HEADER OXIDOREDUCTASE 12-FEB-15 4Y67 TITLE Structure of Plasmodium falciparum DXR in complex with a TITLE 2 beta-substituted fosmidomycin analogue, RC176, and manganese COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.267; COMPND 5 ENGINEERED: YES; COMPND 6 Mature protein lacks signal and apicoplast targeting sequences; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.60 ANGSTORMS DBREF 4Y67 B 75 488 UNP Q8IKG4 DXR_PLAF7 75 488 SEQRES 1 B 30 SER GLU ASN SER GLU ASP LEU MET LYS GLN ILE LEU GLN SEQRES 2 B 30 ILE HIS SER TRP ALA LYS ASP LYS ALA THR ASP ILE TYR SEQRES 3 B 30 ASN LYS HIS ASN ATOM 1 N SER B 457 5.793 10.554 -35.375 1.00 26.34 ATOM 2 CA SER B 457 6.832 11.225 -36.146 1.00 29.43 ATOM 3 C SER B 457 8.049 11.551 -35.298 1.00 29.73 ATOM 4 O SER B 457 7.922 12.094 -34.208 1.00 28.17 ATOM 5 CB SER B 457 6.315 12.536 -36.713 1.00 29.43 ATOM 6 OG SER B 457 5.339 12.361 -37.708 1.00 33.88 ATOM 7 N GLU B 458 9.230 11.247 -35.828 1.00 32.36 ATOM 8 CA GLU B 458 10.488 11.599 -35.174 1.00 33.58 ATOM 9 C GLU B 458 10.754 13.089 -35.316 1.00 31.97 ATOM 10 O GLU B 458 11.279 13.715 -34.413 1.00 32.63 ATOM 11 CB GLU B 458 11.652 10.825 -35.788 1.00 35.72 ATOM 12 CG GLU B 458 11.588 9.332 -35.560 1.00 41.09 ATOM 13 CD GLU B 458 11.772 8.956 -34.102 1.00 45.07 ATOM 14 OE1 GLU B 458 11.845 9.876 -33.250 1.00 48.67 ATOM 15 OE2 GLU B 458 11.842 7.736 -33.813 1.00 50.23 ATOM 16 N ASN B 459 10.361 13.647 -36.445 1.00 29.99 ATOM 17 CA ASN B 459 10.605 15.037 -36.753 1.00 30.67 ATOM 18 C ASN B 459 9.619 16.012 -36.081 1.00 32.17 ATOM 19 O ASN B 459 8.415 15.814 -36.139 1.00 30.03 ATOM 20 CB ASN B 459 10.515 15.184 -38.253 1.00 33.91 ATOM 21 CG ASN B 459 10.896 16.560 -38.725 1.00 36.63 ATOM 22 OD1 ASN B 459 10.203 17.549 -38.474 1.00 39.86 ATOM 23 ND2 ASN B 459 12.003 16.630 -39.438 1.00 41.55 ATOM 24 N SER B 460 10.149 17.081 -35.491 1.00 32.38 ATOM 25 CA SER B 460 9.382 18.019 -34.671 1.00 32.86 ATOM 26 C SER B 460 8.281 18.723 -35.470 1.00 35.35 ATOM 27 O SER B 460 7.128 18.798 -35.031 1.00 35.01 ATOM 28 CB SER B 460 10.345 19.033 -34.029 1.00 33.56 ATOM 29 OG SER B 460 9.841 20.349 -34.004 1.00 33.19 ATOM 30 N GLU B 461 8.631 19.213 -36.652 1.00 38.17 ATOM 31 CA GLU B 461 7.662 19.853 -37.528 1.00 40.36 ATOM 32 C GLU B 461 6.613 18.868 -38.008 1.00 35.68 ATOM 33 O GLU B 461 5.443 19.201 -38.080 1.00 36.63 ATOM 34 CB GLU B 461 8.353 20.472 -38.729 1.00 45.07 ATOM 35 CG GLU B 461 9.110 21.728 -38.370 1.00 50.95 ATOM 36 CD GLU B 461 9.670 22.442 -39.587 1.00 57.14 ATOM 37 OE1 GLU B 461 10.703 23.130 -39.439 1.00 59.14 ATOM 38 OE2 GLU B 461 9.084 22.307 -40.688 1.00 63.29 ATOM 39 N ASP B 462 7.042 17.660 -38.343 1.00 33.90 ATOM 40 CA ASP B 462 6.123 16.603 -38.754 1.00 32.81 ATOM 41 C ASP B 462 5.184 16.194 -37.629 1.00 30.99 ATOM 42 O ASP B 462 4.020 15.858 -37.861 1.00 28.13 ATOM 43 CB ASP B 462 6.885 15.358 -39.175 1.00 32.37 ATOM 44 CG ASP B 462 7.656 15.553 -40.447 1.00 36.44 ATOM 45 OD1 ASP B 462 7.412 16.576 -41.126 1.00 36.45 ATOM 46 OD2 ASP B 462 8.499 14.672 -40.747 1.00 36.97 ATOM 47 N LEU B 463 5.716 16.162 -36.417 1.00 28.83 ATOM 48 CA LEU B 463 4.950 15.710 -35.275 1.00 27.52 ATOM 49 C LEU B 463 3.823 16.714 -35.022 1.00 27.27 ATOM 50 O LEU B 463 2.680 16.338 -34.753 1.00 23.84 ATOM 51 CB LEU B 463 5.863 15.564 -34.052 1.00 26.85 ATOM 52 CG LEU B 463 5.228 15.160 -32.707 1.00 26.31 ATOM 53 CD1 LEU B 463 4.405 13.888 -32.835 1.00 25.18 ATOM 54 CD2 LEU B 463 6.298 14.973 -31.644 1.00 25.29 ATOM 55 N MET B 464 4.146 17.993 -35.126 1.00 26.52 ATOM 56 CA MET B 464 3.147 19.011 -34.932 1.00 30.09 ATOM 57 C MET B 464 2.034 18.885 -35.972 1.00 29.36 ATOM 58 O MET B 464 0.846 19.005 -35.660 1.00 25.62 ATOM 59 CB MET B 464 3.785 20.384 -35.041 1.00 33.54 ATOM 60 CG MET B 464 2.792 21.515 -34.979 1.00 40.07 ATOM 61 SD MET B 464 2.122 21.742 -33.312 1.00 51.31 ATOM 62 CE MET B 464 2.168 23.558 -33.249 1.00 51.14 ATOM 63 N LYS B 465 2.413 18.681 -37.226 1.00 29.37 ATOM 64 CA LYS B 465 1.401 18.516 -38.258 1.00 28.29 ATOM 65 C LYS B 465 0.527 17.321 -37.984 1.00 25.28 ATOM 66 O LYS B 465 -0.698 17.380 -38.142 1.00 25.98 ATOM 67 CB LYS B 465 2.062 18.366 -39.610 1.00 33.86 ATOM 68 CG LYS B 465 2.626 19.669 -40.120 1.00 36.46 ATOM 69 CD LYS B 465 2.995 19.521 -41.584 1.00 41.41 ATOM 70 CE LYS B 465 4.303 20.206 -41.906 1.00 43.21 ATOM 71 NZ LYS B 465 4.670 19.904 -43.318 1.00 47.54 ATOM 72 N GLN B 466 1.148 16.225 -37.577 1.00 23.37 ATOM 73 CA GLN B 466 0.430 15.024 -37.242 1.00 22.32 ATOM 74 C GLN B 466 -0.602 15.284 -36.109 1.00 21.55 ATOM 75 O GLN B 466 -1.777 14.935 -36.226 1.00 21.70 ATOM 76 CB GLN B 466 1.432 13.970 -36.852 1.00 23.90 ATOM 77 CG GLN B 466 0.878 12.620 -36.542 1.00 24.31 ATOM 78 CD GLN B 466 2.003 11.630 -36.371 1.00 25.70 ATOM 79 OE1 GLN B 466 3.156 12.019 -36.055 1.00 25.97 ATOM 80 NE2 GLN B 466 1.698 10.362 -36.553 1.00 24.56 ATOM 81 N ILE B 467 -0.176 15.943 -35.031 1.00 20.22 ATOM 82 CA ILE B 467 -1.108 16.309 -33.957 1.00 19.14 ATOM 83 C ILE B 467 -2.293 17.170 -34.467 1.00 19.86 ATOM 84 O ILE B 467 -3.475 16.935 -34.135 1.00 18.52 ATOM 85 CB ILE B 467 -0.339 17.067 -32.851 1.00 18.60 ATOM 86 CG1 ILE B 467 0.579 16.090 -32.096 1.00 18.50 ATOM 87 CG2 ILE B 467 -1.314 17.790 -31.911 1.00 18.68 ATOM 88 CD1 ILE B 467 1.702 16.793 -31.342 1.00 18.03 ATOM 89 N LEU B 468 -1.986 18.191 -35.252 1.00 21.30 ATOM 90 CA LEU B 468 -3.021 19.054 -35.794 1.00 23.75 ATOM 91 C LEU B 468 -4.001 18.266 -36.680 1.00 24.03 ATOM 92 O LEU B 468 -5.223 18.501 -36.649 1.00 25.14 ATOM 93 CB LEU B 468 -2.400 20.199 -36.583 1.00 24.71 ATOM 94 CG LEU B 468 -1.656 21.278 -35.782 1.00 27.98 ATOM 95 CD1 LEU B 468 -1.009 22.330 -36.681 1.00 29.26 ATOM 96 CD2 LEU B 468 -2.594 21.942 -34.799 1.00 28.92 ATOM 97 N GLN B 469 -3.483 17.329 -37.466 1.00 25.12 ATOM 98 CA GLN B 469 -4.349 16.523 -38.335 1.00 25.51 ATOM 99 C GLN B 469 -5.277 15.657 -37.528 1.00 24.31 ATOM 100 O GLN B 469 -6.461 15.523 -37.856 1.00 23.35 ATOM 101 CB GLN B 469 -3.529 15.637 -39.303 1.00 28.11 ATOM 102 CG GLN B 469 -4.369 14.637 -40.128 1.00 30.03 ATOM 103 CD GLN B 469 -4.292 13.187 -39.636 1.00 35.20 ATOM 104 OE1 GLN B 469 -5.309 12.457 -39.572 1.00 39.58 ATOM 105 NE2 GLN B 469 -3.080 12.738 -39.314 1.00 38.46 ATOM 106 N ILE B 470 -4.733 15.028 -36.492 1.00 22.15 ATOM 107 CA ILE B 470 -5.504 14.158 -35.638 1.00 20.65 ATOM 108 C ILE B 470 -6.546 14.957 -34.888 1.00 20.09 ATOM 109 O ILE B 470 -7.690 14.516 -34.780 1.00 21.43 ATOM 110 CB ILE B 470 -4.577 13.371 -34.712 1.00 20.06 ATOM 111 CG1 ILE B 470 -3.698 12.460 -35.575 1.00 20.72 ATOM 112 CG2 ILE B 470 -5.379 12.568 -33.721 1.00 19.99 ATOM 113 CD1 ILE B 470 -2.607 11.738 -34.815 1.00 20.69 ATOM 114 N HIS B 471 -6.174 16.155 -34.445 1.00 19.76 ATOM 115 CA HIS B 471 -7.106 17.060 -33.759 1.00 20.72 ATOM 116 C HIS B 471 -8.310 17.380 -34.675 1.00 23.36 ATOM 117 O HIS B 471 -9.481 17.170 -34.287 1.00 20.57 ATOM 118 CB HIS B 471 -6.354 18.326 -33.339 1.00 21.06 ATOM 119 CG HIS B 471 -7.213 19.366 -32.692 1.00 20.23 ATOM 120 ND1 HIS B 471 -7.629 19.278 -31.383 1.00 21.79 ATOM 121 CD2 HIS B 471 -7.702 20.535 -33.165 1.00 20.34 ATOM 122 CE1 HIS B 471 -8.366 20.333 -31.085 1.00 19.88 ATOM 123 NE2 HIS B 471 -8.425 21.113 -32.149 1.00 20.11 ATOM 124 N SER B 472 -8.003 17.815 -35.894 1.00 23.66 ATOM 125 CA SER B 472 -9.006 18.186 -36.901 1.00 26.60 ATOM 126 C SER B 472 -9.914 17.026 -37.295 1.00 25.61 ATOM 127 O SER B 472 -11.131 17.190 -37.438 1.00 24.79 ATOM 128 CB SER B 472 -8.297 18.664 -38.155 1.00 28.72 ATOM 129 OG SER B 472 -9.200 19.343 -38.995 1.00 33.96 ATOM 130 N TRP B 473 -9.312 15.868 -37.518 1.00 25.93 ATOM 131 CA TRP B 473 -10.057 14.658 -37.836 1.00 24.58 ATOM 132 C TRP B 473 -11.039 14.310 -36.708 1.00 25.00 ATOM 133 O TRP B 473 -12.232 14.002 -36.944 1.00 21.61 ATOM 134 CB TRP B 473 -9.104 13.471 -38.065 1.00 25.95 ATOM 135 CG TRP B 473 -9.827 12.183 -38.015 1.00 24.91 ATOM 136 CD1 TRP B 473 -10.493 11.584 -39.055 1.00 27.30 ATOM 137 CD2 TRP B 473 -10.019 11.334 -36.882 1.00 25.67 ATOM 138 NE1 TRP B 473 -11.067 10.417 -38.639 1.00 28.31 ATOM 139 CE2 TRP B 473 -10.816 10.245 -37.307 1.00 25.53 ATOM 140 CE3 TRP B 473 -9.605 11.379 -35.548 1.00 22.86 ATOM 141 CZ2 TRP B 473 -11.184 9.221 -36.457 1.00 25.28 ATOM 142 CZ3 TRP B 473 -9.976 10.376 -34.715 1.00 23.64 ATOM 143 CH2 TRP B 473 -10.780 9.306 -35.162 1.00 25.01 ATOM 144 N ALA B 474 -10.533 14.338 -35.473 1.00 23.82 ATOM 145 CA ALA B 474 -11.299 13.924 -34.311 1.00 22.15 ATOM 146 C ALA B 474 -12.487 14.869 -34.065 1.00 21.93 ATOM 147 O ALA B 474 -13.555 14.444 -33.610 1.00 20.56 ATOM 148 CB ALA B 474 -10.399 13.829 -33.077 1.00 21.44 ATOM 149 N LYS B 475 -12.308 16.140 -34.364 1.00 21.11 ATOM 150 CA LYS B 475 -13.415 17.067 -34.184 1.00 23.69 ATOM 151 C LYS B 475 -14.485 16.748 -35.215 1.00 23.74 ATOM 152 O LYS B 475 -15.680 16.729 -34.906 1.00 22.76 ATOM 153 CB LYS B 475 -12.972 18.504 -34.343 1.00 23.47 ATOM 154 CG LYS B 475 -12.117 19.011 -33.189 1.00 24.92 ATOM 155 CD LYS B 475 -12.116 20.521 -33.147 1.00 26.94 ATOM 156 CE LYS B 475 -11.373 21.106 -34.330 1.00 28.94 ATOM 157 NZ LYS B 475 -11.586 22.566 -34.411 1.00 30.62 ATOM 158 N ASP B 476 -14.050 16.503 -36.444 1.00 25.42 ATOM 159 CA ASP B 476 -15.006 16.229 -37.535 1.00 26.54 ATOM 160 C ASP B 476 -15.745 14.934 -37.311 1.00 25.99 ATOM 161 O ASP B 476 -16.940 14.834 -37.603 1.00 24.82 ATOM 162 CB ASP B 476 -14.292 16.209 -38.885 1.00 28.71 ATOM 163 CG ASP B 476 -13.859 17.578 -39.315 1.00 29.41 ATOM 164 OD1 ASP B 476 -14.333 18.550 -38.706 1.00 33.64 ATOM 165 OD2 ASP B 476 -13.026 17.689 -40.234 1.00 33.85 ATOM 166 N LYS B 477 -15.056 13.943 -36.761 1.00 24.02 ATOM 167 CA LYS B 477 -15.682 12.682 -36.447 1.00 23.63 ATOM 168 C LYS B 477 -16.754 12.865 -35.372 1.00 24.24 ATOM 169 O LYS B 477 -17.845 12.322 -35.507 1.00 23.90 ATOM 170 CB LYS B 477 -14.625 11.672 -36.002 1.00 25.74 ATOM 171 CG LYS B 477 -15.130 10.261 -35.744 1.00 27.26 ATOM 172 CD LYS B 477 -15.507 9.540 -37.036 1.00 30.73 ATOM 173 CE LYS B 477 -15.681 8.047 -36.786 1.00 34.22 ATOM 174 NZ LYS B 477 -16.095 7.278 -38.001 1.00 36.64 ATOM 175 N ALA B 478 -16.457 13.632 -34.302 1.00 20.95 ATOM 176 CA ALA B 478 -17.443 13.921 -33.269 1.00 20.22 ATOM 177 C ALA B 478 -18.687 14.598 -33.896 1.00 21.02 ATOM 178 O ALA B 478 -19.819 14.246 -33.616 1.00 21.84 ATOM 179 CB ALA B 478 -16.843 14.847 -32.221 1.00 19.80 ATOM 180 N THR B 479 -18.440 15.604 -34.702 1.00 22.13 ATOM 181 CA THR B 479 -19.499 16.351 -35.335 1.00 23.50 ATOM 182 C THR B 479 -20.353 15.460 -36.239 1.00 26.49 ATOM 183 O THR B 479 -21.593 15.551 -36.241 1.00 25.61 ATOM 184 CB THR B 479 -18.889 17.474 -36.137 1.00 23.45 ATOM 185 OG1 THR B 479 -18.297 18.390 -35.221 1.00 22.43 ATOM 186 CG2 THR B 479 -19.960 18.227 -36.981 1.00 23.47 ATOM 187 N ASP B 480 -19.684 14.602 -36.996 1.00 26.30 ATOM 188 CA ASP B 480 -20.368 13.663 -37.879 0.50 27.53 ATOM 189 C ASP B 480 -21.251 12.712 -37.094 1.00 28.29 ATOM 190 O ASP B 480 -22.388 12.426 -37.491 1.00 30.80 ATOM 191 CB ASP B 480 -19.343 12.858 -38.663 0.50 27.32 ATOM 192 CG ASP B 480 -18.895 13.561 -39.913 0.50 27.47 ATOM 193 OD1 ASP B 480 -19.532 14.561 -40.299 0.50 27.11 ATOM 194 OD2 ASP B 480 -17.902 13.097 -40.514 0.50 29.21 ATOM 195 N ILE B 481 -20.732 12.221 -35.973 1.00 25.86 ATOM 196 CA ILE B 481 -21.475 11.329 -35.123 1.00 26.80 ATOM 197 C ILE B 481 -22.720 12.039 -34.604 1.00 27.72 ATOM 198 O ILE B 481 -23.820 11.462 -34.592 1.00 25.36 ATOM 199 CB ILE B 481 -20.604 10.809 -33.966 1.00 28.01 ATOM 200 CG1 ILE B 481 -19.584 9.794 -34.497 1.00 28.29 ATOM 201 CG2 ILE B 481 -21.456 10.145 -32.906 1.00 27.15 ATOM 202 CD1 ILE B 481 -18.435 9.516 -33.544 1.00 28.38 ATOM 203 N TYR B 482 -22.547 13.297 -34.204 1.00 25.62 ATOM 204 CA TYR B 482 -23.661 14.114 -33.755 1.00 25.92 ATOM 205 C TYR B 482 -24.709 14.230 -34.872 1.00 28.12 ATOM 206 O TYR B 482 -25.892 13.973 -34.644 1.00 27.14 ATOM 207 CB TYR B 482 -23.192 15.515 -33.365 1.00 25.18 ATOM 208 CG TYR B 482 -24.322 16.503 -33.276 1.00 23.51 ATOM 209 CD1 TYR B 482 -25.297 16.369 -32.309 1.00 23.18 ATOM 210 CD2 TYR B 482 -24.436 17.545 -34.183 1.00 23.83 ATOM 211 CE1 TYR B 482 -26.345 17.260 -32.230 1.00 23.18 ATOM 212 CE2 TYR B 482 -25.477 18.434 -34.120 1.00 24.94 ATOM 213 CZ TYR B 482 -26.431 18.287 -33.135 1.00 23.95 ATOM 214 OH TYR B 482 -27.484 19.160 -33.056 1.00 23.86 ATOM 215 N ASN B 483 -24.259 14.618 -36.064 1.00 28.92 ATOM 216 CA ASN B 483 -25.153 14.834 -37.217 1.00 31.73 ATOM 217 C ASN B 483 -25.944 13.589 -37.619 1.00 35.71 ATOM 218 O ASN B 483 -27.096 13.701 -38.022 1.00 36.58 ATOM 219 CB ASN B 483 -24.372 15.356 -38.414 1.00 31.80 ATOM 220 CG ASN B 483 -23.956 16.803 -38.252 1.00 31.98 ATOM 221 OD1 ASN B 483 -24.554 17.550 -37.488 1.00 35.48 ATOM 222 ND2 ASN B 483 -22.950 17.218 -39.007 1.00 33.54 ATOM 223 N LYS B 484 -25.351 12.408 -37.503 1.00 40.62 ATOM 224 CA LYS B 484 -26.087 11.170 -37.776 1.00 47.33 ATOM 225 C LYS B 484 -27.219 10.948 -36.787 1.00 51.27 ATOM 226 O LYS B 484 -28.358 10.697 -37.174 1.00 55.81 ATOM 227 CB LYS B 484 -25.176 9.944 -37.727 1.00 48.76 ATOM 228 CG LYS B 484 -24.845 9.376 -39.090 1.00 50.41 ATOM 229 CD LYS B 484 -23.388 9.605 -39.460 1.00 53.57 ATOM 230 CE LYS B 484 -23.184 9.617 -40.964 1.00 54.56 ATOM 231 NZ LYS B 484 -22.288 8.512 -41.415 1.00 56.70 ATOM 232 N HIS B 485 -26.909 11.024 -35.503 1.00 55.13 ATOM 233 CA HIS B 485 -27.911 10.734 -34.497 1.00 58.57 ATOM 234 C HIS B 485 -28.885 11.888 -34.374 1.00 59.08 ATOM 235 O HIS B 485 -29.842 11.824 -33.604 1.00 61.97 ATOM 236 CB HIS B 485 -27.266 10.480 -33.151 1.00 61.12 ATOM 237 CG HIS B 485 -28.138 9.710 -32.213 1.00 65.39 ATOM 238 ND1 HIS B 485 -29.040 10.317 -31.367 1.00 68.81 ATOM 239 CD2 HIS B 485 -28.255 8.379 -31.995 1.00 68.74 ATOM 240 CE1 HIS B 485 -29.666 9.395 -30.659 1.00 69.51 ATOM 241 NE2 HIS B 485 -29.208 8.210 -31.022 1.00 69.76 ATOM 242 N ASN B 486 -28.635 12.942 -35.143 1.00 58.38 ATOM 243 CA ASN B 486 -29.468 14.128 -35.112 1.00 59.52 ATOM 244 C ASN B 486 -30.654 14.046 -36.075 1.00 61.41 ATOM 245 O ASN B 486 -30.478 13.882 -37.286 1.00 63.19 ATOM 246 CB ASN B 486 -28.624 15.351 -35.437 1.00 57.23 ATOM 247 CG ASN B 486 -29.356 16.629 -35.167 1.00 60.47 ATOM 248 OD1 ASN B 486 -30.176 16.690 -34.256 1.00 62.95 ATOM 249 ND2 ASN B 486 -29.071 17.663 -35.948 1.00 62.76 TER