HEADER RIBOSOME/ANTIBIOTIC 23-APR-13 4V9J TITLE 70S ribosome translocation intermediate GDPNP-II containing TITLE 2 elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state. COMPND MOL_ID: 47; COMPND 2 MOLECULE: 50S ribosomal protein L31; COMPND 3 CHAIN: B4, D4; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.86 ANGSTORMS DBREF 4V9J B 1 35 UNP Q72JR0 RL31_THET2 1 35 SEQRES 1 B4 35 MET LYS GLU GLY ILE HIS PRO LYS LEU VAL PRO ALA ARG SEQRES 2 B4 35 ILE ILE CYS GLY CYS GLY ASN VAL ILE GLU THR TYR SER SEQRES 3 B4 35 THR LYS PRO GLU ILE TYR VAL GLU VAL ATOM 1 N MET B 1 84.696-155.536 2.428 1.00130.65 ATOM 2 CA MET B 1 84.387-154.121 2.594 1.00131.49 ATOM 3 C MET B 1 83.428-153.650 1.521 1.00131.30 ATOM 4 O MET B 1 83.667-152.643 0.859 1.00131.16 ATOM 5 CB MET B 1 85.663-153.281 2.559 1.00132.91 ATOM 6 CG MET B 1 86.651-153.643 3.643 1.00135.19 ATOM 7 SD MET B 1 87.844-154.891 3.124 1.00138.59 ATOM 8 CE MET B 1 88.404-155.495 4.716 1.00136.46 ATOM 9 N LYS B 2 82.345-154.396 1.348 1.00 90.51 ATOM 10 CA LYS B 2 81.331-154.032 0.378 1.00 90.48 ATOM 11 C LYS B 2 80.382-153.016 0.994 1.00 90.54 ATOM 12 O LYS B 2 80.638-151.813 0.946 1.00 90.65 ATOM 13 CB LYS B 2 80.571-155.270 -0.096 1.00 90.34 ATOM 14 CG LYS B 2 81.474-156.361 -0.665 1.00 90.27 ATOM 15 CD LYS B 2 82.395-155.826 -1.755 1.00 90.31 ATOM 16 CE LYS B 2 81.699-155.759 -3.106 1.00 90.26 ATOM 17 NZ LYS B 2 81.420-157.113 -3.666 1.00 90.13 ATOM 18 N GLU B 3 79.300-153.510 1.588 1.00 92.61 ATOM 19 CA GLU B 3 78.305-152.661 2.244 1.00 92.66 ATOM 20 C GLU B 3 77.846-151.474 1.395 1.00 92.71 ATOM 21 O GLU B 3 77.729-151.579 0.173 1.00 92.67 ATOM 22 CB GLU B 3 78.809-152.179 3.610 1.00 92.75 ATOM 23 CG GLU B 3 78.670-153.211 4.722 1.00 92.70 ATOM 24 CD GLU B 3 77.222-153.478 5.108 1.00 92.64 ATOM 25 OE1 GLU B 3 76.970-154.478 5.815 1.00 92.58 ATOM 26 OE2 GLU B 3 76.336-152.690 4.715 1.00 92.66 ATOM 27 N GLY B 4 77.598-150.346 2.053 1.00163.77 ATOM 28 CA GLY B 4 77.063-149.177 1.382 1.00164.38 ATOM 29 C GLY B 4 78.020-148.003 1.302 1.00164.86 ATOM 30 O GLY B 4 78.692-147.804 0.289 1.00165.78 ATOM 31 N ILE B 5 78.083-147.221 2.374 1.00172.03 ATOM 32 CA ILE B 5 78.830-145.965 2.364 1.00170.80 ATOM 33 C ILE B 5 80.286-146.096 2.816 1.00170.33 ATOM 34 O ILE B 5 80.769-145.289 3.612 1.00170.67 ATOM 35 CB ILE B 5 78.122-144.883 3.216 1.00171.40 ATOM 36 CG1 ILE B 5 77.833-145.406 4.626 1.00171.76 ATOM 37 CG2 ILE B 5 76.825-144.439 2.546 1.00171.28 ATOM 38 CD1 ILE B 5 77.497-144.312 5.623 1.00171.91 ATOM 39 N HIS B 6 80.986-147.099 2.297 1.00118.98 ATOM 40 CA HIS B 6 82.392-147.287 2.637 1.00118.93 ATOM 41 C HIS B 6 83.272-146.156 2.093 1.00118.95 ATOM 42 O HIS B 6 83.215-145.835 0.904 1.00119.00 ATOM 43 CB HIS B 6 82.886-148.662 2.181 1.00118.90 ATOM 44 CG HIS B 6 83.040-149.641 3.303 1.00118.83 ATOM 45 ND1 HIS B 6 84.212-150.326 3.542 1.00118.78 ATOM 46 CD2 HIS B 6 82.174-150.029 4.270 1.00118.81 ATOM 47 CE1 HIS B 6 84.058-151.102 4.600 1.00118.72 ATOM 48 NE2 HIS B 6 82.830-150.942 5.060 1.00118.74 ATOM 49 N PRO B 7 84.092-145.555 2.977 1.00173.81 ATOM 50 CA PRO B 7 84.871-144.314 2.804 1.00173.48 ATOM 51 C PRO B 7 85.824-144.243 1.596 1.00172.57 ATOM 52 O PRO B 7 86.696-143.365 1.587 1.00172.32 ATOM 53 CB PRO B 7 85.678-144.227 4.107 1.00173.34 ATOM 54 CG PRO B 7 84.878-145.002 5.098 1.00173.54 ATOM 55 CD PRO B 7 84.278-146.132 4.322 1.00173.10 ATOM 56 N LYS B 8 85.661-145.143 0.624 1.00169.13 ATOM 57 CA LYS B 8 86.442-145.159 -0.627 1.00166.88 ATOM 58 C LYS B 8 87.893-145.677 -0.540 1.00166.27 ATOM 59 O LYS B 8 88.299-146.271 0.461 1.00165.27 ATOM 60 CB LYS B 8 86.405-143.788 -1.314 1.00168.60 ATOM 61 CG LYS B 8 85.375-143.656 -2.421 1.00168.78 ATOM 62 CD LYS B 8 86.057-143.293 -3.735 1.00169.95 ATOM 63 CE LYS B 8 87.054-142.147 -3.552 1.00170.66 ATOM 64 NZ LYS B 8 87.887-141.917 -4.772 1.00171.30 ATOM 65 N LEU B 9 88.655-145.450 -1.612 1.00118.96 ATOM 66 CA LEU B 9 90.043-145.912 -1.720 1.00118.92 ATOM 67 C LEU B 9 90.901-144.900 -2.496 1.00118.95 ATOM 68 O LEU B 9 91.105-143.782 -2.022 1.00118.96 ATOM 69 CB LEU B 9 90.098-147.294 -2.381 1.00118.91 ATOM 70 CG LEU B 9 91.065-148.321 -1.785 1.00118.84 ATOM 71 CD1 LEU B 9 92.456-148.201 -2.394 1.00118.83 ATOM 72 CD2 LEU B 9 91.124-148.171 -0.269 1.00118.79 ATOM 73 N VAL B 10 91.397-145.309 -3.670 1.00137.32 ATOM 74 CA VAL B 10 92.140-144.450 -4.624 1.00136.91 ATOM 75 C VAL B 10 93.647-144.260 -4.302 1.00136.05 ATOM 76 O VAL B 10 94.052-144.382 -3.151 1.00135.93 ATOM 77 CB VAL B 10 91.377-143.098 -4.922 1.00137.53 ATOM 78 CG1 VAL B 10 92.260-141.875 -4.682 1.00137.02 ATOM 79 CG2 VAL B 10 90.794-143.103 -6.340 1.00137.21 ATOM 80 N PRO B 11 94.484-144.022 -5.335 1.00 84.62 ATOM 81 CA PRO B 11 95.934-143.805 -5.167 1.00 84.64 ATOM 82 C PRO B 11 96.342-142.443 -4.573 1.00 84.73 ATOM 83 O PRO B 11 95.529-141.525 -4.522 1.00 84.79 ATOM 84 CB PRO B 11 96.477-143.944 -6.597 1.00 84.68 ATOM 85 CG PRO B 11 95.312-143.642 -7.476 1.00 84.72 ATOM 86 CD PRO B 11 94.128-144.203 -6.754 1.00 84.64 ATOM 87 N ALA B 12 97.599-142.323 -4.134 1.00155.57 ATOM 88 CA ALA B 12 98.095-141.105 -3.464 1.00156.64 ATOM 89 C ALA B 12 99.624-141.036 -3.441 1.00157.54 ATOM 90 O ALA B 12 100.270-142.050 -3.736 1.00158.10 ATOM 91 CB ALA B 12 97.567-141.058 -2.065 1.00155.41 ATOM 92 N ARG B 13 100.220-139.890 -3.062 1.00102.85 ATOM 93 CA ARG B 13 101.662-139.845 -3.192 1.00103.17 ATOM 94 C ARG B 13 102.286-139.793 -1.812 1.00101.53 ATOM 95 O ARG B 13 101.583-139.963 -0.815 1.00102.61 ATOM 96 CB ARG B 13 102.116-138.714 -4.130 1.00103.35 ATOM 97 CG ARG B 13 101.863-138.984 -5.625 1.00104.41 ATOM 98 CD ARG B 13 102.550-140.277 -6.129 1.00105.14 ATOM 99 NE ARG B 13 103.468-140.054 -7.254 1.00104.81 ATOM 100 CZ ARG B 13 103.793-140.971 -8.166 1.00103.97 ATOM 101 NH1 ARG B 13 103.265-142.185 -8.110 1.00103.48 ATOM 102 NH2 ARG B 13 104.638-140.670 -9.145 1.00102.96 ATOM 103 N ILE B 14 103.598-139.611 -1.739 1.00 81.66 ATOM 104 CA ILE B 14 104.229-139.242 -0.476 1.00 81.65 ATOM 105 C ILE B 14 105.360-138.269 -0.805 1.00 81.74 ATOM 106 O ILE B 14 106.537-138.571 -0.611 1.00 81.72 ATOM 107 CB ILE B 14 104.739-140.454 0.376 1.00 81.54 ATOM 108 CG1 ILE B 14 103.790-141.660 0.307 1.00 81.44 ATOM 109 CG2 ILE B 14 104.896-140.037 1.819 1.00 81.53 ATOM 110 CD1 ILE B 14 103.834-142.578 1.523 1.00 81.34 ATOM 111 N ILE B 15 104.984-137.106 -1.336 1.00164.19 ATOM 112 CA ILE B 15 105.948-136.079 -1.725 1.00163.65 ATOM 113 C ILE B 15 106.531-135.430 -0.475 1.00164.21 ATOM 114 O ILE B 15 106.146-134.325 -0.076 1.00164.82 ATOM 115 CB ILE B 15 105.316-134.999 -2.629 1.00163.41 ATOM 116 CG1 ILE B 15 104.341-135.635 -3.624 1.00162.33 ATOM 117 CG2 ILE B 15 106.405-134.204 -3.356 1.00162.50 ATOM 118 CD1 ILE B 15 103.313-134.664 -4.165 1.00161.85 ATOM 119 N CYS B 16 107.467-136.143 0.138 1.00 81.89 ATOM 120 CA CYS B 16 108.038-135.755 1.414 1.00 81.89 ATOM 121 C CYS B 16 108.927-134.524 1.303 1.00 81.99 ATOM 122 O CYS B 16 109.103-133.961 0.223 1.00 82.07 ATOM 123 CB CYS B 16 108.841-136.923 1.984 1.00 81.79 ATOM 124 SG CYS B 16 107.891-138.435 2.204 1.00 81.66 ATOM 125 N GLY B 17 109.481-134.112 2.438 1.00 98.36 ATOM 126 CA GLY B 17 110.434-133.021 2.472 1.00101.47 ATOM 127 C GLY B 17 111.852-133.548 2.403 1.00103.56 ATOM 128 O GLY B 17 112.728-133.096 3.140 1.00104.21 ATOM 129 N CYS B 18 112.075-134.515 1.518 1.00199.26 ATOM 130 CA CYS B 18 113.397-135.103 1.328 1.00202.74 ATOM 131 C CYS B 18 113.615-135.491 -0.127 1.00203.02 ATOM 132 O CYS B 18 114.746-135.503 -0.612 1.00203.07 ATOM 133 CB CYS B 18 113.571-136.341 2.213 1.00203.96 ATOM 134 SG CYS B 18 112.548-137.766 1.737 1.00208.49 ATOM 135 N GLY B 19 112.525-135.814 -0.816 1.00114.63 ATOM 136 CA GLY B 19 112.596-136.250 -2.199 1.00115.67 ATOM 137 C GLY B 19 112.027-137.640 -2.431 1.00115.55 ATOM 138 O GLY B 19 112.514-138.387 -3.282 1.00116.09 ATOM 139 N ASN B 20 110.990-137.984 -1.673 1.00 94.73 ATOM 140 CA ASN B 20 110.332-139.281 -1.799 1.00 93.44 ATOM 141 C ASN B 20 109.145-139.238 -2.761 1.00 93.09 ATOM 142 O ASN B 20 108.281-138.365 -2.669 1.00 93.47 ATOM 143 CB ASN B 20 109.878-139.787 -0.426 1.00 91.43 ATOM 144 CG ASN B 20 110.690-140.975 0.061 1.00 89.39 ATOM 145 OD1 ASN B 20 111.675-141.370 -0.563 1.00 89.04 ATOM 146 ND2 ASN B 20 110.279-141.548 1.186 1.00 87.86 ATOM 147 N VAL B 21 109.114-140.179 -3.696 1.00 90.53 ATOM 148 CA VAL B 21 107.982-140.306 -4.600 1.00 89.73 ATOM 149 C VAL B 21 107.371-141.693 -4.419 1.00 89.43 ATOM 150 O VAL B 21 107.418-142.528 -5.322 1.00 88.82 ATOM 151 CB VAL B 21 108.402-140.086 -6.068 1.00 89.63 ATOM 152 CG1 VAL B 21 107.181-139.831 -6.938 1.00 89.23 ATOM 153 CG2 VAL B 21 109.380-138.915 -6.173 1.00 89.83 ATOM 154 N ILE B 22 106.815-141.940 -3.234 1.00122.39 ATOM 155 CA ILE B 22 106.239-143.244 -2.913 1.00121.21 ATOM 156 C ILE B 22 104.829-143.355 -3.484 1.00119.86 ATOM 157 O ILE B 22 104.010-142.450 -3.321 1.00118.96 ATOM 158 CB ILE B 22 106.204-143.508 -1.381 1.00122.18 ATOM 159 CG1 ILE B 22 107.558-143.197 -0.737 1.00121.89 ATOM 160 CG2 ILE B 22 105.801-144.945 -1.085 1.00122.72 ATOM 161 CD1 ILE B 22 107.581-143.407 0.771 1.00121.18 ATOM 162 N GLU B 23 104.559-144.461 -4.170 1.00123.67 ATOM 163 CA GLU B 23 103.235-144.725 -4.724 1.00122.11 ATOM 164 C GLU B 23 102.358-145.411 -3.684 1.00121.73 ATOM 165 O GLU B 23 102.734-146.454 -3.145 1.00121.84 ATOM 166 CB GLU B 23 103.349-145.607 -5.969 1.00122.09 ATOM 167 CG GLU B 23 102.099-146.424 -6.263 1.00121.39 ATOM 168 CD GLU B 23 102.393-147.906 -6.399 1.00121.51 ATOM 169 OE1 GLU B 23 103.390-148.257 -7.065 1.00121.72 ATOM 170 OE2 GLU B 23 101.635-148.721 -5.833 1.00121.18 ATOM 171 N THR B 24 101.198-144.826 -3.392 1.00105.94 ATOM 172 CA THR B 24 100.300-145.423 -2.407 1.00106.39 ATOM 173 C THR B 24 98.872-145.551 -2.927 1.00105.57 ATOM 174 O THR B 24 98.559-145.067 -4.013 1.00105.54 ATOM 175 CB THR B 24 100.317-144.658 -1.059 1.00106.73 ATOM 176 OG1 THR B 24 100.012-143.275 -1.276 1.00107.47 ATOM 177 CG2 THR B 24 101.679-144.771 -0.393 1.00106.53 ATOM 178 N TYR B 25 98.019-146.213 -2.146 1.00 49.16 ATOM 179 CA TYR B 25 96.609-146.398 -2.497 1.00 49.08 ATOM 180 C TYR B 25 95.680-146.109 -1.318 1.00 49.11 ATOM 181 O TYR B 25 94.927-146.978 -0.891 1.00 49.10 ATOM 182 CB TYR B 25 96.367-147.824 -2.998 1.00 49.02 ATOM 183 CG TYR B 25 96.816-148.057 -4.418 1.00 48.95 ATOM 184 CD1 TYR B 25 98.150-148.292 -4.712 1.00 48.98 ATOM 185 CD2 TYR B 25 95.905-148.042 -5.464 1.00 48.84 ATOM 186 CE1 TYR B 25 98.566-148.502 -6.006 1.00 48.92 ATOM 187 CE2 TYR B 25 96.311-148.254 -6.764 1.00 48.78 ATOM 188 CZ TYR B 25 97.646-148.483 -7.028 1.00 48.82 ATOM 189 OH TYR B 25 98.070-148.696 -8.317 1.00 48.76 ATOM 190 N SER B 26 95.719-144.881 -0.812 1.00 78.90 ATOM 191 CA SER B 26 95.016-144.542 0.423 1.00 78.24 ATOM 192 C SER B 26 93.722-143.773 0.197 1.00 77.48 ATOM 193 O SER B 26 93.446-143.327 -0.908 1.00 77.43 ATOM 194 CB SER B 26 95.928-143.730 1.333 1.00 78.11 ATOM 195 OG SER B 26 96.325-142.535 0.694 1.00 77.75 ATOM 196 N THR B 27 92.946-143.598 1.262 1.00 58.53 ATOM 197 CA THR B 27 91.650-142.927 1.171 1.00 57.48 ATOM 198 C THR B 27 91.737-141.504 0.623 1.00 57.52 ATOM 199 O THR B 27 90.789-141.011 0.014 1.00 56.67 ATOM 200 CB THR B 27 90.938-142.884 2.533 1.00 57.11 ATOM 201 OG1 THR B 27 89.651-142.273 2.381 1.00 56.50 ATOM 202 CG2 THR B 27 91.760-142.088 3.538 1.00 56.62 ATOM 203 N LYS B 28 92.873-140.849 0.835 1.00103.18 ATOM 204 CA LYS B 28 93.056-139.485 0.360 1.00103.93 ATOM 205 C LYS B 28 93.801-139.490 -0.973 1.00105.91 ATOM 206 O LYS B 28 94.789-140.202 -1.122 1.00105.58 ATOM 207 CB LYS B 28 93.797-138.655 1.405 1.00103.14 ATOM 208 CG LYS B 28 93.079-137.380 1.776 1.00102.32 ATOM 209 CD LYS B 28 91.674-137.696 2.260 1.00102.00 ATOM 210 CE LYS B 28 90.644-136.768 1.634 1.00101.72 ATOM 211 NZ LYS B 28 89.255-137.173 1.990 1.00101.65 ATOM 212 N PRO B 29 93.316-138.701 -1.951 1.00 93.93 ATOM 213 CA PRO B 29 93.828-138.715 -3.328 1.00 94.57 ATOM 214 C PRO B 29 95.259-138.224 -3.391 1.00 95.92 ATOM 215 O PRO B 29 96.109-138.794 -4.080 1.00 94.60 ATOM 216 CB PRO B 29 92.917-137.714 -4.053 1.00 94.10 ATOM 217 CG PRO B 29 91.707-137.587 -3.183 1.00 93.74 ATOM 218 CD PRO B 29 92.227-137.725 -1.790 1.00 93.89 ATOM 219 N GLU B 30 95.523-137.151 -2.667 1.00112.40 ATOM 220 CA GLU B 30 96.847-136.579 -2.701 1.00114.70 ATOM 221 C GLU B 30 97.373-136.274 -1.307 1.00115.39 ATOM 222 O GLU B 30 96.997-135.282 -0.672 1.00115.59 ATOM 223 CB GLU B 30 96.884-135.349 -3.608 1.00114.97 ATOM 224 CG GLU B 30 97.995-135.430 -4.644 1.00115.10 ATOM 225 CD GLU B 30 98.009-136.762 -5.372 1.00115.27 ATOM 226 OE1 GLU B 30 99.000-137.510 -5.237 1.00114.00 ATOM 227 OE2 GLU B 30 97.025-137.062 -6.078 1.00115.42 ATOM 228 N ILE B 31 98.234-137.161 -0.824 1.00151.61 ATOM 229 CA ILE B 31 99.025-136.845 0.349 1.00152.80 ATOM 230 C ILE B 31 100.524-136.861 0.053 1.00153.05 ATOM 231 O ILE B 31 100.974-137.439 -0.981 1.00153.38 ATOM 232 CB ILE B 31 98.696-137.740 1.557 1.00153.43 ATOM 233 CG1 ILE B 31 97.263-138.253 1.465 1.00152.71 ATOM 234 CG2 ILE B 31 98.884-136.959 2.856 1.00154.77 ATOM 235 CD1 ILE B 31 97.172-139.704 1.131 1.00150.83 ATOM 236 N TYR B 32 101.233-136.260 1.022 1.00111.76 ATOM 237 CA TYR B 32 102.612-135.789 1.006 1.00110.93 ATOM 238 C TYR B 32 102.989-135.446 2.462 1.00110.50 ATOM 239 O TYR B 32 102.213-134.785 3.151 1.00110.58 ATOM 240 CB TYR B 32 102.695-134.510 0.169 1.00111.23 ATOM 241 CG TYR B 32 101.412-133.673 0.140 1.00111.76 ATOM 242 CD1 TYR B 32 100.810-133.205 1.310 1.00111.38 ATOM 243 CD2 TYR B 32 100.823-133.328 -1.067 1.00111.61 ATOM 244 CE1 TYR B 32 99.652-132.448 1.277 1.00111.28 ATOM 245 CE2 TYR B 32 99.666-132.562 -1.111 1.00111.80 ATOM 246 CZ TYR B 32 99.083-132.126 0.062 1.00111.67 ATOM 247 OH TYR B 32 97.931-131.367 0.014 1.00111.72 ATOM 248 N VAL B 33 104.154-135.886 2.950 1.00102.42 ATOM 249 CA VAL B 33 104.569-135.553 4.332 1.00103.53 ATOM 250 C VAL B 33 106.051-135.144 4.510 1.00103.73 ATOM 251 O VAL B 33 106.510-134.179 3.897 1.00103.75 ATOM 252 CB VAL B 33 104.226-136.681 5.361 1.00103.62 ATOM 253 CG1 VAL B 33 104.049-136.101 6.772 1.00104.35 ATOM 254 CG2 VAL B 33 102.969-137.433 4.959 1.00103.74 ATOM 255 N GLU B 34 106.781-135.885 5.351 1.00131.23 ATOM 256 CA GLU B 34 108.143-135.529 5.780 1.00131.11 ATOM 257 C GLU B 34 109.190-136.528 5.295 1.00129.10 ATOM 258 O GLU B 34 110.171-136.160 4.648 1.00129.09 ATOM 259 CB GLU B 34 108.233-135.483 7.309 1.00132.09 ATOM 260 CG GLU B 34 107.253-134.559 8.005 1.00133.06 ATOM 261 CD GLU B 34 106.910-135.051 9.401 1.00133.72 ATOM 262 OE1 GLU B 34 106.558-136.243 9.539 1.00133.26 ATOM 263 OE2 GLU B 34 106.997-134.254 10.359 1.00133.68 ATOM 264 N VAL B 35 109.004-137.791 5.666 1.00104.44 ATOM 265 CA VAL B 35 109.869-138.872 5.207 1.00103.04 ATOM 266 C VAL B 35 108.995-140.057 4.800 1.00102.33 ATOM 267 O VAL B 35 107.925-140.282 5.374 1.00101.67 ATOM 268 CB VAL B 35 110.883-139.321 6.292 1.00102.75 ATOM 269 CG1 VAL B 35 111.841-140.380 5.735 1.00102.40 ATOM 270 CG2 VAL B 35 111.660-138.131 6.834 1.00102.33 ATOM 271 OXT VAL B 35 109.324-140.803 3.875 1.00102.02 TER