HEADER RIBOSOME/ANTIBIOTIC 24-APR-13 4V9K TITLE 70S ribosome translocation intermediate GDPNP-I containing elongation TITLE 2 factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state. COMPND MOL_ID: 57; COMPND 2 MOLECULE: 50S ribosomal protein L31; COMPND 3 CHAIN: B4, D4; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.50 ANGSTORMS DBREF 4V9K B 1 35 UNP Q72JR0 RL31_THET2 1 35 SEQRES 1 B4 35 MET LYS GLU GLY ILE HIS PRO LYS LEU VAL PRO ALA ARG SEQRES 2 B4 35 ILE ILE CYS GLY CYS GLY ASN VAL ILE GLU THR TYR SER SEQRES 3 B4 35 THR LYS PRO GLU ILE TYR VAL GLU VAL ATOM 1 N MET B 1 79.911-152.258 -0.256 1.00165.90 ATOM 2 CA MET B 1 79.313-151.025 0.253 1.00165.78 ATOM 3 C MET B 1 78.014-150.683 -0.484 1.00165.45 ATOM 4 O MET B 1 77.909-149.631 -1.126 1.00165.77 ATOM 5 CB MET B 1 80.316-149.865 0.163 1.00166.57 ATOM 6 CG MET B 1 81.411-149.898 1.231 1.00167.51 ATOM 7 SD MET B 1 82.321-151.459 1.321 1.00168.41 ATOM 8 CE MET B 1 83.154-151.295 2.900 1.00167.71 ATOM 9 N LYS B 2 77.027-151.572 -0.373 1.00124.40 ATOM 10 CA LYS B 2 75.769-151.436 -1.105 1.00122.63 ATOM 11 C LYS B 2 74.809-150.398 -0.491 1.00121.54 ATOM 12 O LYS B 2 75.095-149.196 -0.493 1.00121.37 ATOM 13 CB LYS B 2 75.083-152.800 -1.234 1.00122.68 ATOM 14 CG LYS B 2 76.045-153.992 -1.266 1.00122.70 ATOM 15 CD LYS B 2 76.949-153.988 -2.488 1.00124.07 ATOM 16 CE LYS B 2 76.140-154.037 -3.771 1.00125.52 ATOM 17 NZ LYS B 2 75.196-155.192 -3.769 1.00126.21 ATOM 18 N GLU B 3 73.685-150.878 0.041 1.00104.16 ATOM 19 CA GLU B 3 72.594-150.020 0.521 1.00104.10 ATOM 20 C GLU B 3 72.200-148.954 -0.508 1.00104.10 ATOM 21 O GLU B 3 72.003-149.270 -1.680 1.00104.15 ATOM 22 CB GLU B 3 72.911-149.386 1.884 1.00104.04 ATOM 23 CG GLU B 3 73.105-150.368 3.049 1.00104.02 ATOM 24 CD GLU B 3 71.823-151.028 3.541 1.00103.99 ATOM 25 OE1 GLU B 3 71.828-151.559 4.673 1.00103.96 ATOM 26 OE2 GLU B 3 70.816-151.025 2.807 1.00104.00 ATOM 27 N GLY B 4 72.098-147.698 -0.079 1.00132.07 ATOM 28 CA GLY B 4 71.611-146.645 -0.958 1.00131.53 ATOM 29 C GLY B 4 72.174-145.248 -0.737 1.00131.83 ATOM 30 O GLY B 4 72.814-144.688 -1.632 1.00131.93 ATOM 31 N ILE B 5 71.932-144.680 0.445 1.00111.04 ATOM 32 CA ILE B 5 72.370-143.314 0.758 1.00111.01 ATOM 33 C ILE B 5 73.869-143.211 1.076 1.00111.02 ATOM 34 O ILE B 5 74.325-142.209 1.634 1.00110.99 ATOM 35 CB ILE B 5 71.550-142.689 1.928 1.00110.93 ATOM 36 CG1 ILE B 5 71.948-143.297 3.278 1.00110.90 ATOM 37 CG2 ILE B 5 70.058-142.843 1.682 1.00110.92 ATOM 38 CD1 ILE B 5 71.265-142.646 4.457 1.00110.83 ATOM 39 N HIS B 6 74.625-144.243 0.704 1.00 94.39 ATOM 40 CA HIS B 6 76.052-144.325 1.011 1.00 93.19 ATOM 41 C HIS B 6 76.836-143.124 0.469 1.00 93.82 ATOM 42 O HIS B 6 76.805-142.842 -0.730 1.00 93.61 ATOM 43 CB HIS B 6 76.641-145.652 0.507 1.00 91.18 ATOM 44 CG HIS B 6 76.927-146.639 1.597 1.00 89.49 ATOM 45 ND1 HIS B 6 75.966-147.070 2.485 1.00 88.87 ATOM 46 CD2 HIS B 6 78.072-147.277 1.948 1.00 88.69 ATOM 47 CE1 HIS B 6 76.502-147.928 3.335 1.00 88.63 ATOM 48 NE2 HIS B 6 77.781-148.069 3.029 1.00 88.95 ATOM 49 N PRO B 7 77.544-142.417 1.370 1.00 67.04 ATOM 50 CA PRO B 7 78.273-141.154 1.183 1.00 67.11 ATOM 51 C PRO B 7 79.398-141.192 0.147 1.00 67.20 ATOM 52 O PRO B 7 80.222-140.271 0.139 1.00 67.25 ATOM 53 CB PRO B 7 78.854-140.884 2.572 1.00 67.05 ATOM 54 CG PRO B 7 77.961-141.618 3.499 1.00 66.95 ATOM 55 CD PRO B 7 77.577-142.854 2.775 1.00 66.95 ATOM 56 N LYS B 8 79.441-142.247 -0.671 1.00 99.93 ATOM 57 CA LYS B 8 80.274-142.319 -1.885 1.00100.02 ATOM 58 C LYS B 8 81.770-142.649 -1.709 1.00100.28 ATOM 59 O LYS B 8 82.220-143.047 -0.630 1.00 99.54 ATOM 60 CB LYS B 8 80.106-141.047 -2.730 1.00 99.36 ATOM 61 CG LYS B 8 79.508-141.278 -4.105 1.00 98.21 ATOM 62 CD LYS B 8 80.513-140.921 -5.189 1.00 97.72 ATOM 63 CE LYS B 8 81.133-139.551 -4.937 1.00 97.15 ATOM 64 NZ LYS B 8 82.006-139.112 -6.065 1.00 96.33 ATOM 65 N LEU B 9 82.521-142.493 -2.801 1.00144.52 ATOM 66 CA LEU B 9 83.972-142.697 -2.813 1.00145.07 ATOM 67 C LEU B 9 84.653-141.650 -3.703 1.00145.52 ATOM 68 O LEU B 9 84.561-140.456 -3.416 1.00145.08 ATOM 69 CB LEU B 9 84.319-144.112 -3.291 1.00145.12 ATOM 70 CG LEU B 9 85.448-144.843 -2.552 1.00145.67 ATOM 71 CD1 LEU B 9 86.829-144.381 -3.008 1.00145.18 ATOM 72 CD2 LEU B 9 85.288-144.676 -1.041 1.00145.60 ATOM 73 N VAL B 10 85.320-142.121 -4.767 1.00118.99 ATOM 74 CA VAL B 10 86.011-141.302 -5.789 1.00120.84 ATOM 75 C VAL B 10 87.499-141.034 -5.432 1.00121.87 ATOM 76 O VAL B 10 87.893-141.205 -4.280 1.00121.81 ATOM 77 CB VAL B 10 85.177-140.012 -6.195 1.00119.18 ATOM 78 CG1 VAL B 10 85.935-138.721 -5.908 1.00118.58 ATOM 79 CG2 VAL B 10 84.719-140.086 -7.652 1.00118.14 ATOM 80 N PRO B 11 88.341-140.692 -6.434 1.00157.90 ATOM 81 CA PRO B 11 89.762-140.347 -6.215 1.00160.70 ATOM 82 C PRO B 11 90.063-138.993 -5.529 1.00160.46 ATOM 83 O PRO B 11 89.387-137.999 -5.794 1.00161.52 ATOM 84 CB PRO B 11 90.351-140.362 -7.636 1.00159.03 ATOM 85 CG PRO B 11 89.174-140.216 -8.547 1.00157.90 ATOM 86 CD PRO B 11 88.060-140.931 -7.861 1.00157.87 ATOM 87 N ALA B 12 91.085-138.977 -4.668 1.00151.14 ATOM 88 CA ALA B 12 91.540-137.775 -3.946 1.00151.50 ATOM 89 C ALA B 12 93.063-137.611 -4.082 1.00152.91 ATOM 90 O ALA B 12 93.735-138.550 -4.528 1.00152.82 ATOM 91 CB ALA B 12 91.153-137.874 -2.482 1.00149.30 ATOM 92 N ARG B 13 93.637-136.465 -3.692 1.00153.18 ATOM 93 CA ARG B 13 95.062-136.357 -3.935 1.00153.84 ATOM 94 C ARG B 13 95.723-136.186 -2.589 1.00153.79 ATOM 95 O ARG B 13 95.082-136.431 -1.565 1.00153.70 ATOM 96 CB ARG B 13 95.353-135.206 -4.897 1.00155.45 ATOM 97 CG ARG B 13 94.739-135.413 -6.283 1.00157.55 ATOM 98 CD ARG B 13 95.475-136.503 -7.072 1.00158.28 ATOM 99 NE ARG B 13 96.301-135.941 -8.143 1.00159.75 ATOM 100 CZ ARG B 13 97.208-136.621 -8.840 1.00159.65 ATOM 101 NH1 ARG B 13 97.427-137.904 -8.582 1.00160.51 ATOM 102 NH2 ARG B 13 97.903-136.012 -9.793 1.00160.79 ATOM 103 N ILE B 14 96.993-135.797 -2.566 1.00189.66 ATOM 104 CA ILE B 14 97.550-135.140 -1.379 1.00189.14 ATOM 105 C ILE B 14 98.608-134.110 -1.811 1.00187.28 ATOM 106 O ILE B 14 99.809-134.403 -1.832 1.00186.86 ATOM 107 CB ILE B 14 98.107-136.114 -0.262 1.00189.70 ATOM 108 CG1 ILE B 14 97.509-137.530 -0.341 1.00190.29 ATOM 109 CG2 ILE B 14 97.824-135.534 1.111 1.00189.04 ATOM 110 CD1 ILE B 14 97.700-138.372 0.916 1.00190.91 ATOM 111 N ILE B 15 98.144-132.915 -2.186 1.00114.50 ATOM 112 CA ILE B 15 99.024-131.793 -2.519 1.00114.37 ATOM 113 C ILE B 15 99.648-131.284 -1.216 1.00114.23 ATOM 114 O ILE B 15 99.283-130.225 -0.695 1.00114.09 ATOM 115 CB ILE B 15 98.263-130.652 -3.266 1.00114.31 ATOM 116 CG1 ILE B 15 97.287-131.240 -4.292 1.00114.46 ATOM 117 CG2 ILE B 15 99.239-129.705 -3.940 1.00114.23 ATOM 118 CD1 ILE B 15 96.370-130.229 -4.945 1.00114.41 ATOM 119 N CYS B 16 100.590-132.070 -0.700 1.00114.27 ATOM 120 CA CYS B 16 101.149-131.884 0.633 1.00114.16 ATOM 121 C CYS B 16 101.993-130.623 0.779 1.00114.00 ATOM 122 O CYS B 16 101.627-129.545 0.316 1.00113.91 ATOM 123 CB CYS B 16 101.997-133.107 1.008 1.00114.25 ATOM 124 SG CYS B 16 101.078-134.592 1.522 1.00114.40 ATOM 125 N GLY B 17 103.128-130.780 1.449 1.00141.31 ATOM 126 CA GLY B 17 104.071-129.699 1.648 1.00141.61 ATOM 127 C GLY B 17 105.493-130.211 1.525 1.00142.79 ATOM 128 O GLY B 17 106.334-129.963 2.392 1.00142.99 ATOM 129 N CYS B 18 105.756-130.943 0.446 1.00130.78 ATOM 130 CA CYS B 18 107.100-131.436 0.155 1.00130.81 ATOM 131 C CYS B 18 107.261-131.813 -1.321 1.00130.52 ATOM 132 O CYS B 18 108.169-132.565 -1.681 1.00130.42 ATOM 133 CB CYS B 18 107.470-132.617 1.070 1.00130.55 ATOM 134 SG CYS B 18 106.301-134.009 1.095 1.00131.15 ATOM 135 N GLY B 19 106.383-131.275 -2.166 1.00114.14 ATOM 136 CA GLY B 19 106.394-131.573 -3.590 1.00114.26 ATOM 137 C GLY B 19 105.716-132.890 -3.921 1.00114.43 ATOM 138 O GLY B 19 105.716-133.334 -5.072 1.00114.54 ATOM 139 N ASN B 20 105.127-133.506 -2.899 1.00157.89 ATOM 140 CA ASN B 20 104.511-134.827 -3.010 1.00158.61 ATOM 141 C ASN B 20 103.305-134.861 -3.954 1.00160.30 ATOM 142 O ASN B 20 102.421-133.997 -3.887 1.00159.04 ATOM 143 CB ASN B 20 104.103-135.338 -1.621 1.00160.04 ATOM 144 CG ASN B 20 104.163-136.849 -1.515 1.00161.18 ATOM 145 OD1 ASN B 20 104.142-137.552 -2.525 1.00161.46 ATOM 146 ND2 ASN B 20 104.231-137.357 -0.290 1.00161.21 ATOM 147 N VAL B 21 103.278-135.860 -4.832 1.00115.34 ATOM 148 CA VAL B 21 102.141-136.068 -5.717 1.00115.28 ATOM 149 C VAL B 21 101.530-137.436 -5.423 1.00115.77 ATOM 150 O VAL B 21 101.807-138.417 -6.119 1.00115.76 ATOM 151 CB VAL B 21 102.551-135.984 -7.201 1.00115.96 ATOM 152 CG1 VAL B 21 101.314-135.950 -8.096 1.00115.82 ATOM 153 CG2 VAL B 21 103.419-134.757 -7.445 1.00116.30 ATOM 154 N ILE B 22 100.708-137.491 -4.380 1.00 87.33 ATOM 155 CA ILE B 22 100.132-138.746 -3.911 1.00 87.38 ATOM 156 C ILE B 22 98.813-139.076 -4.616 1.00 87.39 ATOM 157 O ILE B 22 97.958-138.206 -4.812 1.00 87.33 ATOM 158 CB ILE B 22 99.920-138.723 -2.373 1.00 87.38 ATOM 159 CG1 ILE B 22 101.155-138.163 -1.665 1.00 87.36 ATOM 160 CG2 ILE B 22 99.562-140.109 -1.843 1.00 87.44 ATOM 161 CD1 ILE B 22 101.080-138.206 -0.159 1.00 87.36 ATOM 162 N GLU B 23 98.674-140.340 -5.009 1.00161.83 ATOM 163 CA GLU B 23 97.449-140.853 -5.608 1.00162.51 ATOM 164 C GLU B 23 96.590-141.514 -4.538 1.00161.85 ATOM 165 O GLU B 23 96.978-142.540 -3.970 1.00161.51 ATOM 166 CB GLU B 23 97.782-141.882 -6.694 1.00162.42 ATOM 167 CG GLU B 23 96.598-142.756 -7.120 1.00162.50 ATOM 168 CD GLU B 23 97.017-143.965 -7.947 1.00162.25 ATOM 169 OE1 GLU B 23 97.478-143.776 -9.093 1.00162.00 ATOM 170 OE2 GLU B 23 96.893-145.105 -7.446 1.00161.78 ATOM 171 N THR B 24 95.429-140.930 -4.256 1.00173.75 ATOM 172 CA THR B 24 94.514-141.532 -3.295 1.00171.54 ATOM 173 C THR B 24 93.103-141.662 -3.881 1.00170.03 ATOM 174 O THR B 24 92.859-141.220 -5.005 1.00169.91 ATOM 175 CB THR B 24 94.525-140.769 -1.955 1.00171.02 ATOM 176 OG1 THR B 24 94.687-139.367 -2.200 1.00169.74 ATOM 177 CG2 THR B 24 95.679-141.245 -1.081 1.00169.74 ATOM 178 N TYR B 25 92.193-142.285 -3.131 1.00127.65 ATOM 179 CA TYR B 25 90.821-142.514 -3.591 1.00124.67 ATOM 180 C TYR B 25 89.861-142.564 -2.409 1.00124.40 ATOM 181 O TYR B 25 89.761-143.586 -1.750 1.00123.96 ATOM 182 CB TYR B 25 90.720-143.840 -4.359 1.00124.94 ATOM 183 CG TYR B 25 90.907-143.738 -5.857 1.00124.89 ATOM 184 CD1 TYR B 25 92.173-143.630 -6.413 1.00125.02 ATOM 185 CD2 TYR B 25 89.816-143.780 -6.717 1.00124.44 ATOM 186 CE1 TYR B 25 92.352-143.534 -7.777 1.00126.40 ATOM 187 CE2 TYR B 25 89.985-143.699 -8.088 1.00125.97 ATOM 188 CZ TYR B 25 91.256-143.571 -8.612 1.00126.96 ATOM 189 OH TYR B 25 91.437-143.483 -9.976 1.00128.23 ATOM 190 N SER B 26 89.147-141.476 -2.136 1.00 87.38 ATOM 191 CA SER B 26 88.238-141.460 -0.989 1.00 87.37 ATOM 192 C SER B 26 86.995-140.616 -1.206 1.00 87.31 ATOM 193 O SER B 26 86.842-139.971 -2.235 1.00 87.28 ATOM 194 CB SER B 26 88.950-140.961 0.271 1.00 87.35 ATOM 195 OG SER B 26 89.043-139.543 0.285 1.00 87.28 ATOM 196 N THR B 27 86.131-140.616 -0.197 1.00 92.91 ATOM 197 CA THR B 27 84.851-139.911 -0.225 1.00 92.86 ATOM 198 C THR B 27 84.901-138.513 -0.854 1.00 92.79 ATOM 199 O THR B 27 84.013-138.138 -1.621 1.00 92.77 ATOM 200 CB THR B 27 84.232-139.838 1.195 1.00 92.85 ATOM 201 OG1 THR B 27 83.276-138.772 1.251 1.00 92.78 ATOM 202 CG2 THR B 27 85.314-139.606 2.241 1.00 92.84 ATOM 203 N LYS B 28 85.949-137.757 -0.544 1.00 99.76 ATOM 204 CA LYS B 28 86.108-136.409 -1.088 1.00100.69 ATOM 205 C LYS B 28 87.170-136.396 -2.196 1.00101.87 ATOM 206 O LYS B 28 88.156-137.135 -2.113 1.00101.63 ATOM 207 CB LYS B 28 86.467-135.433 0.035 1.00 97.96 ATOM 208 CG LYS B 28 85.662-134.142 0.041 1.00 96.15 ATOM 209 CD LYS B 28 84.182-134.420 -0.155 1.00 95.51 ATOM 210 CE LYS B 28 83.445-133.165 -0.586 1.00 95.04 ATOM 211 NZ LYS B 28 82.036-133.438 -0.980 1.00 94.16 ATOM 212 N PRO B 29 86.971-135.560 -3.238 1.00126.84 ATOM 213 CA PRO B 29 87.836-135.617 -4.423 1.00128.32 ATOM 214 C PRO B 29 89.123-134.792 -4.322 1.00130.13 ATOM 215 O PRO B 29 90.128-135.160 -4.939 1.00129.99 ATOM 216 CB PRO B 29 86.941-135.059 -5.544 1.00127.46 ATOM 217 CG PRO B 29 85.684-134.534 -4.865 1.00127.08 ATOM 218 CD PRO B 29 85.920-134.541 -3.394 1.00126.69 ATOM 219 N GLU B 30 89.107-133.694 -3.573 1.00158.27 ATOM 220 CA GLU B 30 90.304-132.866 -3.476 1.00158.99 ATOM 221 C GLU B 30 90.896-132.803 -2.073 1.00158.94 ATOM 222 O GLU B 30 90.610-131.887 -1.293 1.00159.13 ATOM 223 CB GLU B 30 90.059-131.470 -4.052 1.00160.26 ATOM 224 CG GLU B 30 90.533-131.337 -5.496 1.00161.77 ATOM 225 CD GLU B 30 90.094-132.507 -6.367 1.00162.52 ATOM 226 OE1 GLU B 30 90.965-133.312 -6.773 1.00162.36 ATOM 227 OE2 GLU B 30 88.878-132.627 -6.639 1.00163.18 ATOM 228 N ILE B 31 91.729-133.795 -1.771 1.00 94.09 ATOM 229 CA ILE B 31 92.498-133.800 -0.537 1.00 93.42 ATOM 230 C ILE B 31 93.943-133.438 -0.840 1.00 93.18 ATOM 231 O ILE B 31 94.503-133.921 -1.852 1.00 92.48 ATOM 232 CB ILE B 31 92.440-135.165 0.191 1.00 92.86 ATOM 233 CG1 ILE B 31 91.107-135.324 0.929 1.00 92.74 ATOM 234 CG2 ILE B 31 93.598-135.306 1.177 1.00 93.94 ATOM 235 CD1 ILE B 31 89.927-135.610 0.034 1.00 91.14 ATOM 236 N TYR B 32 94.463-132.553 0.031 1.00106.82 ATOM 237 CA TYR B 32 95.846-132.057 0.159 1.00106.96 ATOM 238 C TYR B 32 96.155-131.787 1.652 1.00107.32 ATOM 239 O TYR B 32 95.345-131.153 2.336 1.00106.86 ATOM 240 CB TYR B 32 96.037-130.737 -0.609 1.00105.52 ATOM 241 CG TYR B 32 94.782-129.907 -0.836 1.00103.50 ATOM 242 CD1 TYR B 32 93.912-129.596 0.210 1.00103.00 ATOM 243 CD2 TYR B 32 94.486-129.409 -2.098 1.00102.19 ATOM 244 CE1 TYR B 32 92.768-128.841 -0.009 1.00102.28 ATOM 245 CE2 TYR B 32 93.353-128.651 -2.323 1.00101.50 ATOM 246 CZ TYR B 32 92.497-128.371 -1.278 1.00102.08 ATOM 247 OH TYR B 32 91.367-127.617 -1.505 1.00102.46 ATOM 248 N VAL B 33 97.303-132.251 2.164 1.00114.77 ATOM 249 CA VAL B 33 97.653-132.028 3.585 1.00116.24 ATOM 250 C VAL B 33 99.093-131.523 3.871 1.00116.73 ATOM 251 O VAL B 33 99.462-130.421 3.448 1.00117.02 ATOM 252 CB VAL B 33 97.339-133.271 4.473 1.00116.47 ATOM 253 CG1 VAL B 33 97.198-132.864 5.942 1.00116.23 ATOM 254 CG2 VAL B 33 96.060-133.939 4.027 1.00116.94 ATOM 255 N GLU B 34 99.891-132.326 4.583 1.00147.97 ATOM 256 CA GLU B 34 101.182-131.881 5.124 1.00147.28 ATOM 257 C GLU B 34 102.367-132.662 4.564 1.00147.33 ATOM 258 O GLU B 34 103.071-132.192 3.668 1.00147.14 ATOM 259 CB GLU B 34 101.191-132.021 6.646 1.00146.83 ATOM 260 CG GLU B 34 100.056-131.323 7.353 1.00146.17 ATOM 261 CD GLU B 34 99.826-131.870 8.750 1.00145.90 ATOM 262 OE1 GLU B 34 99.509-133.076 8.876 1.00145.25 ATOM 263 OE2 GLU B 34 99.972-131.094 9.720 1.00145.73 ATOM 264 N VAL B 35 102.603-133.843 5.127 1.00100.85 ATOM 265 CA VAL B 35 103.601-134.756 4.589 1.00100.65 ATOM 266 C VAL B 35 102.891-136.021 4.118 1.00101.47 ATOM 267 O VAL B 35 101.834-136.382 4.648 1.00101.94 ATOM 268 CB VAL B 35 104.685-135.112 5.630 1.00101.06 ATOM 269 CG1 VAL B 35 105.933-135.655 4.938 1.00101.14 ATOM 270 CG2 VAL B 35 105.035-133.891 6.459 1.00100.82 ATOM 271 OXT VAL B 35 103.338-136.696 3.186 1.00101.36 TER