HEADER Hydrolase/Hydrolase Inhibitor 22-APR-15 4ZGA TITLE Structural basis for inhibition of human autotaxin by four novel TITLE 2 compounds COMPND MOL_ID: 1; COMPND 2 MOLECULE: Ectonucleotide pyrophosphatase/phosphodiesterase family COMPND 3 member 2; COMPND 4 CHAIN: A; COMPND 5 EC: 3.1.4.39; COMPND 6 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.60 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 110 REMARK 465 VAL A 111 REMARK 465 ARG A 112 REMARK 465 SER A 121 DBREF 4ZGA A 1 863 UNP Q13822 ENPP2_HUMAN 1 863 SEQRES 1 A 42 THR ALA ARG GLY TRP GLU CYS THR LYS ASP ARG CYS GLY SEQRES 2 A 42 GLU VAL ARG ASN GLU GLU ASN ALA CYS HIS CYS SER GLU SEQRES 3 A 42 ASP CYS LEU ALA ARG GLY ASP CYS CYS THR ASN TYR GLN SEQRES 4 A 42 VAL VAL CYS ATOM 1 N THR A 97 13.165 85.873 16.226 1.00 97.76 ATOM 2 CA THR A 97 11.740 86.270 16.372 1.00 94.61 ATOM 3 C THR A 97 11.282 87.554 15.663 1.00 93.48 ATOM 4 O THR A 97 10.081 87.877 15.664 1.00 78.21 ATOM 5 CB THR A 97 11.413 86.499 17.861 1.00 98.94 ATOM 6 OG1 THR A 97 12.636 86.691 18.598 1.00 95.35 ATOM 7 CG2 THR A 97 10.630 85.327 18.425 1.00 97.89 ATOM 8 N ALA A 98 12.229 88.287 15.078 1.00101.98 ATOM 9 CA ALA A 98 11.956 89.616 14.518 1.00 98.26 ATOM 10 C ALA A 98 10.845 89.580 13.467 1.00 87.53 ATOM 11 O ALA A 98 10.806 88.682 12.631 1.00 91.85 ATOM 12 CB ALA A 98 13.230 90.215 13.943 1.00101.76 ATOM 13 N ARG A 99 9.928 90.541 13.560 1.00 83.76 ATOM 14 CA ARG A 99 8.717 90.620 12.718 1.00 82.71 ATOM 15 C ARG A 99 7.705 89.475 12.880 1.00 83.99 ATOM 16 O ARG A 99 6.667 89.488 12.210 1.00 83.02 ATOM 17 CB ARG A 99 9.072 90.804 11.239 1.00 84.45 ATOM 18 N GLY A 100 7.968 88.515 13.772 1.00 80.46 ATOM 19 CA GLY A 100 6.933 87.548 14.146 1.00 85.88 ATOM 20 C GLY A 100 6.723 86.432 13.132 1.00 89.56 ATOM 21 O GLY A 100 7.686 85.975 12.531 1.00114.71 ATOM 22 N TRP A 101 5.472 86.009 12.935 1.00 81.61 ATOM 23 CA TRP A 101 5.148 84.793 12.174 1.00 82.09 ATOM 24 C TRP A 101 3.936 84.909 11.218 1.00 83.21 ATOM 25 O TRP A 101 3.318 83.895 10.885 1.00 79.68 ATOM 26 CB TRP A 101 4.877 83.607 13.141 1.00 84.67 ATOM 27 CG TRP A 101 5.748 83.553 14.387 1.00 80.42 ATOM 28 CD1 TRP A 101 5.508 84.182 15.576 1.00 79.62 ATOM 29 CD2 TRP A 101 6.964 82.810 14.567 1.00 74.58 ATOM 30 NE1 TRP A 101 6.507 83.893 16.476 1.00 79.37 ATOM 31 CE2 TRP A 101 7.417 83.061 15.882 1.00 73.79 ATOM 32 CE3 TRP A 101 7.712 81.964 13.748 1.00 74.00 ATOM 33 CZ2 TRP A 101 8.588 82.504 16.396 1.00 72.44 ATOM 34 CZ3 TRP A 101 8.898 81.416 14.260 1.00 79.01 ATOM 35 CH2 TRP A 101 9.318 81.689 15.574 1.00 72.11 ATOM 36 N GLU A 102 3.587 86.113 10.769 1.00 88.10 ATOM 37 CA GLU A 102 2.426 86.285 9.868 1.00 88.97 ATOM 38 C GLU A 102 2.683 87.375 8.801 1.00 88.42 ATOM 39 O GLU A 102 2.733 88.555 9.122 1.00 94.34 ATOM 40 CB GLU A 102 1.167 86.593 10.705 1.00 79.18 ATOM 41 N CYS A 103 2.876 86.983 7.542 1.00 90.94 ATOM 42 CA CYS A 103 3.061 87.961 6.449 1.00 95.60 ATOM 43 C CYS A 103 1.903 88.971 6.352 1.00100.37 ATOM 44 O CYS A 103 0.754 88.669 6.683 1.00 92.37 ATOM 45 CB CYS A 103 3.180 87.294 5.059 1.00 93.00 ATOM 46 SG CYS A 103 4.602 86.245 4.656 1.00 85.66 ATOM 47 N THR A 104 2.239 90.168 5.874 1.00109.39 ATOM 48 CA THR A 104 1.275 91.211 5.510 1.00104.01 ATOM 49 C THR A 104 1.806 91.931 4.265 1.00106.62 ATOM 50 O THR A 104 3.011 91.812 3.944 1.00 92.56 ATOM 51 CB THR A 104 1.117 92.228 6.642 1.00 99.36 ATOM 52 OG1 THR A 104 2.408 92.754 6.972 1.00 93.55 ATOM 53 CG2 THR A 104 0.501 91.565 7.877 1.00 97.71 ATOM 54 N LYS A 105 0.924 92.672 3.578 1.00105.10 ATOM 55 CA LYS A 105 1.278 93.356 2.317 1.00 96.30 ATOM 56 C LYS A 105 2.650 94.023 2.424 1.00100.55 ATOM 57 O LYS A 105 3.573 93.659 1.690 1.00104.85 ATOM 58 CB LYS A 105 0.215 94.376 1.935 1.00 86.80 ATOM 59 N ASP A 106 2.788 94.944 3.382 1.00 99.35 ATOM 60 CA ASP A 106 4.051 95.658 3.668 1.00101.90 ATOM 61 C ASP A 106 5.375 94.911 3.365 1.00110.26 ATOM 62 O ASP A 106 6.362 95.542 2.975 1.00107.93 ATOM 63 CB ASP A 106 4.058 96.118 5.136 1.00 97.45 ATOM 64 N ARG A 107 5.408 93.587 3.547 1.00117.79 ATOM 65 CA ARG A 107 6.654 92.820 3.374 1.00114.31 ATOM 66 C ARG A 107 6.649 91.757 2.253 1.00114.42 ATOM 67 O ARG A 107 7.622 90.975 2.144 1.00107.58 ATOM 68 CB ARG A 107 7.029 92.162 4.703 1.00114.96 ATOM 69 CG ARG A 107 8.511 91.822 4.849 1.00114.80 ATOM 70 CD ARG A 107 8.943 91.801 6.314 1.00114.13 ATOM 71 NE ARG A 107 8.983 90.453 6.903 1.00115.18 ATOM 72 CZ ARG A 107 7.942 89.787 7.415 1.00 96.45 ATOM 73 NH1 ARG A 107 6.716 90.299 7.412 1.00 89.23 ATOM 74 NH2 ARG A 107 8.133 88.585 7.927 1.00 88.25 ATOM 75 N CYS A 108 5.604 91.744 1.411 1.00105.34 ATOM 76 CA CYS A 108 5.499 90.772 0.296 1.00 98.27 ATOM 77 C CYS A 108 6.575 90.930 -0.788 1.00 93.75 ATOM 78 O CYS A 108 6.299 90.670 -1.951 1.00 89.73 ATOM 79 CB CYS A 108 4.127 90.841 -0.394 1.00 99.40 ATOM 80 SG CYS A 108 2.734 89.998 0.402 1.00122.08 ATOM 81 N GLY A 109 7.788 91.338 -0.417 1.00 90.43 ATOM 82 CA GLY A 109 8.909 91.395 -1.348 1.00 84.79 ATOM 83 C GLY A 109 10.111 90.644 -0.809 1.00 78.20 ATOM 84 O GLY A 109 11.109 90.484 -1.507 1.00 61.38 ATOM 85 N ASN A 113 16.152 88.590 3.110 1.00 97.76 ATOM 86 CA ASN A 113 16.794 88.874 4.399 1.00100.73 ATOM 87 C ASN A 113 17.228 87.581 5.115 1.00 98.87 ATOM 88 O ASN A 113 17.505 86.570 4.457 1.00103.11 ATOM 89 CB ASN A 113 15.843 89.705 5.276 1.00103.98 ATOM 90 CG ASN A 113 16.561 90.723 6.172 1.00103.33 ATOM 91 OD1 ASN A 113 16.030 91.806 6.408 1.00102.54 ATOM 92 ND2 ASN A 113 17.738 90.379 6.690 1.00 96.39 ATOM 93 N GLU A 114 17.273 87.608 6.448 1.00 97.27 ATOM 94 CA GLU A 114 17.866 86.523 7.242 1.00 99.93 ATOM 95 C GLU A 114 17.830 86.743 8.760 1.00108.24 ATOM 96 O GLU A 114 18.170 85.826 9.511 1.00105.66 ATOM 97 CB GLU A 114 19.320 86.283 6.836 1.00 91.74 ATOM 98 N GLU A 115 17.468 87.949 9.211 1.00116.17 ATOM 99 CA GLU A 115 17.276 88.230 10.646 1.00111.86 ATOM 100 C GLU A 115 15.805 88.021 11.051 1.00110.70 ATOM 101 O GLU A 115 15.475 88.003 12.245 1.00104.57 ATOM 102 CB GLU A 115 17.748 89.651 11.001 1.00 99.87 ATOM 103 N ASN A 116 14.933 87.843 10.056 1.00108.18 ATOM 104 CA ASN A 116 13.515 87.552 10.299 1.00112.91 ATOM 105 C ASN A 116 13.290 86.108 10.804 1.00115.59 ATOM 106 O ASN A 116 14.236 85.313 10.876 1.00109.94 ATOM 107 CB ASN A 116 12.699 87.798 9.027 1.00108.27 ATOM 108 CG ASN A 116 12.871 89.207 8.481 1.00105.88 ATOM 109 OD1 ASN A 116 12.637 90.197 9.176 1.00 95.78 ATOM 110 ND2 ASN A 116 13.266 89.301 7.221 1.00108.18 ATOM 111 N ALA A 117 12.044 85.779 11.162 1.00105.05 ATOM 112 CA ALA A 117 11.713 84.457 11.702 1.00 92.19 ATOM 113 C ALA A 117 11.169 83.583 10.590 1.00 81.25 ATOM 114 O ALA A 117 11.500 82.418 10.479 1.00 72.84 ATOM 115 CB ALA A 117 10.704 84.584 12.833 1.00 93.61 ATOM 116 N CYS A 118 10.317 84.163 9.769 1.00 83.95 ATOM 117 CA CYS A 118 9.895 83.526 8.538 1.00 86.98 ATOM 118 C CYS A 118 9.785 84.605 7.469 1.00 96.24 ATOM 119 O CYS A 118 9.580 85.777 7.779 1.00107.92 ATOM 120 CB CYS A 118 8.563 82.835 8.735 1.00 81.63 ATOM 121 SG CYS A 118 7.337 83.940 9.438 1.00 77.11 ATOM 122 N HIS A 119 9.888 84.196 6.208 1.00 99.27 ATOM 123 CA HIS A 119 10.189 85.107 5.111 1.00 81.90 ATOM 124 C HIS A 119 9.003 85.240 4.161 1.00 88.04 ATOM 125 O HIS A 119 8.111 84.409 4.178 1.00 85.57 ATOM 126 CB HIS A 119 11.443 84.589 4.436 1.00 78.02 ATOM 127 CG HIS A 119 12.578 84.360 5.394 1.00 77.05 ATOM 128 ND1 HIS A 119 13.435 85.364 5.786 1.00 81.92 ATOM 129 CD2 HIS A 119 12.974 83.254 6.070 1.00 84.19 ATOM 130 CE1 HIS A 119 14.321 84.885 6.645 1.00 79.77 ATOM 131 NE2 HIS A 119 14.068 83.604 6.831 1.00 78.72 ATOM 132 N CYS A 120 8.968 86.316 3.375 1.00104.62 ATOM 133 CA CYS A 120 7.805 86.651 2.522 1.00103.54 ATOM 134 C CYS A 120 8.196 87.205 1.123 1.00102.90 ATOM 135 O CYS A 120 9.137 86.735 0.453 1.00 91.14 ATOM 136 CB CYS A 120 6.894 87.675 3.231 1.00103.75 ATOM 137 SG CYS A 120 6.319 87.300 4.922 1.00108.25 ATOM 138 N GLU A 122 13.286 85.692 -2.174 1.00 91.87 ATOM 139 CA GLU A 122 12.107 84.883 -2.473 1.00 93.86 ATOM 140 C GLU A 122 12.427 83.403 -2.512 1.00 97.61 ATOM 141 O GLU A 122 11.670 82.618 -3.092 1.00 90.60 ATOM 142 CB GLU A 122 11.487 85.300 -3.805 1.00 96.27 ATOM 143 CG GLU A 122 10.118 84.668 -4.064 1.00 99.94 ATOM 144 CD GLU A 122 9.037 85.694 -4.355 1.00102.72 ATOM 145 OE1 GLU A 122 8.464 85.660 -5.471 1.00 96.19 ATOM 146 OE2 GLU A 122 8.765 86.527 -3.456 1.00 88.54 ATOM 147 N ASP A 123 13.534 83.013 -1.877 1.00107.57 ATOM 148 CA ASP A 123 13.863 81.591 -1.686 1.00107.04 ATOM 149 C ASP A 123 12.861 80.963 -0.724 1.00106.89 ATOM 150 O ASP A 123 13.199 80.056 0.042 1.00 97.65 ATOM 151 CB ASP A 123 15.312 81.402 -1.180 1.00109.63 ATOM 152 CG ASP A 123 15.578 82.050 0.189 1.00113.94 ATOM 153 OD1 ASP A 123 14.952 83.086 0.549 1.00110.67 ATOM 154 OD2 ASP A 123 16.454 81.509 0.898 1.00111.85 ATOM 155 N CYS A 124 11.615 81.427 -0.817 1.00101.21 ATOM 156 CA CYS A 124 10.641 81.275 0.240 1.00 94.59 ATOM 157 C CYS A 124 10.042 79.893 0.176 1.00 90.42 ATOM 158 O CYS A 124 10.464 79.028 0.935 1.00 71.16 ATOM 159 CB CYS A 124 9.563 82.349 0.117 1.00102.45 ATOM 160 SG CYS A 124 8.412 82.423 1.507 1.00100.23 ATOM 161 N LEU A 125 9.074 79.684 -0.728 1.00 93.14 ATOM 162 CA LEU A 125 8.487 78.366 -0.935 1.00 89.23 ATOM 163 C LEU A 125 9.655 77.439 -1.269 1.00 97.03 ATOM 164 O LEU A 125 9.817 76.382 -0.646 1.00 94.58 ATOM 165 CB LEU A 125 7.434 78.393 -2.046 1.00 75.42 ATOM 166 N ALA A 126 10.498 77.894 -2.203 1.00101.75 ATOM 167 CA ALA A 126 11.735 77.210 -2.582 1.00 97.46 ATOM 168 C ALA A 126 12.547 76.684 -1.373 1.00100.20 ATOM 169 O ALA A 126 12.570 75.470 -1.135 1.00 92.60 ATOM 170 CB ALA A 126 12.575 78.122 -3.463 1.00 91.07 ATOM 171 N ARG A 127 13.181 77.578 -0.606 1.00106.44 ATOM 172 CA ARG A 127 14.011 77.168 0.566 1.00115.51 ATOM 173 C ARG A 127 13.183 76.702 1.773 1.00108.48 ATOM 174 O ARG A 127 13.714 76.096 2.707 1.00101.63 ATOM 175 CB ARG A 127 14.982 78.282 0.998 1.00108.97 ATOM 176 N GLY A 128 11.888 77.003 1.749 1.00107.10 ATOM 177 CA GLY A 128 10.940 76.445 2.705 1.00113.30 ATOM 178 C GLY A 128 10.901 77.088 4.080 1.00109.15 ATOM 179 O GLY A 128 10.755 76.385 5.084 1.00113.76 ATOM 180 N ASP A 129 11.021 78.415 4.130 1.00101.02 ATOM 181 CA ASP A 129 10.813 79.174 5.381 1.00 94.84 ATOM 182 C ASP A 129 9.932 80.415 5.158 1.00 83.86 ATOM 183 O ASP A 129 10.166 81.481 5.708 1.00 84.43 ATOM 184 CB ASP A 129 12.144 79.524 6.059 1.00 92.56 ATOM 185 CG ASP A 129 13.185 80.025 5.087 1.00 95.54 ATOM 186 OD1 ASP A 129 12.823 80.490 3.978 1.00 97.97 ATOM 187 OD2 ASP A 129 14.376 79.953 5.442 1.00 94.09 ATOM 188 N CYS A 130 8.910 80.245 4.336 1.00 70.31 ATOM 189 CA CYS A 130 7.793 81.143 4.329 1.00 77.54 ATOM 190 C CYS A 130 7.091 81.201 5.674 1.00 82.53 ATOM 191 O CYS A 130 7.158 80.264 6.459 1.00 91.36 ATOM 192 CB CYS A 130 6.807 80.663 3.282 1.00 80.78 ATOM 193 SG CYS A 130 7.647 80.552 1.707 1.00 88.89 ATOM 194 N CYS A 131 6.414 82.310 5.946 1.00 79.52 ATOM 195 CA CYS A 131 5.471 82.330 7.036 1.00 78.08 ATOM 196 C CYS A 131 4.315 81.576 6.459 1.00 77.71 ATOM 197 O CYS A 131 4.158 81.542 5.243 1.00 78.70 ATOM 198 CB CYS A 131 5.070 83.746 7.418 1.00 74.25 ATOM 199 SG CYS A 131 6.503 84.761 7.807 1.00 79.93 ATOM 200 N THR A 132 3.515 80.960 7.317 1.00 75.63 ATOM 201 CA THR A 132 2.473 80.061 6.838 1.00 78.29 ATOM 202 C THR A 132 1.358 80.782 6.039 1.00 74.07 ATOM 203 O THR A 132 0.682 80.148 5.220 1.00 73.43 ATOM 204 CB THR A 132 1.919 79.155 7.998 1.00 79.17 ATOM 205 OG1 THR A 132 1.414 79.947 9.082 1.00 74.47 ATOM 206 CG2 THR A 132 3.031 78.252 8.545 1.00 78.96 ATOM 207 N ASN A 133 1.176 82.090 6.267 1.00 77.61 ATOM 208 CA ASN A 133 0.107 82.876 5.578 1.00 83.58 ATOM 209 C ASN A 133 0.464 83.468 4.191 1.00 90.91 ATOM 210 O ASN A 133 -0.436 83.864 3.433 1.00 88.58 ATOM 211 CB ASN A 133 -0.467 83.981 6.491 1.00 73.65 ATOM 212 CG ASN A 133 0.576 84.975 6.968 1.00 72.21 ATOM 213 OD1 ASN A 133 1.773 84.822 6.735 1.00 66.76 ATOM 214 ND2 ASN A 133 0.115 86.002 7.666 1.00 75.94 ATOM 215 N TYR A 134 1.764 83.536 3.890 1.00 92.97 ATOM 216 CA TYR A 134 2.299 83.958 2.582 1.00 98.59 ATOM 217 C TYR A 134 1.324 83.947 1.382 1.00 96.08 ATOM 218 O TYR A 134 1.031 84.984 0.800 1.00 98.62 ATOM 219 CB TYR A 134 3.516 83.095 2.243 1.00103.60 ATOM 220 CG TYR A 134 4.247 83.524 0.995 1.00110.28 ATOM 221 CD1 TYR A 134 3.799 83.157 -0.276 1.00101.72 ATOM 222 CD2 TYR A 134 5.393 84.296 1.088 1.00114.68 ATOM 223 CE1 TYR A 134 4.472 83.560 -1.412 1.00103.06 ATOM 224 CE2 TYR A 134 6.076 84.700 -0.039 1.00120.04 ATOM 225 CZ TYR A 134 5.616 84.330 -1.284 1.00117.13 ATOM 226 OH TYR A 134 6.322 84.747 -2.388 1.00127.75 ATOM 227 N GLN A 135 0.842 82.776 1.001 1.00 91.43 ATOM 228 CA GLN A 135 0.004 82.658 -0.189 1.00 88.81 ATOM 229 C GLN A 135 -1.406 83.216 0.034 1.00102.27 ATOM 230 O GLN A 135 -2.088 83.605 -0.923 1.00113.94 ATOM 231 CB GLN A 135 -0.043 81.202 -0.658 1.00 83.11 ATOM 232 CG GLN A 135 1.331 80.665 -1.042 1.00 85.40 ATOM 233 CD GLN A 135 1.304 79.249 -1.610 1.00 85.27 ATOM 234 OE1 GLN A 135 0.797 78.318 -0.979 1.00 79.78 ATOM 235 NE2 GLN A 135 1.873 79.078 -2.801 1.00 81.43 ATOM 236 N VAL A 136 -1.852 83.244 1.287 1.00100.48 ATOM 237 CA VAL A 136 -3.036 84.010 1.627 1.00102.74 ATOM 238 C VAL A 136 -2.724 85.482 1.380 1.00100.47 ATOM 239 O VAL A 136 -3.359 86.129 0.553 1.00103.14 ATOM 240 CB VAL A 136 -3.455 83.817 3.094 1.00100.51 ATOM 241 N VAL A 137 -1.704 85.976 2.073 1.00 92.95 ATOM 242 CA VAL A 137 -1.345 87.387 2.069 1.00 86.86 ATOM 243 C VAL A 137 -0.890 87.848 0.683 1.00 91.67 ATOM 244 O VAL A 137 -1.433 88.809 0.147 1.00 90.98 ATOM 245 CB VAL A 137 -0.220 87.652 3.100 1.00 86.15 ATOM 246 CG1 VAL A 137 0.291 89.078 3.029 1.00 84.56 ATOM 247 CG2 VAL A 137 -0.701 87.350 4.511 1.00 86.18 ATOM 248 N CYS A 138 0.097 87.152 0.113 1.00 95.68 ATOM 249 CA CYS A 138 0.754 87.558 -1.140 1.00 90.40 ATOM 250 C CYS A 138 0.276 86.885 -2.439 1.00 84.58 ATOM 251 O CYS A 138 0.813 87.193 -3.483 1.00 88.81 ATOM 252 CB CYS A 138 2.266 87.313 -1.062 1.00 95.34 ATOM 253 SG CYS A 138 3.167 88.001 0.352 1.00110.40 TER