HEADER PROTEIN BINDING/METAL BINDING PROTEIN 12-JAN-15 4XKL TITLE Crystal structure of NDP52 ZF2 in complex with mono-ubiquitin COMPND MOL_ID: 2; COMPND 2 MOLECULE: Calcium-binding and coiled-coil domain-containing protein COMPND 3 CHAIN: B, D; COMPND 4 FRAGMENT: Zinc finger, UNP residues ; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.10 ANGSTORMS DBREF 4XKL B 414 446 UNP Q13137 CACO2_HUMAN 414 446 SEQRES 1 B 30 PRO LEU CYS PHE ASN CYS PRO ILE CYS ASP LYS ILE PHE SEQRES 2 B 30 PRO ALA THR GLU LYS GLN ILE PHE GLU ASP HIS VAL PHE SEQRES 3 B 30 CYS HIS SER LEU ATOM 1 N PRO B 417 106.154 1.352 52.114 1.00 63.94 ATOM 2 CA PRO B 417 105.524 2.674 52.135 1.00 54.74 ATOM 3 C PRO B 417 104.007 2.555 52.237 1.00 37.70 ATOM 4 O PRO B 417 103.427 1.606 51.712 1.00 36.37 ATOM 5 CB PRO B 417 105.941 3.301 50.794 1.00 61.36 ATOM 6 CG PRO B 417 106.946 2.369 50.174 1.00 72.70 ATOM 7 CD PRO B 417 107.278 1.288 51.166 1.00 70.25 ATOM 8 N LEU B 418 103.376 3.476 52.958 1.00 33.94 ATOM 9 CA LEU B 418 101.912 3.514 53.006 1.00 33.23 ATOM 10 C LEU B 418 101.335 3.615 51.591 1.00 32.63 ATOM 11 O LEU B 418 100.407 2.887 51.254 1.00 35.66 ATOM 12 CB LEU B 418 101.409 4.689 53.848 1.00 32.26 ATOM 13 CG LEU B 418 101.358 4.465 55.358 1.00 29.94 ATOM 14 CD1 LEU B 418 100.978 5.755 56.074 1.00 29.23 ATOM 15 CD2 LEU B 418 100.422 3.313 55.690 1.00 30.47 ATOM 16 N CYS B 419 101.854 4.544 50.788 1.00 32.44 ATOM 17 CA CYS B 419 101.307 4.825 49.457 1.00 31.35 ATOM 18 C CYS B 419 102.321 4.692 48.335 1.00 34.19 ATOM 19 O CYS B 419 103.523 4.820 48.556 1.00 41.40 ATOM 20 CB CYS B 419 100.704 6.227 49.409 1.00 34.37 ATOM 21 SG CYS B 419 99.139 6.300 50.310 1.00 34.87 ATOM 22 N PHE B 420 101.814 4.375 47.148 1.00 33.02 ATOM 23 CA PHE B 420 102.582 4.419 45.913 1.00 30.74 ATOM 24 C PHE B 420 102.164 5.651 45.148 1.00 30.92 ATOM 25 O PHE B 420 101.034 6.151 45.261 1.00 24.34 ATOM 26 CB PHE B 420 102.319 3.196 45.017 1.00 35.26 ATOM 27 CG PHE B 420 102.754 1.882 45.611 1.00 38.08 ATOM 28 CD1 PHE B 420 103.974 1.758 46.275 1.00 45.67 ATOM 29 CD2 PHE B 420 101.952 0.763 45.489 1.00 41.58 ATOM 30 CE1 PHE B 420 104.354 0.560 46.858 1.00 39.18 ATOM 31 CE2 PHE B 420 102.324 -0.441 46.068 1.00 48.91 ATOM 32 CZ PHE B 420 103.539 -0.547 46.732 1.00 45.21 ATOM 33 N ASN B 421 103.102 6.117 44.342 1.00 28.64 ATOM 34 CA ASN B 421 102.883 7.216 43.418 1.00 31.94 ATOM 35 C ASN B 421 103.058 6.719 41.978 1.00 26.70 ATOM 36 O ASN B 421 104.032 6.020 41.673 1.00 22.03 ATOM 37 CB ASN B 421 103.926 8.292 43.707 1.00 40.68 ATOM 38 CG ASN B 421 103.561 9.614 43.096 1.00 44.77 ATOM 39 OD1 ASN B 421 102.396 9.859 42.784 1.00 49.77 ATOM 40 ND2 ASN B 421 104.553 10.467 42.901 1.00 52.05 ATOM 41 N CYS B 422 102.090 6.981 41.111 1.00 19.95 ATOM 42 CA CYS B 422 102.300 6.651 39.704 1.00 22.15 ATOM 43 C CYS B 422 103.490 7.421 39.152 1.00 20.21 ATOM 44 O CYS B 422 103.507 8.645 39.180 1.00 21.93 ATOM 45 CB CYS B 422 101.065 6.984 38.856 1.00 17.27 ATOM 46 SG CYS B 422 101.355 6.785 37.076 1.00 18.96 ATOM 47 N PRO B 423 104.448 6.713 38.542 1.00 30.79 ATOM 48 CA PRO B 423 105.605 7.434 38.028 1.00 35.65 ATOM 49 C PRO B 423 105.321 8.236 36.762 1.00 36.59 ATOM 50 O PRO B 423 106.237 8.849 36.225 1.00 45.72 ATOM 51 CB PRO B 423 106.592 6.315 37.730 1.00 36.63 ATOM 52 CG PRO B 423 105.729 5.162 37.332 1.00 40.30 ATOM 53 CD PRO B 423 104.458 5.297 38.137 1.00 37.17 ATOM 54 N ILE B 424 104.074 8.281 36.299 1.00 32.59 ATOM 55 CA ILE B 424 103.790 8.918 35.015 1.00 29.34 ATOM 56 C ILE B 424 102.895 10.127 35.198 1.00 23.49 ATOM 57 O ILE B 424 103.146 11.193 34.634 1.00 19.37 ATOM 58 CB ILE B 424 103.158 7.932 34.020 1.00 29.73 ATOM 59 CG1 ILE B 424 104.135 6.793 33.729 1.00 31.21 ATOM 60 CG2 ILE B 424 102.778 8.635 32.723 1.00 33.37 ATOM 61 CD1 ILE B 424 103.496 5.660 32.966 1.00 34.01 ATOM 62 N CYS B 425 101.908 9.982 36.075 1.00 25.36 ATOM 63 CA CYS B 425 100.904 11.022 36.273 1.00 19.82 ATOM 64 C CYS B 425 100.862 11.603 37.714 1.00 19.91 ATOM 65 O CYS B 425 100.142 12.555 38.003 1.00 15.70 ATOM 66 CB CYS B 425 99.545 10.499 35.823 1.00 16.26 ATOM 67 SG CYS B 425 98.790 9.363 37.000 1.00 16.50 ATOM 68 N ASP B 426 101.624 11.003 38.617 1.00 24.07 ATOM 69 CA ASP B 426 101.681 11.428 40.017 1.00 33.68 ATOM 70 C ASP B 426 100.403 11.197 40.834 1.00 29.66 ATOM 71 O ASP B 426 100.204 11.764 41.907 1.00 31.15 ATOM 72 CB ASP B 426 102.148 12.879 40.092 1.00 34.00 ATOM 73 CG ASP B 426 103.592 13.037 39.654 1.00 44.69 ATOM 74 OD1 ASP B 426 104.384 12.063 39.774 1.00 37.39 ATOM 75 OD2 ASP B 426 103.922 14.143 39.174 1.00 45.20 ATOM 76 N LYS B 427 99.559 10.294 40.368 1.00 34.00 ATOM 77 CA LYS B 427 98.422 9.865 41.162 1.00 27.50 ATOM 78 C LYS B 427 98.946 9.004 42.311 1.00 24.52 ATOM 79 O LYS B 427 99.884 8.241 42.133 1.00 21.96 ATOM 80 CB LYS B 427 97.448 9.063 40.310 1.00 28.30 ATOM 81 CG LYS B 427 96.136 8.797 41.030 1.00 37.37 ATOM 82 CD LYS B 427 95.142 8.040 40.162 1.00 44.07 ATOM 83 CE LYS B 427 93.736 8.045 40.754 1.00 41.80 ATOM 84 NZ LYS B 427 93.580 7.111 41.911 1.00 45.17 ATOM 85 N ILE B 428 98.309 9.127 43.475 1.00 25.62 ATOM 86 CA ILE B 428 98.666 8.371 44.669 1.00 25.77 ATOM 87 C ILE B 428 97.682 7.219 44.970 1.00 22.08 ATOM 88 O ILE B 428 96.447 7.332 44.863 1.00 21.37 ATOM 89 CB ILE B 428 98.842 9.303 45.899 1.00 26.88 ATOM 90 CG1 ILE B 428 99.873 10.404 45.616 1.00 26.93 ATOM 91 CG2 ILE B 428 99.263 8.509 47.133 1.00 31.52 ATOM 92 CD1 ILE B 428 100.003 11.438 46.722 1.00 28.04 ATOM 93 N PHE B 429 98.271 6.054 45.213 1.00 20.82 ATOM 94 CA PHE B 429 97.504 4.840 45.470 1.00 23.13 ATOM 95 C PHE B 429 97.947 4.251 46.795 1.00 20.64 ATOM 96 O PHE B 429 99.121 4.332 47.133 1.00 23.05 ATOM 97 CB PHE B 429 97.738 3.811 44.375 1.00 24.75 ATOM 98 CG PHE B 429 97.097 4.167 43.060 1.00 27.95 ATOM 99 CD1 PHE B 429 97.723 5.033 42.180 1.00 25.93 ATOM 100 CD2 PHE B 429 95.876 3.596 42.676 1.00 29.46 ATOM 101 CE1 PHE B 429 97.133 5.339 40.951 1.00 28.23 ATOM 102 CE2 PHE B 429 95.294 3.906 41.453 1.00 26.11 ATOM 103 CZ PHE B 429 95.910 4.788 40.596 1.00 21.93 ATOM 104 N PRO B 430 97.002 3.720 47.575 1.00 23.61 ATOM 105 CA PRO B 430 97.412 3.033 48.791 1.00 21.09 ATOM 106 C PRO B 430 98.156 1.797 48.393 1.00 22.06 ATOM 107 O PRO B 430 97.688 1.081 47.516 1.00 25.80 ATOM 108 CB PRO B 430 96.093 2.665 49.457 1.00 22.94 ATOM 109 CG PRO B 430 95.132 2.519 48.312 1.00 27.22 ATOM 110 CD PRO B 430 95.580 3.480 47.244 1.00 25.18 ATOM 111 N ALA B 431 99.250 1.508 49.089 1.00 28.91 ATOM 112 CA ALA B 431 100.034 0.322 48.800 1.00 29.40 ATOM 113 C ALA B 431 99.247 -0.975 48.958 1.00 32.66 ATOM 114 O ALA B 431 99.601 -1.972 48.324 1.00 34.52 ATOM 115 CB ALA B 431 101.299 0.287 49.640 1.00 31.09 ATOM 116 N THR B 432 98.161 -0.970 49.732 1.00 27.21 ATOM 117 CA THR B 432 97.396 -2.210 49.946 1.00 31.65 ATOM 118 C THR B 432 96.651 -2.723 48.727 1.00 27.40 ATOM 119 O THR B 432 96.184 -3.851 48.745 1.00 36.43 ATOM 120 CB THR B 432 96.325 -2.113 51.036 1.00 30.19 ATOM 121 OG1 THR B 432 95.309 -1.194 50.617 1.00 31.08 ATOM 122 CG2 THR B 432 96.942 -1.692 52.349 1.00 33.29 ATOM 123 N GLU B 433 96.414 -1.871 47.740 1.00 30.47 ATOM 124 CA GLU B 433 95.667 -2.301 46.567 1.00 35.56 ATOM 125 C GLU B 433 96.601 -2.317 45.363 1.00 28.43 ATOM 126 O GLU B 433 96.647 -1.379 44.540 1.00 29.53 ATOM 127 CB GLU B 433 94.420 -1.432 46.358 1.00 47.32 ATOM 128 CG GLU B 433 93.967 -0.692 47.609 1.00 50.92 ATOM 129 CD GLU B 433 92.460 -0.659 47.762 1.00 50.24 ATOM 130 OE1 GLU B 433 91.823 0.262 47.203 1.00 45.47 ATOM 131 OE2 GLU B 433 91.922 -1.554 48.448 1.00 48.32 ATOM 132 N LYS B 434 97.343 -3.417 45.263 1.00 26.62 ATOM 133 CA LYS B 434 98.534 -3.446 44.407 1.00 27.82 ATOM 134 C LYS B 434 98.190 -3.786 42.976 1.00 19.79 ATOM 135 O LYS B 434 98.751 -3.198 42.074 1.00 21.23 ATOM 136 CB LYS B 434 99.607 -4.400 44.921 1.00 40.87 ATOM 137 CG LYS B 434 101.019 -3.817 44.848 1.00 47.05 ATOM 138 CD LYS B 434 102.070 -4.684 45.528 1.00 47.40 ATOM 139 CE LYS B 434 102.819 -5.524 44.498 1.00 58.51 ATOM 140 NZ LYS B 434 101.971 -6.615 43.937 1.00 62.91 ATOM 141 N GLN B 435 97.248 -4.696 42.771 1.00 23.55 ATOM 142 CA GLN B 435 96.774 -4.998 41.412 1.00 23.99 ATOM 143 C GLN B 435 96.164 -3.751 40.791 1.00 19.06 ATOM 144 O GLN B 435 96.385 -3.460 39.622 1.00 19.52 ATOM 145 CB GLN B 435 95.806 -6.199 41.411 1.00 26.10 ATOM 146 CG GLN B 435 94.857 -6.337 40.208 1.00 22.74 ATOM 147 CD GLN B 435 93.474 -5.773 40.506 1.00 27.84 ATOM 148 OE1 GLN B 435 92.980 -5.882 41.637 1.00 26.62 ATOM 149 NE2 GLN B 435 92.864 -5.102 39.516 1.00 30.90 ATOM 150 N ILE B 436 95.415 -2.982 41.566 1.00 20.32 ATOM 151 CA ILE B 436 94.757 -1.811 40.983 1.00 18.80 ATOM 152 C ILE B 436 95.757 -0.755 40.554 1.00 19.16 ATOM 153 O ILE B 436 95.656 -0.181 39.449 1.00 14.50 ATOM 154 CB ILE B 436 93.733 -1.181 41.933 1.00 22.73 ATOM 155 CG1 ILE B 436 92.515 -2.098 42.033 1.00 22.89 ATOM 156 CG2 ILE B 436 93.368 0.230 41.491 1.00 22.98 ATOM 157 CD1 ILE B 436 91.738 -1.907 43.323 1.00 28.60 ATOM 158 N PHE B 437 96.757 -0.518 41.398 1.00 18.29 ATOM 159 CA PHE B 437 97.855 0.378 41.019 1.00 16.66 ATOM 160 C PHE B 437 98.580 -0.104 39.759 1.00 15.50 ATOM 161 O PHE B 437 98.829 0.686 38.840 1.00 19.75 ATOM 162 CB PHE B 437 98.879 0.464 42.140 1.00 17.87 ATOM 163 CG PHE B 437 100.095 1.263 41.799 1.00 16.86 ATOM 164 CD1 PHE B 437 99.988 2.602 41.445 1.00 19.44 ATOM 165 CD2 PHE B 437 101.357 0.721 41.955 1.00 18.53 ATOM 166 CE1 PHE B 437 101.107 3.355 41.163 1.00 16.46 ATOM 167 CE2 PHE B 437 102.488 1.487 41.698 1.00 23.47 ATOM 168 CZ PHE B 437 102.357 2.790 41.264 1.00 19.16 ATOM 169 N GLU B 438 99.014 -1.359 39.764 1.00 15.19 ATOM 170 CA GLU B 438 99.762 -1.916 38.620 1.00 15.71 ATOM 171 C GLU B 438 98.956 -1.824 37.338 1.00 13.97 ATOM 172 O GLU B 438 99.504 -1.579 36.272 1.00 17.15 ATOM 173 CB GLU B 438 100.109 -3.382 38.852 1.00 19.02 ATOM 174 CG GLU B 438 101.397 -3.626 39.612 1.00 23.33 ATOM 175 CD GLU B 438 101.708 -5.108 39.755 1.00 24.94 ATOM 176 OE1 GLU B 438 101.864 -5.793 38.722 1.00 34.45 ATOM 177 OE2 GLU B 438 101.797 -5.588 40.903 1.00 30.09 ATOM 178 N ASP B 439 97.651 -2.081 37.424 1.00 14.79 ATOM 179 CA ASP B 439 96.779 -1.926 36.249 1.00 14.62 ATOM 180 C ASP B 439 96.715 -0.496 35.760 1.00 12.31 ATOM 181 O ASP B 439 96.812 -0.259 34.578 1.00 13.18 ATOM 182 CB ASP B 439 95.382 -2.433 36.538 1.00 16.66 ATOM 183 CG ASP B 439 95.312 -3.963 36.528 1.00 20.84 ATOM 184 OD1 ASP B 439 96.223 -4.586 35.945 1.00 16.88 ATOM 185 OD2 ASP B 439 94.290 -4.530 36.974 1.00 21.32 ATOM 186 N HIS B 440 96.614 0.449 36.681 1.00 13.42 ATOM 187 CA HIS B 440 96.655 1.870 36.375 1.00 12.27 ATOM 188 C HIS B 440 97.919 2.221 35.585 1.00 14.85 ATOM 189 O HIS B 440 97.839 2.850 34.525 1.00 12.43 ATOM 190 CB HIS B 440 96.553 2.706 37.662 1.00 13.77 ATOM 191 CG HIS B 440 97.003 4.122 37.489 1.00 16.36 ATOM 192 ND1 HIS B 440 96.132 5.142 37.181 1.00 17.77 ATOM 193 CD2 HIS B 440 98.248 4.644 37.362 1.00 18.18 ATOM 194 CE1 HIS B 440 96.816 6.233 36.884 1.00 15.67 ATOM 195 NE2 HIS B 440 98.103 5.966 37.024 1.00 17.05 ATOM 196 N VAL B 441 99.085 1.781 36.064 1.00 13.92 ATOM 197 CA VAL B 441 100.319 2.082 35.399 1.00 14.03 ATOM 198 C VAL B 441 100.393 1.442 34.024 1.00 15.23 ATOM 199 O VAL B 441 100.853 2.096 33.088 1.00 18.13 ATOM 200 CB VAL B 441 101.555 1.684 36.240 1.00 17.03 ATOM 201 CG1 VAL B 441 102.820 1.877 35.450 1.00 13.44 ATOM 202 CG2 VAL B 441 101.642 2.540 37.487 1.00 17.26 ATOM 203 N PHE B 442 99.962 0.179 33.920 1.00 17.65 ATOM 204 CA PHE B 442 99.757 -0.504 32.638 1.00 16.34 ATOM 205 C PHE B 442 98.894 0.318 31.681 1.00 15.54 ATOM 206 O PHE B 442 99.238 0.440 30.516 1.00 13.02 ATOM 207 CB PHE B 442 99.156 -1.916 32.858 1.00 18.37 ATOM 208 CG PHE B 442 98.757 -2.637 31.584 1.00 16.16 ATOM 209 CD1 PHE B 442 99.721 -3.124 30.710 1.00 20.14 ATOM 210 CD2 PHE B 442 97.421 -2.881 31.285 1.00 19.08 ATOM 211 CE1 PHE B 442 99.376 -3.723 29.512 1.00 17.16 ATOM 212 CE2 PHE B 442 97.065 -3.466 30.073 1.00 17.54 ATOM 213 CZ PHE B 442 98.041 -3.913 29.202 1.00 17.78 ATOM 214 N CYS B 443 97.767 0.867 32.146 1.00 16.02 ATOM 215 CA CYS B 443 96.839 1.599 31.250 1.00 14.33 ATOM 216 C CYS B 443 97.448 2.819 30.559 1.00 15.52 ATOM 217 O CYS B 443 96.973 3.252 29.510 1.00 13.72 ATOM 218 CB CYS B 443 95.586 2.036 32.020 1.00 15.61 ATOM 219 SG CYS B 443 94.524 0.654 32.462 1.00 17.19 ATOM 220 N HIS B 444 98.538 3.347 31.117 1.00 16.27 ATOM 221 CA HIS B 444 99.294 4.426 30.471 1.00 15.10 ATOM 222 C HIS B 444 99.888 4.012 29.122 1.00 15.20 ATOM 223 O HIS B 444 100.019 4.839 28.204 1.00 14.71 ATOM 224 CB HIS B 444 100.407 4.936 31.412 1.00 15.45 ATOM 225 CG HIS B 444 99.943 5.977 32.380 1.00 13.29 ATOM 226 ND1 HIS B 444 99.261 7.102 31.981 1.00 14.67 ATOM 227 CD2 HIS B 444 99.906 5.978 33.733 1.00 14.97 ATOM 228 CE1 HIS B 444 98.866 7.777 33.045 1.00 18.82 ATOM 229 NE2 HIS B 444 99.315 7.155 34.121 1.00 18.95 ATOM 230 N SER B 445 100.139 2.709 28.978 1.00 16.17 ATOM 231 CA SER B 445 100.811 2.181 27.792 0.24 17.75 ATOM 232 C SER B 445 99.841 2.080 26.619 1.00 21.02 ATOM 233 O SER B 445 100.248 1.783 25.508 1.00 29.05 ATOM 234 CB SER B 445 101.402 0.793 28.070 0.24 17.96 ATOM 235 OG SER B 445 102.516 0.847 28.941 0.24 16.52 ATOM 236 N LEU B 446 98.558 2.329 26.872 1.00 22.12 ATOM 237 CA LEU B 446 97.496 1.968 25.930 1.00 29.44 ATOM 238 C LEU B 446 96.827 3.164 25.235 1.00 31.20 ATOM 239 O LEU B 446 96.774 4.320 25.703 1.00 24.16 ATOM 240 CB LEU B 446 96.435 1.130 26.638 1.00 22.91 ATOM 241 CG LEU B 446 96.953 -0.102 27.372 1.00 23.01 ATOM 242 CD1 LEU B 446 95.760 -0.871 27.910 1.00 28.17 ATOM 243 CD2 LEU B 446 97.777 -0.995 26.472 1.00 26.12 ATOM 244 OXT LEU B 446 96.282 2.938 24.149 1.00 40.56 TER