766 1.00279.94 ATOM 147 CA GLU B 21 -245.133 45.197 -69.473 1.00294.20 ATOM 148 C GLU B 21 -245.431 45.757 -68.076 1.00288.06 ATOM 149 O GLU B 21 -246.448 46.420 -67.872 1.00288.47 ATOM 150 CB GLU B 21 -245.716 43.786 -69.640 1.00310.76 ATOM 151 CG GLU B 21 -245.829 43.320 -71.092 1.00309.84 ATOM 152 CD GLU B 21 -245.924 41.806 -71.220 1.00317.32 ATOM 153 OE1 GLU B 21 -245.410 41.095 -70.330 1.00321.63 ATOM 154 OE2 GLU B 21 -246.510 41.326 -72.214 1.00317.80 ATOM 155 N LEU B 22 -244.536 45.491 -67.125 1.00287.80 ATOM 156 CA LEU B 22 -244.691 45.948 -65.747 1.00280.74 ATOM 157 C LEU B 22 -244.607 47.471 -65.672 1.00264.07 ATOM 158 O LEU B 22 -245.495 48.124 -65.104 1.00266.96 ATOM 159 CB LEU B 22 -243.631 45.315 -64.831 1.00270.16 ATOM 160 CG LEU B 22 -243.707 43.828 -64.466 1.00264.04 ATOM 161 CD1 LEU B 22 -242.448 43.412 -63.719 1.00256.39 ATOM 162 CD2 LEU B 22 -244.948 43.517 -63.636 1.00261.87 ATOM 163 N ILE B 23 -243.549 48.039 -66.250 1.00253.65 ATOM 164 CA ILE B 23 -243.398 49.498 -66.219 1.00242.80 ATOM 165 C ILE B 23 -244.590 50.220 -66.875 1.00242.85 ATOM 166 O ILE B 23 -245.171 51.134 -66.280 1.00239.23 ATOM 167 CB ILE B 23 -242.038 49.965 -66.802 1.00221.34 ATOM 168 CG1 ILE B 23 -240.906 49.644 -65.819 1.00198.18 ATOM 169 CG2 ILE B 23 -242.054 51.460 -67.083 1.00211.87 ATOM 170 CD1 ILE B 23 -241.027 50.354 -64.479 1.00166.37 ATOM 171 N SER B 24 -244.981 49.786 -68.072 1.00241.20 ATOM 172 CA SER B 24 -246.159 50.348 -68.734 1.00225.02 ATOM 173 C SER B 24 -247.449 50.039 -67.969 1.00244.47 ATOM 174 O SER B 24 -248.470 50.686 -68.190 1.00244.94 ATOM 175 CB SER B 24 -246.264 49.858 -70.179 1.00207.39 ATOM 176 OG SER B 24 -246.320 48.446 -70.236 1.00228.83 ATOM 177 N ALA B 25 -247.399 49.045 -67.081 1.00257.90 ATOM 178 CA ALA B 25 -248.528 48.736 -66.201 1.00263.56 ATOM 179 C ALA B 25 -248.570 49.655 -64.984 1.00264.20 ATOM 180 O ALA B 25 -249.615 49.805 -64.351 1.00270.40 ATOM 181 CB ALA B 25 -248.501 47.281 -65.763 1.00257.06 ATOM 182 N MET B 26 -247.427 50.250 -64.647 1.00258.89 ATOM 183 CA MET B 26 -247.368 51.223 -63.552 1.00253.91 ATOM 184 C MET B 26 -247.921 52.594 -63.960 1.00250.28 ATOM 185 O MET B 26 -248.005 53.511 -63.141 1.00244.54 ATOM 186 CB MET B 26 -245.938 51.365 -63.012 1.00246.87 ATOM 187 CG MET B 26 -245.442 50.172 -62.202 1.00245.47 ATOM 188 SD MET B 26 -243.829 50.467 -61.437 1.00231.34 ATOM 189 CE MET B 26 -244.198 51.876 -60.395 1.00222.96 ATOM 190 N GLU B 27 -248.278 52.724 -65.234 1.00251.43 ATOM 191 CA GLU B 27 -248.726 53.990 -65.816 1.00250.80 ATOM 192 C GLU B 27 -250.239 54.066 -66.028 1.00262.75 ATOM 193 O GLU B 27 -250.906 54.959 -65.500 1.00263.24 ATOM 194 CB GLU B 27 -247.998 54.245 -67.135 1.00239.74 ATOM 195 CG GLU B 27 -246.491 54.328 -66.981 1.00233.65 ATOM 196 CD GLU B 27 -245.787 54.621 -68.288 1.00220.55 ATOM 197 OE1 GLU B 27 -246.474 54.721 -69.326 1.00222.95 ATOM 198 OE2 GLU B 27 -244.546 54.753 -68.276 1.00213.04 ATOM 199 N GLU B 28 -250.750 53.141 -66.836 1.00265.53 ATOM 200 CA GLU B 28 -252.161 53.064 -67.209 1.00274.51 ATOM 201 C GLU B 28 -253.121 53.282 -66.036 1.00285.57 ATOM 202 O GLU B 28 -253.833 54.286 -65.988 1.00277.12 ATOM 203 CB GLU B 28 -252.422 51.688 -67.821 1.00270.61 ATOM 204 CG GLU B 28 -251.480 50.625 -67.270 1.00267.64 ATOM 205 CD GLU B 28 -251.994 49.214 -67.434 1.00272.15 ATOM 206 OE1 GLU B 28 -252.178 48.780 -68.590 1.00269.10 ATOM 207 OE2 GLU B 28 -252.204 48.541 -66.402 1.00276.10 ATOM 208 N LYS B 29 -253.130 52.342 -65.094 1.00302.85 ATOM 209 CA LYS B 29 -253.983 52.425 -63.910 1.00304.87 ATOM 210 C LYS B 29 -253.198 52.955 -62.708 1.00295.16 ATOM 211 O LYS B 29 -252.013 53.271 -62.829 1.00297.30 ATOM 212 CB LYS B 29 -254.577 51.050 -63.587 1.00295.24 ATOM 213 CG LYS B 29 -255.483 50.488 -64.674 1.00297.91 ATOM 214 CD LYS B 29 -255.684 48.991 -64.502 1.00303.00 ATOM 215 CE LYS B 29 -256.647 48.436 -65.538 1.00301.79 ATOM 216 NZ LYS B 29 -256.763 46.957 -65.436 1.00300.84 ATOM 217 N PHE B 30 -253.864 53.056 -61.557 1.00272.21 ATOM 218 CA PHE B 30 -253.232 53.508 -60.313 1.00253.49 ATOM 219 C PHE B 30 -252.564 54.884 -60.450 1.00216.53 ATOM 220 O PHE B 30 -252.779 55.606 -61.424 1.00203.29 ATOM 221 CB PHE B 30 -252.229 52.461 -59.792 1.00253.25 ATOM 222 CG PHE B 30 -252.863 51.327 -59.008 1.00253.77 ATOM 223 CD1 PHE B 30 -253.926 51.560 -58.151 1.00253.98 ATOM 224 CD2 PHE B 30 -252.379 50.029 -59.123 1.00257.14 ATOM 225 CE1 PHE B 30 -254.499 50.520 -57.428 1.00251.24 ATOM 226 CE2 PHE B 30 -252.948 48.989 -58.404 1.00254.24 ATOM 227 CZ PHE B 30 -254.007 49.237 -57.556 1.00250.99 TER