HEADER OXIDOREDUCTASE 12-FEB-15 4Y67 TITLE Structure of Plasmodium falciparum DXR in complex with a TITLE 2 beta-substituted fosmidomycin analogue, RC176, and manganese COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.267; COMPND 5 ENGINEERED: YES; COMPND 6 Mature protein lacks signal and apicoplast targeting sequences; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.60 ANGSTORMS DBREF 4Y67 A 75 488 UNP Q8IKG4 DXR_PLAF7 75 488 SEQRES 1 A 30 SER GLU ASN SER GLU ASP LEU MET LYS GLN ILE LEU GLN SEQRES 2 A 30 ILE HIS SER TRP ALA LYS ASP LYS ALA THR ASP ILE TYR SEQRES 3 A 30 ASN LYS HIS ASN ATOM 1 N SER A 457 24.530 34.155 30.514 1.00 18.30 ATOM 2 CA SER A 457 25.978 33.971 30.437 0.50 18.81 ATOM 3 C SER A 457 26.440 33.907 28.992 1.00 20.41 ATOM 4 O SER A 457 25.860 33.165 28.191 1.00 18.74 ATOM 5 CB SER A 457 26.382 32.665 31.124 0.50 17.91 ATOM 6 OG SER A 457 26.091 32.679 32.511 0.50 16.53 ATOM 7 N GLU A 458 27.521 34.644 28.679 1.00 22.49 ATOM 8 CA GLU A 458 28.143 34.583 27.354 1.00 26.96 ATOM 9 C GLU A 458 28.967 33.323 27.186 1.00 24.90 ATOM 10 O GLU A 458 29.122 32.818 26.086 1.00 26.92 ATOM 11 CB GLU A 458 29.100 35.753 27.160 1.00 30.12 ATOM 12 CG GLU A 458 28.435 37.103 27.185 1.00 36.45 ATOM 13 CD GLU A 458 27.630 37.384 25.935 1.00 40.75 ATOM 14 OE1 GLU A 458 27.469 36.462 25.106 1.00 46.95 ATOM 15 OE2 GLU A 458 27.164 38.537 25.781 1.00 47.98 ATOM 16 N ASN A 459 29.531 32.860 28.287 1.00 22.45 ATOM 17 CA ASN A 459 30.429 31.729 28.309 1.00 23.41 ATOM 18 C ASN A 459 29.611 30.438 28.258 1.00 21.82 ATOM 19 O ASN A 459 28.725 30.249 29.056 1.00 19.43 ATOM 20 CB ASN A 459 31.248 31.836 29.598 1.00 25.13 ATOM 21 CG ASN A 459 32.145 30.659 29.843 1.00 25.16 ATOM 22 OD1 ASN A 459 31.689 29.577 30.143 1.00 24.64 ATOM 23 ND2 ASN A 459 33.458 30.881 29.736 1.00 27.67 ATOM 24 N SER A 460 29.925 29.562 27.320 1.00 21.32 ATOM 25 CA SER A 460 29.170 28.316 27.129 1.00 21.64 ATOM 26 C SER A 460 29.042 27.442 28.378 1.00 20.56 ATOM 27 O SER A 460 27.969 26.902 28.668 1.00 20.50 ATOM 28 CB SER A 460 29.808 27.520 25.984 1.00 23.57 ATOM 29 OG SER A 460 29.350 26.199 25.944 1.00 26.67 ATOM 30 N GLU A 461 30.138 27.275 29.103 1.00 19.09 ATOM 31 CA GLU A 461 30.161 26.427 30.293 1.00 17.38 ATOM 32 C GLU A 461 29.334 27.081 31.404 1.00 17.14 ATOM 33 O GLU A 461 28.601 26.393 32.131 1.00 18.52 ATOM 34 CB GLU A 461 31.619 26.168 30.717 1.00 17.83 ATOM 35 CG GLU A 461 32.325 25.179 29.804 1.00 17.75 ATOM 36 CD GLU A 461 33.776 24.894 30.191 1.00 18.37 ATOM 37 OE1 GLU A 461 34.525 24.389 29.301 1.00 18.49 ATOM 38 OE2 GLU A 461 34.141 25.147 31.359 1.00 17.90 ATOM 39 N ASP A 462 29.428 28.405 31.509 1.00 17.44 ATOM 40 CA ASP A 462 28.708 29.151 32.544 1.00 17.53 ATOM 41 C ASP A 462 27.214 29.072 32.242 1.00 16.79 ATOM 42 O ASP A 462 26.375 29.007 33.162 1.00 17.82 ATOM 43 CB ASP A 462 29.130 30.625 32.570 1.00 19.30 ATOM 44 CG ASP A 462 30.477 30.847 33.235 1.00 22.00 ATOM 45 OD1 ASP A 462 30.963 29.939 33.930 1.00 22.88 ATOM 46 OD2 ASP A 462 31.026 31.940 33.064 1.00 25.51 ATOM 47 N LEU A 463 26.902 29.067 30.956 1.00 15.98 ATOM 48 CA LEU A 463 25.504 29.100 30.493 1.00 15.69 ATOM 49 C LEU A 463 24.834 27.795 30.830 1.00 16.57 ATOM 50 O LEU A 463 23.684 27.773 31.339 1.00 14.90 ATOM 51 CB LEU A 463 25.443 29.356 28.988 1.00 15.57 ATOM 52 CG LEU A 463 24.051 29.325 28.341 1.00 16.07 ATOM 53 CD1 LEU A 463 23.083 30.226 29.102 1.00 16.19 ATOM 54 CD2 LEU A 463 24.161 29.687 26.862 1.00 16.03 ATOM 55 N MET A 464 25.513 26.691 30.549 1.00 16.27 ATOM 56 CA MET A 464 24.971 25.401 30.941 1.00 18.51 ATOM 57 C MET A 464 24.741 25.287 32.463 1.00 18.78 ATOM 58 O MET A 464 23.732 24.734 32.911 1.00 16.96 ATOM 59 CB MET A 464 25.874 24.294 30.446 1.00 21.05 ATOM 60 CG MET A 464 25.304 22.937 30.717 1.00 23.67 ATOM 61 SD MET A 464 23.813 22.624 29.749 1.00 30.87 ATOM 62 CE MET A 464 24.234 20.866 29.575 1.00 35.66 ATOM 63 N LYS A 465 25.689 25.778 33.273 1.00 18.51 ATOM 64 CA LYS A 465 25.519 25.725 34.716 1.00 18.70 ATOM 65 C LYS A 465 24.331 26.575 35.157 1.00 16.33 ATOM 66 O LYS A 465 23.628 26.226 36.089 1.00 15.33 ATOM 67 CB LYS A 465 26.788 26.175 35.440 1.00 21.18 ATOM 68 CG LYS A 465 27.887 25.133 35.427 1.00 24.23 ATOM 69 CD LYS A 465 28.927 25.515 36.462 1.00 29.13 ATOM 70 CE LYS A 465 30.311 25.456 35.893 1.00 30.69 ATOM 71 NZ LYS A 465 31.311 25.930 36.904 1.00 30.92 ATOM 72 N GLN A 466 24.127 27.710 34.480 1.00 16.48 ATOM 73 CA GLN A 466 23.008 28.587 34.759 1.00 16.13 ATOM 74 C GLN A 466 21.670 27.864 34.465 1.00 14.98 ATOM 75 O GLN A 466 20.750 27.848 35.297 1.00 14.77 ATOM 76 CB GLN A 466 23.198 29.829 33.916 1.00 18.39 ATOM 77 CG GLN A 466 22.234 30.919 34.135 1.00 20.10 ATOM 78 CD GLN A 466 22.712 32.205 33.493 1.00 20.21 ATOM 79 OE1 GLN A 466 23.513 32.205 32.548 1.00 18.65 ATOM 80 NE2 GLN A 466 22.219 33.300 34.004 1.00 20.23 ATOM 81 N ILE A 467 21.586 27.188 33.321 1.00 14.26 ATOM 82 CA ILE A 467 20.390 26.393 33.013 1.00 13.88 ATOM 83 C ILE A 467 20.120 25.300 34.071 1.00 14.02 ATOM 84 O ILE A 467 18.979 25.094 34.508 1.00 13.76 ATOM 85 CB ILE A 467 20.501 25.797 31.594 1.00 13.53 ATOM 86 CG1 ILE A 467 20.374 26.921 30.538 1.00 14.17 ATOM 87 CG2 ILE A 467 19.477 24.694 31.365 1.00 13.92 ATOM 88 CD1 ILE A 467 21.008 26.540 29.208 1.00 14.81 ATOM 89 N LEU A 468 21.149 24.565 34.462 1.00 14.77 ATOM 90 CA LEU A 468 21.005 23.493 35.441 1.00 15.70 ATOM 91 C LEU A 468 20.568 24.070 36.784 1.00 15.77 ATOM 92 O LEU A 468 19.741 23.479 37.470 1.00 15.38 ATOM 93 CB LEU A 468 22.312 22.699 35.586 1.00 17.29 ATOM 94 CG LEU A 468 22.685 21.810 34.392 1.00 19.44 ATOM 95 CD1 LEU A 468 24.011 21.086 34.635 1.00 20.88 ATOM 96 CD2 LEU A 468 21.600 20.811 34.049 1.00 21.17 ATOM 97 N GLN A 469 21.134 25.214 37.155 1.00 16.25 ATOM 98 CA GLN A 469 20.810 25.831 38.445 1.00 17.68 ATOM 99 C GLN A 469 19.350 26.243 38.463 1.00 16.53 ATOM 100 O GLN A 469 18.645 26.035 39.457 1.00 16.53 ATOM 101 CB GLN A 469 21.688 27.055 38.719 1.00 20.09 ATOM 102 CG GLN A 469 21.387 27.759 40.044 1.00 23.71 ATOM 103 CD GLN A 469 20.438 28.954 39.930 1.00 25.11 ATOM 104 OE1 GLN A 469 19.605 29.199 40.815 1.00 31.25 ATOM 105 NE2 GLN A 469 20.606 29.741 38.883 1.00 28.72 ATOM 106 N ILE A 470 18.921 26.883 37.375 1.00 15.00 ATOM 107 CA ILE A 470 17.559 27.346 37.258 1.00 14.07 ATOM 108 C ILE A 470 16.578 26.179 37.234 1.00 14.27 ATOM 109 O ILE A 470 15.523 26.251 37.869 1.00 14.63 ATOM 110 CB ILE A 470 17.395 28.298 36.063 1.00 13.85 ATOM 111 CG1 ILE A 470 18.250 29.545 36.316 1.00 14.10 ATOM 112 CG2 ILE A 470 15.944 28.703 35.879 1.00 13.61 ATOM 113 CD1 ILE A 470 18.474 30.450 35.125 1.00 14.83 ATOM 114 N HIS A 471 16.905 25.112 36.514 1.00 13.61 ATOM 115 CA HIS A 471 16.073 23.913 36.458 1.00 15.16 ATOM 116 C HIS A 471 15.864 23.336 37.857 1.00 16.54 ATOM 117 O HIS A 471 14.719 23.051 38.291 1.00 16.07 ATOM 118 CB HIS A 471 16.749 22.892 35.507 1.00 15.45 ATOM 119 CG HIS A 471 16.085 21.551 35.462 1.00 15.94 ATOM 120 ND1 HIS A 471 15.010 21.284 34.648 1.00 15.87 ATOM 121 CD2 HIS A 471 16.359 20.391 36.111 1.00 16.49 ATOM 122 CE1 HIS A 471 14.634 20.032 34.805 1.00 16.00 ATOM 123 NE2 HIS A 471 15.447 19.460 35.676 1.00 16.79 ATOM 124 N SER A 472 16.965 23.183 38.586 0.50 16.39 ATOM 125 CA SER A 472 16.915 22.656 39.930 0.50 17.22 ATOM 126 C SER A 472 16.108 23.563 40.871 0.50 17.09 ATOM 127 O SER A 472 15.276 23.091 41.640 0.50 17.33 ATOM 128 CB SER A 472 18.326 22.470 40.476 0.50 17.88 ATOM 129 OG SER A 472 18.268 21.909 41.765 0.50 18.30 ATOM 130 N TRP A 473 16.361 24.862 40.815 1.00 17.58 ATOM 131 CA TRP A 473 15.627 25.798 41.654 1.00 16.79 ATOM 132 C TRP A 473 14.124 25.657 41.383 1.00 17.93 ATOM 133 O TRP A 473 13.328 25.627 42.306 1.00 16.97 ATOM 134 CB TRP A 473 16.073 27.237 41.397 1.00 17.59 ATOM 135 CG TRP A 473 15.115 28.245 41.967 1.00 17.95 ATOM 136 CD1 TRP A 473 15.112 28.739 43.240 1.00 19.57 ATOM 137 CD2 TRP A 473 14.009 28.852 41.299 1.00 18.72 ATOM 138 NE1 TRP A 473 14.060 29.621 43.408 1.00 20.68 ATOM 139 CE2 TRP A 473 13.369 29.714 42.228 1.00 18.62 ATOM 140 CE3 TRP A 473 13.498 28.768 40.013 1.00 17.31 ATOM 141 CZ2 TRP A 473 12.244 30.462 41.893 1.00 19.85 ATOM 142 CZ3 TRP A 473 12.374 29.495 39.688 1.00 17.30 ATOM 143 CH2 TRP A 473 11.760 30.338 40.622 1.00 18.38 ATOM 144 N ALA A 474 13.753 25.595 40.112 1.00 16.79 ATOM 145 CA ALA A 474 12.333 25.609 39.730 1.00 16.66 ATOM 146 C ALA A 474 11.656 24.330 40.195 1.00 16.90 ATOM 147 O ALA A 474 10.485 24.347 40.615 1.00 16.40 ATOM 148 CB ALA A 474 12.181 25.782 38.222 1.00 15.55 ATOM 149 N LYS A 475 12.350 23.206 40.113 1.00 17.27 ATOM 150 CA LYS A 475 11.742 21.974 40.586 1.00 18.82 ATOM 151 C LYS A 475 11.503 22.124 42.087 1.00 20.46 ATOM 152 O LYS A 475 10.439 21.760 42.597 1.00 18.62 ATOM 153 CB LYS A 475 12.589 20.750 40.294 1.00 19.54 ATOM 154 CG LYS A 475 12.680 20.394 38.829 1.00 19.74 ATOM 155 CD LYS A 475 13.207 18.981 38.644 1.00 21.40 ATOM 156 CE LYS A 475 14.634 18.873 39.152 1.00 23.34 ATOM 157 NZ LYS A 475 15.012 17.436 39.219 1.00 26.52 ATOM 158 N ASP A 476 12.515 22.637 42.790 1.00 21.19 ATOM 159 CA ASP A 476 12.414 22.760 44.235 1.00 22.08 ATOM 160 C ASP A 476 11.271 23.682 44.606 1.00 20.11 ATOM 161 O ASP A 476 10.537 23.414 45.550 1.00 20.83 ATOM 162 CB ASP A 476 13.726 23.275 44.828 1.00 23.97 ATOM 163 CG ASP A 476 14.811 22.249 44.803 1.00 25.75 ATOM 164 OD1 ASP A 476 14.534 21.044 44.598 1.00 28.80 ATOM 165 OD2 ASP A 476 15.969 22.671 44.982 1.00 28.13 ATOM 166 N LYS A 477 11.116 24.763 43.860 1.00 19.97 ATOM 167 CA LYS A 477 10.091 25.755 44.162 1.00 20.31 ATOM 168 C LYS A 477 8.693 25.129 43.938 1.00 20.62 ATOM 169 O LYS A 477 7.795 25.283 44.774 1.00 20.70 ATOM 170 CB LYS A 477 10.292 27.012 43.322 1.00 20.05 ATOM 171 CG LYS A 477 9.294 28.117 43.589 1.00 22.14 ATOM 172 CD LYS A 477 9.517 28.794 44.937 1.00 23.10 ATOM 173 CE LYS A 477 8.788 30.125 44.957 1.00 26.37 ATOM 174 NZ LYS A 477 8.972 30.939 46.198 1.00 29.32 ATOM 175 N ALA A 478 8.524 24.375 42.842 1.00 18.94 ATOM 176 CA ALA A 478 7.268 23.664 42.613 1.00 17.94 ATOM 177 C ALA A 478 6.933 22.736 43.791 1.00 19.03 ATOM 178 O ALA A 478 5.802 22.727 44.272 1.00 18.88 ATOM 179 CB ALA A 478 7.323 22.844 41.317 1.00 17.92 ATOM 180 N THR A 479 7.909 21.922 44.211 1.00 19.00 ATOM 181 CA THR A 479 7.723 20.955 45.293 1.00 20.43 ATOM 182 C THR A 479 7.389 21.658 46.617 1.00 21.89 ATOM 183 O THR A 479 6.545 21.191 47.389 1.00 23.76 ATOM 184 CB THR A 479 8.979 20.108 45.474 1.00 20.76 ATOM 185 OG1 THR A 479 9.204 19.351 44.289 1.00 19.86 ATOM 186 CG2 THR A 479 8.866 19.151 46.689 1.00 21.87 ATOM 187 N ASP A 480 8.054 22.776 46.868 0.50 22.19 ATOM 188 CA ASP A 480 7.823 23.556 48.093 0.50 22.84 ATOM 189 C ASP A 480 6.406 24.131 48.109 0.50 24.41 ATOM 190 O ASP A 480 5.772 24.210 49.162 0.50 24.72 ATOM 191 CB ASP A 480 8.848 24.689 48.214 0.50 23.15 ATOM 192 CG ASP A 480 10.213 24.207 48.692 0.50 22.75 ATOM 193 OD1 ASP A 480 10.347 23.045 49.123 0.50 24.51 ATOM 194 OD2 ASP A 480 11.167 25.007 48.629 0.50 23.32 ATOM 195 N ILE A 481 5.917 24.552 46.946 1.00 24.12 ATOM 196 CA ILE A 481 4.550 25.048 46.826 1.00 24.36 ATOM 197 C ILE A 481 3.558 23.941 47.111 1.00 24.79 ATOM 198 O ILE A 481 2.557 24.157 47.826 1.00 25.60 ATOM 199 CB ILE A 481 4.295 25.660 45.447 1.00 24.30 ATOM 200 CG1 ILE A 481 5.048 26.985 45.324 1.00 24.75 ATOM 201 CG2 ILE A 481 2.804 25.904 45.234 1.00 25.02 ATOM 202 CD1 ILE A 481 5.208 27.486 43.913 1.00 24.45 ATOM 203 N TYR A 482 3.825 22.752 46.577 1.00 22.46 ATOM 204 CA TYR A 482 2.972 21.619 46.830 1.00 24.17 ATOM 205 C TYR A 482 2.963 21.337 48.329 1.00 27.21 ATOM 206 O TYR A 482 1.897 21.209 48.937 1.00 27.32 ATOM 207 CB TYR A 482 3.467 20.391 46.068 1.00 24.14 ATOM 208 CG TYR A 482 2.880 19.121 46.564 1.00 25.06 ATOM 209 CD1 TYR A 482 1.535 18.835 46.355 1.00 24.24 ATOM 210 CD2 TYR A 482 3.647 18.206 47.263 1.00 25.08 ATOM 211 CE1 TYR A 482 0.982 17.668 46.811 1.00 25.48 ATOM 212 CE2 TYR A 482 3.109 17.028 47.719 1.00 26.45 ATOM 213 CZ TYR A 482 1.772 16.774 47.510 1.00 26.26 ATOM 214 OH TYR A 482 1.215 15.621 47.981 1.00 28.53 ATOM 215 N ASN A 483 4.157 21.256 48.919 1.00 29.45 ATOM 216 CA ASN A 483 4.297 20.838 50.318 1.00 31.71 ATOM 217 C ASN A 483 3.590 21.793 51.265 1.00 34.52 ATOM 218 O ASN A 483 2.984 21.344 52.241 1.00 37.96 ATOM 219 CB ASN A 483 5.764 20.715 50.720 1.00 31.74 ATOM 220 CG ASN A 483 6.386 19.432 50.248 1.00 28.67 ATOM 221 OD1 ASN A 483 5.708 18.452 49.994 1.00 31.30 ATOM 222 ND2 ASN A 483 7.704 19.426 50.156 1.00 30.74 ATOM 223 N LYS A 484 3.651 23.092 50.978 1.00 37.23 ATOM 224 CA LYS A 484 2.937 24.078 51.778 1.00 42.77 ATOM 225 C LYS A 484 1.447 23.826 51.753 1.00 44.81 ATOM 226 O LYS A 484 0.793 23.833 52.788 1.00 45.83 ATOM 227 CB LYS A 484 3.165 25.495 51.272 1.00 46.04 ATOM 228 CG LYS A 484 4.060 26.337 52.163 1.00 50.53 ATOM 229 CD LYS A 484 5.428 26.534 51.526 1.00 53.74 ATOM 230 CE LYS A 484 6.510 26.774 52.566 1.00 56.71 ATOM 231 NZ LYS A 484 6.927 28.203 52.634 1.00 60.07 ATOM 232 N HIS A 485 0.911 23.632 50.558 1.00 45.36 ATOM 233 CA HIS A 485 -0.522 23.533 50.382 1.00 50.21 ATOM 234 C HIS A 485 -0.996 22.164 50.875 1.00 49.05 ATOM 235 O HIS A 485 -2.185 21.941 51.085 1.00 51.39 ATOM 236 CB HIS A 485 -0.877 23.766 48.905 1.00 53.52 ATOM 237 CG HIS A 485 -2.298 24.181 48.683 1.00 59.48 ATOM 238 ND1 HIS A 485 -3.303 23.276 48.412 1.00 61.23 ATOM 239 CD2 HIS A 485 -2.883 25.404 48.685 1.00 62.36 ATOM 240 CE1 HIS A 485 -4.445 23.922 48.257 1.00 61.76 ATOM 241 NE2 HIS A 485 -4.218 25.213 48.420 1.00 65.50 ATOM 242 N ASN A 486 -0.051 21.259 51.084 1.00 46.63 ATOM 243 CA ASN A 486 -0.365 19.886 51.423 1.00 48.43 ATOM 244 C ASN A 486 -0.445 19.653 52.930 1.00 49.14 ATOM 245 O ASN A 486 0.448 20.051 53.670 1.00 45.24 ATOM 246 CB ASN A 486 0.696 18.972 50.843 1.00 50.99 ATOM 247 CG ASN A 486 0.359 17.514 51.023 1.00 53.48 ATOM 248 OD1 ASN A 486 -0.812 17.134 51.044 1.00 52.81 ATOM 249 ND2 ASN A 486 1.387 16.685 51.172 1.00 56.20 TER