HEADER OXIDOREDUCTASE 13-FEB-15 4Y6P TITLE Structure of Plasmodium falciparum DXR in complex with a TITLE 2 beta-substituted fosmidomycin analogue, RC177, and manganese COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.267; COMPND 5 ENGINEERED: YES; COMPND 6 mature protein lacks signal and apicoplast-targeting sequences; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.90 ANGSTORMS DBREF 4Y6P A 75 488 UNP Q8IKG4 DXR_PLAF7 75 488 SEQRES 1 A 30 SER GLU ASN SER GLU ASP LEU MET LYS GLN ILE LEU GLN SEQRES 2 A 30 ILE HIS SER TRP ALA LYS ASP LYS ALA THR ASP ILE TYR SEQRES 3 A 30 ASN LYS HIS ASN ATOM 1 N SER A 457 24.693 34.052 30.258 1.00 22.40 ATOM 2 CA SER A 457 26.143 33.856 30.130 1.00 24.25 ATOM 3 C SER A 457 26.610 33.821 28.675 1.00 25.55 ATOM 4 O SER A 457 25.967 33.217 27.814 1.00 24.27 ATOM 5 CB SER A 457 26.582 32.548 30.795 1.00 24.58 ATOM 6 OG SER A 457 26.092 32.446 32.119 1.00 24.71 ATOM 7 N GLU A 458 27.754 34.445 28.420 1.00 28.49 ATOM 8 CA GLU A 458 28.360 34.433 27.094 1.00 31.44 ATOM 9 C GLU A 458 29.083 33.134 26.875 1.00 30.66 ATOM 10 O GLU A 458 29.158 32.627 25.759 1.00 31.30 ATOM 11 CB GLU A 458 29.375 35.554 26.973 1.00 34.60 ATOM 12 CG GLU A 458 28.780 36.911 27.244 1.00 38.83 ATOM 13 CD GLU A 458 28.111 37.477 26.015 1.00 42.94 ATOM 14 OE1 GLU A 458 27.874 36.709 25.061 1.00 47.52 ATOM 15 OE2 GLU A 458 27.826 38.695 26.015 1.00 47.56 ATOM 16 N ASN A 459 29.650 32.624 27.958 1.00 29.24 ATOM 17 CA ASN A 459 30.450 31.433 27.908 1.00 29.50 ATOM 18 C ASN A 459 29.569 30.186 27.933 1.00 27.04 ATOM 19 O ASN A 459 28.687 30.067 28.785 1.00 24.28 ATOM 20 CB ASN A 459 31.409 31.419 29.089 1.00 30.91 ATOM 21 CG ASN A 459 32.170 30.128 29.179 1.00 34.15 ATOM 22 OD1 ASN A 459 31.803 29.224 29.930 1.00 34.37 ATOM 23 ND2 ASN A 459 33.212 30.008 28.362 1.00 36.46 ATOM 24 N SER A 460 29.821 29.257 27.012 1.00 25.18 ATOM 25 CA SER A 460 28.937 28.095 26.832 1.00 24.75 ATOM 26 C SER A 460 28.889 27.193 28.078 1.00 22.07 ATOM 27 O SER A 460 27.853 26.616 28.397 1.00 19.51 ATOM 28 CB SER A 460 29.345 27.285 25.591 1.00 26.12 ATOM 29 OG SER A 460 30.360 26.353 25.892 1.00 29.09 ATOM 30 N GLU A 461 30.013 27.081 28.778 1.00 20.39 ATOM 31 CA GLU A 461 30.085 26.274 29.988 1.00 20.23 ATOM 32 C GLU A 461 29.314 26.917 31.134 1.00 19.69 ATOM 33 O GLU A 461 28.595 26.230 31.865 1.00 19.83 ATOM 34 CB GLU A 461 31.541 26.072 30.379 1.00 20.62 ATOM 35 CG GLU A 461 32.134 24.814 29.806 1.00 21.11 ATOM 36 CD GLU A 461 33.621 24.702 30.087 1.00 21.66 ATOM 37 OE1 GLU A 461 34.374 24.278 29.190 1.00 21.76 ATOM 38 OE2 GLU A 461 34.021 25.036 31.221 1.00 20.71 ATOM 39 N ASP A 462 29.462 28.231 31.286 1.00 19.13 ATOM 40 CA ASP A 462 28.679 28.974 32.266 1.00 20.02 ATOM 41 C ASP A 462 27.189 28.901 31.937 1.00 18.48 ATOM 42 O ASP A 462 26.363 28.738 32.834 1.00 17.58 ATOM 43 CB ASP A 462 29.115 30.441 32.329 1.00 21.78 ATOM 44 CG ASP A 462 30.520 30.607 32.883 1.00 24.07 ATOM 45 OD1 ASP A 462 30.970 29.719 33.636 1.00 25.47 ATOM 46 OD2 ASP A 462 31.179 31.610 32.539 1.00 26.38 ATOM 47 N LEU A 463 26.852 29.030 30.655 1.00 18.01 ATOM 48 CA LEU A 463 25.445 28.991 30.205 1.00 16.76 ATOM 49 C LEU A 463 24.771 27.669 30.572 1.00 17.36 ATOM 50 O LEU A 463 23.669 27.644 31.131 1.00 15.99 ATOM 51 CB LEU A 463 25.376 29.207 28.690 1.00 17.13 ATOM 52 CG LEU A 463 23.995 29.273 28.030 1.00 16.84 ATOM 53 CD1 LEU A 463 23.087 30.244 28.766 1.00 16.74 ATOM 54 CD2 LEU A 463 24.116 29.660 26.564 1.00 17.31 ATOM 55 N MET A 464 25.433 26.566 30.241 1.00 18.14 ATOM 56 CA MET A 464 24.941 25.260 30.620 1.00 20.06 ATOM 57 C MET A 464 24.715 25.146 32.140 1.00 19.11 ATOM 58 O MET A 464 23.714 24.598 32.591 1.00 17.07 ATOM 59 CB MET A 464 25.914 24.189 30.124 1.00 23.63 ATOM 60 CG MET A 464 25.637 22.827 30.708 1.00 27.72 ATOM 61 SD MET A 464 26.007 21.459 29.612 1.00 36.89 ATOM 62 CE MET A 464 25.876 20.206 30.816 1.00 37.50 ATOM 63 N LYS A 465 25.639 25.669 32.941 1.00 18.66 ATOM 64 CA LYS A 465 25.478 25.594 34.388 1.00 18.49 ATOM 65 C LYS A 465 24.319 26.479 34.857 1.00 16.63 ATOM 66 O LYS A 465 23.574 26.119 35.769 1.00 15.91 ATOM 67 CB LYS A 465 26.803 25.908 35.102 1.00 20.76 ATOM 68 CG LYS A 465 27.777 24.744 34.933 1.00 22.86 ATOM 69 CD LYS A 465 29.105 24.856 35.665 1.00 25.78 ATOM 70 CE LYS A 465 29.612 26.243 35.842 1.00 26.71 ATOM 71 NZ LYS A 465 30.925 26.172 36.546 1.00 29.10 ATOM 72 N GLN A 466 24.144 27.613 34.194 1.00 14.92 ATOM 73 CA GLN A 466 23.041 28.501 34.470 1.00 14.90 ATOM 74 C GLN A 466 21.705 27.771 34.232 1.00 13.52 ATOM 75 O GLN A 466 20.799 27.792 35.075 1.00 12.68 ATOM 76 CB GLN A 466 23.209 29.724 33.569 1.00 16.48 ATOM 77 CG GLN A 466 22.239 30.846 33.787 1.00 17.21 ATOM 78 CD GLN A 466 22.711 32.135 33.143 1.00 18.18 ATOM 79 OE1 GLN A 466 23.487 32.135 32.169 1.00 18.79 ATOM 80 NE2 GLN A 466 22.233 33.250 33.677 1.00 18.86 ATOM 81 N ILE A 467 21.610 27.069 33.104 1.00 13.38 ATOM 82 CA ILE A 467 20.393 26.324 32.767 1.00 13.58 ATOM 83 C ILE A 467 20.091 25.257 33.824 1.00 13.44 ATOM 84 O ILE A 467 18.970 25.147 34.326 1.00 12.71 ATOM 85 CB ILE A 467 20.496 25.723 31.354 1.00 13.74 ATOM 86 CG1 ILE A 467 20.430 26.850 30.316 1.00 14.19 ATOM 87 CG2 ILE A 467 19.382 24.717 31.109 1.00 13.99 ATOM 88 CD1 ILE A 467 21.019 26.467 28.976 1.00 14.34 ATOM 89 N LEU A 468 21.112 24.497 34.190 1.00 14.35 ATOM 90 CA LEU A 468 20.959 23.473 35.200 1.00 15.55 ATOM 91 C LEU A 468 20.526 24.077 36.527 1.00 15.60 ATOM 92 O LEU A 468 19.671 23.524 37.208 1.00 15.14 ATOM 93 CB LEU A 468 22.258 22.696 35.351 1.00 17.01 ATOM 94 CG LEU A 468 22.580 21.874 34.099 1.00 18.59 ATOM 95 CD1 LEU A 468 24.007 21.341 34.137 1.00 20.45 ATOM 96 CD2 LEU A 468 21.587 20.753 33.931 1.00 19.80 ATOM 97 N GLN A 469 21.107 25.216 36.892 1.00 16.05 ATOM 98 CA GLN A 469 20.794 25.820 38.186 1.00 17.73 ATOM 99 C GLN A 469 19.346 26.289 38.203 1.00 16.27 ATOM 100 O GLN A 469 18.626 26.068 39.171 1.00 14.95 ATOM 101 CB GLN A 469 21.730 26.998 38.502 1.00 20.22 ATOM 102 CG GLN A 469 21.493 27.592 39.882 1.00 22.59 ATOM 103 CD GLN A 469 20.642 28.845 39.918 1.00 25.62 ATOM 104 OE1 GLN A 469 19.933 29.061 40.887 1.00 30.25 ATOM 105 NE2 GLN A 469 20.764 29.708 38.925 1.00 27.00 ATOM 106 N ILE A 470 18.927 26.922 37.110 1.00 15.52 ATOM 107 CA ILE A 470 17.571 27.433 36.999 1.00 15.08 ATOM 108 C ILE A 470 16.568 26.286 37.012 1.00 15.15 ATOM 109 O ILE A 470 15.541 26.364 37.692 1.00 15.52 ATOM 110 CB ILE A 470 17.424 28.352 35.765 1.00 15.27 ATOM 111 CG1 ILE A 470 18.247 29.625 36.003 1.00 15.60 ATOM 112 CG2 ILE A 470 15.968 28.729 35.535 1.00 15.17 ATOM 113 CD1 ILE A 470 18.515 30.460 34.777 1.00 15.88 ATOM 114 N HIS A 471 16.884 25.211 36.288 1.00 14.84 ATOM 115 CA HIS A 471 16.046 24.013 36.230 1.00 14.58 ATOM 116 C HIS A 471 15.851 23.429 37.626 1.00 14.77 ATOM 117 O HIS A 471 14.730 23.128 38.044 1.00 14.35 ATOM 118 CB HIS A 471 16.700 22.987 35.284 1.00 15.15 ATOM 119 CG HIS A 471 16.052 21.637 35.292 1.00 15.47 ATOM 120 ND1 HIS A 471 14.991 21.315 34.475 1.00 15.66 ATOM 121 CD2 HIS A 471 16.337 20.515 36.000 1.00 16.38 ATOM 122 CE1 HIS A 471 14.631 20.062 34.695 1.00 16.37 ATOM 123 NE2 HIS A 471 15.442 19.549 35.604 1.00 16.68 ATOM 124 N SER A 472 16.955 23.270 38.343 1.00 14.82 ATOM 125 CA SER A 472 16.928 22.749 39.698 0.50 15.45 ATOM 126 C SER A 472 16.155 23.669 40.641 1.00 15.15 ATOM 127 O SER A 472 15.358 23.208 41.463 1.00 15.54 ATOM 128 CB SER A 472 18.360 22.548 40.192 0.50 16.00 ATOM 129 OG SER A 472 18.812 21.267 39.839 0.50 16.44 ATOM 130 N TRP A 473 16.370 24.971 40.515 1.00 15.06 ATOM 131 CA TRP A 473 15.651 25.929 41.362 1.00 15.09 ATOM 132 C TRP A 473 14.130 25.825 41.118 1.00 15.29 ATOM 133 O TRP A 473 13.332 25.777 42.066 1.00 14.40 ATOM 134 CB TRP A 473 16.116 27.366 41.121 1.00 15.28 ATOM 135 CG TRP A 473 15.115 28.354 41.676 1.00 16.00 ATOM 136 CD1 TRP A 473 15.049 28.821 42.959 1.00 16.74 ATOM 137 CD2 TRP A 473 14.012 28.946 40.977 1.00 16.49 ATOM 138 NE1 TRP A 473 13.983 29.680 43.097 1.00 16.92 ATOM 139 CE2 TRP A 473 13.327 29.769 41.895 1.00 17.17 ATOM 140 CE3 TRP A 473 13.530 28.851 39.666 1.00 16.60 ATOM 141 CZ2 TRP A 473 12.186 30.492 41.539 1.00 17.46 ATOM 142 CZ3 TRP A 473 12.404 29.569 39.311 1.00 16.84 ATOM 143 CH2 TRP A 473 11.742 30.381 40.246 1.00 17.42 ATOM 144 N ALA A 474 13.745 25.777 39.835 1.00 14.94 ATOM 145 CA ALA A 474 12.334 25.712 39.448 1.00 14.60 ATOM 146 C ALA A 474 11.651 24.438 39.943 1.00 14.87 ATOM 147 O ALA A 474 10.477 24.470 40.336 1.00 15.00 ATOM 148 CB ALA A 474 12.196 25.840 37.935 1.00 14.46 ATOM 149 N LYS A 475 12.357 23.313 39.923 1.00 15.32 ATOM 150 CA LYS A 475 11.778 22.076 40.447 1.00 16.78 ATOM 151 C LYS A 475 11.561 22.204 41.956 1.00 16.99 ATOM 152 O LYS A 475 10.560 21.736 42.496 1.00 16.65 ATOM 153 CB LYS A 475 12.670 20.863 40.129 1.00 18.13 ATOM 154 CG LYS A 475 12.602 20.469 38.663 1.00 19.45 ATOM 155 CD LYS A 475 13.583 19.383 38.258 1.00 22.03 ATOM 156 CE LYS A 475 13.822 18.351 39.336 1.00 24.55 ATOM 157 NZ LYS A 475 15.076 17.567 39.089 1.00 26.54 ATOM 158 N ASP A 476 12.523 22.818 42.629 1.00 17.60 ATOM 159 CA ASP A 476 12.440 23.001 44.076 1.00 19.10 ATOM 160 C ASP A 476 11.316 23.959 44.430 1.00 18.04 ATOM 161 O ASP A 476 10.563 23.723 45.372 1.00 19.06 ATOM 162 CB ASP A 476 13.764 23.539 44.628 1.00 20.20 ATOM 163 CG ASP A 476 14.835 22.490 44.691 1.00 21.61 ATOM 164 OD1 ASP A 476 14.530 21.286 44.516 1.00 23.05 ATOM 165 OD2 ASP A 476 15.998 22.878 44.916 1.00 24.16 ATOM 166 N LYS A 477 11.197 25.038 43.663 1.00 17.33 ATOM 167 CA LYS A 477 10.125 26.002 43.899 1.00 17.25 ATOM 168 C LYS A 477 8.744 25.345 43.742 1.00 16.93 ATOM 169 O LYS A 477 7.850 25.537 44.579 1.00 16.35 ATOM 170 CB LYS A 477 10.286 27.216 42.979 1.00 17.17 ATOM 171 CG LYS A 477 9.303 28.355 43.232 1.00 17.80 ATOM 172 CD LYS A 477 9.524 29.025 44.585 1.00 17.78 ATOM 173 CE LYS A 477 8.556 30.179 44.779 1.00 18.41 ATOM 174 NZ LYS A 477 8.902 31.023 45.954 1.00 18.74 ATOM 175 N ALA A 478 8.575 24.547 42.688 1.00 16.50 ATOM 176 CA ALA A 478 7.317 23.848 42.442 1.00 16.44 ATOM 177 C ALA A 478 7.007 22.906 43.607 1.00 17.16 ATOM 178 O ALA A 478 5.876 22.823 44.068 1.00 16.75 ATOM 179 CB ALA A 478 7.382 23.058 41.123 1.00 16.37 ATOM 180 N THR A 479 8.025 22.184 44.064 1.00 18.69 ATOM 181 CA THR A 479 7.883 21.241 45.167 1.00 20.00 ATOM 182 C THR A 479 7.507 21.942 46.479 1.00 21.51 ATOM 183 O THR A 479 6.668 21.447 47.247 1.00 21.39 ATOM 184 CB THR A 479 9.187 20.458 45.362 1.00 20.66 ATOM 185 OG1 THR A 479 9.472 19.730 44.174 1.00 20.86 ATOM 186 CG2 THR A 479 9.086 19.465 46.531 1.00 21.70 ATOM 187 N ASP A 480 8.129 23.091 46.735 1.00 22.45 ATOM 188 CA ASP A 480 7.843 23.857 47.946 1.00 24.00 ATOM 189 C ASP A 480 6.424 24.427 47.917 1.00 23.79 ATOM 190 O ASP A 480 5.751 24.497 48.939 1.00 24.37 ATOM 191 CB ASP A 480 8.874 24.972 48.134 1.00 26.02 ATOM 192 CG ASP A 480 10.250 24.431 48.481 1.00 27.26 ATOM 193 OD1 ASP A 480 10.355 23.265 48.923 1.00 29.47 ATOM 194 OD2 ASP A 480 11.236 25.166 48.301 1.00 30.73 ATOM 195 N ILE A 481 5.962 24.824 46.742 1.00 22.79 ATOM 196 CA ILE A 481 4.585 25.263 46.607 1.00 22.63 ATOM 197 C ILE A 481 3.641 24.104 46.939 1.00 22.45 ATOM 198 O ILE A 481 2.686 24.262 47.704 1.00 23.56 ATOM 199 CB ILE A 481 4.316 25.822 45.201 1.00 22.45 ATOM 200 CG1 ILE A 481 5.002 27.184 45.047 1.00 22.37 ATOM 201 CG2 ILE A 481 2.822 25.937 44.945 1.00 22.50 ATOM 202 CD1 ILE A 481 5.300 27.555 43.608 1.00 22.50 ATOM 203 N TYR A 482 3.925 22.926 46.406 1.00 21.86 ATOM 204 CA TYR A 482 3.086 21.774 46.681 1.00 22.96 ATOM 205 C TYR A 482 3.062 21.488 48.184 1.00 24.33 ATOM 206 O TYR A 482 1.999 21.273 48.768 1.00 23.19 ATOM 207 CB TYR A 482 3.596 20.533 45.957 1.00 22.43 ATOM 208 CG TYR A 482 2.979 19.271 46.494 1.00 22.54 ATOM 209 CD1 TYR A 482 1.635 18.995 46.292 1.00 22.63 ATOM 210 CD2 TYR A 482 3.735 18.356 47.213 1.00 22.87 ATOM 211 CE1 TYR A 482 1.062 17.844 46.786 1.00 23.37 ATOM 212 CE2 TYR A 482 3.173 17.201 47.718 1.00 23.54 ATOM 213 CZ TYR A 482 1.831 16.950 47.503 1.00 23.89 ATOM 214 OH TYR A 482 1.251 15.801 47.984 1.00 24.04 ATOM 215 N ASN A 483 4.250 21.458 48.783 1.00 25.00 ATOM 216 CA ASN A 483 4.398 21.176 50.223 1.00 28.16 ATOM 217 C ASN A 483 3.678 22.175 51.128 1.00 30.22 ATOM 218 O ASN A 483 3.051 21.776 52.103 1.00 30.64 ATOM 219 CB ASN A 483 5.880 21.037 50.589 1.00 27.33 ATOM 220 CG ASN A 483 6.444 19.721 50.121 1.00 27.12 ATOM 221 OD1 ASN A 483 5.690 18.779 49.900 1.00 27.44 ATOM 222 ND2 ASN A 483 7.763 19.641 49.957 1.00 27.75 ATOM 223 N LYS A 484 3.745 23.458 50.791 1.00 32.83 ATOM 224 CA LYS A 484 2.981 24.480 51.510 1.00 37.93 ATOM 225 C LYS A 484 1.522 24.093 51.506 1.00 39.56 ATOM 226 O LYS A 484 0.851 24.078 52.536 1.00 39.86 ATOM 227 CB LYS A 484 3.076 25.838 50.805 1.00 40.17 ATOM 228 CG LYS A 484 3.621 26.986 51.633 1.00 43.78 ATOM 229 CD LYS A 484 5.101 27.120 51.537 1.00 46.43 ATOM 230 CE LYS A 484 5.725 26.167 52.504 1.00 47.35 ATOM 231 NZ LYS A 484 6.658 25.334 51.781 1.00 47.60 ATOM 232 N HIS A 485 1.044 23.800 50.306 1.00 41.31 ATOM 233 CA HIS A 485 -0.367 23.620 50.046 1.00 45.04 ATOM 234 C HIS A 485 -0.887 22.339 50.673 1.00 44.89 ATOM 235 O HIS A 485 -2.089 22.148 50.812 1.00 44.88 ATOM 236 CB HIS A 485 -0.595 23.594 48.531 1.00 48.20 ATOM 237 CG HIS A 485 -2.035 23.642 48.134 1.00 52.95 ATOM 238 ND1 HIS A 485 -2.613 22.719 47.285 1.00 55.32 ATOM 239 CD2 HIS A 485 -3.019 24.505 48.481 1.00 54.72 ATOM 240 CE1 HIS A 485 -3.892 23.017 47.123 1.00 56.05 ATOM 241 NE2 HIS A 485 -4.162 24.096 47.840 1.00 56.10 ATOM 242 N ASN A 486 0.018 21.453 51.051 1.00 45.55 ATOM 243 CA ASN A 486 -0.402 20.142 51.482 1.00 48.62 ATOM 244 C ASN A 486 -0.191 19.862 52.960 1.00 49.04 ATOM 245 O ASN A 486 0.946 19.979 53.442 1.00 49.48 ATOM 246 CB ASN A 486 0.304 19.095 50.668 1.00 50.40 ATOM 247 CG ASN A 486 0.342 17.777 51.372 1.00 52.61 ATOM 248 OD1 ASN A 486 -0.592 16.991 51.306 1.00 54.39 ATOM 249 ND2 ASN A 486 1.374 17.620 52.195 1.00 53.26 TER